PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1pma
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum Length = 211
>gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum Length = 211
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 10/184 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + + V++A + +V++ +M N +K+ ++ AG DA L+
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTG-MTIAGLVGDAQVLVRY 66
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
++ +LE Y Q + A + L ++ M ++ T V +
Sbjct: 67 MKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGG 126
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
E+ + GSG + + S + + +E + +A+S A + I + +
Sbjct: 127 SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVI 186
Query: 186 KVGD 189
D
Sbjct: 187 TRKD 190