PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1q5q

>gi|40889391|pdb|1Q5Q|H Chain H, The Rhodococcus 20s Proteasome Length = 235
>gi|40889392|pdb|1Q5Q|I Chain I, The Rhodococcus 20s Proteasome Length = 235
>gi|40889393|pdb|1Q5Q|J Chain J, The Rhodococcus 20s Proteasome Length = 235
>gi|40889394|pdb|1Q5Q|K Chain K, The Rhodococcus 20s Proteasome Length = 235
>gi|40889395|pdb|1Q5Q|L Chain L, The Rhodococcus 20s Proteasome Length = 235
>gi|40889396|pdb|1Q5Q|M Chain M, The Rhodococcus 20s Proteasome Length = 235
>gi|40889397|pdb|1Q5Q|N Chain N, The Rhodococcus 20s Proteasome Length = 235
 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 22/184 (11%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ +   G V++AGD + + G  +   +  KV    + +  AG AG++  A  L+   
Sbjct: 1   TTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSA-AGIAGTAGIAIELVRLF 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM----------- 124
             +LE Y            K  R+   +R      +     + L++              
Sbjct: 60  AVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGR 119

Query: 125 -------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICV 174
                  G   E   G  A+GSG  +A SA + + S      +A   A +++  AAD   
Sbjct: 120 IVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDS 179

Query: 175 YTNH 178
            T  
Sbjct: 180 ATGG 183