PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1ryp
>gi|3114271|pdb|1RYP|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 244
>gi|3114285|pdb|1RYP|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 244
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 14/189 (7%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
HA T + + +V+A + +V+ + K+ +L +AG +
Sbjct: 30 HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINT 89
Query: 72 LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
+ L+ Y L+R ++ + + LR + A D+ + T
Sbjct: 90 ARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYT 149
Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
+++G+ S A + + A E+A K +S D T
Sbjct: 150 SNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDR 209
Query: 180 IVLETLKVG 188
+ T++ G
Sbjct: 210 LEFATIRKG 218