PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1ryp
>gi|3114272|pdb|1RYP|D Chain D, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 241
>gi|3114286|pdb|1RYP|R Chain R, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 241
Score = 56.9 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 19/194 (9%)
Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
T + V+ VV+ + + +L + KV ++ +++ F+G +AD+ L+E
Sbjct: 27 RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLS-FSGLNADSRILIE 85
Query: 74 RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
+ + + + L + + + +R LIA +
Sbjct: 86 KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 145
Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTN 177
+ IG + EE + + ++ V T
Sbjct: 146 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEV-VQTG 204
Query: 178 H-NIVLETLKVGDE 190
NI + +K +
Sbjct: 205 AKNIEITVVKPDSD 218