PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1ryp
>gi|3114273|pdb|1RYP|E Chain E, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 242
>gi|3114287|pdb|1RYP|S Chain S, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 242
Score = 45.7 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 18/163 (11%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
+T + + VV+ + + + + + K+ + + A G +
Sbjct: 26 GSTAIGIATKEGVVLGVEKRATS-PLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHA 84
Query: 73 ERLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIAD---KTI 117
Y ++ L +S +LA R +LIA
Sbjct: 85 RTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDG 144
Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ AIGSG A + + + +E
Sbjct: 145 YQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKE 187