PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1ryp
>gi|3114278|pdb|1RYP|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 204
>gi|3114292|pdb|1RYP|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 204
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 56/195 (28%), Gaps = 15/195 (7%)
Query: 8 HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
++ ++ + V IA D ++ + K+ G + G G + D
Sbjct: 1 SDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGH--VFLGITGLATD 58
Query: 68 AFTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTIT 118
TL E K Y + R+ + R Y + +
Sbjct: 59 VTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKP 118
Query: 119 LVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
+ ++ + G+ +L E++ +A+ AAD
Sbjct: 119 FIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDA 178
Query: 175 YTNHNIVLETLKVGD 189
+ V+ +K +
Sbjct: 179 LSGWGAVVYIIKKDE 193