PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1ryp
gi|3114279|pdb|1RYP|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 198
>gi|3114293|pdb|1RYP|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 198
Score = 67.3 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 12/154 (7%)
Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
IL +R V++A V+ G +V+K + K R+L + FAG + D E ++
Sbjct: 4 ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHT-LMSFAGEAGDTVQFAEYIQA 62
Query: 78 KLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADK--TITLVITGMGD 126
++ Y + A + + +I DK +
Sbjct: 63 NIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYL 122
Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
+ E A G G Y S + EE
Sbjct: 123 GTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEE 156