PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1ryp
>gi|3114280|pdb|1RYP|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 212
>gi|3114294|pdb|1RYP|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast At 2.4 Angstroms Resolution Length = 212
Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 62/178 (34%), Gaps = 12/178 (6%)
Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
TT L R G +++A D + + G V ++V + ++ AG +AD L
Sbjct: 1 TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPF-LLGTMAGGAADCQFWETWL 59
Query: 76 EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGDV 127
+ + + A + + + L K + D
Sbjct: 60 GSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDG 119
Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
+ + +GSG ++A + S E+ + ++++ AA Y+ ++ L
Sbjct: 120 TRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 177