PSIBLAST alignment of GI: 254780828 and protein with PDB id: 1ya7
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And Pa700 From The 1.9 A Structure Of A Proteasome-11s Activator Complex Length = 217
>gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And Pa700 From The 1.9 A Structure Of A Proteasome-11s Activator Complex Length = 217
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 10/184 (5%)
Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
TT + + V++A + +V++ +M N +K+ ++ AG DA L+
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTG-MTIAGLVGDAQVLVRY 66
Query: 75 LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
++ +LE Y Q + A + L ++ M ++ T V +
Sbjct: 67 MKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGG 126
Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
E+ + GSG + + S + + +E + +A+S A + I + +
Sbjct: 127 SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVI 186
Query: 186 KVGD 189
D
Sbjct: 187 TRKD 190