BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780828|ref|YP_003065241.1| ATP-dependent protease
peptidase subunit [Candidatus Liberibacter asiaticus str. psy62]
         (190 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254780828|ref|YP_003065241.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040505|gb|ACT57301.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 190

 Score =  202 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG
Sbjct: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV
Sbjct: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
           ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI
Sbjct: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180

Query: 181 VLETLKVGDE 190
           VLETLKVGDE
Sbjct: 181 VLETLKVGDE 190


>gi|312114750|ref|YP_004012346.1| 20S proteasome A and subunit betas [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219879|gb|ADP71247.1| 20S proteasome A and B subunits [Rhodomicrobium vannielii ATCC
           17100]
          Length = 190

 Score =  199 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 131/182 (71%), Positives = 156/182 (85%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TTILTVRK G VVIAGDGQVSLGQTV+KANA+KVR LGKGN+I+GFAG++AD
Sbjct: 9   HDPTGWHGTTILTVRKGGRVVIAGDGQVSLGQTVIKANAKKVRTLGKGNVISGFAGATAD 68

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ERLE KLE YP+QL+R+ V+LAKDWR D+YLR LEAM+++ADK  TLV+TG GDV
Sbjct: 69  AFTLFERLESKLEMYPDQLVRACVDLAKDWRTDRYLRRLEAMMIVADKNATLVLTGTGDV 128

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           LEPE+ +M IGSGG+YALSAARAL+ T  SAE+IARKAM+IAADICVYTN+NI++E+L  
Sbjct: 129 LEPEHAIMGIGSGGNYALSAARALLDTDLSAEDIARKAMAIAADICVYTNNNIIVESLPS 188

Query: 188 GD 189
            D
Sbjct: 189 ND 190


>gi|83594928|ref|YP_428680.1| ATP-dependent protease peptidase subunit [Rhodospirillum rubrum
           ATCC 11170]
 gi|83577842|gb|ABC24393.1| 20S proteasome, A and B subunits [Rhodospirillum rubrum ATCC 11170]
          Length = 187

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 117/181 (64%), Positives = 147/181 (81%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                ++  H TTIL+VRK+G VVIAGDGQV+ G TVMKANARKVR L  G++IAGFAG+
Sbjct: 7   SPSDNSIVWHGTTILSVRKNGKVVIAGDGQVTFGNTVMKANARKVRPLAGGSVIAGFAGA 66

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KLEQYP QL R+ VE+AKDWR D+YLR LEAM+ +ADK ++LV+TG 
Sbjct: 67  TADAFTLFERLETKLEQYPGQLTRACVEMAKDWRTDRYLRRLEAMMAVADKGVSLVLTGT 126

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           GDVLEPE+G++ IGSGG +AL+AARAL+S     E IAR++++IAADIC+YTNHN+ +E 
Sbjct: 127 GDVLEPEDGLIGIGSGGPFALAAARALVSEDLDPEVIARRSLAIAADICIYTNHNLTVEV 186

Query: 185 L 185
           L
Sbjct: 187 L 187


>gi|254470862|ref|ZP_05084265.1| ATP-dependent protease HslV [Pseudovibrio sp. JE062]
 gi|211960004|gb|EEA95201.1| ATP-dependent protease HslV [Pseudovibrio sp. JE062]
          Length = 182

 Score =  195 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 125/182 (68%), Positives = 146/182 (80%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                + H TTILTVRK G VVIAGDGQVSLG TV+K  ARKVR L  G +IAGFAG++A
Sbjct: 1   MSEPEQWHGTTILTVRKGGKVVIAGDGQVSLGSTVIKGTARKVRPLAGGKVIAGFAGATA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE KLEQYPNQL+R+ VE+AKDWR D+YLR LEAM+L+ADK  +LV+TG GD
Sbjct: 61  DAFTLFERLEAKLEQYPNQLMRACVEMAKDWRTDRYLRRLEAMMLVADKKHSLVLTGTGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPENGVM IGSGG++ALSAARAL+    +AEEI RK+M+IAADICVYTN N+ +E L 
Sbjct: 121 VLEPENGVMGIGSGGNFALSAARALVDMDLTAEEICRKSMTIAADICVYTNSNVTVEILD 180

Query: 187 VG 188
             
Sbjct: 181 EE 182


>gi|66824981|ref|XP_645845.1| hypothetical protein DDB_G0269282 [Dictyostelium discoideum AX4]
 gi|60474054|gb|EAL71991.1| hypothetical protein DDB_G0269282 [Dictyostelium discoideum AX4]
          Length = 324

 Score =  194 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 110/184 (59%), Positives = 141/184 (76%), Gaps = 1/184 (0%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               +M ATTIL+VR++G VVI GDGQV+LG +++K NA+K+R+L  G IIAGFAGS AD
Sbjct: 71  SDPYRMKATTILSVRRNGKVVIIGDGQVTLGHSIVKPNAKKIRKLSDGKIIAGFAGSVAD 130

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL E LE+KL ++   LL+S VELA+ WR DKY R LEA +++ADK ITL I G GDV
Sbjct: 131 AFTLFELLERKLTEHRGLLLKSCVELAQQWRTDKYYRRLEASLIVADKDITLNIDGNGDV 190

Query: 128 LEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           LEP +G++AIGSGG +ALSAARAL++      EEIAR++M IAADIC+YTNHN +LE + 
Sbjct: 191 LEPNDGILAIGSGGDFALSAARALLTVPDLDPEEIARRSMKIAADICIYTNHNFILEVID 250

Query: 187 VGDE 190
             +E
Sbjct: 251 SNNE 254


>gi|306842804|ref|ZP_07475444.1| ATP-dependent protease peptidase subunit [Brucella sp. BO2]
 gi|306286998|gb|EFM58509.1| ATP-dependent protease peptidase subunit [Brucella sp. BO2]
          Length = 211

 Score =  194 bits (492), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 136/182 (74%), Positives = 160/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H    ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 30  EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 89

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD  +TL +TG GD
Sbjct: 90  DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 149

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM+IAADIC+YTNHNI++E+L 
Sbjct: 150 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 209

Query: 187 VG 188
             
Sbjct: 210 AQ 211


>gi|115522399|ref|YP_779310.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115516346|gb|ABJ04330.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Rhodopseudomonas palustris BisA53]
          Length = 190

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 125/181 (69%), Positives = 151/181 (83%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      H TTILTVRK G VVI GDGQVS+GQTV+K NA+KVRRLGKG++I GFAG++A
Sbjct: 10  EGSPPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKHNAKKVRRLGKGDVIGGFAGATA 69

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GD
Sbjct: 70  DAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGD 129

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE GVMAIGSGG+YAL+AARAL+ T+  AE I RKA++IAADICVYTN ++ +ETL 
Sbjct: 130 VLEPEAGVMAIGSGGNYALAAARALVDTEQDAEAIVRKALAIAADICVYTNGHVTIETLT 189

Query: 187 V 187
            
Sbjct: 190 S 190


>gi|209364281|ref|YP_001425417.2| ATP-dependent protease peptidase subunit [Coxiella burnetii Dugway
           5J108-111]
 gi|207082214|gb|ABS76743.2| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
           burnetii Dugway 5J108-111]
          Length = 204

 Score =  192 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 107/183 (58%), Positives = 141/183 (77%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           ++   +   TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL  G +IAGFAG +A
Sbjct: 21  ENGVEQFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTA 80

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ER E KLE++   L R++VELAKDWR D+ LR LEA++ +AD   +L+ITG+GD
Sbjct: 81  DAFTLFERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGD 140

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+EPE  +MAIGSGGS+A +AA+AL+ +T+ SA +I  KA++IAADIC+YTN N  +E L
Sbjct: 141 VIEPEQSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNQNFTIEEL 200

Query: 186 KVG 188
              
Sbjct: 201 DSE 203


>gi|90421827|ref|YP_530197.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
           palustris BisB18]
 gi|90103841|gb|ABD85878.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Rhodopseudomonas palustris BisB18]
          Length = 190

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 123/179 (68%), Positives = 150/179 (83%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      H TTILTVRK G VVI GDGQVS+GQTV+K+NARKVR+LGKG++I GFAG++A
Sbjct: 10  EGSPQVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFAGATA 69

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GD
Sbjct: 70  DAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTGTGD 129

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE GVMAIGSGG+YAL+AARAL+ +   AE I R+++ IAADICVYTN N+ +ETL
Sbjct: 130 VLEPEAGVMAIGSGGNYALAAARALIDSDKDAEAIVRRSLDIAADICVYTNRNVTVETL 188


>gi|254418251|ref|ZP_05031975.1| peptidase, T1 family [Brevundimonas sp. BAL3]
 gi|196184428|gb|EDX79404.1| peptidase, T1 family [Brevundimonas sp. BAL3]
          Length = 184

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 118/184 (64%), Positives = 147/184 (79%), Gaps = 2/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M   ++    H TTIL VRK+G  VIAGDGQVS+G T++K  ARKVR L  G ++AGFAG
Sbjct: 1   MTQSNFP-DWHGTTILAVRKNGRTVIAGDGQVSMGPTIVKGAARKVRTLAGGKVLAGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADK+    +TG
Sbjct: 60  ATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKSSIFTVTG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
           +GDVLEPE+GV A+GSGG+YALSAARAL+  T   AE +ARKAM IAA+ICVYTN N+ +
Sbjct: 120 VGDVLEPEHGVAAVGSGGNYALSAARALIEETDLDAEAVARKAMKIAAEICVYTNGNLTV 179

Query: 183 ETLK 186
           ETL+
Sbjct: 180 ETLE 183


>gi|254498811|ref|ZP_05111522.1| ATP-dependent protease peptidase subunit [Legionella drancourtii
           LLAP12]
 gi|254351975|gb|EET10799.1| ATP-dependent protease peptidase subunit [Legionella drancourtii
           LLAP12]
          Length = 182

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 107/178 (60%), Positives = 135/178 (75%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR+   VVI GDGQV+LG TVMK NARKVRRL K  +IAGFAG +ADAFTL
Sbjct: 3   QFRGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKEQVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE +   L+R++VELAKDWR D+ LR LEA++ +AD   +L+ITG GDV+EPE
Sbjct: 63  FERFESKLEMHQGHLVRAAVELAKDWRTDRILRRLEAVLAVADSKSSLIITGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             ++AIGSGG +A +AARALM +T  SA EI RKA++IA DIC+YTN+N+ +E L   
Sbjct: 123 ESLIAIGSGGPFAQAAARALMQNTDLSAVEIVRKALTIAGDICIYTNNNLTIEELNND 180


>gi|62290924|ref|YP_222717.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 1
           str. 9-941]
 gi|82700835|ref|YP_415409.1| ATP-dependent protease peptidase subunit [Brucella melitensis
           biovar Abortus 2308]
 gi|189025137|ref|YP_001935905.1| ATP-dependent protease peptidase subunit [Brucella abortus S19]
 gi|237816431|ref|ZP_04595424.1| ATP-dependent protease hslV [Brucella abortus str. 2308 A]
 gi|254696330|ref|ZP_05158158.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254731246|ref|ZP_05189824.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 4
           str. 292]
 gi|260546186|ref|ZP_05821926.1| pyridine nucleotide-disulphide oxidoreductase [Brucella abortus
           NCTC 8038]
 gi|260758977|ref|ZP_05871325.1| ATP-dependent protease hslV [Brucella abortus bv. 4 str. 292]
 gi|260760701|ref|ZP_05873044.1| ATP-dependent protease hslV [Brucella abortus bv. 2 str. 86/8/59]
 gi|75496073|sp|Q57AH8|HSLV_BRUAB RecName: Full=ATP-dependent protease subunit HslV
 gi|123547310|sp|Q2YQZ3|HSLV_BRUA2 RecName: Full=ATP-dependent protease subunit HslV
 gi|238065812|sp|B2S979|HSLV_BRUA1 RecName: Full=ATP-dependent protease subunit HslV
 gi|62197056|gb|AAX75356.1| HslV, heat shock protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616936|emb|CAJ12037.1| Pyridine nucleotide-disulphide oxidoreductase,
           class-II:Multispecific proteasome protease [Brucella
           melitensis biovar Abortus 2308]
 gi|189020709|gb|ACD73431.1| Pyridine nucleotide-disulphide oxidoreductase, class-II [Brucella
           abortus S19]
 gi|237788498|gb|EEP62713.1| ATP-dependent protease hslV [Brucella abortus str. 2308 A]
 gi|260096293|gb|EEW80169.1| pyridine nucleotide-disulphide oxidoreductase [Brucella abortus
           NCTC 8038]
 gi|260669295|gb|EEX56235.1| ATP-dependent protease hslV [Brucella abortus bv. 4 str. 292]
 gi|260671133|gb|EEX57954.1| ATP-dependent protease hslV [Brucella abortus bv. 2 str. 86/8/59]
          Length = 184

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 136/182 (74%), Positives = 160/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H    ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3   EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGTTA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD  +TL +TG GD
Sbjct: 63  DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM+IAADIC+YTNHNI++E+L 
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182

Query: 187 VG 188
             
Sbjct: 183 AQ 184


>gi|310817175|ref|YP_003965139.1| ATP-dependent HslUV protease [Ketogulonicigenium vulgare Y25]
 gi|308755910|gb|ADO43839.1| ATP-dependent HslUV protease [Ketogulonicigenium vulgare Y25]
          Length = 194

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 122/184 (66%), Positives = 143/184 (77%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGF 61
           M    +    H TTI+ VRK+G VVIAGDGQVSLGQTV+K  ARKVRRL  G   ++ GF
Sbjct: 1   MSQSDFP-GWHGTTIIGVRKNGKVVIAGDGQVSLGQTVIKGTARKVRRLNPGGRPVLVGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE+KLE  P Q+ R+ VELAKDWR DKYL+ LEAM+++ D    LV+
Sbjct: 60  AGSTADAFTLLERLERKLEAAPGQMARACVELAKDWRTDKYLQKLEAMLIVTDGDALLVV 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG+YAL+AARALMST   AE IAR+AMSIAA+ICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAARALMSTDLDAENIARRAMSIAAEICVYTNGNVT 179

Query: 182 LETL 185
           LE L
Sbjct: 180 LEQL 183


>gi|23502928|ref|NP_699055.1| ATP-dependent protease peptidase subunit [Brucella suis 1330]
 gi|161619993|ref|YP_001593880.1| ATP-dependent protease peptidase subunit [Brucella canis ATCC
           23365]
 gi|163844098|ref|YP_001628502.1| ATP-dependent protease peptidase subunit [Brucella suis ATCC 23445]
 gi|225853511|ref|YP_002733744.1| ATP-dependent protease peptidase subunit [Brucella melitensis ATCC
           23457]
 gi|254690213|ref|ZP_05153467.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 6
           str. 870]
 gi|254694703|ref|ZP_05156531.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 3
           str. Tulya]
 gi|254700712|ref|ZP_05162540.1| ATP-dependent protease peptidase subunit [Brucella suis bv. 5 str.
           513]
 gi|254705084|ref|ZP_05166912.1| ATP-dependent protease peptidase subunit [Brucella suis bv. 3 str.
           686]
 gi|254707399|ref|ZP_05169227.1| ATP-dependent protease peptidase subunit [Brucella pinnipedialis
           M163/99/10]
 gi|254709058|ref|ZP_05170869.1| ATP-dependent protease peptidase subunit [Brucella pinnipedialis
           B2/94]
 gi|256030583|ref|ZP_05444197.1| ATP-dependent protease peptidase subunit [Brucella pinnipedialis
           M292/94/1]
 gi|256045684|ref|ZP_05448562.1| ATP-dependent protease peptidase subunit [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256060045|ref|ZP_05450227.1| ATP-dependent protease peptidase subunit [Brucella neotomae 5K33]
 gi|256112405|ref|ZP_05453326.1| ATP-dependent protease peptidase subunit [Brucella melitensis bv. 3
           str. Ether]
 gi|256258468|ref|ZP_05464004.1| ATP-dependent protease peptidase subunit [Brucella abortus bv. 9
           str. C68]
 gi|256263007|ref|ZP_05465539.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
           bv. 2 str. 63/9]
 gi|256370478|ref|YP_003107989.1| ATP-dependent protease peptidase subunit [Brucella microti CCM
           4915]
 gi|260567449|ref|ZP_05837919.1| pyridine nucleotide-disulphide oxidoreductase [Brucella suis bv. 4
           str. 40]
 gi|260755753|ref|ZP_05868101.1| ATP-dependent protease hslV [Brucella abortus bv. 6 str. 870]
 gi|260884779|ref|ZP_05896393.1| ATP-dependent protease hslV [Brucella abortus bv. 9 str. C68]
 gi|261215030|ref|ZP_05929311.1| ATP-dependent protease hslV [Brucella abortus bv. 3 str. Tulya]
 gi|261314886|ref|ZP_05954083.1| ATP-dependent protease hslV [Brucella pinnipedialis M163/99/10]
 gi|261316556|ref|ZP_05955753.1| ATP-dependent protease hslV [Brucella pinnipedialis B2/94]
 gi|261324021|ref|ZP_05963218.1| ATP-dependent protease hslV [Brucella neotomae 5K33]
 gi|261751221|ref|ZP_05994930.1| heat shock protein hslV [Brucella suis bv. 5 str. 513]
 gi|261755786|ref|ZP_05999495.1| ATP-dependent protease hslV [Brucella suis bv. 3 str. 686]
 gi|265987630|ref|ZP_06100187.1| ATP-dependent protease hslV [Brucella pinnipedialis M292/94/1]
 gi|265992105|ref|ZP_06104662.1| ATP-dependent protease hslV [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993842|ref|ZP_06106399.1| ATP-dependent protease hslV [Brucella melitensis bv. 3 str. Ether]
 gi|294851309|ref|ZP_06791982.1| ATP-dependent protease hslV [Brucella sp. NVSL 07-0026]
 gi|297247308|ref|ZP_06931026.1| ATP-dependent protease hslV [Brucella abortus bv. 5 str. B3196]
 gi|306843499|ref|ZP_07476100.1| ATP-dependent protease peptidase subunit [Brucella sp. BO1]
 gi|38258147|sp|Q8FY11|HSLV_BRUSU RecName: Full=ATP-dependent protease subunit HslV
 gi|189043930|sp|A9M9R4|HSLV_BRUC2 RecName: Full=ATP-dependent protease subunit HslV
 gi|189043931|sp|B0CJI0|HSLV_BRUSI RecName: Full=ATP-dependent protease subunit HslV
 gi|254802407|sp|C0RFW8|HSLV_BRUMB RecName: Full=ATP-dependent protease subunit HslV
 gi|23348961|gb|AAN30970.1| heat shock protein HslV [Brucella suis 1330]
 gi|161336804|gb|ABX63109.1| ATP-dependent protease hslV [Brucella canis ATCC 23365]
 gi|163674821|gb|ABY38932.1| ATP-dependent protease hslV [Brucella suis ATCC 23445]
 gi|225641876|gb|ACO01790.1| ATP-dependent protease hslV [Brucella melitensis ATCC 23457]
 gi|256000641|gb|ACU49040.1| ATP-dependent protease peptidase subunit [Brucella microti CCM
           4915]
 gi|260156967|gb|EEW92047.1| pyridine nucleotide-disulphide oxidoreductase [Brucella suis bv. 4
           str. 40]
 gi|260675861|gb|EEX62682.1| ATP-dependent protease hslV [Brucella abortus bv. 6 str. 870]
 gi|260874307|gb|EEX81376.1| ATP-dependent protease hslV [Brucella abortus bv. 9 str. C68]
 gi|260916637|gb|EEX83498.1| ATP-dependent protease hslV [Brucella abortus bv. 3 str. Tulya]
 gi|261295779|gb|EEX99275.1| ATP-dependent protease hslV [Brucella pinnipedialis B2/94]
 gi|261300001|gb|EEY03498.1| ATP-dependent protease hslV [Brucella neotomae 5K33]
 gi|261303912|gb|EEY07409.1| ATP-dependent protease hslV [Brucella pinnipedialis M163/99/10]
 gi|261740974|gb|EEY28900.1| heat shock protein hslV [Brucella suis bv. 5 str. 513]
 gi|261745539|gb|EEY33465.1| ATP-dependent protease hslV [Brucella suis bv. 3 str. 686]
 gi|262764823|gb|EEZ10744.1| ATP-dependent protease hslV [Brucella melitensis bv. 3 str. Ether]
 gi|263003171|gb|EEZ15464.1| ATP-dependent protease hslV [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092880|gb|EEZ17055.1| pyridine nucleotide-disulphide oxidoreductase [Brucella melitensis
           bv. 2 str. 63/9]
 gi|264659827|gb|EEZ30088.1| ATP-dependent protease hslV [Brucella pinnipedialis M292/94/1]
 gi|294819898|gb|EFG36897.1| ATP-dependent protease hslV [Brucella sp. NVSL 07-0026]
 gi|297174477|gb|EFH33824.1| ATP-dependent protease hslV [Brucella abortus bv. 5 str. B3196]
 gi|306276190|gb|EFM57890.1| ATP-dependent protease peptidase subunit [Brucella sp. BO1]
 gi|326410078|gb|ADZ67143.1| ATP-dependent protease peptidase subunit [Brucella melitensis M28]
 gi|326539794|gb|ADZ88009.1| ATP-dependent protease hslV [Brucella melitensis M5-90]
          Length = 184

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 136/182 (74%), Positives = 160/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H    ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3   EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD  +TL +TG GD
Sbjct: 63  DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM+IAADIC+YTNHNI++E+L 
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182

Query: 187 VG 188
             
Sbjct: 183 AQ 184


>gi|212219519|ref|YP_002306306.1| ATP-dependent protease peptidase subunit [Coxiella burnetii
           CbuK_Q154]
 gi|212013781|gb|ACJ21161.1| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
           burnetii CbuK_Q154]
          Length = 204

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 107/183 (58%), Positives = 141/183 (77%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           ++   +   TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL  G +IAGFAG +A
Sbjct: 21  ENGVEQFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTA 80

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ER E KLE++   L R++VELAKDWR D+ LR LEA++ +AD   +L+ITG+GD
Sbjct: 81  DAFTLFERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGD 140

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+EPE  +MAIGSGGS+A +AA+AL+ +T+ SA +I  KA++IAADIC+YTN N  +E L
Sbjct: 141 VIEPEQSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEEL 200

Query: 186 KVG 188
              
Sbjct: 201 DSE 203


>gi|148559699|ref|YP_001259885.1| ATP-dependent protease peptidase subunit [Brucella ovis ATCC 25840]
 gi|166221628|sp|A5VT38|HSLV_BRUO2 RecName: Full=ATP-dependent protease subunit HslV
 gi|148370956|gb|ABQ60935.1| heat shock protein HslV [Brucella ovis ATCC 25840]
          Length = 184

 Score =  190 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 136/182 (74%), Positives = 159/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H    ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3   EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD   TL +TG GD
Sbjct: 63  DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKATLALTGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM+IAADIC+YTNHNI++E+L 
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182

Query: 187 VG 188
             
Sbjct: 183 AQ 184


>gi|52840877|ref|YP_094676.1| ATP-dependent protease peptidase subunit [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54296663|ref|YP_123032.1| ATP-dependent protease peptidase subunit [Legionella pneumophila
           str. Paris]
 gi|148360706|ref|YP_001251913.1| heat shock protein HslVU [Legionella pneumophila str. Corby]
 gi|296106228|ref|YP_003617928.1| heat shock protein [Legionella pneumophila 2300/99 Alcoy]
 gi|81378038|sp|Q5ZXU1|HSLV_LEGPH RecName: Full=ATP-dependent protease subunit HslV
 gi|81601974|sp|Q5X7B1|HSLV_LEGPA RecName: Full=ATP-dependent protease subunit HslV
 gi|166222984|sp|A5IGR7|HSLV_LEGPC RecName: Full=ATP-dependent protease subunit HslV
 gi|52627988|gb|AAU26729.1| heat shock protein, HslVU, proteasome-related peptidase subunit
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|53750448|emb|CAH11842.1| Peptidase component of the HslUV protease (Heat shock protein)
           [Legionella pneumophila str. Paris]
 gi|148282479|gb|ABQ56567.1| heat shock protein, HslVU, proteasome-related peptidase subunit
           [Legionella pneumophila str. Corby]
 gi|158512134|gb|ABW69095.1| ATP-dependent protease peptidase subunit [Legionella pneumophila]
 gi|295648129|gb|ADG23976.1| heat shock protein [Legionella pneumophila 2300/99 Alcoy]
 gi|307609438|emb|CBW98928.1| peptidase component of the HslUV protease [Legionella pneumophila
           130b]
          Length = 182

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 108/178 (60%), Positives = 138/178 (77%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   VVI GDGQV+LG TVMK NARKVRRL K  +IAGFAG +ADAFTL
Sbjct: 3   QFHGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKDKVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE +   L+R++VELAKDWR D+ LR LEA++ +AD   +L+ITG GDV+EPE
Sbjct: 63  FERFEAKLEMHQGHLIRAAVELAKDWRTDRILRRLEAVLAVADSKASLIITGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             ++AIGSGG +A +AARALM +TQ SA+EI +KA++IA DIC+YTN+N+ +E L   
Sbjct: 123 ESLIAIGSGGPFAQAAARALMENTQLSAKEIVQKALTIAGDICIYTNNNLTIEELNDE 180


>gi|239833122|ref|ZP_04681451.1| ATP-dependent protease hslV [Ochrobactrum intermedium LMG 3301]
 gi|239825389|gb|EEQ96957.1| ATP-dependent protease hslV [Ochrobactrum intermedium LMG 3301]
          Length = 184

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 134/182 (73%), Positives = 160/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H+   ++ TTI+TVRK G VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3   EHHPTTIYGTTIVTVRKGGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD  +TL +TG GD
Sbjct: 63  DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE+GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM IAADIC+YTNHN+++E+L 
Sbjct: 123 VLEPEHGVMAIGSGGNYALAAARALVDTDKSAEEIARKAMEIAADICIYTNHNVIVESLD 182

Query: 187 VG 188
             
Sbjct: 183 AE 184


>gi|296533580|ref|ZP_06896148.1| ATP-dependent protease HslVU [Roseomonas cervicalis ATCC 49957]
 gi|296266088|gb|EFH12145.1| ATP-dependent protease HslVU [Roseomonas cervicalis ATCC 49957]
          Length = 196

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 119/182 (65%), Positives = 146/182 (80%), Gaps = 1/182 (0%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
              H  +  H TTIL VRKDG V +AGDGQVSLGQTV+K NARKVRR+  G ++ GFAG+
Sbjct: 15  ASSHDPIGWHGTTILCVRKDGQVAMAGDGQVSLGQTVVKGNARKVRRIANGKVLTGFAGA 74

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTLLERLE KLE++P+QL R++VELAKDWR D+YLR LEA++ +ADK  +L+ITG 
Sbjct: 75  TADAFTLLERLEAKLERFPDQLERAAVELAKDWRTDRYLRRLEALLAVADKDRSLLITGN 134

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLE 183
           GDVLEPE+ ++ IGSGG++AL+AARAL+     SAEEIA+KAM IAA ICVYTN   VLE
Sbjct: 135 GDVLEPEDQIIGIGSGGNFALAAARALIDVDGLSAEEIAKKAMGIAAGICVYTNGRYVLE 194

Query: 184 TL 185
           TL
Sbjct: 195 TL 196


>gi|206890532|ref|YP_002249197.1| ATP-dependent protease HslV [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|238065946|sp|B5YFZ9|HSLV_THEYD RecName: Full=ATP-dependent protease subunit HslV
 gi|206742470|gb|ACI21527.1| ATP-dependent protease HslV [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 177

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  H TT+L V+++  V+IA DGQV++G TV+K NA+K+R+L  G ++ GFAGS+ADAFT
Sbjct: 1   MDFHGTTVLCVKRNDSVIIASDGQVTMGNTVLKHNAKKIRKLYNGQVLTGFAGSTADAFT 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L ER E KLE Y   LLR++VELAKDWR DK LR LEA++++ADK   L+I+G GDV+EP
Sbjct: 61  LFERFEGKLETYKGNLLRAAVELAKDWRTDKILRRLEALLIVADKEHILIISGNGDVIEP 120

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E+ V AIGSGG +A +AA+AL  +T+  A+EIA KAM IA+ IC+YTN+ I+ E L
Sbjct: 121 EDQVAAIGSGGPFAFAAAKALYDNTELPAKEIAIKAMEIASKICIYTNNIIITEEL 176


>gi|189028443|sp|A9KH30|HSLV_COXBN RecName: Full=ATP-dependent protease subunit HslV
          Length = 181

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 107/178 (60%), Positives = 139/178 (78%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL  G +IAGFAG +ADAFTL
Sbjct: 3   QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L R++VELAKDWR D+ LR LEA++ +AD   +L+ITG+GDV+EPE
Sbjct: 63  FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             +MAIGSGGS+A +AA+AL+ +T+ SA +I  KA++IAADIC+YTN N  +E L   
Sbjct: 123 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNQNFTIEELDSE 180


>gi|92115753|ref|YP_575482.1| ATP-dependent protease peptidase subunit [Nitrobacter hamburgensis
           X14]
 gi|122418928|sp|Q1QRX5|HSLV_NITHX RecName: Full=ATP-dependent protease subunit HslV
 gi|91798647|gb|ABE61022.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Nitrobacter hamburgensis X14]
          Length = 184

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 124/184 (67%), Positives = 149/184 (80%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                    H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVR+LGKG++I GFAG+
Sbjct: 1   MQASQPEVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGKGDVIGGFAGA 60

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+L+ADK ++LV+TG 
Sbjct: 61  TADAFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGT 120

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           GDVLEPE GVMAIGSGG+YALSAARAL+ +   AE I R+++ IAADICVYTN N+ +ET
Sbjct: 121 GDVLEPEAGVMAIGSGGNYALSAARALIDSDKDAETIVRRSLDIAADICVYTNRNLTIET 180

Query: 185 LKVG 188
           L   
Sbjct: 181 LSTD 184


>gi|225626460|ref|ZP_03784499.1| ATP-dependent protease hslV [Brucella ceti str. Cudo]
 gi|254718123|ref|ZP_05179934.1| ATP-dependent protease peptidase subunit [Brucella sp. 83/13]
 gi|256158579|ref|ZP_05456469.1| ATP-dependent protease peptidase subunit [Brucella ceti M490/95/1]
 gi|256253990|ref|ZP_05459526.1| ATP-dependent protease peptidase subunit [Brucella ceti B1/94]
 gi|260169489|ref|ZP_05756300.1| ATP-dependent protease peptidase subunit [Brucella sp. F5/99]
 gi|261221130|ref|ZP_05935411.1| ATP-dependent protease hslV [Brucella ceti B1/94]
 gi|261759014|ref|ZP_06002723.1| pyridine nucleotide-disulphide oxidoreductase [Brucella sp. F5/99]
 gi|265983075|ref|ZP_06095810.1| ATP-dependent protease hslV [Brucella sp. 83/13]
 gi|265997090|ref|ZP_06109647.1| ATP-dependent protease hslV [Brucella ceti M490/95/1]
 gi|306839750|ref|ZP_07472552.1| ATP-dependent protease peptidase subunit [Brucella sp. NF 2653]
 gi|225618117|gb|EEH15160.1| ATP-dependent protease hslV [Brucella ceti str. Cudo]
 gi|260919714|gb|EEX86367.1| ATP-dependent protease hslV [Brucella ceti B1/94]
 gi|261738998|gb|EEY26994.1| pyridine nucleotide-disulphide oxidoreductase [Brucella sp. F5/99]
 gi|262551558|gb|EEZ07548.1| ATP-dependent protease hslV [Brucella ceti M490/95/1]
 gi|264661667|gb|EEZ31928.1| ATP-dependent protease hslV [Brucella sp. 83/13]
 gi|306405210|gb|EFM61487.1| ATP-dependent protease peptidase subunit [Brucella sp. NF 2653]
          Length = 184

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 136/182 (74%), Positives = 160/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H    ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3   EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD  +TL +TG GD
Sbjct: 63  DAFTLLERLEAKLEQYPDQLMRTSVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM+IAADIC+YTNHNI++E+L 
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182

Query: 187 VG 188
             
Sbjct: 183 AQ 184


>gi|212213471|ref|YP_002304407.1| ATP-dependent protease peptidase subunit [Coxiella burnetii
           CbuG_Q212]
 gi|215919319|ref|NP_820986.2| ATP-dependent protease peptidase subunit [Coxiella burnetii RSA
           493]
 gi|206584204|gb|AAO91500.2| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
           burnetii RSA 493]
 gi|212011881|gb|ACJ19262.1| ATP-dependent endopeptidase hsl proteolytic subunit [Coxiella
           burnetii CbuG_Q212]
          Length = 204

 Score =  190 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 107/183 (58%), Positives = 141/183 (77%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           ++   +   TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL  G +IAGFAG +A
Sbjct: 21  ENGVEQFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTA 80

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ER E KLE++   L R++VELAKDWR D+ LR LEA++ +AD   +L+ITG+GD
Sbjct: 81  DAFTLFERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGD 140

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+EPE  +MAIGSGGS+A +AA+AL+ +T+ SA +I  KA++IAADIC+YTN N  +E L
Sbjct: 141 VIEPEQSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEEL 200

Query: 186 KVG 188
              
Sbjct: 201 DSE 203


>gi|39933385|ref|NP_945661.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
           palustris CGA009]
 gi|47605596|sp|P61477|HSLV_RHOPA RecName: Full=ATP-dependent protease subunit HslV
 gi|39653010|emb|CAE25752.1| heat shock protein HslV, proteasome-related peptidase subunit
           [Rhodopseudomonas palustris CGA009]
          Length = 189

 Score =  190 bits (482), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 126/178 (70%), Positives = 149/178 (83%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADAF
Sbjct: 12  PPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAF 71

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLE
Sbjct: 72  TLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLE 131

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           PE GVMAIGSGG+YAL+AARAL+ T   AE I RK++ IAADICVYTN N+ LETL  
Sbjct: 132 PEAGVMAIGSGGNYALAAARALIDTDQDAETIVRKSLGIAADICVYTNGNLTLETLTA 189


>gi|148251767|ref|YP_001236352.1| ATP-dependent protease peptidase subunit [Bradyrhizobium sp. BTAi1]
 gi|166221626|sp|A5E8F2|HSLV_BRASB RecName: Full=ATP-dependent protease subunit HslV
 gi|146403940|gb|ABQ32446.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Bradyrhizobium sp. BTAi1]
          Length = 186

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 125/186 (67%), Positives = 150/186 (80%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +    H     H TTILTVRK G VVI GDGQVS+GQTV+K+NARKVR+LGKG++I GFA
Sbjct: 1   MHATSHEPAVWHGTTILTVRKGGRVVIGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+T
Sbjct: 61  GATADAFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLT 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
           G GDVLEPE GVMAIGSGG+YAL+AARAL+ T   AE I R+++ IAADICVYTN NI +
Sbjct: 121 GTGDVLEPEAGVMAIGSGGNYALAAARALIDTDKDAESIVRRSLDIAADICVYTNRNITI 180

Query: 183 ETLKVG 188
           E L   
Sbjct: 181 EALAAE 186


>gi|17988330|ref|NP_540964.1| ATP-dependent protease peptidase subunit [Brucella melitensis bv. 1
           str. 16M]
 gi|260562985|ref|ZP_05833471.1| heat shock protein hslV [Brucella melitensis bv. 1 str. 16M]
 gi|21759172|sp|Q8YE31|HSLV_BRUME RecName: Full=ATP-dependent protease subunit HslV
 gi|17984105|gb|AAL53228.1| heat shock protein hslv [Brucella melitensis bv. 1 str. 16M]
 gi|260153001|gb|EEW88093.1| heat shock protein hslV [Brucella melitensis bv. 1 str. 16M]
          Length = 184

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 135/182 (74%), Positives = 159/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H    ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3   EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLEQYP+QL+R+SVEL KDWR D+YLR LEAM+L+AD  +TL +TG GD
Sbjct: 63  DAFTLLERLEAKLEQYPDQLMRASVELTKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM+IAADIC+YTNHNI++E+L 
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLD 182

Query: 187 VG 188
             
Sbjct: 183 AQ 184


>gi|326403604|ref|YP_004283686.1| ATP-dependent protease subunit HslV [Acidiphilium multivorum
           AIU301]
 gi|325050466|dbj|BAJ80804.1| ATP-dependent protease subunit HslV [Acidiphilium multivorum
           AIU301]
          Length = 183

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 120/183 (65%), Positives = 150/183 (81%), Gaps = 1/183 (0%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M + +  V  H TTIL VR+D  V +AGDGQVSLG TV+K NARKVRR+G GN++AGFAG
Sbjct: 1   MMNTNDPVGWHGTTILCVRRDEQVAMAGDGQVSLGNTVVKGNARKVRRIGNGNVVAGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTLLERLE KLE++PNQL R+ VELAKDWR D+YLR LEAM+ +AD+T    +TG
Sbjct: 61  ATADAFTLLERLEAKLERFPNQLERACVELAKDWRTDRYLRRLEAMMAVADRTHAYTLTG 120

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVL 182
            GDVLEPE+G++AIGSGG+YAL+AARAL+S    +AE+IAR+AM IA DICVYTNH++ +
Sbjct: 121 NGDVLEPEDGIIAIGSGGNYALAAARALISVDGMTAEDIARRAMKIAGDICVYTNHHVTV 180

Query: 183 ETL 185
           E L
Sbjct: 181 EIL 183


>gi|54293624|ref|YP_126039.1| ATP-dependent protease peptidase subunit [Legionella pneumophila
           str. Lens]
 gi|81601493|sp|Q5WYQ9|HSLV_LEGPL RecName: Full=ATP-dependent protease subunit HslV
 gi|53753456|emb|CAH14911.1| Peptidase component of the HslUV protease (Heat shock protein)
           [Legionella pneumophila str. Lens]
          Length = 182

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 107/178 (60%), Positives = 138/178 (77%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   VVI GDGQV+LG TVMK NARKVRRL K  +IAGFAG +ADAFTL
Sbjct: 3   QFHGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKDKVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE +   L+R++VELAKDWR D+ LR LEA++ +AD   +L+ITG GDV+EPE
Sbjct: 63  FERFEAKLEMHQGHLIRAAVELAKDWRTDRILRRLEAVLAVADSKASLIITGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             ++AIGSGG +A +AARALM +TQ SA+EI +K+++IA DIC+YTN+N+ +E L   
Sbjct: 123 ESLIAIGSGGPFAQAAARALMENTQLSAKEIVQKSLTIAGDICIYTNNNLTIEELNDE 180


>gi|53803704|ref|YP_114446.1| ATP-dependent protease peptidase subunit [Methylococcus capsulatus
           str. Bath]
 gi|85542206|sp|Q606K2|HSLV_METCA RecName: Full=ATP-dependent protease subunit HslV
 gi|53757465|gb|AAU91756.1| ATP-dependent protease HslV [Methylococcus capsulatus str. Bath]
          Length = 187

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 103/177 (58%), Positives = 137/177 (77%), Gaps = 1/177 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TTI++VR+   VVI GDGQV+LG TVMK NARKVRRL  G ++AGFAG++ADAFTL 
Sbjct: 4   FHGTTIVSVRRGDQVVIGGDGQVTLGDTVMKGNARKVRRLYNGRVLAGFAGATADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E +LE++   L +++VEL KDWR D+ LR LEA++ IAD   +L+I+G GDV+EPEN
Sbjct: 64  ERFESQLEKHRGNLTKAAVELVKDWRTDRMLRRLEALLAIADDKASLIISGNGDVIEPEN 123

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           G++AIGSGG +A SAARAL+ +T+  A +I  K++ IAADIC+YTN N+ +E L+ G
Sbjct: 124 GLIAIGSGGPFAQSAARALLENTELGARDIVEKSLIIAADICIYTNRNLTIEELETG 180


>gi|316931712|ref|YP_004106694.1| 20S proteasome subunits A/B [Rhodopseudomonas palustris DX-1]
 gi|315599426|gb|ADU41961.1| 20S proteasome A and B subunits [Rhodopseudomonas palustris DX-1]
          Length = 187

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 125/176 (71%), Positives = 149/176 (84%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADAF
Sbjct: 12  PPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAF 71

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLE
Sbjct: 72  TLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLE 131

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           PE GVMAIGSGG+YAL+AARAL+ T   AE I RK++ IAADICVYTN N+ +ETL
Sbjct: 132 PEAGVMAIGSGGNYALAAARALIDTDQDAEAIVRKSLGIAADICVYTNGNLTIETL 187


>gi|315497793|ref|YP_004086597.1| 20S proteasome a and b subunits [Asticcacaulis excentricus CB 48]
 gi|315415805|gb|ADU12446.1| 20S proteasome A and B subunits [Asticcacaulis excentricus CB 48]
          Length = 183

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 120/184 (65%), Positives = 145/184 (78%), Gaps = 1/184 (0%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M DK++    H TTI+ VRK+G  VIAGDGQVS+G T++K  A+KVR L  G +I GFAG
Sbjct: 1   MTDKNFP-NWHGTTIVAVRKNGKTVIAGDGQVSMGPTIVKGGAKKVRTLAGGKVIVGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTLLERLE KLE YP+QL R+ V+LAKDWR D+YLR LEAM+L+ DK   L ITG
Sbjct: 60  ATADAFTLLERLEAKLELYPDQLARACVDLAKDWRTDRYLRRLEAMLLVGDKNHILTITG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           +GDVLEPE+GV AIGSGG+YALSAARAL+  +  AE IARKAM IA DICVYTNH++ LE
Sbjct: 120 VGDVLEPEDGVAAIGSGGTYALSAARALLEYEPDAEIIARKAMQIAGDICVYTNHSVTLE 179

Query: 184 TLKV 187
            L+ 
Sbjct: 180 KLEA 183


>gi|90417287|ref|ZP_01225213.1| Peptidase component of the HslUV protease (Heat shock protein)
           [marine gamma proteobacterium HTCC2207]
 gi|90330872|gb|EAS46135.1| Peptidase component of the HslUV protease (Heat shock protein)
           [marine gamma proteobacterium HTCC2207]
          Length = 181

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 106/178 (59%), Positives = 134/178 (75%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR++G VVI GDGQVSLG TVMK NARKVRRL    +IAGFAG +ADAFTL
Sbjct: 3   QYRGTTILSVRRNGKVVIGGDGQVSLGNTVMKGNARKVRRLYNDKVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLEQ+   L R++VELAKDWR D+ LR LEA++ +AD   +L+ITG GDV++PE
Sbjct: 63  FERFEAKLEQHQGNLTRAAVELAKDWRSDRILRKLEALLAVADSEASLIITGNGDVIQPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           + ++AIGSGG +A SAARAL+ +T+ SA +I  + + IA DIC+YTNHN  LE L   
Sbjct: 123 DDLIAIGSGGPFAQSAARALLDNTEMSARDIVEQGLKIAGDICIYTNHNRTLEELDSN 180


>gi|153008175|ref|YP_001369390.1| ATP-dependent protease peptidase subunit [Ochrobactrum anthropi
           ATCC 49188]
 gi|166222988|sp|A6WX57|HSLV_OCHA4 RecName: Full=ATP-dependent protease subunit HslV
 gi|151560063|gb|ABS13561.1| 20S proteasome A and B subunits [Ochrobactrum anthropi ATCC 49188]
          Length = 184

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 134/182 (73%), Positives = 159/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H+   ++ TTI+TVRK   VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3   EHHPTTIYGTTIVTVRKGNKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+AD  +TL +TG GD
Sbjct: 63  DAFTLLERLEAKLEQYPDQLMRASVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE+GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM IAADIC+YTNHNI++E+L 
Sbjct: 123 VLEPEHGVMAIGSGGNYALAAARALVDTDKSAEEIARKAMDIAADICIYTNHNIIVESLD 182

Query: 187 VG 188
             
Sbjct: 183 AE 184


>gi|254713515|ref|ZP_05175326.1| ATP-dependent protease peptidase subunit [Brucella ceti M644/93/1]
 gi|254716129|ref|ZP_05177940.1| ATP-dependent protease peptidase subunit [Brucella ceti M13/05/1]
 gi|261217899|ref|ZP_05932180.1| ATP-dependent protease hslV [Brucella ceti M13/05/1]
 gi|261321251|ref|ZP_05960448.1| ATP-dependent protease hslV [Brucella ceti M644/93/1]
 gi|260922988|gb|EEX89556.1| ATP-dependent protease hslV [Brucella ceti M13/05/1]
 gi|261293941|gb|EEX97437.1| ATP-dependent protease hslV [Brucella ceti M644/93/1]
          Length = 184

 Score =  189 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 136/182 (74%), Positives = 159/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H    ++ TTI+TVRKDG VVIAGDGQVSLG TVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 3   EHNPTTIYGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLEQYP+QL+R SVELAKDWR D+YLR LEAM+L+AD  +TL +TG GD
Sbjct: 63  DAFTLLERLEAKLEQYPDQLMRVSVELAKDWRTDRYLRKLEAMMLVADSKVTLALTGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM+IAADIC+YTNHNI++E+L 
Sbjct: 123 VLEPEQGVMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESLN 182

Query: 187 VG 188
             
Sbjct: 183 AQ 184


>gi|161831128|ref|YP_001595965.1| ATP-dependent protease peptidase subunit [Coxiella burnetii RSA
           331]
 gi|189028444|sp|A9N9F9|HSLV_COXBR RecName: Full=ATP-dependent protease subunit HslV
 gi|161762995|gb|ABX78637.1| ATP-dependent protease hslV [Coxiella burnetii RSA 331]
          Length = 181

 Score =  189 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 107/178 (60%), Positives = 139/178 (78%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL  G +IAGFAG +ADAFTL
Sbjct: 3   QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L R++VELAKDWR D+ LR LEA++ +AD   +L+ITG+GDV+EPE
Sbjct: 63  FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             +MAIGSGGS+A +AA+AL+ +T+ SA +I  KA++IAADIC+YTN N  +E L   
Sbjct: 123 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEELDSE 180


>gi|153206905|ref|ZP_01945723.1| ATP-dependent protease hslV [Coxiella burnetii 'MSU Goat Q177']
 gi|165918152|ref|ZP_02218238.1| ATP-dependent protease hslV [Coxiella burnetii RSA 334]
 gi|47605679|sp|Q83A95|HSLV_COXBU RecName: Full=ATP-dependent protease subunit HslV
 gi|120576978|gb|EAX33602.1| ATP-dependent protease hslV [Coxiella burnetii 'MSU Goat Q177']
 gi|165918012|gb|EDR36616.1| ATP-dependent protease hslV [Coxiella burnetii RSA 334]
          Length = 181

 Score =  189 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 107/178 (60%), Positives = 139/178 (78%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR++G VVI GDGQVS+G T+MKANARKVRRL  G +IAGFAG +ADAFTL
Sbjct: 3   QFRGTTILSVRRNGKVVIGGDGQVSMGSTIMKANARKVRRLYNGKVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L R++VELAKDWR D+ LR LEA++ +AD   +L+ITG+GDV+EPE
Sbjct: 63  FERFESKLEKHSGNLTRAAVELAKDWRTDRILRRLEALLTVADSKASLIITGLGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             +MAIGSGGS+A +AA+AL+ +T+ SA +I  KA++IAADIC+YTN N  +E L   
Sbjct: 123 QSLMAIGSGGSFAQAAAKALLENTKLSARKIVEKALTIAADICIYTNLNFTIEELDSE 180


>gi|110635820|ref|YP_676028.1| ATP-dependent protease peptidase subunit [Mesorhizobium sp. BNC1]
 gi|123353080|sp|Q11CL2|HSLV_MESSB RecName: Full=ATP-dependent protease subunit HslV
 gi|110286804|gb|ABG64863.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Chelativorans sp. BNC1]
          Length = 182

 Score =  189 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 140/182 (76%), Positives = 159/182 (87%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + MH TTI+TVRK G VVIAGDGQVSLGQTVMK NARKVRR+GKGN+IAGFAG++A
Sbjct: 1   MSDNLTMHGTTIVTVRKGGKVVIAGDGQVSLGQTVMKGNARKVRRIGKGNVIAGFAGATA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLEKKLEQYP+QL+R+SVELAKDWR D+YLR LEAM+L+ADK +TL +TG GD
Sbjct: 61  DAFTLLERLEKKLEQYPDQLMRASVELAKDWRTDRYLRRLEAMMLVADKNVTLALTGTGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPE GVMAIGSGG+YAL+AARAL+ T  SAEEIARKAM IAA ICVYTN NI++ETL 
Sbjct: 121 VLEPEEGVMAIGSGGNYALAAARALIDTDKSAEEIARKAMEIAASICVYTNSNIIVETLD 180

Query: 187 VG 188
            G
Sbjct: 181 AG 182


>gi|329891072|ref|ZP_08269415.1| ATP-dependent protease hslV [Brevundimonas diminuta ATCC 11568]
 gi|328846373|gb|EGF95937.1| ATP-dependent protease hslV [Brevundimonas diminuta ATCC 11568]
          Length = 183

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 119/184 (64%), Positives = 146/184 (79%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M   ++    H TTIL VRK+G  VIAGDGQVS+G T++K  ARKVR L  G ++AGFAG
Sbjct: 1   MSASNFP-DWHGTTILAVRKNGRTVIAGDGQVSMGPTIVKGAARKVRTLANGKVLAGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TL+ERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK   L +TG
Sbjct: 60  ATADALTLIERLEAKLEQYPDQLARACVELAKDWRTDRYLRRLEAMLLVADKDTILTVTG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIV 181
           +GDVLEPE GV A+GSGG+YAL+AARAL+   T+  AE+IARKAM IAADICVYTN N+ 
Sbjct: 120 VGDVLEPEYGVAAVGSGGNYALAAARALIDEHTELDAEQIARKAMKIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E+L
Sbjct: 180 IESL 183


>gi|94496359|ref|ZP_01302936.1| ATP-dependent protease peptidase subunit [Sphingomonas sp. SKA58]
 gi|94424105|gb|EAT09129.1| ATP-dependent protease peptidase subunit [Sphingomonas sp. SKA58]
          Length = 180

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 120/175 (68%), Positives = 149/175 (85%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TTI++VRK+G VV+AGDGQVS+GQTVMK NARKVRRL  G++I GFAG++ADAFTL 
Sbjct: 4   WHGTTIMSVRKNGKVVVAGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLE++  QL+R++VELAKDWR DKYLRNLEAM+++ADK +TL++TG GDVLEP N
Sbjct: 64  ERLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEAMMIVADKDVTLILTGNGDVLEPLN 123

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           GV AIGSGG++AL+AARALM  +  AE +ARKAM++AADICVYTN  + +ETL  
Sbjct: 124 GVAAIGSGGNFALAAARALMDYEQDAEALARKAMAVAADICVYTNDQLTIETLDS 178


>gi|270159287|ref|ZP_06187943.1| ATP-dependent protease HslV [Legionella longbeachae D-4968]
 gi|289165889|ref|YP_003456027.1| Peptidase component of the HslUV protease (Heat shock protein)
           [Legionella longbeachae NSW150]
 gi|269987626|gb|EEZ93881.1| ATP-dependent protease HslV [Legionella longbeachae D-4968]
 gi|288859062|emb|CBJ12991.1| Peptidase component of the HslUV protease (Heat shock protein)
           [Legionella longbeachae NSW150]
          Length = 182

 Score =  188 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 106/175 (60%), Positives = 135/175 (77%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR+   VVI GDGQV+LG TVMK NARKVRRL K  +IAGFAG +ADAFTL
Sbjct: 3   QFRGTTILSVRRGNQVVIGGDGQVTLGNTVMKGNARKVRRLYKDQVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE +   L+R++VELAKDWR D+ LR LEA++ +AD   +L+ITG GDV+EPE
Sbjct: 63  FERFESKLEMHQGHLVRAAVELAKDWRTDRMLRRLEAVLAVADVRSSLIITGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + ++AIGSGG +A +AARAL+ +T  SA EI RKA+ IA DIC+YTN+++ LE L
Sbjct: 123 HSLIAIGSGGPFAQAAARALLENTDLSAMEIVRKALMIAGDICIYTNNHLTLEEL 177


>gi|209883548|ref|YP_002287405.1| ATP-dependent protease HslV [Oligotropha carboxidovorans OM5]
 gi|229486363|sp|B6JAL5|HSLV_OLICO RecName: Full=ATP-dependent protease subunit HslV
 gi|209871744|gb|ACI91540.1| ATP-dependent protease HslV [Oligotropha carboxidovorans OM5]
          Length = 183

 Score =  188 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 123/183 (67%), Positives = 150/183 (81%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                A   H TTILTVRK G VVI GDGQVS+GQTV+K+NARKVR+LGKG++I GFAG+
Sbjct: 1   MQNSQAESWHGTTILTVRKGGRVVIGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFAGA 60

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++ADK ++LV+TG 
Sbjct: 61  TADAFTLFERLEAKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMIVADKEVSLVLTGT 120

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           GDVLEPE+GVMAIGSGG+YAL+AARAL  +++ AE I R+++ IAADICVYTN N+ +E 
Sbjct: 121 GDVLEPEDGVMAIGSGGNYALAAARALSDSEHDAETIVRRSLEIAADICVYTNRNVTIEA 180

Query: 185 LKV 187
           L  
Sbjct: 181 LTA 183


>gi|15963809|ref|NP_384162.1| ATP-dependent protease peptidase subunit [Sinorhizobium meliloti
           1021]
 gi|307310997|ref|ZP_07590642.1| 20S proteasome A and B subunits [Sinorhizobium meliloti BL225C]
 gi|307321945|ref|ZP_07601327.1| 20S proteasome A and B subunits [Sinorhizobium meliloti AK83]
 gi|15072984|emb|CAC41443.1| Probable heat shock protein [Sinorhizobium meliloti 1021]
 gi|306892415|gb|EFN23219.1| 20S proteasome A and B subunits [Sinorhizobium meliloti AK83]
 gi|306899677|gb|EFN30304.1| 20S proteasome A and B subunits [Sinorhizobium meliloti BL225C]
          Length = 185

 Score =  188 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 135/183 (73%), Positives = 160/183 (87%), Gaps = 1/183 (0%)

Query: 7   KHYAV-KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +H     MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG++
Sbjct: 3   EHNPYGTMHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+AD+T+TL ITG G
Sbjct: 63  ADAFTLLERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRTVTLAITGNG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+G +AIGSGG+YA +AARALM +  SAEEIAR+A+ IA DICVYTNHN+V+ETL
Sbjct: 123 DVLEPEHGTIAIGSGGNYAFAAARALMDSDKSAEEIARRALEIAGDICVYTNHNVVVETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|220933248|ref|YP_002512147.1| 20S proteasome A and B subunits [Thioalkalivibrio sp. HL-EbGR7]
 gi|254765620|sp|B8GTA0|HSLV_THISH RecName: Full=ATP-dependent protease subunit HslV
 gi|219994558|gb|ACL71160.1| 20S proteasome A and B subunits [Thioalkalivibrio sp. HL-EbGR7]
          Length = 177

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 100/174 (57%), Positives = 136/174 (78%), Gaps = 1/174 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI+ VR++G V + GDGQV+LG TVMK NARKVRRL    ++AGFAG +ADAFTL
Sbjct: 3   QFRGTTIVCVRRNGRVALGGDGQVTLGNTVMKGNARKVRRLYGDKVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE+Y   L R++VELAKDWR ++ LR LEA++ +ADK  +L+ITG GDV+EPE
Sbjct: 63  FERFEGKLEKYSGNLTRAAVELAKDWRTERALRRLEALLAVADKETSLLITGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           + ++A+GSGG +A +AARAL+ +T+ SA EIA +A++IAADIC+YTN ++ +E 
Sbjct: 123 DNLIAMGSGGPFAQAAARALLDNTELSAREIAERALNIAADICIYTNRHLTIEE 176


>gi|188579891|ref|YP_001923336.1| ATP-dependent protease peptidase subunit [Methylobacterium populi
           BJ001]
 gi|179343389|gb|ACB78801.1| 20S proteasome A and B subunits [Methylobacterium populi BJ001]
          Length = 206

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 122/177 (68%), Positives = 148/177 (83%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG++I GFAG++ADAFTL
Sbjct: 30  QMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGSVIGGFAGATADAFTL 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK ++L+++G GDVLEPE
Sbjct: 90  FERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADKDVSLLLSGSGDVLEPE 149

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            GVMAIGSGG++AL+AARAL   ++ AE I R++M IAA+ICVYTN N+V+E L  G
Sbjct: 150 TGVMAIGSGGNFALAAARALEDGEHDAEAIVRRSMKIAAEICVYTNGNLVIEALDAG 206


>gi|167649009|ref|YP_001686672.1| ATP-dependent protease peptidase subunit [Caulobacter sp. K31]
 gi|189028424|sp|B0T7B0|HSLV_CAUSK RecName: Full=ATP-dependent protease subunit HslV
 gi|167351439|gb|ABZ74174.1| 20S proteasome A and B subunits [Caulobacter sp. K31]
          Length = 187

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 117/187 (62%), Positives = 144/187 (77%), Gaps = 5/187 (2%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M + +     H TTIL VRK+G  VIAGDGQVS+G TV+K NARKVRRL  G ++AGFAG
Sbjct: 1   MQNSNSFPDWHGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+AD      +TG
Sbjct: 61  ATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADADSIFTVTG 120

Query: 124 MGDVLEP-----ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH 178
           +GDVLEP        V AIGSGG+YAL+AA+AL+    +AEEIARKAM IAA+ICVYTN 
Sbjct: 121 VGDVLEPGESTGGGSVAAIGSGGNYALAAAKALIDQDLTAEEIARKAMGIAAEICVYTNG 180

Query: 179 NIVLETL 185
           N+ +E+L
Sbjct: 181 NLTVESL 187


>gi|197103499|ref|YP_002128876.1| heat shock protein HslV [Phenylobacterium zucineum HLK1]
 gi|196476919|gb|ACG76447.1| heat shock protein HslV [Phenylobacterium zucineum HLK1]
          Length = 182

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 113/182 (62%), Positives = 144/182 (79%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +       H TTIL VRK+G  V+AGDGQVS+GQT++K +A+KVRRL  G +IAGFAG
Sbjct: 1   MSNTSTFPDWHGTTILAVRKNGKTVVAGDGQVSMGQTIVKGSAKKVRRLAGGRVIAGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           S+ADAFTL+ERLE KLEQYP QL R+ V+LAKDWR D+YLR LEAM+++A++     +TG
Sbjct: 61  STADAFTLIERLEAKLEQYPEQLARACVDLAKDWRTDRYLRRLEAMLIVANQEQIFTVTG 120

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           +GDVLEPE+GV AIGSGG +AL+AARAL+ T   AE +AR+AM+IAA+ICVYTN  + +E
Sbjct: 121 VGDVLEPEHGVAAIGSGGIFALAAARALVDTDLDAETVARRAMAIAAEICVYTNGELTVE 180

Query: 184 TL 185
            L
Sbjct: 181 AL 182


>gi|281205293|gb|EFA79485.1| Heat shock protein [Polysphondylium pallidum PN500]
          Length = 290

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 111/181 (61%), Positives = 140/181 (77%), Gaps = 1/181 (0%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++  ATTIL+VR+   VVI GDGQVS G +++K NA+K+RRL  G I+AGFAGS ADA
Sbjct: 74  DPMRKKATTILSVRRGNKVVIIGDGQVSQGHSIVKPNAKKIRRLADGKIVAGFAGSVADA 133

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           FTL E LEKKL ++   LL+S VELA+ WR DKY R LEA +++ADK ITL I G GDVL
Sbjct: 134 FTLFELLEKKLTEHRGLLLKSCVELAQQWRTDKYYRRLEASLIVADKDITLNIDGNGDVL 193

Query: 129 EPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           EP +GV+AIGSGG +ALSAARAL++     AEEIAR++M IAADIC+YTNHN +LET+++
Sbjct: 194 EPNDGVLAIGSGGEFALSAARALLTVPDLDAEEIARRSMKIAADICIYTNHNFILETIEI 253

Query: 188 G 188
            
Sbjct: 254 D 254


>gi|148260412|ref|YP_001234539.1| ATP-dependent protease peptidase subunit [Acidiphilium cryptum
           JF-5]
 gi|189043927|sp|A5FYD8|HSLV_ACICJ RecName: Full=ATP-dependent protease subunit HslV
 gi|146402093|gb|ABQ30620.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Acidiphilium cryptum JF-5]
          Length = 182

 Score =  187 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 119/182 (65%), Positives = 149/182 (81%), Gaps = 1/182 (0%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            + +  V  H TTIL VR+D  V +AGDGQVSLG TV+K NARKVRR+G GN++AGFAG+
Sbjct: 1   MNTNDPVGWHGTTILCVRRDEQVAMAGDGQVSLGNTVVKGNARKVRRIGNGNVVAGFAGA 60

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTLLERLE KLE++PNQL R+ VELAKDWR D+YLR LEAM+ +AD+T    +TG 
Sbjct: 61  TADAFTLLERLEAKLERFPNQLERACVELAKDWRTDRYLRRLEAMMAVADRTHAYTLTGN 120

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLE 183
           GDVLEPE+G++AIGSGG+YAL+AARAL+S    +AE+IAR+AM IA DICVYTNH++ +E
Sbjct: 121 GDVLEPEDGIIAIGSGGNYALAAARALISVDGMTAEDIARRAMKIAGDICVYTNHHVTVE 180

Query: 184 TL 185
            L
Sbjct: 181 IL 182


>gi|315122052|ref|YP_004062541.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495454|gb|ADR52053.1| ATP-dependent protease peptidase subunit [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 189

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 155/188 (82%), Positives = 171/188 (90%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M  + + +  VKMHATTILTVRK G+VVIA DGQVS+G TVMK NARKVRRLGKGNIIAG
Sbjct: 1   MSAIVEGNSFVKMHATTILTVRKGGIVVIASDGQVSVGNTVMKGNARKVRRLGKGNIIAG 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAGSSADAFTL+E+LEKKLEQYP QLLR+SVEL KDWR DKYLRNLEAMIL+ADKT+TLV
Sbjct: 61  FAGSSADAFTLVEKLEKKLEQYPGQLLRASVELTKDWRADKYLRNLEAMILVADKTVTLV 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
           ITG GDVLEPE+GVMAIGSGGSYAL+AARALM+TQ SAEEIAR+AMSIAADICVYTNH I
Sbjct: 121 ITGAGDVLEPEHGVMAIGSGGSYALAAARALMNTQKSAEEIAREAMSIAADICVYTNHEI 180

Query: 181 VLETLKVG 188
           +LETL+V 
Sbjct: 181 ILETLEVE 188


>gi|150398456|ref|YP_001328923.1| ATP-dependent protease peptidase subunit [Sinorhizobium medicae
           WSM419]
 gi|189036241|sp|A6UEK8|HSLV_SINMW RecName: Full=ATP-dependent protease subunit HslV
 gi|150029971|gb|ABR62088.1| 20S proteasome A and B subunits [Sinorhizobium medicae WSM419]
          Length = 185

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 136/183 (74%), Positives = 160/183 (87%), Gaps = 1/183 (0%)

Query: 7   KHYAV-KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +H     MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG++
Sbjct: 3   EHNPYGTMHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+AD+++TL ITG G
Sbjct: 63  ADAFTLLERLEVKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRSVTLAITGNG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+G +AIGSGG+YA +AARALM T  SAEEIAR+A+ IA DICVYTNHN+VLETL
Sbjct: 123 DVLEPEHGTIAIGSGGNYAFAAARALMDTDRSAEEIARRALEIAGDICVYTNHNVVLETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|294011679|ref|YP_003545139.1| ATP-dependent HslUV protease peptidase subunit HslV [Sphingobium
           japonicum UT26S]
 gi|292675009|dbj|BAI96527.1| ATP-dependent HslUV protease peptidase subunit HslV [Sphingobium
           japonicum UT26S]
          Length = 188

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 118/186 (63%), Positives = 151/186 (81%), Gaps = 2/186 (1%)

Query: 4   MGDK--HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           M D+        H TTI++VRK+G V++AGDGQVS+GQTVMK NARKVRRL  G++I GF
Sbjct: 1   MNDQRSSSMPVWHGTTIMSVRKNGKVIVAGDGQVSMGQTVMKPNARKVRRLHDGSVIGGF 60

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AG++ADAFTL ERLE KLE++  QL+R++VELAKDWR DKYLRNLEAM+++AD+ +TL++
Sbjct: 61  AGATADAFTLFERLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEAMMIVADREVTLIL 120

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEP  GV AIGSGG++AL+AARAL+  +  AE +ARKAM +AADICVYTN  +V
Sbjct: 121 TGNGDVLEPVGGVAAIGSGGNFALAAARALVEYEEDAETLARKAMKVAADICVYTNDQLV 180

Query: 182 LETLKV 187
           +E L+ 
Sbjct: 181 VEELES 186


>gi|319778978|ref|YP_004129891.1| ATP-dependent protease HslV [Taylorella equigenitalis MCE9]
 gi|317109002|gb|ADU91748.1| ATP-dependent protease HslV [Taylorella equigenitalis MCE9]
          Length = 188

 Score =  187 bits (475), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 104/179 (58%), Positives = 137/179 (76%), Gaps = 1/179 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + HATTIL VRK   V I GDGQV+LG  V+K +ARK+R+L    +++GFAG++ADAFTL
Sbjct: 3   QFHATTILCVRKGDEVAIGGDGQVTLGNVVIKGSARKIRKLYHDKVLSGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   LLR++VEL KDWR D+ LR LEAM+++ADK  TLV+TG GDVLEPE
Sbjct: 63  QERFEAKLEKHQGHLLRAAVELTKDWRTDRVLRRLEAMLIVADKDHTLVLTGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
            GV AIGSGGSYA SAA+AL+ +T  + EEI +K++ IA D+C+YTN N V++ L + +
Sbjct: 123 LGVAAIGSGGSYAQSAAQALLQNTDLTPEEIVKKSLEIAGDLCIYTNQNHVIQKLDIDE 181


>gi|254448912|ref|ZP_05062367.1| ATP-dependent protease HslV [gamma proteobacterium HTCC5015]
 gi|198261449|gb|EDY85739.1| ATP-dependent protease HslV [gamma proteobacterium HTCC5015]
          Length = 177

 Score =  187 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 101/175 (57%), Positives = 133/175 (76%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            +H TTIL V++   VVI GDGQVS+G TVMK NARKVRRL  G ++AGFAG++ADAFTL
Sbjct: 3   SLHGTTILGVQRGDDVVIGGDGQVSMGNTVMKGNARKVRRLYGGRVLAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLEQ+   L R++VELAKDWR DK LRNLEA++++  +   LVI+G GDV+EPE
Sbjct: 63  FEKFEGKLEQHNGNLTRAAVELAKDWRTDKVLRNLEALLIVGSQEGLLVISGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +  +AIGSGG +A SAA+AL  +T+  A E+  +++ IA DICV+TNHN+ +E L
Sbjct: 123 DSFIAIGSGGQFAQSAAKALYENTELGAREVVERSLHIAGDICVFTNHNLTIEEL 177


>gi|75674326|ref|YP_316747.1| ATP-dependent protease peptidase subunit [Nitrobacter winogradskyi
           Nb-255]
 gi|123614341|sp|Q3SWE6|HSLV_NITWN RecName: Full=ATP-dependent protease subunit HslV
 gi|74419196|gb|ABA03395.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Nitrobacter winogradskyi Nb-255]
          Length = 184

 Score =  187 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 123/181 (67%), Positives = 148/181 (81%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                    H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVR+LGKG++I GFAG+
Sbjct: 1   MQASQPETWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGKGDVIGGFAGA 60

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+L+ADK ++LV+TG 
Sbjct: 61  TADAFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGT 120

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           GDVLEPE+GVMAIGSGG+YAL+AARAL+ +   AE I R A+ IAADICVYTN N+ +E 
Sbjct: 121 GDVLEPESGVMAIGSGGNYALAAARALIDSDKDAETIVRSALDIAADICVYTNRNLTIEA 180

Query: 185 L 185
           L
Sbjct: 181 L 181


>gi|121602221|ref|YP_989510.1| ATP-dependent protease peptidase subunit [Bartonella bacilliformis
           KC583]
 gi|120614398|gb|ABM44999.1| peptidase, T1 family [Bartonella bacilliformis KC583]
          Length = 193

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 130/183 (71%), Positives = 154/183 (84%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSS 65
           +H   +M+ TTI+TVRK   VVIAGDGQVSLGQT+MK+NARKVRRLG  G +IAGFAG++
Sbjct: 3   EHKPDRMYGTTIITVRKGSKVVIAGDGQVSLGQTIMKSNARKVRRLGKDGTVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERL  KLEQYPNQL+R+ VELAKDWR D+YLR LEAM+L+ADK  TLV+TG+G
Sbjct: 63  ADAFTLLERLGMKLEQYPNQLMRACVELAKDWRTDRYLRRLEAMMLVADKKTTLVLTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEP++G+MAIGSGG++ALSAARALM     AE IARKAM+IAA+ICVYTN N  +ETL
Sbjct: 123 DVLEPKDGIMAIGSGGNFALSAARALMDMDLDAEAIARKAMNIAAEICVYTNDNFTIETL 182

Query: 186 KVG 188
              
Sbjct: 183 DTE 185


>gi|261346863|ref|ZP_05974507.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
           rustigianii DSM 4541]
 gi|282565043|gb|EFB70578.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
           rustigianii DSM 4541]
          Length = 176

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 133/174 (76%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA SAARAL+ +T  SA+EIA KA+ IA DIC+YTNHN+  E +   
Sbjct: 122 AIGSGGPYAQSAARALLENTDLSAKEIAEKALEIAGDICIYTNHNVNFEEISSK 175


>gi|149187078|ref|ZP_01865384.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. SD-21]
 gi|148829289|gb|EDL47734.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. SD-21]
          Length = 186

 Score =  186 bits (473), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 118/185 (63%), Positives = 148/185 (80%), Gaps = 1/185 (0%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIA 59
           M    ++H  V+ H TTI+ VRK   +V+AGDGQVS+G TVMK NARKVRR+G+G  ++A
Sbjct: 1   MSDQDNRHGLVQWHGTTIIGVRKGDRIVVAGDGQVSMGNTVMKPNARKVRRIGEGGKVVA 60

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
           GFAG++ADAFTL ERLEKKLEQY  QLLR++VEL KDWR DKYLRNLEA++++ADK   L
Sbjct: 61  GFAGATADAFTLFERLEKKLEQYNGQLLRAAVELTKDWRTDKYLRNLEALMIVADKENLL 120

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
           V+TG GDVLEPE G+ AIGSGG+YAL+AA+A+   ++  E IARKAM +AADICV+TN N
Sbjct: 121 VLTGNGDVLEPEGGITAIGSGGNYALAAAKAIAEYEDDPETIARKAMKVAADICVFTNGN 180

Query: 180 IVLET 184
           + LE 
Sbjct: 181 VTLEE 185


>gi|86747530|ref|YP_484026.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
           palustris HaA2]
 gi|86570558|gb|ABD05115.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Rhodopseudomonas palustris HaA2]
          Length = 187

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 128/187 (68%), Positives = 150/187 (80%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M     +      H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I G
Sbjct: 1   MYSAAGESSPQIWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGG 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAG++ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV
Sbjct: 61  FAGATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLV 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
           +TG GDVLEPE GVMAIGSGG+YAL+AARAL  T   AE I RKA+ IAADICVYTN N+
Sbjct: 121 LTGTGDVLEPEYGVMAIGSGGNYALAAARALADTDQDAETIVRKALDIAADICVYTNRNL 180

Query: 181 VLETLKV 187
            LETL  
Sbjct: 181 TLETLTA 187


>gi|163797094|ref|ZP_02191049.1| 20S proteasome, A and B subunits [alpha proteobacterium BAL199]
 gi|159177610|gb|EDP62163.1| 20S proteasome, A and B subunits [alpha proteobacterium BAL199]
          Length = 186

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 115/186 (61%), Positives = 148/186 (79%), Gaps = 1/186 (0%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M    D  +++  H TTIL+VRKDG VV+AGDGQV+ G TVMKA ARKVRRL  G +IAG
Sbjct: 1   MTDSSDNRHSMTWHGTTILSVRKDGRVVVAGDGQVTFGNTVMKAGARKVRRLAGGQVIAG 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAG++ADAFTL ERLE KLEQ+P+QL+R+ VELAKDWR D+YLR LEAM+ + D  ++L+
Sbjct: 61  FAGATADAFTLFERLEAKLEQHPDQLMRACVELAKDWRTDRYLRRLEAMMAVVDPDVSLI 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHN 179
           ++G GDVLEPE+G++ IGSGG++ALSAARAL       AE IAR++M+IAA+IC+YTN  
Sbjct: 121 LSGTGDVLEPEDGLIGIGSGGAFALSAARALADRPDMDAEAIARRSMAIAAEICIYTNDR 180

Query: 180 IVLETL 185
           + LE+L
Sbjct: 181 VTLESL 186


>gi|21759190|sp|Q92TA9|HSLV_RHIME RecName: Full=ATP-dependent protease subunit HslV
          Length = 176

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 134/176 (76%), Positives = 158/176 (89%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG++ADAFTLL
Sbjct: 1   MHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGATADAFTLL 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+AD+T+TL ITG GDVLEPE+
Sbjct: 61  ERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRTVTLAITGNGDVLEPEH 120

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           G +AIGSGG+YA +AARALM +  SAEEIAR+A+ IA DICVYTNHN+V+ETL   
Sbjct: 121 GTIAIGSGGNYAFAAARALMDSDKSAEEIARRALEIAGDICVYTNHNVVVETLDAE 176


>gi|162149055|ref|YP_001603516.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787632|emb|CAP57228.1| ATP-dependent protease hslV [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 211

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 118/189 (62%), Positives = 148/189 (78%), Gaps = 2/189 (1%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGF 61
           +   +H  +  H TTIL VR+   V +AGDGQV+LG TV+K NARKVRR+G   +I+AGF
Sbjct: 16  IHASQHDPIGWHGTTILCVRRGAQVAMAGDGQVTLGATVIKGNARKVRRIGPSNSILAGF 75

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AG++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD+  +  +
Sbjct: 76  AGATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADQERSFTL 135

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNI 180
           TG GDVLEPE+G++AIGSGG+YALSAARAL      SA EIAR+AM IA +ICVYTNH++
Sbjct: 136 TGNGDVLEPEDGIIAIGSGGNYALSAARALADIDGLSAAEIARRAMRIAGEICVYTNHSV 195

Query: 181 VLETLKVGD 189
           +LETL   +
Sbjct: 196 ILETLGPDE 204


>gi|227823915|ref|YP_002827888.1| ATP-dependent protease peptidase subunit [Sinorhizobium fredii
           NGR234]
 gi|254802420|sp|C3MBC6|HSLV_RHISN RecName: Full=ATP-dependent protease subunit HslV
 gi|227342917|gb|ACP27135.1| ATP-dependent protease HslV [Sinorhizobium fredii NGR234]
          Length = 185

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 135/183 (73%), Positives = 160/183 (87%), Gaps = 1/183 (0%)

Query: 7   KHYAV-KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +H     MHATTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRRL KG++IAGFAG++
Sbjct: 3   EHNPYGTMHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R++VELAKDWR +KYLRNLEAM+L+ADK++TL ITG G
Sbjct: 63  ADAFTLLERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADKSVTLAITGNG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+G +AIGSGG+YA +AARALM +  SAEEIAR+A+ IA DICVYTNHN+V+ETL
Sbjct: 123 DVLEPEHGTIAIGSGGNYAFAAARALMDSDKSAEEIARRALQIAGDICVYTNHNVVMETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAD 185


>gi|197287030|ref|YP_002152902.1| ATP-dependent protease peptidase subunit [Proteus mirabilis HI4320]
 gi|227354725|ref|ZP_03839143.1| T01 family HslV component of HslUV peptidase (ClpQ) [Proteus
           mirabilis ATCC 29906]
 gi|238065930|sp|B4F172|HSLV_PROMH RecName: Full=ATP-dependent protease subunit HslV
 gi|194684517|emb|CAR46301.1| ATP-dependent protease HslV (heat shock protein) [Proteus mirabilis
           HI4320]
 gi|227165168|gb|EEI49996.1| T01 family HslV component of HslUV peptidase (ClpQ) [Proteus
           mirabilis ATCC 29906]
          Length = 176

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 101/175 (57%), Positives = 135/175 (77%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETTSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           AIGSGG YA +AARA++ +T  SA EIA KA++IA DIC+YTNHN+  E +   +
Sbjct: 122 AIGSGGPYAQAAARAMLENTDLSAREIAEKALNIAGDICIYTNHNVNFEEISSKE 176


>gi|192288741|ref|YP_001989346.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|192282490|gb|ACE98870.1| 20S proteasome A and B subunits [Rhodopseudomonas palustris TIE-1]
          Length = 189

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 126/178 (70%), Positives = 148/178 (83%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG++ADAF
Sbjct: 12  PPVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGATADAF 71

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG GDVLE
Sbjct: 72  TLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLE 131

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           PE GVMAIGSGG+YAL+AARAL  T   AE I RKA+ IAA+ICVYTN N+ LETL  
Sbjct: 132 PEAGVMAIGSGGNYALAAARALADTDQDAETIVRKALGIAAEICVYTNGNLTLETLTA 189


>gi|240137219|ref|YP_002961688.1| ATP-dependent protease hslV [Methylobacterium extorquens AM1]
 gi|240007185|gb|ACS38411.1| ATP-dependent protease hslV [Methylobacterium extorquens AM1]
          Length = 186

 Score =  186 bits (472), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 125/176 (71%), Positives = 147/176 (83%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 10  QMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGTVIGGFAGATADAFTL 69

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK ++L+++G GDVLEPE
Sbjct: 70  FERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADKEVSLLLSGAGDVLEPE 129

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            GVMAIGSGG+YALSAARAL   +  AE I R++M IAA+ICVYTN N+V+ETL V
Sbjct: 130 TGVMAIGSGGNYALSAARALEDGELDAEAIVRRSMKIAAEICVYTNGNLVIETLDV 185


>gi|114328900|ref|YP_746057.1| ATP-dependent protease peptidase subunit [Granulibacter
           bethesdensis CGDNIH1]
 gi|114317074|gb|ABI63134.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
           [Granulibacter bethesdensis CGDNIH1]
          Length = 212

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 123/188 (65%), Positives = 150/188 (79%), Gaps = 2/188 (1%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAG 63
              H  V  H TTIL VR+   V +AGDGQVSLGQTV+K NARKVRR+G  G ++AGFAG
Sbjct: 25  ASSHDPVGWHGTTILCVRRGDTVTMAGDGQVSLGQTVVKGNARKVRRIGAGGQVLAGFAG 84

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTLLERLE KLE++PNQL R+ VELAKDWR D+YLR LEAM+ +AD+  +  +TG
Sbjct: 85  ATADAFTLLERLEAKLERFPNQLERACVELAKDWRTDRYLRRLEAMMAVADQNRSFTLTG 144

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDVLEPE+G++AIGSGG+YALSAARALM+     AEEIAR+AM IAADICVYTN N+++
Sbjct: 145 NGDVLEPEDGIIAIGSGGNYALSAARALMTVEGLEAEEIARRAMRIAADICVYTNGNVIV 204

Query: 183 ETLKVGDE 190
           ETL+   E
Sbjct: 205 ETLRGEAE 212


>gi|226326795|ref|ZP_03802313.1| hypothetical protein PROPEN_00655 [Proteus penneri ATCC 35198]
 gi|225204632|gb|EEG86986.1| hypothetical protein PROPEN_00655 [Proteus penneri ATCC 35198]
          Length = 176

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/175 (58%), Positives = 134/175 (76%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRKGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENTSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           AIGSGG YA +AARA++ +T+ SA EIA KA+SIA DIC+YTNHN+  E L   +
Sbjct: 122 AIGSGGPYAQAAARAMLENTELSAREIAEKALSIAGDICIYTNHNVNFEELSSKE 176


>gi|163757485|ref|ZP_02164574.1| ATP-dependent protease peptidase subunit [Hoeflea phototrophica
           DFL-43]
 gi|162284987|gb|EDQ35269.1| ATP-dependent protease peptidase subunit [Hoeflea phototrophica
           DFL-43]
          Length = 186

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 133/186 (71%), Positives = 158/186 (84%), Gaps = 1/186 (0%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M + +   +MHATTI+TVRK   VV+AGDGQVSLGQTVMK NARKVRR+G   +++AGFA
Sbjct: 1   MSEHNPFGQMHATTIITVRKGNQVVMAGDGQVSLGQTVMKGNARKVRRIGKDNSVVAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTLLERLE KLEQYP+QL R++VELAKDWR D+YLR LEAM+L+ADKT+TL IT
Sbjct: 61  GATADAFTLLERLEAKLEQYPDQLTRAAVELAKDWRTDRYLRRLEAMMLVADKTVTLAIT 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
           G GDVLEPE+G MAIGSGG+YA +AARALM    SAEEIAR+AM IA DICVYTN NIV+
Sbjct: 121 GNGDVLEPEHGTMAIGSGGNYAYAAARALMDGDKSAEEIARRAMEIAGDICVYTNTNIVI 180

Query: 183 ETLKVG 188
           ETL++ 
Sbjct: 181 ETLELD 186


>gi|268593397|ref|ZP_06127618.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
           rettgeri DSM 1131]
 gi|291311094|gb|EFE51547.1| ATP-dependent protease HslVU, peptidase subunit [Providencia
           rettgeri DSM 1131]
          Length = 176

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA SAARAL+ +T  SA+EIA KA++IA DIC+YTNHN+  E +   
Sbjct: 122 AIGSGGPYAQSAARALLENTDLSAKEIAEKALAIAGDICIYTNHNVNFEEISSK 175


>gi|209545198|ref|YP_002277427.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532875|gb|ACI52812.1| 20S proteasome A and B subunits [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 199

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 118/189 (62%), Positives = 148/189 (78%), Gaps = 2/189 (1%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGF 61
           +   +H  +  H TTIL VR+   V +AGDGQV+LG TV+K NARKVRR+G   +I+AGF
Sbjct: 4   IHASQHDPIGWHGTTILCVRRGAQVAMAGDGQVTLGATVIKGNARKVRRIGPSNSILAGF 63

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AG++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD+  +  +
Sbjct: 64  AGATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADQERSFTL 123

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNI 180
           TG GDVLEPE+G++AIGSGG+YALSAARAL      SA EIAR+AM IA +ICVYTNH++
Sbjct: 124 TGNGDVLEPEDGIIAIGSGGNYALSAARALADIDGLSAAEIARRAMRIAGEICVYTNHSV 183

Query: 181 VLETLKVGD 189
           +LETL   +
Sbjct: 184 ILETLGPDE 192


>gi|212712510|ref|ZP_03320638.1| hypothetical protein PROVALCAL_03605 [Providencia alcalifaciens DSM
           30120]
 gi|212684726|gb|EEB44254.1| hypothetical protein PROVALCAL_03605 [Providencia alcalifaciens DSM
           30120]
          Length = 176

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 133/174 (76%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA SAARAL+ +T  SA EIA KA++IA DIC+YTNHN+  E +   
Sbjct: 122 AIGSGGPYAQSAARALLENTDLSAREIAEKALAIAGDICIYTNHNVNFEEISSK 175


>gi|163850086|ref|YP_001638129.1| ATP-dependent protease peptidase subunit [Methylobacterium
           extorquens PA1]
 gi|254559231|ref|YP_003066326.1| ATP-dependent protease hslV [Methylobacterium extorquens DM4]
 gi|226704545|sp|A9W0F2|HSLV_METEP RecName: Full=ATP-dependent protease subunit HslV
 gi|163661691|gb|ABY29058.1| 20S proteasome A and B subunits [Methylobacterium extorquens PA1]
 gi|254266509|emb|CAX22273.1| ATP-dependent protease hslV [Methylobacterium extorquens DM4]
          Length = 186

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 124/176 (70%), Positives = 146/176 (82%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 10  QMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGTVIGGFAGATADAFTL 69

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK ++L+++G GDVLEPE
Sbjct: 70  FERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADKEVSLLLSGAGDVLEPE 129

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            GVMAIGSGG+YALSAARAL   +  AE I R++M IAA+ICVYTN N+V+ETL  
Sbjct: 130 TGVMAIGSGGNYALSAARALEDGELDAEAIVRRSMKIAAEICVYTNGNLVIETLDA 185


>gi|226938938|ref|YP_002794009.1| ATP-dependent protease peptidase subunit [Laribacter hongkongensis
           HLHK9]
 gi|226713862|gb|ACO73000.1| HslV [Laribacter hongkongensis HLHK9]
          Length = 241

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 104/181 (57%), Positives = 135/181 (74%), Gaps = 1/181 (0%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +H   +   TTI++VR+   V + GDGQV+LG  V+KA ARKVRRL    ++AGFAG +
Sbjct: 61  QEHSMQQFDGTTIVSVRRGNQVALGGDGQVTLGNIVIKATARKVRRLFNDTVLAGFAGGT 120

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTL+ER E KL++Y   L  S++ELAKDWR D+ LR LEAM+++AD   TLVITG G
Sbjct: 121 ADAFTLIERFEAKLQKYQGNLTISAIELAKDWRSDRALRRLEAMLIVADLERTLVITGNG 180

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           DVLEPE G+ AIGSGG+YA SAARAL+ +T+    +I +K++ IA DIC+YTNHN V+ET
Sbjct: 181 DVLEPEQGIAAIGSGGAYAQSAARALLENTELPPADIVKKSLEIAGDICIYTNHNHVIET 240

Query: 185 L 185
           L
Sbjct: 241 L 241


>gi|254490706|ref|ZP_05103891.1| peptidase, T1 family [Methylophaga thiooxidans DMS010]
 gi|224464162|gb|EEF80426.1| peptidase, T1 family [Methylophaga thiooxydans DMS010]
          Length = 181

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 101/178 (56%), Positives = 134/178 (75%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+ R++G VVI GDGQVSLG T+MK NARKVRRL  G +IAGFAG +ADAFTL
Sbjct: 3   QYRGTTILSYRRNGQVVIGGDGQVSLGNTIMKGNARKVRRLYHGKVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L RS++ELAKDWR D+ +R LEA++ +AD+  +L+I+G GDV+EPE
Sbjct: 63  FERFEGKLEKHQGNLTRSALELAKDWRTDRMMRRLEALLAVADEEASLIISGNGDVIEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            G+++IGSGG +   +A   L +T+ SA EI  K ++IAADIC+YTNHN+ +ETL   
Sbjct: 123 QGLISIGSGGPFAQAAATALLQNTELSAREIVEKGLNIAADICIYTNHNLTIETLDTN 180


>gi|307292833|ref|ZP_07572679.1| 20S proteasome A and B subunits [Sphingobium chlorophenolicum L-1]
 gi|306880899|gb|EFN12115.1| 20S proteasome A and B subunits [Sphingobium chlorophenolicum L-1]
          Length = 180

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 117/175 (66%), Positives = 149/175 (85%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TTI++VRK+G V++AGDGQVS+GQTVMK NARKVRRL  G++I GFAG++ADAFTL 
Sbjct: 4   WHGTTIMSVRKNGKVIVAGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGATADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLE++  QL+R++VELAKDWR DKYLRNLEAM+++ADK +TL++TG GDVLEP  
Sbjct: 64  ERLEAKLERHNGQLMRAAVELAKDWRTDKYLRNLEAMMIVADKEVTLILTGNGDVLEPIG 123

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           GV AIGSGG++AL+AARAL+  +  AE +ARKAM++AADICVYTN  +V+E L+ 
Sbjct: 124 GVAAIGSGGNFALAAARALVEYEEDAETLARKAMAVAADICVYTNDQLVVEELES 178


>gi|329114129|ref|ZP_08242891.1| ATP-dependent protease subunit HslV [Acetobacter pomorum DM001]
 gi|326696205|gb|EGE47884.1| ATP-dependent protease subunit HslV [Acetobacter pomorum DM001]
          Length = 199

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 119/192 (61%), Positives = 147/192 (76%), Gaps = 2/192 (1%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIA 59
           +      H  V  H TTIL VR+   V +AGDGQV+LG TV+K NARKVRR+G   NI+A
Sbjct: 4   LHTASSSHDPVGWHGTTILCVRRGAEVAMAGDGQVTLGSTVVKGNARKVRRIGPQDNILA 63

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
           GFAG++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD   + 
Sbjct: 64  GFAGATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADAEHSF 123

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNH 178
            +TG GDVLEPE+G++AIGSGG+YALSAARAL++     AEEI R++M IA DICVYTNH
Sbjct: 124 TLTGNGDVLEPEDGIIAIGSGGNYALSAARALLTVDGLGAEEIVRRSMKIAGDICVYTNH 183

Query: 179 NIVLETLKVGDE 190
           ++ +ETLK   +
Sbjct: 184 SVRVETLKAASD 195


>gi|289207302|ref|YP_003459368.1| 20S proteasome A and subunit betas [Thioalkalivibrio sp. K90mix]
 gi|288942933|gb|ADC70632.1| 20S proteasome A and B subunits [Thioalkalivibrio sp. K90mix]
          Length = 180

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/178 (57%), Positives = 135/178 (75%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI+ VRKDG V + GDGQVSLG TVMK NARKVRR+    I+AGFAG +ADAFTL
Sbjct: 3   QFRGTTIVCVRKDGAVTLGGDGQVSLGNTVMKGNARKVRRVYHDRILAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E  LE++   + R++VELAKDWR D+ LR LEA++ ++D+  + VI+G GDV+EPE
Sbjct: 63  FERFEGMLEKHSGNITRAAVELAKDWRTDRALRRLEALLAVSDRDNSFVISGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           N ++AIGSGG YA ++A+AL+ +T  SA ++  K+++IAADICVYTNHNI LE+L   
Sbjct: 123 NALIAIGSGGPYAQASAQALLQNTDLSARDVVEKSLNIAADICVYTNHNITLESLDAE 180


>gi|183597346|ref|ZP_02958839.1| hypothetical protein PROSTU_00601 [Providencia stuartii ATCC 25827]
 gi|188023371|gb|EDU61411.1| hypothetical protein PROSTU_00601 [Providencia stuartii ATCC 25827]
          Length = 176

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADEHTSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T+ SA EIA KA+SIA DIC+YTNHN+  E +   
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALSIAGDICIYTNHNVNFEEISSK 175


>gi|331005992|ref|ZP_08329335.1| ATP-dependent protease HslV [gamma proteobacterium IMCC1989]
 gi|330420168|gb|EGG94491.1| ATP-dependent protease HslV [gamma proteobacterium IMCC1989]
          Length = 179

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 105/176 (59%), Positives = 138/176 (78%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI++VR++G VVI GDGQVS+G TVMK NARKVRRL    +IAGFAG +ADAFTL
Sbjct: 3   QYRGTTIVSVRRNGKVVIGGDGQVSMGNTVMKGNARKVRRLHNDQVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KL+ +  QL R++VELAK+WR D+ LR LEA++ +A+   +L+ITG GDV++PE
Sbjct: 63  FERFEAKLQAFNGQLTRAAVELAKEWRSDRALRKLEALLAVANHEASLIITGNGDVIQPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + ++AIGSGG YA SAARAL+ +T+  AE I RK+++IA DICVYTNHN  +ETL+
Sbjct: 123 DDLIAIGSGGPYAQSAARALLENTELDAEAITRKSLTIAGDICVYTNHNHTIETLE 178


>gi|291280523|ref|YP_003497358.1| ATP-dependent protease HslVU, peptidase subunit HslV [Deferribacter
           desulfuricans SSM1]
 gi|290755225|dbj|BAI81602.1| ATP-dependent protease HslVU, peptidase subunit HslV [Deferribacter
           desulfuricans SSM1]
          Length = 175

 Score =  185 bits (470), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 100/173 (57%), Positives = 133/173 (76%), Gaps = 1/173 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL V+KDG + + GDGQV+ G TV+K NA+KVR++   ++I GFAGS+ADAFTL+
Sbjct: 2   FKGTTILAVKKDGKIAVGGDGQVTFGHTVLKHNAKKVRKIYNDSVICGFAGSTADAFTLM 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER EKKL +Y  QLLR++VELAKDWR DKYLR LEAM+++ADK    ++TG GDV+EP N
Sbjct: 62  ERFEKKLNEYSGQLLRAAVELAKDWRTDKYLRRLEAMMIVADKNNIYILTGNGDVVEPNN 121

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
            V AIGSGG YA +AA AL+ ++  +A+EI  K++ IAA IC+YTN N+++E 
Sbjct: 122 NVAAIGSGGPYAQAAATALVENSNLTAKEIVEKSLKIAASICIYTNDNLIVEE 174


>gi|218528689|ref|YP_002419505.1| ATP-dependent protease peptidase subunit [Methylobacterium
           chloromethanicum CM4]
 gi|254802418|sp|B7KZ47|HSLV_METC4 RecName: Full=ATP-dependent protease subunit HslV
 gi|218520992|gb|ACK81577.1| 20S proteasome A and B subunits [Methylobacterium chloromethanicum
           CM4]
          Length = 186

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 124/176 (70%), Positives = 145/176 (82%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL
Sbjct: 10  QMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGATADAFTL 69

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+ADK + L+++G GDVLEPE
Sbjct: 70  FERLEAKLEQYPGQLSRACVELTKDWRTDRYLRRLEAMMLVADKEVGLLLSGAGDVLEPE 129

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            GVMAIGSGG+YALSAARAL   +  AE I R++M IAA+ICVYTN N+V+ETL  
Sbjct: 130 TGVMAIGSGGNYALSAARALEDGELDAEAIVRRSMKIAAEICVYTNGNLVIETLDA 185


>gi|258542119|ref|YP_003187552.1| ATP-dependent protease peptidase subunit [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256633197|dbj|BAH99172.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
           [Acetobacter pasteurianus IFO 3283-01]
 gi|256636256|dbj|BAI02225.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
           [Acetobacter pasteurianus IFO 3283-03]
 gi|256639309|dbj|BAI05271.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
           [Acetobacter pasteurianus IFO 3283-07]
 gi|256642365|dbj|BAI08320.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
           [Acetobacter pasteurianus IFO 3283-22]
 gi|256645420|dbj|BAI11368.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
           [Acetobacter pasteurianus IFO 3283-26]
 gi|256648473|dbj|BAI14414.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
           [Acetobacter pasteurianus IFO 3283-32]
 gi|256651526|dbj|BAI17460.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
           [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654517|dbj|BAI20444.1| endopeptidase ATP-dependent hsl proteolytic subunit HslV
           [Acetobacter pasteurianus IFO 3283-12]
          Length = 199

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 119/191 (62%), Positives = 146/191 (76%), Gaps = 2/191 (1%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAG 60
                 H  V  H TTIL VR+   V +AGDGQV+LG TV+K NARKVRR+G   NI+AG
Sbjct: 5   HTASSSHDPVGWHGTTILCVRRGAEVAMAGDGQVTLGSTVVKGNARKVRRIGPQDNILAG 64

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAG++ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD   +  
Sbjct: 65  FAGATADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADAEHSFT 124

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHN 179
           +TG GDVLEPE+G++AIGSGG+YALSAARAL++     AEEI R++M IA DICVYTNH+
Sbjct: 125 LTGNGDVLEPEDGIIAIGSGGNYALSAARALLTVDGLGAEEIVRRSMKIAGDICVYTNHS 184

Query: 180 IVLETLKVGDE 190
           + +ETLK   +
Sbjct: 185 VRVETLKAASD 195


>gi|262277813|ref|ZP_06055606.1| ATP-dependent protease HslVU, peptidase subunit [alpha
           proteobacterium HIMB114]
 gi|262224916|gb|EEY75375.1| ATP-dependent protease HslVU, peptidase subunit [alpha
           proteobacterium HIMB114]
          Length = 183

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 111/183 (60%), Positives = 146/183 (79%), Gaps = 1/183 (0%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M      +  H TTI+ +RK   VV+AGDGQVS+G TVMK+ A+KVR++ K ++IAGFAG
Sbjct: 1   MEQNKDRLDWHGTTIVLIRKGNDVVVAGDGQVSIGNTVMKSTAKKVRKIEKRDVIAGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           S+ADAFTL ERLE KLE++  QL R++VELAKDWR DKYLR LEA++ +ADK  + +I+G
Sbjct: 61  STADAFTLFERLEAKLEKHGGQLTRAAVELAKDWRSDKYLRRLEALMAVADKKNSFIISG 120

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDVLEPE+G++AIGSGG+YAL+AARA++   + +AEEIA+K++ IAADICV+TNHNI  
Sbjct: 121 NGDVLEPEHGIIAIGSGGNYALAAARAMIDDPKKTAEEIAKKSIEIAADICVFTNHNITT 180

Query: 183 ETL 185
           E L
Sbjct: 181 EKL 183


>gi|288818588|ref|YP_003432936.1| ATP-dependent protease [Hydrogenobacter thermophilus TK-6]
 gi|288787988|dbj|BAI69735.1| ATP-dependent protease [Hydrogenobacter thermophilus TK-6]
 gi|308752179|gb|ADO45662.1| 20S proteasome A and B subunits [Hydrogenobacter thermophilus TK-6]
          Length = 177

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 97/175 (55%), Positives = 132/175 (75%), Gaps = 1/175 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + +H+TTIL VR+D   VI GDGQV+LG +V+K  A+K+R+L    ++ GFAGS+AD   
Sbjct: 1   MSLHSTTILAVRRDNTTVIGGDGQVTLGHSVIKHGAKKIRKLYNDRVLVGFAGSAADGLA 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L+ERLE KLE++   L+R+ VELAK+WRMDKYLR LEAM+L+ DK   L+++G GDV+EP
Sbjct: 61  LMERLEAKLEEFRGNLVRACVELAKEWRMDKYLRRLEAMLLVVDKDNMLLLSGNGDVIEP 120

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           +  V+AIGSGG +A SAA AL   T  SAEEI ++A+ IA++IC+YTN N V+E 
Sbjct: 121 DEPVIAIGSGGDFARSAALALYRHTNMSAEEIVKEALKIASEICIYTNSNFVIEK 175


>gi|209551553|ref|YP_002283470.1| ATP-dependent protease peptidase subunit [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|238065933|sp|B5ZV98|HSLV_RHILW RecName: Full=ATP-dependent protease subunit HslV
 gi|209537309|gb|ACI57244.1| 20S proteasome A and B subunits [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 175

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 136/173 (78%), Positives = 156/173 (90%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AARALM T  SAEEIAR+A+ IAADICVYTNHNIV+E+L V 
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALEIAADICVYTNHNIVVESLDVE 174


>gi|27375760|ref|NP_767289.1| ATP-dependent protease peptidase subunit [Bradyrhizobium japonicum
           USDA 110]
 gi|47605692|sp|Q89WM9|HSLV_BRAJA RecName: Full=ATP-dependent protease subunit HslV
 gi|27348898|dbj|BAC45914.1| ATP-dependent protease [Bradyrhizobium japonicum USDA 110]
          Length = 186

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 122/186 (65%), Positives = 153/186 (82%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +   +  +   H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVR+LG+G++I GFA
Sbjct: 1   MQDSQKSSPGWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRKLGRGDVIGGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+T
Sbjct: 61  GATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLT 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
           G GDVLEPE GVMAIGSGG+YAL+AARAL+ T   AE I R+++ IAADICVYTN N+ +
Sbjct: 121 GTGDVLEPEAGVMAIGSGGNYALAAARALLDTDKDAETIVRRSLDIAADICVYTNRNVTI 180

Query: 183 ETLKVG 188
           E+L  G
Sbjct: 181 ESLATG 186


>gi|255263830|ref|ZP_05343172.1| ATP-dependent protease HslV [Thalassiobium sp. R2A62]
 gi|255106165|gb|EET48839.1| ATP-dependent protease HslV [Thalassiobium sp. R2A62]
          Length = 185

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 120/185 (64%), Positives = 144/185 (77%), Gaps = 3/185 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M D  +    H TTI+ V+K G VVIAGDGQVSLGQTV+K  ARKVRRL  G  +++AGF
Sbjct: 1   MADSDFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGHDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D T  LVI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGTDLLVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR L      AE+IAR+AM+IA+DICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHNVAAIGSGGNFALAAARGLYDGDKPAEDIARQAMAIASDICVYTNGNLT 179

Query: 182 LETLK 186
           +E +K
Sbjct: 180 VEVIK 184


>gi|209966552|ref|YP_002299467.1| ATP-dependent protease peptidase subunit [Rhodospirillum centenum
           SW]
 gi|209960018|gb|ACJ00655.1| ATP-dependent protease HslV, putative [Rhodospirillum centenum SW]
          Length = 187

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 117/178 (65%), Positives = 145/178 (81%), Gaps = 1/178 (0%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             V+ H TTIL+VRKDG VVIAGDGQVS+GQT++K+NARKVRRL  G ++AGFAG++ADA
Sbjct: 10  EPVQWHGTTILSVRKDGQVVIAGDGQVSMGQTIIKSNARKVRRLAGGGVMAGFAGATADA 69

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
             L ERLE KLEQ+P QL R+ VE+AKDWR D+YLR LEAM+ +AD+ ++LVITG GDVL
Sbjct: 70  MALFERLEAKLEQHPGQLARACVEMAKDWRTDRYLRRLEAMMAVADRDVSLVITGTGDVL 129

Query: 129 EPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EPE+G++ IGSGG++ALSAARAL+      AE IARKAM IA +ICVYTN +I LE +
Sbjct: 130 EPEDGLIGIGSGGAFALSAARALVDIPGMDAEAIARKAMRIAGEICVYTNASITLEKI 187


>gi|294675592|ref|YP_003576207.1| ATP-dependent protease HslV [Rhodobacter capsulatus SB 1003]
 gi|294474412|gb|ADE83800.1| ATP-dependent protease HslV [Rhodobacter capsulatus SB 1003]
          Length = 185

 Score =  185 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 124/184 (67%), Positives = 145/184 (78%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M D+ +    H TTI+ VRK G VV+AGDGQVSLGQTV+K  ARKVRRL  G   ++AGF
Sbjct: 1   MTDEKFP-GWHGTTIIGVRKGGRVVVAGDGQVSLGQTVIKGTARKVRRLSPGGREVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLEKKLE  P QL R+ VELAKDWR DKYLRNLEAM+++ D     VI
Sbjct: 60  AGSTADAFTLLERLEKKLEAAPGQLARACVELAKDWRTDKYLRNLEAMLIVTDGADLYVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG+YAL+AARALM +   AE IARKAM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNYALAAARALMDSDLDAEAIARKAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E++
Sbjct: 180 VESI 183


>gi|170738606|ref|YP_001767261.1| ATP-dependent protease peptidase subunit [Methylobacterium sp.
           4-46]
 gi|168192880|gb|ACA14827.1| 20S proteasome A and B subunits [Methylobacterium sp. 4-46]
          Length = 176

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 120/175 (68%), Positives = 145/175 (82%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL 
Sbjct: 1   MHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGATADAFTLF 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ + L+++G GDVLEPE 
Sbjct: 61  ERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVGLLLSGSGDVLEPEG 120

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           GVMAIGSGG+YAL+AARAL      AE I R++++IAA+ICVYTN N+V+E+L+ 
Sbjct: 121 GVMAIGSGGNYALAAARALEDQDLDAEAIVRRSLAIAAEICVYTNGNLVIESLEA 175


>gi|148557270|ref|YP_001264852.1| ATP-dependent protease peptidase subunit [Sphingomonas wittichii
           RW1]
 gi|189036242|sp|A5VEJ8|HSLV_SPHWW RecName: Full=ATP-dependent protease subunit HslV
 gi|148502460|gb|ABQ70714.1| 20S proteasome, A and B subunits [Sphingomonas wittichii RW1]
          Length = 183

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 118/176 (67%), Positives = 148/176 (84%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K H TTIL+VRK G VV+ GDGQVS+G TVMK NARKVR+LG G++I GFAG++ADAFTL
Sbjct: 6   KWHGTTILSVRKGGKVVVIGDGQVSMGNTVMKPNARKVRKLGDGSVIGGFAGATADAFTL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            +RLE+KLEQ+  QLLR++VELAKDWR DKYLRNLEAM+++AD+ +TL++TG GDVLEP 
Sbjct: 66  FDRLERKLEQHGGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLILTGNGDVLEPV 125

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            GV AIGSGG++ALSAARAL+  +  AE I RKAM+IAAD+CV+TN ++ +ETL  
Sbjct: 126 GGVAAIGSGGNFALSAARALVDYEADAETICRKAMAIAADLCVFTNDSLTIETLDS 181


>gi|218458684|ref|ZP_03498775.1| ATP-dependent protease peptidase subunit [Rhizobium etli Kim 5]
          Length = 175

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 134/173 (77%), Positives = 155/173 (89%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGTT 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AARALM T  SAEEIAR+A+ IAADICVYTNHN+V+E+L V 
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALEIAADICVYTNHNLVVESLDVE 174


>gi|254502215|ref|ZP_05114366.1| peptidase, T1 family [Labrenzia alexandrii DFL-11]
 gi|222438286|gb|EEE44965.1| peptidase, T1 family [Labrenzia alexandrii DFL-11]
          Length = 186

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 123/186 (66%), Positives = 146/186 (78%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +       H TTI+ VRK G VVIAGDGQVSLGQTV+K  ARKVR L KG +IAGFAG
Sbjct: 1   MSESREPAVWHGTTIMMVRKGGKVVIAGDGQVSLGQTVIKHTARKVRPLAKGEVIAGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK  +LV+TG
Sbjct: 61  ATADAFTLFERLESKLEQYPGQLMRACVELAKDWRTDRYLRKLEAMMLVADKNTSLVLTG 120

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
            GDVLEPE G+M IGSGG+YAL+A RAL  T   AE IARKAM++AA+ICVYTN +I +E
Sbjct: 121 TGDVLEPEGGIMGIGSGGNYALAAGRALAETDFDAETIARKAMAVAAEICVYTNESITVE 180

Query: 184 TLKVGD 189
            L+  +
Sbjct: 181 VLETAE 186


>gi|119505530|ref|ZP_01627602.1| ATP-dependent protease peptidase subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119458639|gb|EAW39742.1| ATP-dependent protease peptidase subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 178

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 107/175 (61%), Positives = 136/175 (77%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+DG V I GDGQVS+G TVMK NARKVRRL + ++IAGFAG +ADAFTL
Sbjct: 3   QFHGTTIVSVRRDGQVAIGGDGQVSMGNTVMKGNARKVRRLYRDSVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E +LE+Y  QL R++VELAK WR ++ LR LEA++ +AD   +L+ITG GDV+EPE
Sbjct: 63  FELFEAQLEKYQGQLTRAAVELAKLWRSERALRRLEALLAVADLDTSLIITGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           N ++AIGSGG YA +AA AL  +T  SAEEI  K++SIA DICV+TNHN  +ETL
Sbjct: 123 NSLIAIGSGGPYAQAAAHALTENTTLSAEEIVTKSLSIAGDICVFTNHNQTIETL 177


>gi|190889690|ref|YP_001976232.1| ATP-dependent heat shock protease HslVU protein, peptidase subunit
           HslV [Rhizobium etli CIAT 652]
 gi|238065932|sp|B3PWI6|HSLV_RHIE6 RecName: Full=ATP-dependent protease subunit HslV
 gi|190694969|gb|ACE89054.1| ATP-dependent heat shock protease HslVU protein, peptidase subunit
           HslV [Rhizobium etli CIAT 652]
          Length = 175

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 134/173 (77%), Positives = 155/173 (89%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG ++AGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVVAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGTT 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AARALM T  SAEEIAR+A+ IAADICVYTNHNIV+E+L V 
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALDIAADICVYTNHNIVVESLDVE 174


>gi|91974896|ref|YP_567555.1| ATP-dependent protease peptidase subunit [Rhodopseudomonas
           palustris BisB5]
 gi|91681352|gb|ABE37654.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Rhodopseudomonas palustris BisB5]
          Length = 193

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 128/181 (70%), Positives = 150/181 (82%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
             +  A   H TTILTVRK G VVI GDGQVS+GQTV+KANA+KVR+LGKG++I GFAG+
Sbjct: 11  SPQGSAQVWHGTTILTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRKLGKGDVIGGFAGA 70

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+TG 
Sbjct: 71  TADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGT 130

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           GDVLEPE GVMAIGSGG+YAL+AARAL  T   AE I RKA+ IAADICVYTN N+ LET
Sbjct: 131 GDVLEPEYGVMAIGSGGNYALAAARALADTDQDAETIVRKALDIAADICVYTNRNLTLET 190

Query: 185 L 185
           L
Sbjct: 191 L 191


>gi|114706594|ref|ZP_01439495.1| ATP-dependent protease peptidase subunit [Fulvimarina pelagi
           HTCC2506]
 gi|114537986|gb|EAU41109.1| ATP-dependent protease peptidase subunit [Fulvimarina pelagi
           HTCC2506]
          Length = 185

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 127/185 (68%), Positives = 160/185 (86%), Gaps = 1/185 (0%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFA 62
           M D H   +M+ TTI+TVRK+G VV+AGDGQVSLG T++K NARKVRR+GK G +IAGFA
Sbjct: 1   MMDSHKPDQMYGTTIVTVRKNGSVVVAGDGQVSLGNTMIKGNARKVRRIGKQGQVIAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+++ADKT+TL +T
Sbjct: 61  GATADAFTLLERLEGKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMIVADKTVTLTLT 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
           G GDVLEPE GVMAIGSGG+YAL+AA+AL  T+ SAEEIAR+AM IA++IC+YTN +I++
Sbjct: 121 GNGDVLEPEEGVMAIGSGGNYALAAAKALAETEYSAEEIARRAMKIASEICIYTNDSIIV 180

Query: 183 ETLKV 187
           E ++ 
Sbjct: 181 EKIER 185


>gi|21328718|gb|AAM48724.1| heat shock protein HslV [uncultured marine proteobacterium]
          Length = 185

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 116/184 (63%), Positives = 143/184 (77%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M D ++    H TTI+ VRK   VV+AGDGQVSLG TV+K +ARKVRRL  G  +++ GF
Sbjct: 1   MRDTNFP-GWHGTTIIGVRKGTQVVVAGDGQVSLGPTVIKGSARKVRRLSPGGNDVVVGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+ VELAKDWR DKYL+ LEAM+++ D    L+I
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGAELLII 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+G+ AIGSGG++AL+AAR L  T  +AEEIARKAM+IA+DICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHGIAAIGSGGNFALAAARGLQETDLNAEEIARKAMAIASDICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VEVI 183


>gi|327395731|dbj|BAK13153.1| ATP-dependent protease HslV HslV [Pantoea ananatis AJ13355]
          Length = 195

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 96/174 (55%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 21  TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 80

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN ++
Sbjct: 81  ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPENDLI 140

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +++  A +I  K+++IA DIC+YTNHN+  E L   
Sbjct: 141 AIGSGGPYAQAAARALLENSELGARDIVEKSLNIAGDICIYTNHNVNFEELTSK 194


>gi|295691593|ref|YP_003595286.1| 20S proteasome subunits A/b [Caulobacter segnis ATCC 21756]
 gi|295433496|gb|ADG12668.1| 20S proteasome A and B subunits [Caulobacter segnis ATCC 21756]
          Length = 188

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 118/188 (62%), Positives = 145/188 (77%), Gaps = 5/188 (2%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           + G+       H TTIL VRK+G  VIAGDGQVS+G TV+K NARKVRRL  G ++AGFA
Sbjct: 1   MQGNNSTFPDWHGTTILAVRKNGQTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+AD T    +T
Sbjct: 61  GATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADNTAIYTVT 120

Query: 123 GMGDVLEPENG-----VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
           G+GDVLEP        V AIGSGG+YAL+AA+AL+    SAE+IARKAM IAA+ICVYTN
Sbjct: 121 GVGDVLEPGESVGGGAVAAIGSGGNYALAAAKALIDQDLSAEDIARKAMGIAAEICVYTN 180

Query: 178 HNIVLETL 185
            N+ +E+L
Sbjct: 181 GNLTVESL 188


>gi|218508804|ref|ZP_03506682.1| ATP-dependent protease peptidase subunit [Rhizobium etli Brasil 5]
          Length = 175

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 135/173 (78%), Positives = 155/173 (89%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGTT 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AARALM T  SAEEIAR+A+ IAADICVYTNHNIV+E+L V 
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALDIAADICVYTNHNIVVESLDVE 174


>gi|254787488|ref|YP_003074917.1| ATP-dependent protease peptidase subunit [Teredinibacter turnerae
           T7901]
 gi|259491398|sp|C5BRK9|HSLV_TERTT RecName: Full=ATP-dependent protease subunit HslV
 gi|237685056|gb|ACR12320.1| ATP-dependent protease HslVU, peptidase subunit [Teredinibacter
           turnerae T7901]
          Length = 179

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 106/176 (60%), Positives = 139/176 (78%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL++R+   VVI GDGQVSLG T+MK NARKVRRL K  +IAGFAG +ADAFTL
Sbjct: 3   QYRGTTILSIRRGNQVVIGGDGQVSLGNTIMKGNARKVRRLYKNQVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE +  QL+R++VELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PE
Sbjct: 63  FERFEAKLESHGGQLVRAAVELAKDWRTDRALRRLEALLAVADKEASLIITGNGDVIQPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + ++AIGSGG++A SAARAL+ +T+ SA EI +K ++IA DIC+YTNHN  +E L+
Sbjct: 123 DDLIAIGSGGAFAQSAARALLDNTELSAREIVQKGLTIAGDICIYTNHNQTIEELE 178


>gi|288959725|ref|YP_003450066.1| ATP-dependent HslUV protease, peptidase subunit [Azospirillum sp.
           B510]
 gi|288912033|dbj|BAI73522.1| ATP-dependent HslUV protease, peptidase subunit [Azospirillum sp.
           B510]
          Length = 221

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 122/182 (67%), Positives = 147/182 (80%), Gaps = 1/182 (0%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            + H  ++ H TTIL+VRK+G VVIAGDGQVS+G TVMKANARKVR L  G ++AGFAG+
Sbjct: 40  SNPHDPIQWHGTTILSVRKNGQVVIAGDGQVSVGPTVMKANARKVRWLAGGTVMAGFAGA 99

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADA TL ERLE KLEQYP QL R+ VE+AKDWR D+YLR LEAM+ +ADK+++LV+TG 
Sbjct: 100 TADAMTLFERLEGKLEQYPGQLTRACVEMAKDWRTDRYLRRLEAMMAVADKSVSLVLTGN 159

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLE 183
           GDVLEPE+G++ IGSGGSYALSAARAL+      AE +ARKAM IAA ICVYTN N+ LE
Sbjct: 160 GDVLEPEDGLIGIGSGGSYALSAARALIDIDGMEAEAVARKAMKIAAGICVYTNENVTLE 219

Query: 184 TL 185
            L
Sbjct: 220 KL 221


>gi|291619408|ref|YP_003522150.1| HslV [Pantoea ananatis LMG 20103]
 gi|291154438|gb|ADD79022.1| HslV [Pantoea ananatis LMG 20103]
          Length = 209

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 96/174 (55%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 35  TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 94

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN ++
Sbjct: 95  ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPENDLI 154

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +++  A +I  K+++IA DIC+YTNHN+  E L   
Sbjct: 155 AIGSGGPYAQAAARALLENSELGARDIVEKSLNIAGDICIYTNHNVNFEELTSK 208


>gi|221641022|ref|YP_002527284.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
           KD131]
 gi|254802421|sp|B9KRG9|HSLV_RHOSK RecName: Full=ATP-dependent protease subunit HslV
 gi|221161803|gb|ACM02783.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Rhodobacter sphaeroides KD131]
          Length = 185

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 124/184 (67%), Positives = 148/184 (80%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M ++ +    H TTIL VR+ G VV+AGDGQVSLGQTV+K  ARKVRRL  G   ++AGF
Sbjct: 1   MAEERFP-GWHGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLEKKLE  P QL R+ VELAKDWRMDKYLRNLEAM+++ D    LV+
Sbjct: 60  AGSTADAFTLLERLEKKLEAAPGQLARACVELAKDWRMDKYLRNLEAMLIVTDGETLLVL 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR LM+T+  AEEIARKAM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMATELPAEEIARKAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VERI 183


>gi|114319230|ref|YP_740913.1| ATP-dependent protease peptidase subunit [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|122312756|sp|Q0ACL4|HSLV_ALHEH RecName: Full=ATP-dependent protease subunit HslV
 gi|114225624|gb|ABI55423.1| HslV component of HslUV peptidase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 183

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 103/180 (57%), Positives = 133/180 (73%), Gaps = 1/180 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL  R+DG VVI GDGQV+LG TVMK NARKVRRL  G ++AGFAG +ADAFTL
Sbjct: 3   QFRGTTILAARRDGQVVIGGDGQVTLGHTVMKGNARKVRRLHNGRVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E +LE+Y   L R++VE+AKDWR D+ LR LEA++++AD+   LVI+G GDV++PE
Sbjct: 63  FERFEGQLEKYRGNLTRAAVEMAKDWRSDRVLRRLEALLIVADREAMLVISGNGDVIDPE 122

Query: 132 NGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           + ++AIGSGG YA +AA ALM   Q SA E+  +A+ IA DIC+YTN N+ +E L    E
Sbjct: 123 DDLVAIGSGGPYAQAAATALMRHSQLSARELVEQALGIAGDICIYTNRNLSIEELGPDSE 182


>gi|217076580|ref|YP_002334296.1| ATP-dependent protease peptidase subunit [Thermosipho africanus
           TCF52B]
 gi|226704548|sp|B7IFU1|HSLV_THEAB RecName: Full=ATP-dependent protease subunit HslV
 gi|217036433|gb|ACJ74955.1| heat shock protein HslV [Thermosipho africanus TCF52B]
          Length = 176

 Score =  184 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 88/176 (50%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +K  +TT++ VR++  VV+  DGQV+ G T++K NA+KVR++G GN++AGFAGS ADA  
Sbjct: 1   MKWRSTTVVCVRRNDSVVMISDGQVTYGNTILKGNAKKVRKMGDGNVLAGFAGSVADAMA 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +R E K  ++   LL+++VELAKDWR D+ LR LEAM+L+ADK  T +++G G+V++P
Sbjct: 61  LFDRFEAKYREWGGNLLKAAVELAKDWRTDRVLRRLEAMLLVADKKYTFIVSGTGEVIQP 120

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E+ + +IGSG  YA++A +AL+  T  SA+EIA +A+ IA++IC+YTN N  +E L
Sbjct: 121 EDDIASIGSGSPYAIAAGKALLRHTDLSAKEIALEAIKIASEICIYTNDNFTIEEL 176


>gi|221236779|ref|YP_002519216.1| ATP-dependent protease peptidase subunit [Caulobacter crescentus
           NA1000]
 gi|220965952|gb|ACL97308.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
           [Caulobacter crescentus NA1000]
          Length = 200

 Score =  184 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 117/188 (62%), Positives = 144/188 (76%), Gaps = 5/188 (2%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +  +       H TTIL VRK+G  VIAGDGQVS+G TV+K NARKVRRL  G ++AGFA
Sbjct: 13  MQSNSSSFPDWHGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFA 72

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADKT    +T
Sbjct: 73  GATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKTAIYTVT 132

Query: 123 GMGDVLEPENG-----VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
           G+GDVLEP        V AIGSGG+YAL+A +AL+    SAE+IARKAM IAA+ICVYTN
Sbjct: 133 GVGDVLEPGESLGGGAVAAIGSGGNYALAAGKALIDLDLSAEDIARKAMGIAAEICVYTN 192

Query: 178 HNIVLETL 185
            N+ +E+L
Sbjct: 193 GNLTVESL 200


>gi|269103959|ref|ZP_06156656.1| ATP-dependent protease HslV [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163857|gb|EEZ42353.1| ATP-dependent protease HslV [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 175

 Score =  184 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   LL+++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLLKAAVELAKDWRTDRMLRKLEALLAVADETGSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG++A +AARAL+ +T   A EIA K+++IA DICV+TNH+  +E L 
Sbjct: 122 AIGSGGNFAQAAARALLENTDLDAREIAEKSLNIAGDICVFTNHHHTIEELD 173


>gi|109900489|ref|YP_663744.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas
           atlantica T6c]
 gi|123064030|sp|Q15N48|HSLV_PSEA6 RecName: Full=ATP-dependent protease subunit HslV
 gi|109702770|gb|ABG42690.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Pseudoalteromonas atlantica T6c]
          Length = 174

 Score =  184 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VVIAGDGQVSLG TVMK NA+KVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGNQVVIAGDGQVSLGNTVMKGNAKKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L R++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PEN ++
Sbjct: 62  ESKLEIHQGNLTRAAVELAKDWRTDRMLRKLEALLAVADETASFIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG +A +AA AL+ +T+ SAEEIA KA++IA +ICV+TNHN  +E + 
Sbjct: 122 AIGSGGPFAQAAASALLDNTELSAEEIAEKALTIAGNICVFTNHNHTVEKID 173


>gi|329894772|ref|ZP_08270573.1| ATP-dependent protease HslV [gamma proteobacterium IMCC3088]
 gi|328922761|gb|EGG30094.1| ATP-dependent protease HslV [gamma proteobacterium IMCC3088]
          Length = 179

 Score =  184 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI+ VR+D  VVIAGDGQVS+G TVMK NARKVRRL K  +IAGFAG +ADAFTL
Sbjct: 3   QFRGTTIVCVRRDNQVVIAGDGQVSMGNTVMKGNARKVRRLYKDQVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E +L+++   L+R++V LAK WR ++ LR LEA++ +ADK  +LVI+G GDV+EPE
Sbjct: 63  FELFEAQLDKHHGHLVRAAVALAKAWRTERSLRQLEALLAVADKETSLVISGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           N ++AIGSGG +A SAARAL+ +T+ SA ++A KA++IA DIC+YTNH+  +E + 
Sbjct: 123 NNLIAIGSGGPFAQSAARALLDNTELSAHDVATKALTIAGDICIYTNHHHTVEIID 178


>gi|328545936|ref|YP_004306045.1| ATP-dependent protease subunit HslV [polymorphum gilvum
           SL003B-26A1]
 gi|326415676|gb|ADZ72739.1| ATP-dependent protease subunit HslV [Polymorphum gilvum
           SL003B-26A1]
          Length = 186

 Score =  184 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 128/185 (69%), Positives = 150/185 (81%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  +H     H TTIL VRKDG VVIAGDGQVSLGQTV+K  ARKVR L KG +I GFAG
Sbjct: 1   MSAEHGPAVWHGTTILMVRKDGRVVIAGDGQVSLGQTVIKNTARKVRPLAKGEVIGGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK+++LV+TG
Sbjct: 61  ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKSVSLVLTG 120

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
            GDVLEPE GVM IGSGG+YAL+AARAL+     AE IAR+AM+IAADICVYTN NI++E
Sbjct: 121 TGDVLEPEGGVMGIGSGGNYALAAARALIDGDLDAEAIARRAMTIAADICVYTNGNILVE 180

Query: 184 TLKVG 188
           +L   
Sbjct: 181 SLASD 185


>gi|126460958|ref|YP_001042072.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
           ATCC 17029]
 gi|189036233|sp|A3PG34|HSLV_RHOS1 RecName: Full=ATP-dependent protease subunit HslV
 gi|126102622|gb|ABN75300.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Rhodobacter sphaeroides ATCC 17029]
          Length = 185

 Score =  184 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 123/184 (66%), Positives = 146/184 (79%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M +  +    H TTIL VR+ G VV+AGDGQVSLGQTV+K  ARKVRRL  G   ++AGF
Sbjct: 1   MAEDRFP-GWHGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLEKKLE  P QL R+ V+LAKDWRMDKYLRNLEAM+++ D    LV+
Sbjct: 60  AGSTADAFTLLERLEKKLEAAPGQLARACVQLAKDWRMDKYLRNLEAMLIVTDGETLLVL 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR LM+T   AEEIARKAM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMATDLPAEEIARKAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VERI 183


>gi|327189985|gb|EGE57107.1| ATP-dependent protease peptidase subunit [Rhizobium etli CNPAF512]
          Length = 175

 Score =  184 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 136/173 (78%), Positives = 156/173 (90%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AARALM T  SAEEIAR+A+ IAADICVYTNHNIV+E+L V 
Sbjct: 122 AIGSGGNFAFAAARALMDTDKSAEEIARRALDIAADICVYTNHNIVVESLDVE 174


>gi|260460978|ref|ZP_05809227.1| 20S proteasome A and B subunits [Mesorhizobium opportunistum
           WSM2075]
 gi|259033012|gb|EEW34274.1| 20S proteasome A and B subunits [Mesorhizobium opportunistum
           WSM2075]
          Length = 183

 Score =  184 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 136/183 (74%), Positives = 158/183 (86%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
               + MHATTI+TVRK   VVIAGDGQVSLGQT+MK NARKVRR+GKG N+IAGFAG++
Sbjct: 1   MSDNLTMHATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNARKVRRIGKGGNVIAGFAGAT 60

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK+++L +TG G
Sbjct: 61  ADAFTLLERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTG 120

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+GVMAIGSGG+YAL+AARALM T   AEEIARKAM IA+DICVYTN+N V+ETL
Sbjct: 121 DVLEPEHGVMAIGSGGNYALAAARALMDTDKDAEEIARKAMQIASDICVYTNNNFVVETL 180

Query: 186 KVG 188
             G
Sbjct: 181 DAG 183


>gi|16127957|ref|NP_422521.1| ATP-dependent protease peptidase subunit [Caulobacter crescentus
           CB15]
 gi|21759201|sp|Q9A239|HSLV_CAUCR RecName: Full=ATP-dependent protease subunit HslV
 gi|13425497|gb|AAK25689.1| heat shock protein HslV [Caulobacter crescentus CB15]
          Length = 188

 Score =  184 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 117/188 (62%), Positives = 144/188 (76%), Gaps = 5/188 (2%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +  +       H TTIL VRK+G  VIAGDGQVS+G TV+K NARKVRRL  G ++AGFA
Sbjct: 1   MQSNSSSFPDWHGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL+ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADKT    +T
Sbjct: 61  GATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKTAIYTVT 120

Query: 123 GMGDVLEPENG-----VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
           G+GDVLEP        V AIGSGG+YAL+A +AL+    SAE+IARKAM IAA+ICVYTN
Sbjct: 121 GVGDVLEPGESLGGGAVAAIGSGGNYALAAGKALIDLDLSAEDIARKAMGIAAEICVYTN 180

Query: 178 HNIVLETL 185
            N+ +E+L
Sbjct: 181 GNLTVESL 188


>gi|154251692|ref|YP_001412516.1| ATP-dependent protease peptidase subunit [Parvibaculum
           lavamentivorans DS-1]
 gi|189028454|sp|A7HSH6|HSLV_PARL1 RecName: Full=ATP-dependent protease subunit HslV
 gi|154155642|gb|ABS62859.1| 20S proteasome A and B subunits [Parvibaculum lavamentivorans DS-1]
          Length = 182

 Score =  184 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 123/180 (68%), Positives = 149/180 (82%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           +  +  H TTILTVRK G VVIAGDGQVS+G T+MK NARKVR LGKG++IAGFAG++AD
Sbjct: 3   NDPINWHGTTILTVRKGGKVVIAGDGQVSMGDTIMKGNARKVRPLGKGDVIAGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           A TL ERLE K+EQYP QL R+ VELAKDWR D++LR LEA++++ADK  TLV+TG GDV
Sbjct: 63  AMTLFERLEAKIEQYPGQLTRACVELAKDWRTDRFLRRLEALMIVADKEATLVLTGNGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           LEPE+GV+ IGSGG+YAL+AARAL+    SAEEIARKAM IAA ICVYTN+N+ +E+L  
Sbjct: 123 LEPESGVVGIGSGGNYALAAARALIDMDLSAEEIARKAMGIAASICVYTNNNLTVESLDA 182


>gi|288942672|ref|YP_003444912.1| 20S proteasome subunits A/B [Allochromatium vinosum DSM 180]
 gi|288898044|gb|ADC63880.1| 20S proteasome A and B subunits [Allochromatium vinosum DSM 180]
          Length = 182

 Score =  184 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 111/179 (62%), Positives = 140/179 (78%), Gaps = 1/179 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TTIL+VR+   VVI GDGQVSLG TVMK NARKVRRL KG ++AGFAG++ADAFTL 
Sbjct: 4   LRGTTILSVRRGDTVVIGGDGQVSLGPTVMKGNARKVRRLYKGRVLAGFAGATADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E KLE++   L R++VE+AKDWR D+ LR LEA++ IAD T +L+++G GDV+EPE 
Sbjct: 64  ERFEGKLEKHQGHLTRAAVEMAKDWRTDRMLRRLEALLCIADSTTSLILSGTGDVIEPEQ 123

Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
            +MAIGSGGS+ALSAARAL  +T+  A EI  K++ IAADICVYTNHN+V+E L    +
Sbjct: 124 DIMAIGSGGSFALSAARALVANTELPAREIVEKSLHIAADICVYTNHNLVIEELDAKTD 182


>gi|268317429|ref|YP_003291148.1| 20S proteasome A and B subunits [Rhodothermus marinus DSM 4252]
 gi|262334963|gb|ACY48760.1| 20S proteasome A and B subunits [Rhodothermus marinus DSM 4252]
          Length = 183

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 94/187 (50%), Positives = 129/187 (68%), Gaps = 6/187 (3%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  +H    +H TT+L VR +G V +  DGQ +LG TVMK  A+KVR L  G I+AGFAG
Sbjct: 1   MPHRH----IHGTTVLGVRHNGRVALGADGQATLGNTVMKRRAQKVRALYNGKILAGFAG 56

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TL ER E KL+Q+   +LR++VELAKDWR D+YLR L+A++ +A     L+I+G
Sbjct: 57  ATADALTLFERFEGKLQQHGGNVLRAAVELAKDWRTDRYLRRLDALLAVASPDRLLLISG 116

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIV 181
            GD++EP++ ++AIGSGG +AL+AARAL       SA  I  +A+SIAADIC+YTNH   
Sbjct: 117 NGDLIEPDDDIVAIGSGGPFALAAARALRKHRPDLSARAIVEEALSIAADICIYTNHEFT 176

Query: 182 LETLKVG 188
           +  +   
Sbjct: 177 ILEIDSK 183


>gi|83944943|ref|ZP_00957309.1| ATP-dependent protease peptidase subunit [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851725|gb|EAP89580.1| ATP-dependent protease peptidase subunit [Oceanicaulis alexandrii
           HTCC2633]
          Length = 184

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 115/173 (66%), Positives = 142/173 (82%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL+VRK+G VV+AGDGQVS+G TV+KA ARKVR +  G +I GFAG++ADAF L 
Sbjct: 11  WRGTTILSVRKNGKVVLAGDGQVSIGDTVVKATARKVRPIASGKVITGFAGATADAFALF 70

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLEQYP+QL R+ VELAKDWR D+Y+R LEAM+++ADK+ T  +TG GDVLEPE+
Sbjct: 71  ERLEGKLEQYPDQLARACVELAKDWRTDRYMRRLEAMLIVADKSETFTLTGAGDVLEPED 130

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           GV AIGSGG+YALSAARAL+  +  AE IARKAM IA++ICVY+N N+ +ETL
Sbjct: 131 GVAAIGSGGNYALSAARALLDYEEDAEVIARKAMKIASEICVYSNGNLTVETL 183


>gi|254511675|ref|ZP_05123742.1| ATP-dependent protease HslV [Rhodobacteraceae bacterium KLH11]
 gi|221535386|gb|EEE38374.1| ATP-dependent protease HslV [Rhodobacteraceae bacterium KLH11]
          Length = 183

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 120/184 (65%), Positives = 144/184 (78%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M D  +    H TTI+ V+K G VVIAGDGQVSLGQTV+K  ARKVRRL  G   ++AGF
Sbjct: 1   MADSDFP-GWHGTTIIGVKKGGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFEVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D    LVI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDLLVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AARALM +   AE++AR+AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHNVAAIGSGGNFALAAARALMDSDKPAEQVAREAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VEAI 183


>gi|114571526|ref|YP_758206.1| ATP-dependent protease peptidase subunit [Maricaulis maris MCS10]
 gi|114341988|gb|ABI67268.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Maricaulis maris MCS10]
          Length = 189

 Score =  183 bits (465), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 115/175 (65%), Positives = 139/175 (79%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI+ VRK G +V+AGDGQVS+G TVMK NARKVRRL  G++IAGFAG++ADAF L 
Sbjct: 15  WRGTTIIAVRKGGRLVVAGDGQVSIGPTVMKGNARKVRRLAGGDVIAGFAGATADAFALF 74

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++ D   T ++TG GDVLEPE+
Sbjct: 75  ERLEAKLEQYPKQLARACVELAKDWRTDRYLRRLEAMLIVGDSNETFLLTGAGDVLEPED 134

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           GV+A+GSGG+YALSAARA+   +   E IARKAM IAA ICVYTN N+ +ETL+ 
Sbjct: 135 GVVAVGSGGNYALSAARAIFDYEADPEVIARKAMEIAARICVYTNENLTVETLES 189


>gi|85714081|ref|ZP_01045070.1| ATP-dependent protease peptidase subunit [Nitrobacter sp. Nb-311A]
 gi|85699207|gb|EAQ37075.1| ATP-dependent protease peptidase subunit [Nitrobacter sp. Nb-311A]
          Length = 177

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 124/173 (71%), Positives = 149/173 (86%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TTILTVRK G VVI GDGQVS+GQTV+K+NA+KVRRLGKG++I GFAG++ADAFTL 
Sbjct: 2   WHGTTILTVRKGGKVVIGGDGQVSIGQTVIKSNAKKVRRLGKGDVIGGFAGATADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+L+ADK ++LV+TG GDVLEPE 
Sbjct: 62  ERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMLVADKDVSLVLTGTGDVLEPEA 121

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           GVMAIGSGG+YAL+AARAL+ + N AE I R+++ IAADICVYTN N+ +E L
Sbjct: 122 GVMAIGSGGNYALAAARALIDSDNEAESIVRRSLDIAADICVYTNRNLTIEAL 174


>gi|77462069|ref|YP_351573.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
           2.4.1]
 gi|332559996|ref|ZP_08414318.1| ATP-dependent protease subunit HslV [Rhodobacter sphaeroides WS8N]
 gi|123593093|sp|Q3J6B2|HSLV_RHOS4 RecName: Full=ATP-dependent protease subunit HslV
 gi|77386487|gb|ABA77672.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Rhodobacter sphaeroides 2.4.1]
 gi|332277708|gb|EGJ23023.1| ATP-dependent protease subunit HslV [Rhodobacter sphaeroides WS8N]
          Length = 185

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 124/184 (67%), Positives = 146/184 (79%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M +  +    H TTIL VR+ G VV+AGDGQVSLGQTV+K  ARKVRRL  G   ++AGF
Sbjct: 1   MAEDRFP-GWHGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLEKKLE  P QL R+ VELAKDWRMDKYLRNLEAM+++ D    LV+
Sbjct: 60  AGSTADAFTLLERLEKKLEAAPGQLARACVELAKDWRMDKYLRNLEAMLIVTDGETLLVL 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR LM+T   AEEIARKAM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMATDLPAEEIARKAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VERI 183


>gi|315178883|gb|ADT85797.1| ATP-dependent protease peptidase subunit [Vibrio furnissii NCTC
           11218]
          Length = 185

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 102/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG++A +AA AL+ +T   A EIA+KA+ IA DICV+TNH+  +E L++
Sbjct: 122 AIGSGGNFAQAAAIALLENTDLDAREIAQKALKIAGDICVFTNHHHTIEELEI 174


>gi|84390846|ref|ZP_00991538.1| ATP-dependent protease peptidase subunit [Vibrio splendidus 12B01]
 gi|86147300|ref|ZP_01065614.1| ATP-dependent protease peptidase subunit [Vibrio sp. MED222]
 gi|218710818|ref|YP_002418439.1| ATP-dependent protease peptidase subunit [Vibrio splendidus LGP32]
 gi|254765622|sp|B7VLM6|HSLV_VIBSL RecName: Full=ATP-dependent protease subunit HslV
 gi|84376649|gb|EAP93526.1| ATP-dependent protease peptidase subunit [Vibrio splendidus 12B01]
 gi|85834865|gb|EAQ53009.1| ATP-dependent protease peptidase subunit [Vibrio sp. MED222]
 gi|218323837|emb|CAV20198.1| ATP-dependent protease hslV [Vibrio splendidus LGP32]
          Length = 182

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 100/173 (57%), Positives = 136/173 (78%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL E+ 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG++A +AA AL+ +T   A EIA K+++IA DICV+TNH+  +E L+ 
Sbjct: 122 AIGSGGNFAQAAATALLENTDLDAREIAEKSLNIAGDICVFTNHHHTIEELES 174


>gi|89067404|ref|ZP_01154917.1| ATP-dependent protease peptidase subunit [Oceanicola granulosus
           HTCC2516]
 gi|89046973|gb|EAR53027.1| ATP-dependent protease peptidase subunit [Oceanicola granulosus
           HTCC2516]
          Length = 186

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 124/186 (66%), Positives = 144/186 (77%), Gaps = 3/186 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M D  +    H TTI+ VRK G VVI+GDGQVSLG TV+K  ARKVRRL  G  ++IAGF
Sbjct: 1   MADSQFP-GWHGTTIIGVRKGGEVVISGDGQVSLGDTVIKGTARKVRRLSPGGYDVIAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLEKKLE  P QL R+SVELAKDWR DKYL+ LEAM++++D     VI
Sbjct: 60  AGSTADAFTLLERLEKKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDMFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG+YAL+A RALM T++ AEEIAR+AM IAADICVYTN N  
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAGRALMDTEHDAEEIARRAMQIAADICVYTNGNTT 179

Query: 182 LETLKV 187
           +E L  
Sbjct: 180 VEKLTA 185


>gi|84501209|ref|ZP_00999414.1| ATP-dependent protease peptidase subunit [Oceanicola batsensis
           HTCC2597]
 gi|84390500|gb|EAQ02988.1| ATP-dependent protease peptidase subunit [Oceanicola batsensis
           HTCC2597]
          Length = 185

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 117/184 (63%), Positives = 142/184 (77%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M DK +    H TTI+ VRK   VV+AGDGQVS+GQTVMK  ARKVRRL  G  +++ GF
Sbjct: 1   MADKDFP-GWHGTTIIGVRKGDEVVVAGDGQVSMGQTVMKGTARKVRRLSPGGYDVVCGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAF LLERLE KLE  P QL R+ VELAKDWR DKYL+ LEAM+++ D    L++
Sbjct: 60  AGSTADAFALLERLESKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGKELLIV 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE GV AIGSGG+YAL+AARAL+ T  +AEEIARK++ IAA+ICVYTN N+ 
Sbjct: 120 TGAGDVLEPEYGVAAIGSGGNYALAAARALIDTDAAAEEIARKSLGIAAEICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VERI 183


>gi|89075185|ref|ZP_01161616.1| ATP-dependent protease peptidase subunit [Photobacterium sp. SKA34]
 gi|90580883|ref|ZP_01236685.1| ATP-dependent protease peptidase subunit [Vibrio angustum S14]
 gi|330447100|ref|ZP_08310750.1| ATP-dependent protease subunit HslV [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|89049007|gb|EAR54574.1| ATP-dependent protease peptidase subunit [Photobacterium sp. SKA34]
 gi|90437954|gb|EAS63143.1| ATP-dependent protease peptidase subunit [Vibrio angustum S14]
 gi|328491291|dbj|GAA05247.1| ATP-dependent protease subunit HslV [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 175

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 106/174 (60%), Positives = 139/174 (79%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   LL+S+VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEALLAVADETGSLIITGNGDVVQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AA AL+ +T   A EIA KA++IA DICV+TNHN  +E L+  
Sbjct: 122 AIGSGGNFAQAAATALLENTDLGAREIAEKALNIAGDICVFTNHNHTIEELETK 175


>gi|222147042|ref|YP_002547999.1| ATP-dependent protease peptidase subunit [Agrobacterium vitis S4]
 gi|254802325|sp|B9JXW5|HSLV_AGRVS RecName: Full=ATP-dependent protease subunit HslV
 gi|221734032|gb|ACM34995.1| heat shock protein hslV [Agrobacterium vitis S4]
          Length = 186

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 138/184 (75%), Positives = 163/184 (88%), Gaps = 1/184 (0%)

Query: 7   KHYAV-KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +H     MH TTI+TVRK G+VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++
Sbjct: 3   EHNPYGTMHGTTIITVRKGGMVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLEKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADKT+TL ITG G
Sbjct: 63  ADAFTLLERLEKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKTVTLAITGNG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+G +AIGSGG+YAL+AA ALM T+ SAEE+ARKAM IAADICVYTN N+++ETL
Sbjct: 123 DVLEPEHGTIAIGSGGNYALAAALALMDTEKSAEEVARKAMKIAADICVYTNENVLVETL 182

Query: 186 KVGD 189
           +  +
Sbjct: 183 ESAN 186


>gi|13474179|ref|NP_105747.1| ATP-dependent protease peptidase subunit [Mesorhizobium loti
           MAFF303099]
 gi|21759196|sp|Q98CT8|HSLV_RHILO RecName: Full=ATP-dependent protease subunit HslV
 gi|14024931|dbj|BAB51533.1| heat shock protein HslV, proteasome-related peptidase subunit
           [Mesorhizobium loti MAFF303099]
          Length = 177

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 135/176 (76%), Positives = 156/176 (88%), Gaps = 1/176 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSSADAFTL 71
           MHATTI+TVRK   VVIAGDGQVSLGQT+MK NARKVRR+GKG N+IAGFAG++ADAFTL
Sbjct: 1   MHATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNARKVRRIGKGGNVIAGFAGATADAFTL 60

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK+++L +TG GDVLEPE
Sbjct: 61  LERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTGDVLEPE 120

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           +GVMAIGSGG+YAL+AARALM T   AEEIARKAM IA+DICVYTN+N V+ETL  
Sbjct: 121 HGVMAIGSGGNYALAAARALMDTDKDAEEIARKAMQIASDICVYTNNNFVVETLDA 176


>gi|150020135|ref|YP_001305489.1| ATP-dependent protease peptidase subunit [Thermosipho melanesiensis
           BI429]
 gi|189036248|sp|A6LJK3|HSLV_THEM4 RecName: Full=ATP-dependent protease subunit HslV
 gi|149792656|gb|ABR30104.1| 20S proteasome, A and B subunits [Thermosipho melanesiensis BI429]
          Length = 176

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 91/176 (51%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +K  +TT++ VRK+  VV+  DGQV+ G T+MK NA+KVR++G+GN++AGFAGS ADA  
Sbjct: 1   MKWRSTTVVCVRKNDSVVMVSDGQVTYGNTIMKGNAKKVRKMGEGNVLAGFAGSVADAMA 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +R E K  ++   LL+S+VELAKDWR D+ LR LEA++L+ADK  T +I+G G+V++P
Sbjct: 61  LFDRFEAKYREWGGNLLKSAVELAKDWRTDRVLRRLEALLLVADKKYTFIISGTGEVIQP 120

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E+ + +IGSG  YA++A RAL+  T  SA+EIA +++ IA++IC+YTN N  +E L
Sbjct: 121 EDDIASIGSGSPYAIAAGRALLKHTNLSAKEIALESIRIASEICIYTNDNFTIEEL 176


>gi|255659257|ref|ZP_05404666.1| ATP-dependent protease HslVU, peptidase subunit [Mitsuokella
           multacida DSM 20544]
 gi|260848712|gb|EEX68719.1| ATP-dependent protease HslVU, peptidase subunit [Mitsuokella
           multacida DSM 20544]
          Length = 182

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 106/178 (59%), Positives = 135/178 (75%), Gaps = 2/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++ HATTI  VRK+G   IAGDGQV+ G  T+MK+ ARKVRR+  G ++AGFAGS ADAF
Sbjct: 5   LQFHATTICAVRKNGKTAIAGDGQVTFGQNTIMKSTARKVRRIYHGRVLAGFAGSVADAF 64

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE Y   L R++VELAK+WR DK +  LEA++L+ADK   L+++G G+V+E
Sbjct: 65  TLFEKFEAKLETYNGNLQRAAVELAKEWRTDKMMGKLEALLLVADKDTLLMLSGNGEVIE 124

Query: 130 PENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           P+  V AIGSGG +ALSAARAL   T   A+EIA++A+SIAADICVYTNHNI +E L 
Sbjct: 125 PDGDVAAIGSGGFFALSAARALVKHTDMEAKEIAKEALSIAADICVYTNHNIRVEELD 182


>gi|307824295|ref|ZP_07654521.1| 20S proteasome A and B subunits [Methylobacter tundripaludum SV96]
 gi|307734675|gb|EFO05526.1| 20S proteasome A and B subunits [Methylobacter tundripaludum SV96]
          Length = 182

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 103/179 (57%), Positives = 135/179 (75%), Gaps = 1/179 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TTIL+VR+   VVI GDGQV+LG TVMK NARKVRRL    +IAGFAG++ADAFT
Sbjct: 1   MSFRGTTILSVRRGDKVVIGGDGQVTLGNTVMKGNARKVRRLYHDKVIAGFAGATADAFT 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KLE++   L R++VE+AKDWR D+ LR LEA++ IAD   +L+I+G GDV+EP
Sbjct: 61  LFEHFEGKLEKHRGNLTRAAVEMAKDWRTDRALRKLEALLTIADARTSLIISGTGDVIEP 120

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           E  +MAIGSGG++A +AARAL+ +T  SA EI  ++++IAADIC+YTNHN+ +E L   
Sbjct: 121 EFDLMAIGSGGAFAQAAARALLENTNLSAREIVERSLNIAADICIYTNHNLRIEELDAE 179


>gi|148927583|ref|ZP_01811055.1| ATP-dependent protease peptidase subunit [candidate division TM7
           genomosp. GTL1]
 gi|147887070|gb|EDK72566.1| ATP-dependent protease peptidase subunit [candidate division TM7
           genomosp. GTL1]
          Length = 181

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 102/177 (57%), Positives = 142/177 (80%), Gaps = 1/177 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +++  TTI++VR++G+VV+ GDGQV+LG T+MK+NARKVRRL    I+AGFAG++ADAFT
Sbjct: 5   IELRGTTIVSVRRNGMVVVGGDGQVTLGNTIMKSNARKVRRLYNNKILAGFAGATADAFT 64

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L ER E KLE +   L+RS+VELAKDWR DK LR LEAM+++AD   +L+I+G GDV+EP
Sbjct: 65  LFERFESKLETHQGNLVRSAVELAKDWRTDKMLRRLEAMLVVADAKASLIISGNGDVIEP 124

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           EN ++AIGSGG +A  AA+AL+ +T+ +A +I  KA++IAA+ C+YTN N  +ETL+
Sbjct: 125 ENSLIAIGSGGPFAKCAAQALLENTKLNARDITEKALTIAANTCIYTNTNFTIETLE 181


>gi|126732957|ref|ZP_01748718.1| 20S proteasome, A and B subunits [Sagittula stellata E-37]
 gi|126706574|gb|EBA05650.1| 20S proteasome, A and B subunits [Sagittula stellata E-37]
          Length = 183

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 122/175 (69%), Positives = 144/175 (82%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFT 70
            H TTI+ VRKDG VV+AGDGQVSLGQTV+K  ARKVRRL  G  +++AGFAGS+ADAFT
Sbjct: 8   WHGTTIIGVRKDGKVVVAGDGQVSLGQTVIKGTARKVRRLSPGGKDVVAGFAGSTADAFT 67

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLERLEKKLE+ P QL R+SV+LAKDWR DKYL  LEAM+++ D T   VITG GDVLEP
Sbjct: 68  LLERLEKKLEETPGQLQRASVDLAKDWRTDKYLSKLEAMLIVTDGTDLFVITGAGDVLEP 127

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E+ V AIGSGG+YAL+AARA+M T   AE +AR+AM+IAADICVYTN N+ +ETL
Sbjct: 128 EHDVAAIGSGGNYALAAARAMMDTDKDAETVAREAMAIAADICVYTNGNLTVETL 182


>gi|126734391|ref|ZP_01750138.1| 20S proteasome, A and B subunits [Roseobacter sp. CCS2]
 gi|126717257|gb|EBA14121.1| 20S proteasome, A and B subunits [Roseobacter sp. CCS2]
          Length = 185

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 121/186 (65%), Positives = 146/186 (78%), Gaps = 3/186 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M  + +    H TTI+ VRK G VVIAGDGQVSLGQTV+K  ARKVRRL  G  ++I GF
Sbjct: 1   MASEEFP-GWHGTTIIGVRKGGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGQDVICGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLEKKLE  P QL R+S+ELAKDWR DKYL+ LEAM++++D +   VI
Sbjct: 60  AGSTADAFTLLERLEKKLEATPGQLARASIELAKDWRTDKYLQKLEAMLIVSDGSELFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ + AIGSGG+YAL+A RALM T+  AE IAR+AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDIAAIGSGGNYALAAGRALMDTKKDAETIAREAMAIAADICVYTNGNLT 179

Query: 182 LETLKV 187
           +E +K 
Sbjct: 180 VEAIKA 185


>gi|86355716|ref|YP_467608.1| ATP-dependent protease peptidase subunit [Rhizobium etli CFN 42]
 gi|123513488|sp|Q2KE55|HSLV_RHIEC RecName: Full=ATP-dependent protease subunit HslV
 gi|86279818|gb|ABC88881.1| heat shock protease HslVU, subunit HslV protein [Rhizobium etli CFN
           42]
          Length = 175

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 135/173 (78%), Positives = 155/173 (89%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG++IAGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGDVIAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AARALM T   AEEIAR+A+ IAADICVYTNHNIV+E L V 
Sbjct: 122 AIGSGGNFAFAAARALMDTDKPAEEIARRALDIAADICVYTNHNIVVELLDVE 174


>gi|253991722|ref|YP_003043078.1| ATP-dependent protease peptidase subunit [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|211638497|emb|CAR67118.1| atp-dependent protease hslv (ec 3.4.25.-) (heat shock protein hslv)
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253783172|emb|CAQ86337.1| ATP-dependent protease [Photorhabdus asymbiotica]
          Length = 176

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENSSLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARA++ +T  SA EIA KA++IA DIC+YTNHN   E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTNLSAREIAEKALTIAGDICIYTNHNHNFEEL 172


>gi|240849873|ref|YP_002971261.1| heat shock protein HslV [Bartonella grahamii as4aup]
 gi|240266996|gb|ACS50584.1| heat shock protein HslV [Bartonella grahamii as4aup]
          Length = 193

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 130/183 (71%), Positives = 153/183 (83%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSS 65
           +H    M+ TTI+TVRK G VV+AGDGQVSLGQT+MK NARKVRRLG  G +IAGFAG++
Sbjct: 3   EHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARKVRRLGKNGVVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63  ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+GVMAIGSGG++ALSAARALM     AE IARKAM+IAA ICVYTN +  +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARALMDLDLDAETIARKAMAIAAKICVYTNDHFTIETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|148977245|ref|ZP_01813872.1| ATP-dependent protease peptidase subunit [Vibrionales bacterium
           SWAT-3]
 gi|145963527|gb|EDK28790.1| ATP-dependent protease peptidase subunit [Vibrionales bacterium
           SWAT-3]
          Length = 182

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 99/173 (57%), Positives = 135/173 (78%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKV RL    ++AGFAG +ADAFTL E+ 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVHRLYNDKVLAGFAGGTADAFTLFEKF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG++A +AA AL+ +T   A EIA K+++IA DICV+TNH+  +E L+ 
Sbjct: 122 AIGSGGNFAQAAATALLENTDLDAREIAEKSLNIAGDICVFTNHHHTVEELES 174


>gi|304398971|ref|ZP_07380840.1| 20S proteasome A and B subunits [Pantoea sp. aB]
 gi|308188607|ref|YP_003932738.1| ATP-dependent protease HslV (heat shock protein) [Pantoea vagans
           C9-1]
 gi|304353431|gb|EFM17809.1| 20S proteasome A and B subunits [Pantoea sp. aB]
 gi|308059117|gb|ADO11289.1| ATP-dependent protease HslV (heat shock protein) [Pantoea vagans
           C9-1]
          Length = 176

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 96/174 (55%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG +A +AARAL+ +T+  A +I  K+++IA DIC+YTNHN+  E L   
Sbjct: 122 AIGSGGPFAQAAARALLENTEMGARDIVEKSLNIAGDICIYTNHNVNFEELTSK 175


>gi|327398618|ref|YP_004339487.1| ATP-dependent protease hslV [Hippea maritima DSM 10411]
 gi|327181247|gb|AEA33428.1| ATP-dependent protease hslV [Hippea maritima DSM 10411]
          Length = 179

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 97/175 (55%), Positives = 133/175 (76%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI+ V+KD  V I GDGQV+LG TV+K+NA+K+R+L    +  GFAG++ADAFTL
Sbjct: 3   QFKGTTIICVKKDNQVAIGGDGQVTLGSTVIKSNAKKIRKLYNDKVAVGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+LE KL +Y   L R++VELAK+WR DK LR LEAM++ ADK    +I+G GDVL P+
Sbjct: 63  FEKLEDKLNEYAGNLTRAAVELAKEWRTDKILRRLEAMLIAADKDSIYLISGNGDVLSPD 122

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             V AIGSGG+YALSAA+A++  T  +AE IA++++ IA++IC+YTN+NI +ETL
Sbjct: 123 EDVCAIGSGGNYALSAAKAMIRFTSLNAETIAKESLKIASEICIYTNNNITIETL 177


>gi|299135731|ref|ZP_07028915.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX8]
 gi|298601855|gb|EFI58009.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX8]
          Length = 254

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 94/183 (51%), Positives = 134/183 (73%), Gaps = 5/183 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ +TT++ VR+   +V+A DGQV+LG TVMK +A+K+RRL    I+AGFAGS+ADAF+L
Sbjct: 72  RVRSTTVICVRRGDSMVMAADGQVTLGSTVMKHSAKKIRRLYNEKILAGFAGSTADAFSL 131

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP- 130
             R E KLEQY   L RS+VELAKDWR DK LR L+A++++AD     +++G GDV+EP 
Sbjct: 132 FTRFEAKLEQYGGNLGRSAVELAKDWRTDKLLRQLQALLIVADTKQMFLLSGDGDVIEPD 191

Query: 131 ---ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
              +  +  IGSGGS+AL+AA ALM +TQ +A EI  ++M IAA+IC+Y+N ++ +E LK
Sbjct: 192 AVGDGLIATIGSGGSFALAAATALMENTQMTAREIVERSMKIAAEICIYSNQSVTIEELK 251

Query: 187 VGD 189
             +
Sbjct: 252 AAE 254


>gi|312882761|ref|ZP_07742495.1| ATP-dependent protease peptidase subunit [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309369545|gb|EFP97063.1| ATP-dependent protease peptidase subunit [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 182

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 139/175 (79%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAGS+ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGSTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           AIGSGG++A +AA AL+ +++  A EIA K++ IA DICV+TNH+  +E L++ +
Sbjct: 122 AIGSGGNFAQAAATALLENSELDAREIAEKSLKIAGDICVFTNHHHTIEELEIVE 176


>gi|319780229|ref|YP_004139705.1| 20S proteasome A and subunit betas [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166117|gb|ADV09655.1| 20S proteasome A and B subunits [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 183

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 133/182 (73%), Positives = 156/182 (85%), Gaps = 1/182 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
               + MHATTI+TVRK   VVIAGDGQVSLGQT+MK NA+KVRR+GKG N+IAGFAG++
Sbjct: 1   MSNELTMHATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNAKKVRRIGKGGNVIAGFAGAT 60

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL R+ VELAKDWR D+YLR LEAM+L+ADK+++L +TG G
Sbjct: 61  ADAFTLLERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTG 120

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE GVMAIGSGG+YAL+AARALM +   AEEIARKAM IA+DICVYTN+N V+ETL
Sbjct: 121 DVLEPEFGVMAIGSGGNYALAAARALMDSDKDAEEIARKAMQIASDICVYTNNNFVVETL 180

Query: 186 KV 187
             
Sbjct: 181 DA 182


>gi|188996765|ref|YP_001931016.1| 20S proteasome A and B subunits [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229486365|sp|B2V939|HSLV_SULSY RecName: Full=ATP-dependent protease subunit HslV
 gi|188931832|gb|ACD66462.1| 20S proteasome A and B subunits [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 178

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 98/176 (55%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TTIL VR++G  VIAGDGQV+LG  V+K  A+K+R L +G +I GFAGS+AD   L
Sbjct: 3   KIKSTTILAVRRNGKTVIAGDGQVTLGSAVVKHTAKKIRVLNEGKVIVGFAGSAADGLAL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +ERLE+KL +Y   L++S+VELAKDWR+DKYLR LEA+++ ADK   L+++G GDV+EP+
Sbjct: 63  MERLEEKLNKYKGNLVKSAVELAKDWRLDKYLRRLEAVMIAADKNNMLLLSGNGDVIEPD 122

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             V+AIGSGG YA SAA AL   T   A +I  +AM IA +IC+YTN N V+E ++
Sbjct: 123 EPVLAIGSGGDYARSAALALYRNTDLDARKIVEEAMKIAGEICIYTNQNFVIEEIE 178


>gi|304311983|ref|YP_003811581.1| Peptidase component of the HslUV protease (heat shock protein)
           [gamma proteobacterium HdN1]
 gi|301797716|emb|CBL45938.1| Peptidase component of the HslUV protease (heat shock protein)
           [gamma proteobacterium HdN1]
          Length = 179

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 108/175 (61%), Positives = 136/175 (77%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+ R++G VVI GDGQV+LG TVMK NARKVRRL    +IAGFAG +ADAFTL
Sbjct: 3   QYRGTTILSARRNGKVVIGGDGQVTLGNTVMKGNARKVRRLYHDKVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+RS+VELAKDWR D+ LR LEA++ +AD   +L+ITG GDV++PE
Sbjct: 63  FERFEAKLEKHQGHLVRSAVELAKDWRTDRMLRRLEALLAVADADASLIITGNGDVIQPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           N ++AIGSGG +ALSAARAL  +T+ SA EI  K++ IAADIC+YTNHN  +E L
Sbjct: 123 NDLIAIGSGGPFALSAARALYENTELSAREIIEKSLGIAADICIYTNHNFTIEEL 177


>gi|302872577|ref|YP_003841213.1| 20S proteasome A and B subunits [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575436|gb|ADL43227.1| 20S proteasome A and B subunits [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 176

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 98/175 (56%), Positives = 128/175 (73%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V IAGDGQV+     +MK+ A+KVR+L  G ++ GFAGS ADA TL
Sbjct: 2   FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+KLEQ    L +S VELAK+WR DK LR LEA++++ADK    V++G G+V+EP+
Sbjct: 62  CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKDHLFVVSGSGEVVEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + + AIGSGG YAL+AARAL  +T  SA EIA+KA+ IAA ICVYTN+NI +  L
Sbjct: 122 DNIAAIGSGGPYALAAARALFQNTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176


>gi|118590479|ref|ZP_01547881.1| ATP-dependent protease peptidase subunit [Stappia aggregata IAM
           12614]
 gi|118436942|gb|EAV43581.1| ATP-dependent protease peptidase subunit [Stappia aggregata IAM
           12614]
          Length = 186

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 123/186 (66%), Positives = 148/186 (79%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +     + H TTI+ VRK G VVIAGDGQVSLGQTV+K  ARKVR L KG +IAGFAG
Sbjct: 1   MSETREPAQWHGTTIMMVRKGGKVVIAGDGQVSLGQTVIKHTARKVRLLAKGEVIAGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK ++LV+TG
Sbjct: 61  ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKNVSLVLTG 120

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
            GDVLEPE GVM IGSGG+YAL+A RAL  T   AE IARKAM++AA+ICVYTN ++ +E
Sbjct: 121 TGDVLEPEGGVMGIGSGGNYALAAGRALADTDYDAETIARKAMAVAAEICVYTNASVTVE 180

Query: 184 TLKVGD 189
           +L   +
Sbjct: 181 SLDTAE 186


>gi|254464707|ref|ZP_05078118.1| ATP-dependent protease HslV [Rhodobacterales bacterium Y4I]
 gi|206685615|gb|EDZ46097.1| ATP-dependent protease HslV [Rhodobacterales bacterium Y4I]
          Length = 185

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 121/184 (65%), Positives = 144/184 (78%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M D  +    H TTI+ V+K+G VVIAGDGQVSLGQTV+K  ARKVRRL  G  +++AGF
Sbjct: 1   MADDKFP-GWHGTTIIGVKKNGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDMFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG+YAL+AAR LM +  SAE +AR AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAARGLMDSDRSAETVARDAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +ET+
Sbjct: 180 VETI 183


>gi|114769761|ref|ZP_01447371.1| ATP-dependent protease peptidase subunit [alpha proteobacterium
           HTCC2255]
 gi|114549466|gb|EAU52348.1| ATP-dependent protease peptidase subunit [alpha proteobacterium
           HTCC2255]
 gi|161170257|gb|ABX59227.1| ATP-dependent protease HslVU ClpYQ peptidase subunit [uncultured
           marine bacterium EB000_55B11]
 gi|297183786|gb|ADI19909.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
          Length = 221

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 109/185 (58%), Positives = 145/185 (78%), Gaps = 3/185 (1%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAG 60
           +M    +    H TTI+ V+K   VVIAGDGQVSLG TV+K +A+KVRR+  G  ++I G
Sbjct: 36  IMEQSKFP-GWHGTTIIGVKKGDDVVIAGDGQVSLGNTVIKGSAKKVRRISPGGHDVICG 94

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAGS+ADAFTLLERLE KLE  P QL ++S+ LAKDWRMDKYL+NLEAM+++ D +   V
Sbjct: 95  FAGSTADAFTLLERLEAKLEASPGQLAKASISLAKDWRMDKYLKNLEAMLIVTDGSDIFV 154

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
           ITG GDVLEPE+G+ AIGSGG++AL+AARAL+ ++  AE IA+K+++IAA+ICV+TN N+
Sbjct: 155 ITGAGDVLEPEHGIAAIGSGGNFALAAARALIDSEQDAEAIAKKSLTIAAEICVFTNGNM 214

Query: 181 VLETL 185
            +E +
Sbjct: 215 TVEKI 219


>gi|220931600|ref|YP_002508508.1| heat shock protein HslVU, ATP dependent protease HslV
           [Halothermothrix orenii H 168]
 gi|219992910|gb|ACL69513.1| heat shock protein HslVU, ATP dependent protease HslV
           [Halothermothrix orenii H 168]
          Length = 181

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 103/176 (58%), Positives = 139/176 (78%), Gaps = 2/176 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            +HATT++ V+  G   +AGDGQV++G T+MK  ARKVRRL KGNI+AGFAG+SADAFTL
Sbjct: 6   DIHATTVVAVKYKGKTAMAGDGQVTMGNTIMKGGARKVRRLYKGNILAGFAGTSADAFTL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L R++VELAK+WR DK LR LEA++L+A++   L+I+G GDV+EP+
Sbjct: 66  FEKFEVKLEEYHGNLERAAVELAKEWRTDKVLRKLEALLLVANEEKILLISGNGDVIEPD 125

Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + V AIGSGG YAL+AARAL   ++   A++IAR+A+ IA++IC+YTN NIV+E L
Sbjct: 126 DDVTAIGSGGPYALAAARALVKHNSGLEAQDIAREALKIASEICIYTNGNIVVEEL 181


>gi|322834996|ref|YP_004215023.1| 20S proteasome A and B subunits [Rahnella sp. Y9602]
 gi|321170197|gb|ADW75896.1| 20S proteasome A and B subunits [Rahnella sp. Y9602]
          Length = 193

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 95/174 (54%), Positives = 131/174 (75%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 19  TTIVSVRRNGKVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 78

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+I+G GDV++PEN ++
Sbjct: 79  ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIISGNGDVIQPENDLI 138

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +++  A +I  K++SIA DIC+YTN    +E L   
Sbjct: 139 AIGSGGPYAQAAARALLENSELEARDIVEKSLSIAGDICIYTNQFHTIEELSSK 192


>gi|254295472|ref|YP_003061495.1| ATP-dependent protease peptidase subunit [Hirschia baltica ATCC
           49814]
 gi|254044003|gb|ACT60798.1| 20S proteasome A and B subunits [Hirschia baltica ATCC 49814]
          Length = 185

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 124/185 (67%), Positives = 149/185 (80%), Gaps = 1/185 (0%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFA 62
           M         H+TTIL VRK G VVI GDGQVS+G TVMK NARKVRRLG+G NIIAGFA
Sbjct: 1   MTQASSPQSWHSTTILAVRKPGRVVIIGDGQVSMGNTVMKGNARKVRRLGEGGNIIAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL ERLE KLE++P QL R++VELAKDWR DKYL+ LEA++++ADK  TLV+T
Sbjct: 61  GATADAFTLFERLELKLERFPGQLQRAAVELAKDWRTDKYLQKLEALLIVADKHTTLVLT 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
           GMGDVLEPE  V+AIGSGG+YALSAARA+   +  AE + RKAM +AA+ICVYTN+N V+
Sbjct: 121 GMGDVLEPEYDVVAIGSGGNYALSAARAIFDYEEDAEVLGRKAMEVAAEICVYTNNNFVV 180

Query: 183 ETLKV 187
           E+L V
Sbjct: 181 ESLDV 185


>gi|330993963|ref|ZP_08317893.1| ATP-dependent protease subunit HslV [Gluconacetobacter sp. SXCC-1]
 gi|329758909|gb|EGG75423.1| ATP-dependent protease subunit HslV [Gluconacetobacter sp. SXCC-1]
          Length = 219

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 119/183 (65%), Positives = 146/183 (79%), Gaps = 2/183 (1%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
           H  V  H TTIL VR+ G V +AGDGQV+LG TV+K NARKVRR+G  G I+AGFAG++A
Sbjct: 31  HDPVGWHGTTILCVRRGGQVAMAGDGQVTLGATVIKGNARKVRRIGPTGQILAGFAGATA 90

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD   +  +TG GD
Sbjct: 91  DAFTLLERLENKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADAERSFTLTGNGD 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE+G++AIGSGG+YALSAARAL+     SA +IAR++M IA DICVYTNH++++ETL
Sbjct: 151 VLEPEDGIIAIGSGGNYALSAARALLGIDGLSAVDIARRSMKIAGDICVYTNHSVIVETL 210

Query: 186 KVG 188
              
Sbjct: 211 GTD 213


>gi|254459656|ref|ZP_05073072.1| ATP-dependent protease HslV [Rhodobacterales bacterium HTCC2083]
 gi|206676245|gb|EDZ40732.1| ATP-dependent protease HslV [Rhodobacteraceae bacterium HTCC2083]
          Length = 185

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 119/186 (63%), Positives = 142/186 (76%), Gaps = 3/186 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M    +    H TTI+ VRK G VVIAGDGQVSLGQTV+K  A+KVRRL  G  +++ GF
Sbjct: 1   MSSNEFP-GWHGTTIIGVRKGGEVVIAGDGQVSLGQTVIKGTAKKVRRLSPGGYDVVCGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDLFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR LM    +AEEIARKAM+IA+DICVYTN  + 
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMEGDGTAEEIARKAMAIASDICVYTNGKLT 179

Query: 182 LETLKV 187
           +ET+K 
Sbjct: 180 VETIKA 185


>gi|121997993|ref|YP_001002780.1| ATP-dependent protease peptidase subunit [Halorhodospira halophila
           SL1]
 gi|189028450|sp|A1WWB6|HSLV_HALHL RecName: Full=ATP-dependent protease subunit HslV
 gi|121589398|gb|ABM61978.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Halorhodospira halophila SL1]
          Length = 184

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 100/180 (55%), Positives = 138/180 (76%), Gaps = 2/180 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TTIL VR++G V + GDGQV+LG TV+K NARKVRRL  G ++AGFAG++ADAFTL 
Sbjct: 4   LHGTTILAVRREGQVALGGDGQVTLGHTVLKGNARKVRRLYHGRVLAGFAGATADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E +LE++  QL RS+VELAK+WR D+ LR LEA++++A+    L ++G GDV+EPE+
Sbjct: 64  ERFEAQLEKHHGQLARSAVELAKEWRSDRVLRRLEALLVVANTESLLTLSGTGDVIEPEH 123

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL-KVGDE 190
            +MA+GSGG YA +A RAL+  T   A++I ++A+ IA DICVYTN +I +ETL +  +E
Sbjct: 124 DLMAVGSGGPYAQAAGRALLESTDLPADQITQRALEIAGDICVYTNRHITVETLPETREE 183


>gi|254284434|ref|ZP_04959402.1| heat shock protein HslV [gamma proteobacterium NOR51-B]
 gi|219680637|gb|EED36986.1| heat shock protein HslV [gamma proteobacterium NOR51-B]
          Length = 178

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 105/176 (59%), Positives = 138/176 (78%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+DG+V I GDGQVS+G TVMK NARKVRRL +  +IAGFAG +ADAFTL
Sbjct: 3   QYHGTTIVSVRRDGIVAIGGDGQVSMGNTVMKGNARKVRRLFRDQVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E +LE+Y  QL R++VELAK WR ++ LR LEA++ +AD+  +L+ITG GDV+EPE
Sbjct: 63  FELFEAQLEKYQGQLTRAAVELAKLWRSERSLRRLEALLAVADRETSLIITGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + ++AIGSGG YA +AARAL+ +T+  AE I RK ++IA DICV+TNHN  +ETL 
Sbjct: 123 DNLIAIGSGGPYAQAAARALLDNTELGAEAIVRKGLTIAGDICVFTNHNHTIETLD 178


>gi|225874218|ref|YP_002755677.1| ATP-dependent protease HslV [Acidobacterium capsulatum ATCC 51196]
 gi|225793905|gb|ACO33995.1| ATP-dependent protease HslV [Acidobacterium capsulatum ATCC 51196]
          Length = 204

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 101/177 (57%), Positives = 135/177 (76%), Gaps = 1/177 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ +TT++ VR+   VV+A DGQV++G  V+K +ARKVRRL +  ++AGFAGS+ADAF+L
Sbjct: 28  RIRSTTVICVRRGNSVVMAADGQVTMGDAVIKQSARKVRRLYQDKVLAGFAGSTADAFSL 87

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
             R E KLEQ+   L R++VELAKDWR DK LRNLEA++++AD     +I G GDV+EP+
Sbjct: 88  FGRFEGKLEQHAGNLGRAAVELAKDWRTDKMLRNLEALLIVADPHQMFLIGGAGDVIEPD 147

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            GV AIGSGGSYA++AARAL+ +T  SA EIA KA+ IA DIC+YTN +I LE L+ 
Sbjct: 148 EGVTAIGSGGSYAMAAARALLENTDLSAREIAEKALRIAGDICIYTNGHITLEELQA 204


>gi|90420976|ref|ZP_01228880.1| heat shock protein HslV [Aurantimonas manganoxydans SI85-9A1]
 gi|90334754|gb|EAS48530.1| heat shock protein HslV [Aurantimonas manganoxydans SI85-9A1]
          Length = 194

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 126/185 (68%), Positives = 156/185 (84%), Gaps = 1/185 (0%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGF 61
           +  + H    ++ TTI+TVRK G VVIAGDGQVSLG TVMK NARKVRR+GK G++IAGF
Sbjct: 7   MSMENHDPATIYGTTIVTVRKGGKVVIAGDGQVSLGNTVMKGNARKVRRIGKKGDVIAGF 66

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AG++ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+++AD+ +TL +
Sbjct: 67  AGATADAFTLLERLEAKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMIVADRQVTLTL 126

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+GV+AIGSGG+YAL+AARAL  T   AEEIAR+AM IA +IC+YTN N+V
Sbjct: 127 TGNGDVLEPEHGVIAIGSGGNYALAAARALADTDYDAEEIARRAMKIAGEICIYTNDNVV 186

Query: 182 LETLK 186
           +E+L 
Sbjct: 187 VESLD 191


>gi|220925309|ref|YP_002500611.1| ATP-dependent protease peptidase subunit [Methylobacterium nodulans
           ORS 2060]
 gi|219949916|gb|ACL60308.1| 20S proteasome A and B subunits [Methylobacterium nodulans ORS
           2060]
          Length = 176

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 119/175 (68%), Positives = 146/175 (83%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG++ADAFTL 
Sbjct: 1   MHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGATADAFTLF 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ ++L+++G GDVLEPE 
Sbjct: 61  ERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVSLMLSGSGDVLEPEG 120

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           G+MAIGSGG+YAL+AARAL      AE I R++++IAA+ICVYTN N+V+E+L+ 
Sbjct: 121 GIMAIGSGGNYALAAARALEDQDLDAESIVRRSLAIAAEICVYTNGNLVIESLEA 175


>gi|319789317|ref|YP_004150950.1| 20S proteasome A and B subunits [Thermovibrio ammonificans HB-1]
 gi|317113819|gb|ADU96309.1| 20S proteasome A and B subunits [Thermovibrio ammonificans HB-1]
          Length = 176

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 107/176 (60%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  H TTI  V +DG V +AGDGQV+LG TV K  ARKVR+L  G ++AGFAGS ADAF+
Sbjct: 1   MDFHGTTICAVLRDGKVAMAGDGQVTLGNTVFKNGARKVRKLYGGRVLAGFAGSVADAFS 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLER E KL+ Y   LL+S+VELAKDWR D+ LR LEAM+L+ADK+  L+I+G GDV+EP
Sbjct: 61  LLERFEDKLQTYGGNLLKSAVELAKDWRTDRILRRLEAMLLVADKSRILLISGNGDVIEP 120

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +  VMA+GSGG YA +AA AL  +T+  A EIARKA+ IA +IC+YTN NIV+E L
Sbjct: 121 DIPVMAVGSGGPYAQAAATALYQNTELPAAEIARKALEIAGNICIYTNTNIVVEEL 176


>gi|332308410|ref|YP_004436261.1| 20S proteasome A and B subunits [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175739|gb|AEE24993.1| 20S proteasome A and B subunits [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 174

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VVIAGDGQVSLG TVMK NA+KVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGNQVVIAGDGQVSLGNTVMKGNAKKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L R++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PEN ++
Sbjct: 62  ESKLEIHQGNLTRAAVELAKDWRTDRMLRKLEALLAVADETASFIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG +A SAA AL+ +T+ SAEEIA KA++IA +ICV+TNH+  +E + 
Sbjct: 122 AIGSGGPFAQSAASALLDNTELSAEEIAEKALTIAGNICVFTNHSHTIEKID 173


>gi|3114398|pdb|1NED|A Chain A, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
           Resolution
 gi|3114399|pdb|1NED|B Chain B, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
           Resolution
 gi|3114400|pdb|1NED|C Chain C, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
           Resolution
          Length = 183

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 1   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 61  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 120

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH   +E L    E
Sbjct: 121 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELSYKAE 176


>gi|146313673|ref|YP_001178747.1| ATP-dependent protease peptidase subunit [Enterobacter sp. 638]
 gi|166918422|sp|A4WG66|HSLV_ENT38 RecName: Full=ATP-dependent protease subunit HslV
 gi|145320549|gb|ABP62696.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Enterobacter sp. 638]
          Length = 176

 Score =  182 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH   +E L   
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALGIAGDICIYTNHFHTIEELNSK 175


>gi|222084249|ref|YP_002542775.1| heat shock protease HslVU [Agrobacterium radiobacter K84]
 gi|254802324|sp|B9JG70|HSLV_AGRRK RecName: Full=ATP-dependent protease subunit HslV
 gi|221721697|gb|ACM24853.1| heat shock protease HslVU [Agrobacterium radiobacter K84]
          Length = 175

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 133/173 (76%), Positives = 158/173 (91%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+T+RK G VV+AGDGQVSLGQTVMK NARKVRR+GKG++IAGFAG++ADAFTLLERL
Sbjct: 2   TTIVTIRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGDVIAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK++TL ITG GDVLEPE+G +
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSVTLAITGNGDVLEPEHGAL 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG+YAL+AARALM T  SAE++AR+A+ IAADICVYTNHN+V+ETL   
Sbjct: 122 AIGSGGNYALAAARALMDTDKSAEDVARRALDIAADICVYTNHNVVIETLDAE 174


>gi|237807245|ref|YP_002891685.1| ATP-dependent protease peptidase subunit [Tolumonas auensis DSM
           9187]
 gi|259491399|sp|C4L9X0|HSLV_TOLAT RecName: Full=ATP-dependent protease subunit HslV
 gi|237499506|gb|ACQ92099.1| 20S proteasome A and B subunits [Tolumonas auensis DSM 9187]
          Length = 180

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 102/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQVSLG TVMK NARKV RL  G ++AGFAG +ADAFTLLER 
Sbjct: 2   TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L R++V LAK+WR D+ LR LEA++ +AD   + +ITG GDV++PEN ++
Sbjct: 62  EAKLQAHQGNLERAAVALAKEWRTDRALRRLEALLAVADAQRSFIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG++A SAARAL+ +T+ SAEEI +KA++IA DICV+TN    +E L+
Sbjct: 122 AIGSGGAFAQSAARALLENTELSAEEIVKKALTIAGDICVFTNSFHTIEVLE 173


>gi|15643287|ref|NP_228331.1| ATP-dependent protease peptidase subunit [Thermotoga maritima MSB8]
 gi|281411739|ref|YP_003345818.1| 20S proteasome A and B subunits [Thermotoga naphthophila RKU-10]
 gi|11133189|sp|Q9WYZ1|HSLV_THEMA RecName: Full=ATP-dependent protease subunit HslV; Flags: Precursor
 gi|4981034|gb|AAD35606.1|AE001728_7 heat shock protein HslV [Thermotoga maritima MSB8]
 gi|281372842|gb|ADA66404.1| 20S proteasome A and B subunits [Thermotoga naphthophila RKU-10]
          Length = 176

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 95/175 (54%), Positives = 128/175 (73%), Gaps = 1/175 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +K H TTIL VR++G  V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA T
Sbjct: 1   MKFHGTTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMT 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +R E KL ++   L +++VELAKDWR D+ LR LEA++L+ADK    +I+G G+V++P
Sbjct: 61  LFDRFEAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQP 120

Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           ++   AIGSGG Y   +A   L +T  SA EI  KAM+IA +IC+YTN NIV+E 
Sbjct: 121 DDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIAGEICIYTNQNIVIEE 175


>gi|254251130|ref|ZP_04944448.1| protease HslVU [Burkholderia dolosa AUO158]
 gi|124893739|gb|EAY67619.1| protease HslVU [Burkholderia dolosa AUO158]
          Length = 211

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 98/176 (55%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 36  QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 95

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD   TLVITG GDVL+PE
Sbjct: 96  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADANTTLVITGNGDVLDPE 155

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T+ S  +I  K++ IA D+C+YTNHN ++ET++
Sbjct: 156 GGICAIGSGGAYAQAAARALAENTELSPRQIVEKSLEIAGDMCIYTNHNRIIETIE 211


>gi|319408003|emb|CBI81657.1| heat shock protein [Bartonella schoenbuchensis R1]
          Length = 186

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 129/183 (70%), Positives = 156/183 (85%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
           +H + +M+ TTI+TVRK   VV+AGDGQVSLGQT+MK NARKVRRLGKG  +IAGFAG++
Sbjct: 3   EHKSDRMYGTTIVTVRKGDKVVMAGDGQVSLGQTIMKGNARKVRRLGKGGTVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63  ADAFTLLERLEIKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+G+MAIGSGG++ALSAARAL+ T   A+ IA KAMSIAA+ICVYTN N  +ETL
Sbjct: 123 DVLEPEDGIMAIGSGGNFALSAARALIDTDLDAKAIACKAMSIAAEICVYTNGNFTIETL 182

Query: 186 KVG 188
              
Sbjct: 183 DTE 185


>gi|163867503|ref|YP_001608702.1| ATP-dependent protease peptidase subunit [Bartonella tribocorum CIP
           105476]
 gi|161017149|emb|CAK00707.1| heat shock protein [Bartonella tribocorum CIP 105476]
          Length = 193

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 130/183 (71%), Positives = 153/183 (83%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSS 65
           +H    M+ TTI+TVRK G VV+AGDGQVSLGQT+MK NARKVRRLG  G +IAGFAG++
Sbjct: 3   EHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARKVRRLGKSGVVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63  ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+GVMAIGSGG++ALSAARALM     AE IARKAM+IAA ICVYTN +  +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARALMDLDLDAETIARKAMAIAAKICVYTNDHFTIETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|311693357|gb|ADP96230.1| ATP-dependent protease peptidase subunit [marine bacterium HP15]
          Length = 176

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 109/175 (62%), Positives = 135/175 (77%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR+D  V + GDGQVSLG TVMK NARKVRRL  G +IAGFAG +ADAFTL ER 
Sbjct: 2   TTILSVRRDDEVAMGGDGQVSLGNTVMKGNARKVRRLYNGQVIAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62  EAQLEKHQGNLTRAAVELAKDWRTDRALRRLEALLAVADKTASLIITGNGDVIEPEQGLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           AIGSGG +A ++ARAL+ +T  SA EI  K + IAADIC+YTNHN  LE L   D
Sbjct: 122 AIGSGGPFAQASARALLENTDLSAHEIVEKGLDIAADICIYTNHNRTLEVLSKND 176


>gi|27364752|ref|NP_760280.1| ATP-dependent protease subunit HslV [Vibrio vulnificus CMCP6]
 gi|37681199|ref|NP_935808.1| ATP-dependent protease peptidase subunit [Vibrio vulnificus YJ016]
 gi|31340167|sp|Q8DCP3|HSLV_VIBVU RecName: Full=ATP-dependent protease subunit HslV
 gi|47605633|sp|Q7MH57|HSLV_VIBVY RecName: Full=ATP-dependent protease subunit HslV
 gi|27360897|gb|AAO09807.1| ATP-dependent protease hslV [Vibrio vulnificus CMCP6]
 gi|37199950|dbj|BAC95779.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio vulnificus
           YJ016]
          Length = 184

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 105/176 (59%), Positives = 139/176 (78%), Gaps = 1/176 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           AIGSGG+YA +AA AL+ +T+  A EIA KA++IA DICV+TNHN  +E L++  E
Sbjct: 122 AIGSGGAYAQAAATALLENTELDAREIAEKALNIAGDICVFTNHNHTIEELEIPAE 177


>gi|146278981|ref|YP_001169140.1| ATP-dependent protease peptidase subunit [Rhodobacter sphaeroides
           ATCC 17025]
 gi|189036234|sp|A4WWS1|HSLV_RHOS5 RecName: Full=ATP-dependent protease subunit HslV
 gi|145557222|gb|ABP71835.1| 20S proteasome, A and B subunits [Rhodobacter sphaeroides ATCC
           17025]
          Length = 185

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 123/184 (66%), Positives = 145/184 (78%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M +  +    H TTIL VR+ G VV+AGDGQVSLGQTV+K  ARKVRRL  G   ++AGF
Sbjct: 1   MAEDRFP-GWHGTTILAVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHEVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLEKKLE    QL R+ VELAKDWRMDKYLRNLEAM+++ D    LVI
Sbjct: 60  AGSTADAFTLLERLEKKLEAASGQLARACVELAKDWRMDKYLRNLEAMLIVTDGETLLVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR LM+T   AEE+ARKAM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARGLMATDLPAEEVARKAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VERI 183


>gi|323494456|ref|ZP_08099562.1| ATP-dependent protease subunit HslV [Vibrio brasiliensis LMG 20546]
 gi|323311279|gb|EGA64437.1| ATP-dependent protease subunit HslV [Vibrio brasiliensis LMG 20546]
          Length = 181

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 138/176 (78%), Gaps = 1/176 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL E+ 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           AIGSGG++A +AA AL+ +T+  A EIA K++ IA DICV+TNH+  +E L++  +
Sbjct: 122 AIGSGGNFAQAAATALLENTELDAREIAEKSLKIAGDICVFTNHHHTIEELEIPAD 177


>gi|317050063|ref|YP_004117711.1| 20S proteasome subunits A/B [Pantoea sp. At-9b]
 gi|316951680|gb|ADU71155.1| 20S proteasome A and B subunits [Pantoea sp. At-9b]
          Length = 195

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 98/171 (57%), Positives = 134/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 21  TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 80

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD++ +L+I+G GDV++PEN ++
Sbjct: 81  ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADESASLIISGNGDVIQPENDLI 140

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+  A++I  KA+ IA DIC+YTNHN+  E L
Sbjct: 141 AIGSGGPYAQAAARALLENTELGAKDIVAKALDIAGDICIYTNHNVNFEEL 191


>gi|319898328|ref|YP_004158421.1| heat shock protein [Bartonella clarridgeiae 73]
 gi|319402292|emb|CBI75831.1| heat shock protein [Bartonella clarridgeiae 73]
          Length = 193

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 131/183 (71%), Positives = 153/183 (83%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIAGFAGSS 65
           +H    M+ TTI+TVRKD  VV+AGDGQVSLGQT+MK+NARKVRRLGKG  +IAGFAG++
Sbjct: 3   EHKPNIMYGTTIVTVRKDNKVVMAGDGQVSLGQTIMKSNARKVRRLGKGGTVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK +TL +TG+G
Sbjct: 63  ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKVTLALTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+GVMAIGSGG++ALSAAR LM     AE IA KAMSIAA ICVYTN N  +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDIDLDAEAIACKAMSIAAKICVYTNDNFTIETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|225848446|ref|YP_002728609.1| ATP-dependent protease peptidase subunit [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643867|gb|ACN98917.1| ATP-dependent protease HslVU, peptidase subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 178

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 97/176 (55%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TTIL VR++G  V+AGDGQV+LG +VMK  A+KVR+L +G ++ GFAGS+AD   L
Sbjct: 3   KIRSTTILVVRRNGKTVMAGDGQVTLGSSVMKQTAKKVRKLNEGRVVVGFAGSAADGLAL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +ERLE+KL ++   L+R+SVELAKDWR+DKYLR LEA+++ ADK   L+++G GDV+EP+
Sbjct: 63  MERLEEKLNKHRGNLIRASVELAKDWRLDKYLRRLEAVMIAADKENILLLSGNGDVIEPD 122

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             V+AIGSGG YA SAA AL   T   A +I  +AM IA +IC+YTN N ++E ++
Sbjct: 123 EPVLAIGSGGDYARSAALALYRNTDLDARKIVEEAMKIAGEICIYTNTNFIIEEIE 178


>gi|212703173|ref|ZP_03311301.1| hypothetical protein DESPIG_01215 [Desulfovibrio piger ATCC 29098]
 gi|212673439|gb|EEB33922.1| hypothetical protein DESPIG_01215 [Desulfovibrio piger ATCC 29098]
          Length = 178

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 104/178 (58%), Positives = 134/178 (75%), Gaps = 2/178 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            ++ HATTIL V+KDG V +AGDGQV+LG   +MK  ARKVRRL  G I+AGFAG++ADA
Sbjct: 1   MIETHATTILAVKKDGQVAMAGDGQVTLGQSMIMKHTARKVRRLYDGKIVAGFAGATADA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           FTL E  E KL+++   L RS+VEL K+WR DKYLR LEAM+L++D    L+++G GDV 
Sbjct: 61  FTLFELFEAKLKEFRGNLQRSAVELTKEWRKDKYLRRLEAMLLVSDGEHILLLSGNGDVF 120

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EP++ V AIGSGG YALSAARAL+      A E+A ++M IA++ICVYTN + V+ETL
Sbjct: 121 EPDDDVAAIGSGGPYALSAARALLRHSTLPARELALESMKIASEICVYTNDHFVVETL 178


>gi|296105370|ref|YP_003615516.1| ATP-dependent HslUV protease, peptidase subunit HslV [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295059829|gb|ADF64567.1| ATP-dependent HslUV protease, peptidase subunit HslV [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 176

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 135/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T  +A +IA KA+ IA DIC+YTNHN  +E L   
Sbjct: 122 AIGSGGPYAQAAARALLENTDMNARDIAVKALDIAGDICIYTNHNHTIEELTSK 175


>gi|103487079|ref|YP_616640.1| ATP-dependent protease peptidase subunit [Sphingopyxis alaskensis
           RB2256]
 gi|98977156|gb|ABF53307.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Sphingopyxis alaskensis RB2256]
          Length = 188

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 116/183 (63%), Positives = 146/183 (79%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
               A   H TTIL+ R +G VV+ GDGQVS+GQTVMK NARKVRRL  G++I GFAG++
Sbjct: 5   HAQSAAPWHGTTILSARNEGKVVVIGDGQVSMGQTVMKPNARKVRRLHDGSVIGGFAGAT 64

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTL ERLE KLE++  QLLR++VELAKDWR DKYLRNLEAM+++AD+ +TLVITG G
Sbjct: 65  ADAFTLFERLEAKLERHNGQLLRAAVELAKDWRTDKYLRNLEAMMIVADREVTLVITGNG 124

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEP  G++AIGSGG++ALSAARAL   +   E +A+KAM++AA+ICVYTN    LET+
Sbjct: 125 DVLEPTGGIVAIGSGGNFALSAARALADYEKDPEVLAKKAMAVAAEICVYTNDQFTLETI 184

Query: 186 KVG 188
           ++ 
Sbjct: 185 EIQ 187


>gi|54307475|ref|YP_128495.1| ATP-dependent protease peptidase subunit [Photobacterium profundum
           SS9]
 gi|90413624|ref|ZP_01221614.1| ATP-dependent protease peptidase subunit [Photobacterium profundum
           3TCK]
 gi|62288342|sp|Q6LVI2|HSLV_PHOPR RecName: Full=ATP-dependent protease subunit HslV
 gi|46911895|emb|CAG18693.1| putative protease HslVU, subunit HslV [Photobacterium profundum
           SS9]
 gi|90325397|gb|EAS41886.1| ATP-dependent protease peptidase subunit [Photobacterium profundum
           3TCK]
          Length = 175

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 106/174 (60%), Positives = 139/174 (79%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   LL+S+VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAILAVADETGSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AA AL+ +T   A EIA K+++IA DICV+TNHN  +E L+  
Sbjct: 122 AIGSGGNFAQAAATALLENTDLGAREIAEKSLNIAGDICVFTNHNHTIEELETK 175


>gi|254508193|ref|ZP_05120318.1| ATP-dependent protease HslV [Vibrio parahaemolyticus 16]
 gi|219548915|gb|EED25915.1| ATP-dependent protease HslV [Vibrio parahaemolyticus 16]
          Length = 181

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 138/176 (78%), Gaps = 1/176 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL E+ 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           AIGSGG++A +AA AL+ +T+  A EIA K++ IA DICV+TNH+  +E L++  E
Sbjct: 122 AIGSGGNFAQAAATALLENTELDAREIAEKSLKIAGDICVFTNHHHTIEELEIPAE 177


>gi|296116620|ref|ZP_06835230.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295976832|gb|EFG83600.1| ATP-dependent protease peptidase subunit [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 197

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 116/187 (62%), Positives = 146/187 (78%), Gaps = 2/187 (1%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGS 64
           + H  +  H TTIL VR+D  V +AGDGQV+LG TV+K NARKVRR+G  G+I+AGFAG+
Sbjct: 7   NPHDPIGWHGTTILCVRRDNQVAMAGDGQVTLGATVIKGNARKVRRIGPSGSILAGFAGA 66

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTLLERLE KLE+YPNQL R+ VELAKDWR D+YLR LEAM+ +AD   +  +TG 
Sbjct: 67  TADAFTLLERLEAKLERYPNQLERACVELAKDWRTDRYLRRLEAMMAVADADHSYTLTGN 126

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLE 183
           GDVLEPE+G++AIGSGG+YALSAARAL+      A EIA ++M IA DICVYTN+++ +E
Sbjct: 127 GDVLEPEDGIIAIGSGGNYALSAARALLGIDGLGAREIAERSMKIAGDICVYTNYSVTVE 186

Query: 184 TLKVGDE 190
           TL    +
Sbjct: 187 TLGGDVD 193


>gi|88705212|ref|ZP_01102923.1| ATP-dependent protease HslV [Congregibacter litoralis KT71]
 gi|88700302|gb|EAQ97410.1| ATP-dependent protease HslV [Congregibacter litoralis KT71]
          Length = 179

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL VR+   VV+ GDGQVS+G T+MK NARKVRRL K  ++AGFAG +ADAFTL
Sbjct: 3   QFRGTTILCVRRGNSVVVGGDGQVSMGNTIMKGNARKVRRLYKDQVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E +LE++  QL+R++VELAK WR ++ LR LEA++ +ADK  +LVI+G GDV+EPE
Sbjct: 63  FELFEAQLEKHSGQLVRAAVELAKAWRTERSLRQLEALLAVADKETSLVISGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           N ++AIGSGGS+A +AA AL+ +T+ SA E+  K + IAADIC+YTN    +E L 
Sbjct: 123 NNLIAIGSGGSFAQAAAMALLDNTELSAREVVEKGLGIAADICIYTNQQRTIEQLD 178


>gi|114798299|ref|YP_760731.1| ATP-dependent protease peptidase subunit [Hyphomonas neptunium ATCC
           15444]
 gi|123128718|sp|Q0C0L2|HSLV_HYPNA RecName: Full=ATP-dependent protease subunit HslV
 gi|114738473|gb|ABI76598.1| ATP-dependent protease HslVU [Hyphomonas neptunium ATCC 15444]
          Length = 185

 Score =  180 bits (458), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 113/185 (61%), Positives = 146/185 (78%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +   +      H TT+L VRK+G +V+  DGQVS+GQT+MK NARKVRR+  G I+AGFA
Sbjct: 1   MTNPQDSKAIWHGTTVLAVRKNGKLVMLSDGQVSMGQTIMKGNARKVRRIAGGQILAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL ERLE KLE++P+QL R++VELAKDWR +KYL+ LEA++++ADK  TLVIT
Sbjct: 61  GATADAFTLFERLEAKLERFPDQLQRAAVELAKDWRTEKYLQKLEALLIVADKHSTLVIT 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
           G GDVLEPE+ V++IGSGG+YAL+AAR L   +  AE I RKAM IAADICVYTN +  +
Sbjct: 121 GAGDVLEPEHHVVSIGSGGNYALAAARGLYDYEEDAETIGRKAMQIAADICVYTNGHFSV 180

Query: 183 ETLKV 187
           ETL++
Sbjct: 181 ETLEI 185


>gi|330800877|ref|XP_003288459.1| hypothetical protein DICPUDRAFT_34073 [Dictyostelium purpureum]
 gi|325081518|gb|EGC35031.1| hypothetical protein DICPUDRAFT_34073 [Dictyostelium purpureum]
          Length = 330

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 107/182 (58%), Positives = 137/182 (75%), Gaps = 1/182 (0%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               +M +TTIL+VR++G VVI GDGQ +LG +++K NA+K+R+L  G IIAGFAGS  D
Sbjct: 60  SDPYRMKSTTILSVRRNGKVVIIGDGQCTLGHSIVKPNAKKIRKLADGKIIAGFAGSVGD 119

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL E LEKKL ++   LL+S VELA+ WR DKY R LEA I++ADK ITL + G GDV
Sbjct: 120 AFTLFELLEKKLAEHRGLLLKSCVELAQQWRTDKYYRRLEASIIVADKDITLTLDGNGDV 179

Query: 128 LEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           LEP +G++AIGSGG +ALSAARAL++      EEIA+++M IAADIC+YTNHN V+E L 
Sbjct: 180 LEPNDGILAIGSGGDFALSAARALLTVPDIDPEEIAKRSMKIAADICIYTNHNFVMEVLT 239

Query: 187 VG 188
             
Sbjct: 240 SD 241


>gi|11513631|pdb|1E94|A Chain A, Hslv-Hslu From E.Coli
 gi|11513632|pdb|1E94|B Chain B, Hslv-Hslu From E.Coli
 gi|11513633|pdb|1E94|C Chain C, Hslv-Hslu From E.Coli
 gi|11513634|pdb|1E94|D Chain D, Hslv-Hslu From E.Coli
 gi|13399753|pdb|1G4A|B Chain B, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
           Reveal An Atp-Dependent Proteolysis Mechanism
 gi|13399754|pdb|1G4A|A Chain A, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
           Reveal An Atp-Dependent Proteolysis Mechanism
 gi|13399755|pdb|1G4A|D Chain D, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
           Reveal An Atp-Dependent Proteolysis Mechanism
 gi|13399756|pdb|1G4A|C Chain C, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
           Reveal An Atp-Dependent Proteolysis Mechanism
 gi|13399761|pdb|1G4B|M Chain M, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
           Reveal An Atp-Dependent Proteolysis Mechanism
 gi|13399762|pdb|1G4B|N Chain N, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
           Reveal An Atp-Dependent Proteolysis Mechanism
 gi|13399763|pdb|1G4B|O Chain O, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
           Reveal An Atp-Dependent Proteolysis Mechanism
 gi|13399764|pdb|1G4B|P Chain P, Crystal Structures Of The Hslvu Peptidase-Atpase Complex
           Reveal An Atp-Dependent Proteolysis Mechanism
 gi|17942583|pdb|1HT2|A Chain A, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942584|pdb|1HT2|B Chain B, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942587|pdb|1HT2|C Chain C, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942588|pdb|1HT2|D Chain D, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942589|pdb|1HT2|I Chain I, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942590|pdb|1HT2|J Chain J, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942593|pdb|1HT2|K Chain K, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942594|pdb|1HT2|L Chain L, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942595|pdb|1HT1|C Chain C, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942596|pdb|1HT1|D Chain D, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942597|pdb|1HT1|V Chain V, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942598|pdb|1HT1|X Chain X, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942599|pdb|1HT1|A Chain A, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942600|pdb|1HT1|B Chain B, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942601|pdb|1HT1|Z Chain Z, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942602|pdb|1HT1|Y Chain Y, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942607|pdb|1HQY|A Chain A, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942608|pdb|1HQY|B Chain B, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942609|pdb|1HQY|C Chain C, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
 gi|17942610|pdb|1HQY|D Chain D, Nucleotide-Dependent Conformational Changes In A Protease-
           Associated Atpase Hslu
          Length = 175

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 1   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 61  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 120

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH   +E L
Sbjct: 121 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 171


>gi|120553751|ref|YP_958102.1| ATP-dependent protease peptidase subunit [Marinobacter aquaeolei
           VT8]
 gi|166222985|sp|A1TYU6|HSLV_MARAV RecName: Full=ATP-dependent protease subunit HslV
 gi|120323600|gb|ABM17915.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Marinobacter aquaeolei VT8]
          Length = 176

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 108/175 (61%), Positives = 137/175 (78%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  V + GDGQVSLG TVMK NARKVRRL  G +IAGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRENEVAMGGDGQVSLGNTVMKGNARKVRRLYNGQVIAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62  EAQLEKHQGNLTRAAVELAKDWRTDRALRKLEALLAVADKTASLIITGNGDVIEPEQGLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           AIGSGG +A +AARAL+ +T+ SA EIA KA+ IA DIC+YTN N  LE L + D
Sbjct: 122 AIGSGGPFAQAAARALLENTELSAHEIAEKALEIAGDICIYTNQNRTLEVLPIKD 176


>gi|159045980|ref|YP_001534774.1| ATP-dependent protease peptidase subunit [Dinoroseobacter shibae
           DFL 12]
 gi|189028447|sp|A8LPA8|HSLV_DINSH RecName: Full=ATP-dependent protease subunit HslV
 gi|157913740|gb|ABV95173.1| ATP-dependent HslUV protease [Dinoroseobacter shibae DFL 12]
          Length = 185

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 117/186 (62%), Positives = 144/186 (77%), Gaps = 3/186 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M +  +    H TTI+ V+K+G VV+AGDGQVSLGQTV+K  ARKVRRL  G  +++AGF
Sbjct: 1   MTETSFP-GWHGTTIIGVKKNGKVVVAGDGQVSLGQTVIKGTARKVRRLTPGGHDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R++VELAKDWR DKYL+ LEAM+++ D ++ LVI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLQRAAVELAKDWRTDKYLQKLEAMLIVTDGSLLLVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ + AIGSGG++AL+AAR LM     AE IARKAM IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDIAAIGSGGNFALAAARGLMEADFDAETIARKAMQIAADICVYTNGNLT 179

Query: 182 LETLKV 187
           +E +  
Sbjct: 180 VEAIDA 185


>gi|302381135|ref|YP_003816958.1| 20S proteasome A and subunit betas [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302191763|gb|ADK99334.1| 20S proteasome A and B subunits [Brevundimonas subvibrioides ATCC
           15264]
          Length = 189

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 116/175 (66%), Positives = 142/175 (81%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             H TTIL VRKDG  VIAGDGQVS+G T++K  ARKVR L  G ++AGFAG++ADAFTL
Sbjct: 10  DWHGTTILAVRKDGRTVIAGDGQVSMGATIVKGAARKVRTLAGGKVLAGFAGATADAFTL 69

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +ERLE KLEQYP+QL R+ V+LAKDWR D+YLR LEAM+L+ADK     +TG+GDVLEPE
Sbjct: 70  IERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKDAIFTVTGVGDVLEPE 129

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            GV A+GSGG+YAL+AARAL+ +T   AE +AR+AM+IAADICVYTN N+ +E L
Sbjct: 130 YGVAAVGSGGNYALAAARALIDNTDMDAEAVARRAMAIAADICVYTNGNLTVEIL 184


>gi|258514511|ref|YP_003190733.1| ATP-dependent protease peptidase subunit [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257778216|gb|ACV62110.1| 20S proteasome A and B subunits [Desulfotomaculum acetoxidans DSM
           771]
          Length = 176

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 104/175 (59%), Positives = 137/175 (78%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+KDG   IAGDGQV+ G  TV+K  ARK+RRL    I+AGFAGS ADAFTL
Sbjct: 2   FHATTIVAVQKDGKTAIAGDGQVTFGDRTVIKHKARKIRRLYNHKILAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L R++VELAK+WRMDK LR LEA++++ADK   LV++G G+V+EP+
Sbjct: 62  FEKFEAKLEEYNGNLQRAAVELAKEWRMDKILRRLEALLIVADKETMLVLSGGGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +GV+A+GSGG YAL+AAR L   TQ   +EI R+A+++AADICVYTN+NI++E +
Sbjct: 122 DGVIAVGSGGPYALAAARVLAKHTQLEPKEIVREALAVAADICVYTNNNIIVEEI 176


>gi|149925903|ref|ZP_01914166.1| ATP-dependent protease peptidase subunit [Limnobacter sp. MED105]
 gi|149825191|gb|EDM84402.1| ATP-dependent protease peptidase subunit [Limnobacter sp. MED105]
          Length = 187

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 135/179 (75%), Gaps = 1/179 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  V+K +ARKVRRL    I+AGFAG +ADAFTL
Sbjct: 3   QYHGTTILSVRRGKHVALGGDGQVTLGHIVVKGSARKVRRLHHNKILAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E +LE++   LLR++VELAK+WR D+ LR LEAM+ +AD+  +L+ITG GDVLEPE
Sbjct: 63  FEHFEAQLEKHQGHLLRAAVELAKEWRTDRMLRRLEAMLAVADENHSLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
            G++AIGSGG+YA SAA+AL+ +T+   EEI +K+++IA ++C+YTN +  +E L   +
Sbjct: 123 QGLVAIGSGGAYAHSAAKALLENTELLPEEIVKKSLTIAGELCIYTNQHHTIEVLGAPE 181


>gi|119385515|ref|YP_916571.1| ATP-dependent protease peptidase subunit [Paracoccus denitrificans
           PD1222]
 gi|189028453|sp|A1B5T1|HSLV_PARDP RecName: Full=ATP-dependent protease subunit HslV
 gi|119375282|gb|ABL70875.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Paracoccus denitrificans PD1222]
          Length = 184

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 118/184 (64%), Positives = 141/184 (76%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGF 61
           M +  +    H TTIL VR+ G VV+AGDGQVS+GQTVMK  ARKVRRL      ++ GF
Sbjct: 1   MSEDKFP-GWHGTTILAVRRAGRVVVAGDGQVSVGQTVMKGTARKVRRLNPGGHEVVVGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLEKKLE  P QL R+ V+LAKDWRMDKYLRNLEAM+++ D     V+
Sbjct: 60  AGSTADAFTLLERLEKKLEAAPGQLARACVDLAKDWRMDKYLRNLEAMLIVTDGRDIFVV 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR LM +   AE +ARKAM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGLMESDLDAEAVARKAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEVL 183


>gi|34495856|ref|NP_900071.1| ATP-dependent protease peptidase subunit [Chromobacterium violaceum
           ATCC 12472]
 gi|47605642|sp|Q7P113|HSLV_CHRVO RecName: Full=ATP-dependent protease subunit HslV
 gi|34101711|gb|AAQ58079.1| heat shock protein [Chromobacterium violaceum ATCC 12472]
          Length = 183

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 103/180 (57%), Positives = 137/180 (76%), Gaps = 1/180 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI++VR+   V + GDGQV+LG  V+KA ARK+R+L  G ++AGFAG +ADAFTL
Sbjct: 3   QFDGTTIVSVRRGERVALGGDGQVTLGNIVIKATARKIRKLHGGKVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +ER E KL+++   LL S+VELAKDWR D+ LR LEAM+++ADK  TL+ITG GDVLEPE
Sbjct: 63  IERFEAKLQKHQGNLLVSAVELAKDWRTDRMLRRLEAMLIVADKDHTLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
            G+ AIGSGG++A SAARAL  +T  + E + +K++ IA DIC+YTNHN ++ETL   DE
Sbjct: 123 QGIAAIGSGGAFAQSAARALFENTDLAPEVVVKKSLEIAGDICIYTNHNHLIETLGPDDE 182


>gi|260779593|ref|ZP_05888483.1| ATP-dependent protease HslV [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604402|gb|EEX30706.1| ATP-dependent protease HslV [Vibrio coralliilyticus ATCC BAA-450]
          Length = 181

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 138/176 (78%), Gaps = 1/176 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL E+ 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           AIGSGG++A +AA AL+ +T+  A +IA K++ IA DICV+TNH+  +E L++  E
Sbjct: 122 AIGSGGNFAQAAATALLENTELDARDIAEKSLKIAGDICVFTNHHHTIEELEIPAE 177


>gi|51246548|ref|YP_066432.1| ATP-dependent protease peptidase subunit [Desulfotalea psychrophila
           LSv54]
 gi|50877585|emb|CAG37425.1| probable ATP-dependent protease HslV, protease subunit
           [Desulfotalea psychrophila LSv54]
          Length = 198

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 98/184 (53%), Positives = 136/184 (73%), Gaps = 1/184 (0%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
            + +K    K+ +TTIL +R  G VV+AGDGQVS+G TVMK NARKVRRL    +I GFA
Sbjct: 15  TVKNKRDQEKIRSTTILAIRHKGEVVVAGDGQVSMGNTVMKHNARKVRRLYHDQVITGFA 74

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL ++LE+KLEQY   L+R++VELAK+WR DK LR LEA+++ ADK  +L+++
Sbjct: 75  GATADAFTLFDKLEEKLEQYNGNLMRAAVELAKEWRTDKMLRKLEALLIAADKDYSLLLS 134

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+E + GV++IGSGG Y   +A   + ++   A EIA+ +M IAADICV+TNH+  
Sbjct: 135 GTGDVIESDTGVLSIGSGGHYAQAAALALVHNSDLDAYEIAKASMKIAADICVFTNHSTT 194

Query: 182 LETL 185
           +E +
Sbjct: 195 IEKI 198


>gi|317494768|ref|ZP_07953180.1| proteasome A-type and B-type [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917370|gb|EFV38717.1| proteasome A-type and B-type [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 189

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 98/174 (56%), Positives = 131/174 (75%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 15  TTIVSVRRNGKVVIGGDGQATMGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 74

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 75  ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 134

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +A+RAL+ +T+ SA EI  KA+ IA DIC+YTN    +E L   
Sbjct: 135 AIGSGGPYAQAASRALLENTELSAREIVDKALGIAGDICIYTNQFHTIEELDSK 188


>gi|242241191|ref|YP_002989372.1| ATP-dependent protease peptidase subunit [Dickeya dadantii Ech703]
 gi|242133248|gb|ACS87550.1| 20S proteasome A and B subunits [Dickeya dadantii Ech703]
          Length = 176

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 100/171 (58%), Positives = 131/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+ SA EI  KA+ IA DIC+YTN    +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIVEKALGIAGDICIYTNQFHTIEEL 172


>gi|146296274|ref|YP_001180045.1| ATP-dependent protease peptidase subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|189028423|sp|A4XIW9|HSLV_CALS8 RecName: Full=ATP-dependent protease subunit HslV
 gi|145409850|gb|ABP66854.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 176

 Score =  180 bits (457), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 93/175 (53%), Positives = 126/175 (72%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V IAGDGQV+     +MK NA+KVR++  G ++ GFAGS ADA TL
Sbjct: 2   FHATTIVAVKKGEKVAIAGDGQVTFSQNMIMKQNAKKVRKVYNGKVLVGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+KLEQ    L +S VELAK+WR DK LR LEA++++A+     V++G G+V+EP+
Sbjct: 62  CEKFEEKLEQNSGNLQKSVVELAKEWRQDKILRRLEALMIVANSEHLFVVSGSGEVVEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + + AIGSGG YAL+AARAL+ +T     EIA+KA+ IAA IC+YTN+NI +  L
Sbjct: 122 DNIAAIGSGGPYALAAARALVQNTNLEPAEIAKKALEIAASICIYTNNNITVLEL 176


>gi|292486620|ref|YP_003529490.1| ATP-dependent protease HslV [Erwinia amylovora CFBP1430]
 gi|292897855|ref|YP_003537224.1| ATP-dependent protease [Erwinia amylovora ATCC 49946]
 gi|291197703|emb|CBJ44798.1| ATP-dependent protease (heat shock protein) [Erwinia amylovora ATCC
           49946]
 gi|291552037|emb|CBA19074.1| ATP-dependent protease HslV [Erwinia amylovora CFBP1430]
 gi|312170683|emb|CBX78946.1| ATP-dependent protease HslV [Erwinia amylovora ATCC BAA-2158]
          Length = 176

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 99/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T   A +I  KA+ IA DIC+YTNHN+ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDIGARDIVEKALGIAGDICIYTNHNLTIEEL 172


>gi|312143682|ref|YP_003995128.1| 20S proteasome A and B subunits [Halanaerobium sp. 'sapolanicus']
 gi|311904333|gb|ADQ14774.1| 20S proteasome A and B subunits [Halanaerobium sp. 'sapolanicus']
          Length = 189

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 101/180 (56%), Positives = 133/180 (73%), Gaps = 2/180 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +  ATTI+ VR +  + +AGDGQV+LG TVMK+ A+KVRRL  G I+AGFAG+SADAFTL
Sbjct: 5   EFEATTIVAVRHNNCMALAGDGQVTLGNTVMKSTAKKVRRLYNGEILAGFAGTSADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L R++VELAK+WR DK LR LEA++++A+    L+I+G GDV+EP+
Sbjct: 65  FEKFEAKLEEYHGSLQRAAVELAKEWRTDKILRKLEALLIVANLEEILIISGNGDVIEPD 124

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
             + AIGSGG YA +AA AL +     SA +IAR+A+ IAA IC+YTN NI LE L  G+
Sbjct: 125 ANISAIGSGGPYARAAASALSNHGNDLSAGDIAREALQIAASICIYTNENITLEELDGGE 184


>gi|83648620|ref|YP_437055.1| ATP-dependent protease peptidase subunit [Hahella chejuensis KCTC
           2396]
 gi|123530767|sp|Q2S9P4|HSLV_HAHCH RecName: Full=ATP-dependent protease subunit HslV
 gi|83636663|gb|ABC32630.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Hahella
           chejuensis KCTC 2396]
          Length = 181

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 102/172 (59%), Positives = 134/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+DG V + GDGQVSLG TVMK NARKVRRL    +IAGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRDGKVAMGGDGQVSLGNTVMKGNARKVRRLYHNKVIAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ LR LEA++ +AD   +L+ITG GDV+EPEN ++
Sbjct: 62  EAQLEKHQGNLVRAAVELAKDWRTDRALRRLEALLAVADNKASLIITGNGDVIEPENSLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA +AARAL+ +T+  A +I +K++ IA DICV+TN N+ LE + 
Sbjct: 122 AIGSGGPYAQAAARALLENTELEASDIVKKSLVIAGDICVFTNQNLTLEEID 173


>gi|323498088|ref|ZP_08103092.1| ATP-dependent protease subunit HslV [Vibrio sinaloensis DSM 21326]
 gi|323316799|gb|EGA69806.1| ATP-dependent protease subunit HslV [Vibrio sinaloensis DSM 21326]
          Length = 180

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 99/173 (57%), Positives = 137/173 (79%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL E+ 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG++A +AA AL+ +T+  A +IA K++ IA DICV+TNH+  +E L++
Sbjct: 122 AIGSGGNFAQAAATALLENTELDARDIAEKSLKIAGDICVFTNHHHTIEELEI 174


>gi|319403620|emb|CBI77205.1| heat shock protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 193

 Score =  180 bits (457), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 128/183 (69%), Positives = 150/183 (81%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSS 65
           +H    M+ TTI+TVRK   VV+AGDGQVSLGQT+MK+NARKVRRLG  G +IAGFAG++
Sbjct: 3   EHKPDIMYGTTIVTVRKGNKVVMAGDGQVSLGQTIMKSNARKVRRLGKSGAVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+AD+  TL +TG+G
Sbjct: 63  ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADQKTTLALTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+GVMAIGSGG++ALSAAR LM     AE IA KAMSIAA ICVYTN N  +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDMDLDAETIASKAMSIAAKICVYTNDNFTIETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|148269542|ref|YP_001244002.1| ATP-dependent protease peptidase subunit [Thermotoga petrophila
           RKU-1]
 gi|170288217|ref|YP_001738455.1| 20S proteasome A and B subunits [Thermotoga sp. RQ2]
 gi|189036249|sp|A5IJQ3|HSLV_THEP1 RecName: Full=ATP-dependent protease subunit HslV
 gi|238065945|sp|B1L8X4|HSLV_THESQ RecName: Full=ATP-dependent protease subunit HslV
 gi|147735086|gb|ABQ46426.1| 20S proteasome, A and B subunits [Thermotoga petrophila RKU-1]
 gi|170175720|gb|ACB08772.1| 20S proteasome A and B subunits [Thermotoga sp. RQ2]
          Length = 176

 Score =  180 bits (456), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 95/175 (54%), Positives = 127/175 (72%), Gaps = 1/175 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +K H TTIL VR++G  V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA T
Sbjct: 1   MKFHGTTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMT 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +R E KL ++   L +++VELAKDWR D+ LR LEA++L+ADK    +I+G G+V++P
Sbjct: 61  LFDRFEAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQP 120

Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           ++   AIGSGG Y   +A   L +T  SA EI  KAM IA +IC+YTN NIV+E 
Sbjct: 121 DDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMMIAGEICIYTNQNIVIEE 175


>gi|254482630|ref|ZP_05095868.1| peptidase, T1 family [marine gamma proteobacterium HTCC2148]
 gi|214036989|gb|EEB77658.1| peptidase, T1 family [marine gamma proteobacterium HTCC2148]
          Length = 179

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR+   VVI GDGQVS+G TVMK NARKVRRL K  +IAGFAG +ADAFTL
Sbjct: 3   QYRGTTILSVRRGNSVVIGGDGQVSMGNTVMKGNARKVRRLYKDRVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E +L+++   L+R++VELAK WR ++ LR LEA++ +ADK  +LVITG GDV+EPE
Sbjct: 63  FELFEAQLDKHQGHLVRAAVELAKAWRTERALRQLEALLAVADKETSLVITGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + ++AIGSGG +A SAARAL+ +T+  A  +  K ++IA DIC+YTNHN  +E L 
Sbjct: 123 DNLIAIGSGGPFAQSAARALLDNTELDARSVVEKGLAIAGDICIYTNHNRTIEELT 178


>gi|254486874|ref|ZP_05100079.1| ATP-dependent protease HslV [Roseobacter sp. GAI101]
 gi|214043743|gb|EEB84381.1| ATP-dependent protease HslV [Roseobacter sp. GAI101]
          Length = 185

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 121/185 (65%), Positives = 143/185 (77%), Gaps = 3/185 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M  K +    H TTI+ V+K G VVIAGDGQVSLGQTV+K  ARKVRRL  G  +++AGF
Sbjct: 1   MSSKEFP-GWHGTTIIGVKKAGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D    LVI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGVELLVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG+YAL+AAR +M ++  AE IAR AM IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNYALAAARGMMDSERDAETIARDAMKIAADICVYTNGNLT 179

Query: 182 LETLK 186
           +E +K
Sbjct: 180 VEKIK 184


>gi|325291498|ref|YP_004277362.1| heat shock protein HslV [Agrobacterium sp. H13-3]
 gi|325059351|gb|ADY63042.1| heat shock protein HslV [Agrobacterium sp. H13-3]
          Length = 174

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 132/173 (76%), Positives = 155/173 (89%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL+RL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G +
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAI 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG+YA +AARA+M T  SAEE+ARK++ IAADICVYTNHN+V+ETL   
Sbjct: 122 AIGSGGNYAFAAARAMMDTDKSAEEVARKSLDIAADICVYTNHNLVIETLDAE 174


>gi|188532280|ref|YP_001906077.1| ATP-dependent protease peptidase subunit [Erwinia tasmaniensis
           Et1/99]
 gi|238065875|sp|B2VF49|HSLV_ERWT9 RecName: Full=ATP-dependent protease subunit HslV
 gi|188027322|emb|CAO95165.1| ATP-dependent protease HslV [Erwinia tasmaniensis Et1/99]
          Length = 176

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 99/174 (56%), Positives = 132/174 (75%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T   A +I  KA+ IA DIC+YTNHN+ +E L   
Sbjct: 122 AIGSGGPYAQAAARALLENTDIGARDIVEKALGIAGDICIYTNHNLTIEELSSK 175


>gi|251787765|ref|YP_003002486.1| ATP-dependent protease peptidase subunit [Dickeya zeae Ech1591]
 gi|271502449|ref|YP_003335475.1| 20S proteasome A and subunit Bs [Dickeya dadantii Ech586]
 gi|307128949|ref|YP_003880965.1| peptidase component of the HslUV protease [Dickeya dadantii 3937]
 gi|247536386|gb|ACT05007.1| 20S proteasome A and B subunits [Dickeya zeae Ech1591]
 gi|270346004|gb|ACZ78769.1| 20S proteasome A and B subunits [Dickeya dadantii Ech586]
 gi|306526478|gb|ADM96408.1| peptidase component of the HslUV protease [Dickeya dadantii 3937]
          Length = 176

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 99/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+ SA EI  K++ IA DIC+YTN    +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIVEKSLGIAGDICIYTNQFHTIEEL 172


>gi|110835105|ref|YP_693964.1| ATP-dependent protease peptidase subunit [Alcanivorax borkumensis
           SK2]
 gi|254429309|ref|ZP_05043016.1| peptidase, T1 family [Alcanivorax sp. DG881]
 gi|123345320|sp|Q0VMA6|HSLV_ALCBS RecName: Full=ATP-dependent protease subunit HslV
 gi|110648216|emb|CAL17692.1| heat shock protein HslV [Alcanivorax borkumensis SK2]
 gi|196195478|gb|EDX90437.1| peptidase, T1 family [Alcanivorax sp. DG881]
          Length = 180

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 105/177 (59%), Positives = 134/177 (75%), Gaps = 2/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI++VR+   VVI GDGQVSLG TVMK NARKVRRL  G +IAGFAG +ADAFTL
Sbjct: 3   QYRGTTIVSVRRGNNVVIGGDGQVSLGNTVMKGNARKVRRLFHGKVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E +LE++   L+R++VELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV+EPE
Sbjct: 63  FERFEAQLEKHQGHLVRAAVELAKDWRTDRALRRLEALLAVADKESSLIITGNGDVIEPE 122

Query: 132 -NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            +G++AIGSGG +A SAA AL+ +T   A +I  KA++IA DIC+YTNHN   E L 
Sbjct: 123 KDGLIAIGSGGPFAQSAATALLDNTDLPARDIVAKALTIAGDICIYTNHNHTFEELD 179


>gi|296133055|ref|YP_003640302.1| 20S proteasome A and B subunits [Thermincola sp. JR]
 gi|296031633|gb|ADG82401.1| 20S proteasome A and B subunits [Thermincola potens JR]
          Length = 180

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 102/175 (58%), Positives = 132/175 (75%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              TTI+ V+K G   IAGDGQV+ G   V+K  ARKVRRL    ++AGFAGS ADAFTL
Sbjct: 2   FKGTTIVAVKKGGQTAIAGDGQVTFGGNVVLKHQARKVRRLYNDKVLAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L R++VELAK+WRMDK LR LEA++++AD    L+I+G G+V+EP+
Sbjct: 62  FEKFEGKLEEYRGNLQRAAVELAKEWRMDKILRRLEALLIVADSKHLLIISGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + V AIGSGGSYAL+AARAL+  T+  A +IAR+A++IAA ICV+TN NIV+E L
Sbjct: 122 DDVAAIGSGGSYALAAARALIKFTELDAAKIAREALTIAASICVFTNDNIVVEEL 176


>gi|15804523|ref|NP_290563.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
           EDL933]
 gi|15834113|ref|NP_312886.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
           str. Sakai]
 gi|16131770|ref|NP_418367.1| peptidase component of the HslUV protease [Escherichia coli str.
           K-12 substr. MG1655]
 gi|24115226|ref|NP_709736.1| ATP-dependent protease peptidase subunit [Shigella flexneri 2a str.
           301]
 gi|26250699|ref|NP_756739.1| ATP-dependent protease peptidase subunit [Escherichia coli CFT073]
 gi|30064775|ref|NP_838946.1| ATP-dependent protease peptidase subunit [Shigella flexneri 2a str.
           2457T]
 gi|74314432|ref|YP_312851.1| ATP-dependent protease peptidase subunit [Shigella sonnei Ss046]
 gi|82546281|ref|YP_410228.1| ATP-dependent protease peptidase subunit [Shigella boydii Sb227]
 gi|82778892|ref|YP_405241.1| ATP-dependent protease peptidase subunit [Shigella dysenteriae
           Sd197]
 gi|89110097|ref|AP_003877.1| peptidase component of the HslUV protease [Escherichia coli str.
           K-12 substr. W3110]
 gi|110644268|ref|YP_671998.1| ATP-dependent protease peptidase subunit [Escherichia coli 536]
 gi|110807793|ref|YP_691313.1| ATP-dependent protease peptidase subunit [Shigella flexneri 5 str.
           8401]
 gi|157159294|ref|YP_001465426.1| ATP-dependent protease peptidase subunit [Escherichia coli E24377A]
 gi|157163407|ref|YP_001460725.1| ATP-dependent protease peptidase subunit [Escherichia coli HS]
 gi|168748768|ref|ZP_02773790.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4113]
 gi|168755618|ref|ZP_02780625.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4401]
 gi|168761682|ref|ZP_02786689.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4501]
 gi|168768236|ref|ZP_02793243.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4486]
 gi|168775230|ref|ZP_02800237.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4196]
 gi|168780851|ref|ZP_02805858.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4076]
 gi|168786790|ref|ZP_02811797.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC869]
 gi|168799485|ref|ZP_02824492.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC508]
 gi|170022057|ref|YP_001727011.1| ATP-dependent protease peptidase subunit [Escherichia coli ATCC
           8739]
 gi|170083402|ref|YP_001732722.1| peptidase component of the HslUV protease [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170680847|ref|YP_001746319.1| ATP-dependent protease peptidase subunit [Escherichia coli SMS-3-5]
 gi|170769655|ref|ZP_02904108.1| ATP-dependent protease HslV [Escherichia albertii TW07627]
 gi|187733880|ref|YP_001882627.1| ATP-dependent protease peptidase subunit [Shigella boydii CDC
           3083-94]
 gi|188494807|ref|ZP_03002077.1| ATP-dependent protease HslV [Escherichia coli 53638]
 gi|191166450|ref|ZP_03028281.1| ATP-dependent protease HslV [Escherichia coli B7A]
 gi|191172702|ref|ZP_03034240.1| ATP-dependent protease HslV [Escherichia coli F11]
 gi|193063996|ref|ZP_03045082.1| ATP-dependent protease HslV [Escherichia coli E22]
 gi|193067977|ref|ZP_03048942.1| ATP-dependent protease HslV [Escherichia coli E110019]
 gi|194427454|ref|ZP_03060003.1| ATP-dependent protease HslV [Escherichia coli B171]
 gi|194433271|ref|ZP_03065552.1| ATP-dependent protease HslV [Shigella dysenteriae 1012]
 gi|194438354|ref|ZP_03070445.1| ATP-dependent protease HslV [Escherichia coli 101-1]
 gi|195937576|ref|ZP_03082958.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
           str. EC4024]
 gi|208809711|ref|ZP_03252048.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4206]
 gi|208813249|ref|ZP_03254578.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4045]
 gi|208819868|ref|ZP_03260188.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4042]
 gi|209399609|ref|YP_002273452.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4115]
 gi|209921412|ref|YP_002295496.1| ATP-dependent protease peptidase subunit [Escherichia coli SE11]
 gi|215489263|ref|YP_002331694.1| ATP-dependent protease peptidase subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|217326046|ref|ZP_03442130.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. TW14588]
 gi|218551084|ref|YP_002384875.1| ATP-dependent protease peptidase subunit [Escherichia fergusonii
           ATCC 35469]
 gi|218556494|ref|YP_002389408.1| ATP-dependent protease peptidase subunit [Escherichia coli IAI1]
 gi|218697646|ref|YP_002405313.1| ATP-dependent protease peptidase subunit [Escherichia coli 55989]
 gi|218701363|ref|YP_002408992.1| ATP-dependent protease peptidase subunit [Escherichia coli IAI39]
 gi|218707558|ref|YP_002415077.1| ATP-dependent protease peptidase subunit [Escherichia coli UMN026]
 gi|238902998|ref|YP_002928794.1| peptidase component of the HslUV protease [Escherichia coli BW2952]
 gi|253775429|ref|YP_003038260.1| ATP-dependent protease peptidase subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254039193|ref|ZP_04873243.1| ATP-dependent protease hslV [Escherichia sp. 1_1_43]
 gi|254163882|ref|YP_003046990.1| ATP-dependent protease peptidase subunit [Escherichia coli B str.
           REL606]
 gi|254795934|ref|YP_003080771.1| ATP-dependent protease peptidase subunit [Escherichia coli O157:H7
           str. TW14359]
 gi|256021577|ref|ZP_05435442.1| ATP-dependent protease peptidase subunit [Shigella sp. D9]
 gi|256026030|ref|ZP_05439895.1| ATP-dependent protease peptidase subunit [Escherichia sp. 4_1_40B]
 gi|260846648|ref|YP_003224426.1| peptidase component HslV of the HslUV protease [Escherichia coli
           O103:H2 str. 12009]
 gi|260857667|ref|YP_003231558.1| peptidase component HslV of the HslUV protease [Escherichia coli
           O26:H11 str. 11368]
 gi|260870651|ref|YP_003237053.1| peptidase component HslV of the HslUV protease [Escherichia coli
           O111:H- str. 11128]
 gi|261223566|ref|ZP_05937847.1| peptidase component of the HslUV protease [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261257328|ref|ZP_05949861.1| peptidase component HslV of the HslUV protease [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291285347|ref|YP_003502165.1| ATP-dependent protease hslV [Escherichia coli O55:H7 str. CB9615]
 gi|293407552|ref|ZP_06651471.1| ATP-dependent protease peptidase subunit [Escherichia coli
           FVEC1412]
 gi|293413372|ref|ZP_06656033.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293417437|ref|ZP_06660061.1| ATP-dependent protease hslV [Escherichia coli B185]
 gi|293470245|ref|ZP_06664656.1| ATP-dependent protease hslV [Escherichia coli B088]
 gi|298383300|ref|ZP_06992893.1| ATP-dependent protease hslV [Escherichia coli FVEC1302]
 gi|301024061|ref|ZP_07187776.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 196-1]
 gi|306813804|ref|ZP_07447980.1| ATP-dependent protease peptidase subunit [Escherichia coli NC101]
 gi|307140630|ref|ZP_07499986.1| ATP-dependent protease peptidase subunit [Escherichia coli H736]
 gi|307315161|ref|ZP_07594742.1| 20S proteasome A and B subunits [Escherichia coli W]
 gi|331644670|ref|ZP_08345789.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli H736]
 gi|331649786|ref|ZP_08350866.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli M605]
 gi|331655630|ref|ZP_08356622.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli M718]
 gi|331660487|ref|ZP_08361421.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli TA206]
 gi|331665587|ref|ZP_08366485.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli TA143]
 gi|331670785|ref|ZP_08371621.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli TA271]
 gi|331675427|ref|ZP_08376177.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli TA280]
 gi|331680049|ref|ZP_08380711.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli H591]
 gi|331685672|ref|ZP_08386255.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli H299]
 gi|332282818|ref|ZP_08395231.1| ATP-dependent protease peptidase subunit [Shigella sp. D9]
 gi|67465546|sp|P0A7B8|HSLV_ECOLI RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|67465547|sp|P0A7B9|HSLV_ECOL6 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|67465548|sp|P0A7C0|HSLV_ECO57 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|67465551|sp|P0A7C1|HSLV_SHIFL RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|123048626|sp|Q0TAD2|HSLV_ECOL5 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|123146475|sp|Q0SY57|HSLV_SHIF8 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|123558117|sp|Q31U58|HSLV_SHIBS RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|123561282|sp|Q32AA5|HSLV_SHIDS RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|123615640|sp|Q3YV46|HSLV_SHISS RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|166918420|sp|A7ZUE7|HSLV_ECO24 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|166918421|sp|A8A738|HSLV_ECOHS RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|189028448|sp|B1IVE7|HSLV_ECOLC RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|226704540|sp|B7NU73|HSLV_ECO7I RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|226704541|sp|B7M6Y3|HSLV_ECO8A RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|226704542|sp|B7NFN1|HSLV_ECOLU RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|226704543|sp|B1LNN7|HSLV_ECOSM RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|226704544|sp|B7LUS2|HSLV_ESCF3 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|229486311|sp|B1XB98|HSLV_ECODH RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238065857|sp|B5YZ72|HSLV_ECO5E RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238065874|sp|B6I4S5|HSLV_ECOSE RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238691704|sp|B2TWC8|HSLV_SHIB3 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|254802412|sp|B7UNQ2|HSLV_ECO27 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|254802413|sp|B7LA29|HSLV_ECO55 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|259491387|sp|C5A099|HSLV_ECOBW RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|12518838|gb|AAG59127.1|AE005624_3 heat shock protein hslVU, proteasome-related peptidase subunit
           [Escherichia coli O157:H7 str. EDL933]
 gi|26111130|gb|AAN83313.1|AE016770_113 ATP-dependent protease hslV [Escherichia coli CFT073]
 gi|305035|gb|AAB03064.1| similar to S. cerevisiae potential proteasome component
           [Escherichia coli str. K-12 substr. MG1655]
 gi|1790367|gb|AAC76914.1| peptidase component of the HslUV protease [Escherichia coli str.
           K-12 substr. MG1655]
 gi|13364335|dbj|BAB38282.1| heat shock protein HslV [Escherichia coli O157:H7 str. Sakai]
 gi|24054511|gb|AAN45443.1| heat shock protein HslVU, proteasome-related peptidase subunit
           [Shigella flexneri 2a str. 301]
 gi|30043035|gb|AAP18757.1| heat shock protein HslVU, proteasome-related peptidase subunit
           [Shigella flexneri 2a str. 2457T]
 gi|73857909|gb|AAZ90616.1| heat shock protein hslVU, proteasome-related peptidase subunit
           [Shigella sonnei Ss046]
 gi|81243040|gb|ABB63750.1| heat shock protein hslVU, proteasome-related peptidase subunit
           [Shigella dysenteriae Sd197]
 gi|81247692|gb|ABB68400.1| heat shock protein hslVU, proteasome-related peptidase subunit
           [Shigella boydii Sb227]
 gi|85676128|dbj|BAE77378.1| peptidase component of the HslUV protease [Escherichia coli str.
           K12 substr. W3110]
 gi|110345860|gb|ABG72097.1| ATP-dependent protease HslV [Escherichia coli 536]
 gi|110617341|gb|ABF06008.1| ATP-dependent protease peptidase subunit [Shigella flexneri 5 str.
           8401]
 gi|157069087|gb|ABV08342.1| ATP-dependent protease HslV [Escherichia coli HS]
 gi|157081324|gb|ABV21032.1| ATP-dependent protease HslV [Escherichia coli E24377A]
 gi|169756985|gb|ACA79684.1| 20S proteasome A and B subunits [Escherichia coli ATCC 8739]
 gi|169891237|gb|ACB04944.1| peptidase component of the HslUV protease [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170121463|gb|EDS90394.1| ATP-dependent protease HslV [Escherichia albertii TW07627]
 gi|170518565|gb|ACB16743.1| ATP-dependent protease HslV [Escherichia coli SMS-3-5]
 gi|187430872|gb|ACD10146.1| ATP-dependent protease HslV [Shigella boydii CDC 3083-94]
 gi|187769205|gb|EDU33049.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4196]
 gi|188016747|gb|EDU54869.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4113]
 gi|188490006|gb|EDU65109.1| ATP-dependent protease HslV [Escherichia coli 53638]
 gi|189001578|gb|EDU70564.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4076]
 gi|189357142|gb|EDU75561.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4401]
 gi|189362680|gb|EDU81099.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4486]
 gi|189367910|gb|EDU86326.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4501]
 gi|189373271|gb|EDU91687.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC869]
 gi|189378008|gb|EDU96424.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC508]
 gi|190903550|gb|EDV63268.1| ATP-dependent protease HslV [Escherichia coli B7A]
 gi|190907006|gb|EDV66607.1| ATP-dependent protease HslV [Escherichia coli F11]
 gi|192929461|gb|EDV83069.1| ATP-dependent protease HslV [Escherichia coli E22]
 gi|192958597|gb|EDV89035.1| ATP-dependent protease HslV [Escherichia coli E110019]
 gi|194414494|gb|EDX30767.1| ATP-dependent protease HslV [Escherichia coli B171]
 gi|194418555|gb|EDX34643.1| ATP-dependent protease HslV [Shigella dysenteriae 1012]
 gi|194422791|gb|EDX38787.1| ATP-dependent protease HslV [Escherichia coli 101-1]
 gi|208729512|gb|EDZ79113.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4206]
 gi|208734526|gb|EDZ83213.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4045]
 gi|208739991|gb|EDZ87673.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4042]
 gi|209161009|gb|ACI38442.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC4115]
 gi|209752238|gb|ACI74426.1| essential cell division protein [Escherichia coli]
 gi|209752240|gb|ACI74427.1| essential cell division protein [Escherichia coli]
 gi|209752242|gb|ACI74428.1| essential cell division protein [Escherichia coli]
 gi|209752244|gb|ACI74429.1| essential cell division protein [Escherichia coli]
 gi|209752246|gb|ACI74430.1| essential cell division protein [Escherichia coli]
 gi|209914671|dbj|BAG79745.1| ATP-dependent protease peptidase subunit [Escherichia coli SE11]
 gi|215267335|emb|CAS11784.1| peptidase component of the HslUV protease [Escherichia coli O127:H6
           str. E2348/69]
 gi|217322267|gb|EEC30691.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. TW14588]
 gi|218354378|emb|CAV01137.1| peptidase component of the HslUV protease [Escherichia coli 55989]
 gi|218358625|emb|CAQ91275.1| peptidase component of the HslUV protease [Escherichia fergusonii
           ATCC 35469]
 gi|218363263|emb|CAR00908.1| peptidase component of the HslUV protease [Escherichia coli IAI1]
 gi|218371349|emb|CAR19181.1| peptidase component of the HslUV protease [Escherichia coli IAI39]
 gi|218434655|emb|CAR15588.1| peptidase component of the HslUV protease [Escherichia coli UMN026]
 gi|222035644|emb|CAP78389.1| ATP-dependent protease hslV [Escherichia coli LF82]
 gi|226838629|gb|EEH70658.1| ATP-dependent protease hslV [Escherichia sp. 1_1_43]
 gi|238861982|gb|ACR63980.1| peptidase component of the HslUV protease [Escherichia coli BW2952]
 gi|242379468|emb|CAQ34283.1| peptidase component of the HslVU protease, subunit of HslV hexamer
           and HslVU protease [Escherichia coli BL21(DE3)]
 gi|253326473|gb|ACT31075.1| 20S proteasome A and B subunits [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975783|gb|ACT41454.1| ATP-dependent protease peptidase subunit [Escherichia coli B str.
           REL606]
 gi|253979940|gb|ACT45610.1| ATP-dependent protease peptidase subunit [Escherichia coli
           BL21(DE3)]
 gi|254595334|gb|ACT74695.1| peptidase component of the HslUV protease [Escherichia coli O157:H7
           str. TW14359]
 gi|257756316|dbj|BAI27818.1| peptidase component HslV of the HslUV protease [Escherichia coli
           O26:H11 str. 11368]
 gi|257761795|dbj|BAI33292.1| peptidase component HslV of the HslUV protease [Escherichia coli
           O103:H2 str. 12009]
 gi|257767007|dbj|BAI38502.1| peptidase component HslV of the HslUV protease [Escherichia coli
           O111:H- str. 11128]
 gi|260451231|gb|ACX41653.1| 20S proteasome A and B subunits [Escherichia coli DH1]
 gi|281181002|dbj|BAI57332.1| ATP-dependent protease peptidase subunit [Escherichia coli SE15]
 gi|281603326|gb|ADA76310.1| ATP-dependent protease hslV [Shigella flexneri 2002017]
 gi|284924032|emb|CBG37131.1| ATP-dependent protease (heat shock protein) [Escherichia coli 042]
 gi|290765220|gb|ADD59181.1| ATP-dependent protease hslV [Escherichia coli O55:H7 str. CB9615]
 gi|291321455|gb|EFE60894.1| ATP-dependent protease hslV [Escherichia coli B088]
 gi|291425469|gb|EFE98508.1| ATP-dependent protease peptidase subunit [Escherichia coli
           FVEC1412]
 gi|291430957|gb|EFF03953.1| ATP-dependent protease hslV [Escherichia coli B185]
 gi|291468120|gb|EFF10618.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298276334|gb|EFI17854.1| ATP-dependent protease hslV [Escherichia coli FVEC1302]
 gi|299880565|gb|EFI88776.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 196-1]
 gi|305852802|gb|EFM53249.1| ATP-dependent protease peptidase subunit [Escherichia coli NC101]
 gi|306905420|gb|EFN35956.1| 20S proteasome A and B subunits [Escherichia coli W]
 gi|307556075|gb|ADN48850.1| ATP-dependent hslVU protease peptidase subunit HslV [Escherichia
           coli ABU 83972]
 gi|309704357|emb|CBJ03706.1| ATP-dependent protease (heat shock protein) [Escherichia coli ETEC
           H10407]
 gi|312948507|gb|ADR29334.1| ATP-dependent protease peptidase subunit [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315063263|gb|ADT77590.1| peptidase component of the HslUV protease [Escherichia coli W]
 gi|315138498|dbj|BAJ45657.1| ATP-dependent protease hslV [Escherichia coli DH1]
 gi|320198861|gb|EFW73459.1| ATP-dependent protease HslV [Escherichia coli EC4100B]
 gi|320639184|gb|EFX08815.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H7 str.
           G5101]
 gi|320644572|gb|EFX13629.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H- str.
           493-89]
 gi|320649895|gb|EFX18407.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H- str.
           H 2687]
 gi|320655296|gb|EFX23242.1| ATP-dependent protease subunit HslV [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320660923|gb|EFX28369.1| ATP-dependent protease subunit HslV [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320665988|gb|EFX33011.1| ATP-dependent protease subunit HslV [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323380672|gb|ADX52940.1| 20S proteasome A and B subunits [Escherichia coli KO11]
 gi|323934422|gb|EGB30835.1| proteasome A-type and B-type [Escherichia coli E1520]
 gi|323939014|gb|EGB35232.1| proteasome A-type and B-type [Escherichia coli E482]
 gi|323943670|gb|EGB39776.1| proteasome A-type and B-type [Escherichia coli H120]
 gi|323959299|gb|EGB54960.1| proteasome A-type and B-type [Escherichia coli H489]
 gi|323964285|gb|EGB59768.1| proteasome A-type and B-type [Escherichia coli M863]
 gi|323969684|gb|EGB64968.1| proteasome A-type and B-type [Escherichia coli TA007]
 gi|323974341|gb|EGB69470.1| proteasome A-type and B-type [Escherichia coli TW10509]
 gi|324111447|gb|EGC05428.1| proteasome A-type and B-type [Escherichia fergusonii B253]
 gi|324115666|gb|EGC09602.1| proteasome A-type and B-type [Escherichia coli E1167]
 gi|326342650|gb|EGD66423.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. 1125]
 gi|327250570|gb|EGE62278.1| ATP-dependent protease hslV [Escherichia coli STEC_7v]
 gi|330908253|gb|EGH36772.1| ATP-dependent protease HslV [Escherichia coli AA86]
 gi|331036132|gb|EGI08368.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli H736]
 gi|331041419|gb|EGI13569.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli M605]
 gi|331046731|gb|EGI18816.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli M718]
 gi|331052436|gb|EGI24473.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli TA206]
 gi|331057272|gb|EGI29262.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli TA143]
 gi|331062040|gb|EGI33963.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli TA271]
 gi|331067487|gb|EGI38892.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli TA280]
 gi|331072375|gb|EGI43708.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli H591]
 gi|331077143|gb|EGI48358.1| ATP-dependent protease HslV (Heat shock protein hslV) [Escherichia
           coli H299]
 gi|332105170|gb|EGJ08516.1| ATP-dependent protease peptidase subunit [Shigella sp. D9]
 gi|332345928|gb|AEE59262.1| ATP-dependent protease HslV [Escherichia coli UMNK88]
 gi|332751851|gb|EGJ82248.1| ATP-dependent protease hslV [Shigella flexneri K-671]
 gi|332752625|gb|EGJ83011.1| ATP-dependent protease hslV [Shigella flexneri 2747-71]
 gi|332998638|gb|EGK18235.1| ATP-dependent protease hslV [Shigella flexneri K-218]
 gi|333013911|gb|EGK33273.1| ATP-dependent protease hslV [Shigella flexneri K-304]
          Length = 176

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH   +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 172


>gi|310828088|ref|YP_003960445.1| 20S proteasome A and B [Eubacterium limosum KIST612]
 gi|308739822|gb|ADO37482.1| 20S proteasome A and B [Eubacterium limosum KIST612]
          Length = 177

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 102/176 (57%), Positives = 136/176 (77%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ VR +G V IAGDGQV++G+T +MKA A+KVR++    ++ GFAGS ADAFTL
Sbjct: 2   FHATTIVGVRHNGEVAIAGDGQVTMGETTIMKATAKKVRKIYNDQVLVGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E K+EQY   L R++VELAKDWR DK LR LEA++++ DK  TLV++G G+V+EP+
Sbjct: 62  CERFEHKIEQYNGNLQRAAVELAKDWRQDKALRKLEALLIVMDKKETLVLSGSGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + + AIGSGG+YALSAARAL      SA+EIA +++ IA++ICVYTN NI +E L+
Sbjct: 122 DDIAAIGSGGNYALSAARALKRHSNLSAKEIAHESLKIASEICVYTNDNIRVEELE 177


>gi|256823469|ref|YP_003147432.1| ATP-dependent protease peptidase subunit [Kangiella koreensis DSM
           16069]
 gi|256797008|gb|ACV27664.1| 20S proteasome A and B subunits [Kangiella koreensis DSM 16069]
          Length = 179

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 105/175 (60%), Positives = 135/175 (77%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR++G VVI GDGQVSLG T+MK NARKVRRL    +IAGFAG +ADAFTL
Sbjct: 3   QYRGTTILSVRRNGTVVIGGDGQVSLGNTIMKGNARKVRRLYNDQVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER EKKLE +  +L+R++VELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PE
Sbjct: 63  FERFEKKLEAHGGKLMRAAVELAKDWRTDRALRRLEALLAVADKENSLIITGNGDVIQPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + ++AIGSGG +A SAA+ALM  T  SA EI    ++IA D+C+YTNHN  +E L
Sbjct: 123 DDLIAIGSGGPFAQSAAKALMQKTDLSAREIVETGLTIAGDVCIYTNHNQTIEEL 177


>gi|83942013|ref|ZP_00954475.1| ATP-dependent protease hslV [Sulfitobacter sp. EE-36]
 gi|83953062|ref|ZP_00961784.1| ATP-dependent protease hslV [Sulfitobacter sp. NAS-14.1]
 gi|83842030|gb|EAP81198.1| ATP-dependent protease hslV [Sulfitobacter sp. NAS-14.1]
 gi|83847833|gb|EAP85708.1| ATP-dependent protease hslV [Sulfitobacter sp. EE-36]
          Length = 185

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 118/185 (63%), Positives = 143/185 (77%), Gaps = 3/185 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M  + +    H TTI+ V+KDG VVIAGDGQVSLGQTV+K  ARKVRRL  G  +++AGF
Sbjct: 1   MSKQEFP-GWHGTTIIGVKKDGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM++++D    LVI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGRELLVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG+YAL+AAR +M +   AE +AR AM IA+DICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHSVAAIGSGGNYALAAARGMMDSDRDAETVARDAMKIASDICVYTNGNLT 179

Query: 182 LETLK 186
           +E + 
Sbjct: 180 VEKIT 184


>gi|261254141|ref|ZP_05946714.1| ATP-dependent protease HslV [Vibrio orientalis CIP 102891]
 gi|260937532|gb|EEX93521.1| ATP-dependent protease HslV [Vibrio orientalis CIP 102891]
          Length = 180

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 100/173 (57%), Positives = 138/173 (79%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL E+ 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFEKF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG++A +AA AL+ +T+  A EIA K+++IA DICV+TNH+  +E L++
Sbjct: 122 AIGSGGNFAQAAATALLENTELDAREIAEKSLTIAGDICVFTNHHHTIEELEI 174


>gi|114564916|ref|YP_752430.1| ATP-dependent protease peptidase subunit [Shewanella frigidimarina
           NCIMB 400]
 gi|122298446|sp|Q07WM3|HSLV_SHEFN RecName: Full=ATP-dependent protease subunit HslV
 gi|114336209|gb|ABI73591.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Shewanella frigidimarina NCIMB 400]
          Length = 174

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 104/172 (60%), Positives = 131/172 (76%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   LL+S+VELAKDWR DK LR LEAM+++AD   +L+ITG GDV++PE  ++
Sbjct: 62  EAKLEMHQGHLLKSAVELAKDWRSDKMLRKLEAMLVVADTESSLIITGNGDVVQPEYDLI 121

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG+Y   SA   L +T+ SAEEIA K+++IA DICV+TN    +E L 
Sbjct: 122 AIGSGGNYAHASALALLQNTELSAEEIAEKSLTIAGDICVFTNQFKTIEKLD 173


>gi|49475019|ref|YP_033060.1| ATP-dependent protease peptidase subunit [Bartonella henselae str.
           Houston-1]
 gi|85542196|sp|Q6G5G1|HSLV_BARHE RecName: Full=ATP-dependent protease subunit HslV
 gi|49237824|emb|CAF27019.1| Heat shock protein hslV [Bartonella henselae str. Houston-1]
          Length = 193

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 129/183 (70%), Positives = 153/183 (83%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSS 65
           +H    M+ TTI+TVRK G VV+AGDGQVSLGQT+MK NARKVRRLG  G +IAGFAG++
Sbjct: 3   EHKPDIMYGTTIITVRKGGKVVMAGDGQVSLGQTIMKGNARKVRRLGKSGAVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK ITL +TG+G
Sbjct: 63  ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKITLALTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+G+MAIGSGG++ALSAARAL+     AE IARKAM+IAA ICVYTN +  +ETL
Sbjct: 123 DVLEPEDGIMAIGSGGNFALSAARALIDMDLDAETIARKAMNIAAKICVYTNDHFTIETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|319405091|emb|CBI78695.1| heat shock protein [Bartonella sp. AR 15-3]
          Length = 193

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 129/183 (70%), Positives = 152/183 (83%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSS 65
           +H    M+ TTI+TVRK   VV+AGDGQVSLGQT+MK+NARKVRRLGKG  +IAGFAG++
Sbjct: 3   EHKPDIMYGTTIVTVRKGNKVVMAGDGQVSLGQTIMKSNARKVRRLGKGGAVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+AD+  TL +TG+G
Sbjct: 63  ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADQKATLALTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+GVMAIGSGG++ALSAAR LM T   AE IA KAMSIAA ICVYTN +  +ETL
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDTDLDAETIACKAMSIAAKICVYTNDHFTIETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|170749485|ref|YP_001755745.1| ATP-dependent protease peptidase subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656007|gb|ACB25062.1| 20S proteasome A and B subunits [Methylobacterium radiotolerans JCM
           2831]
          Length = 191

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 123/183 (67%), Positives = 148/183 (80%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            D+    +MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG +I GFAG+
Sbjct: 9   DDRGAVPQMHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGAVIGGFAGA 68

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ ++L+++G 
Sbjct: 69  TADAFTLFERLEAKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVSLLLSGS 128

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           GDVLEPE+GVMAIGSGG+YAL+AARAL      AE I R+AM+IAA+ICVYTN N+V+E 
Sbjct: 129 GDVLEPESGVMAIGSGGNYALAAARALEEGDLDAEAIVRRAMAIAAEICVYTNGNLVIEA 188

Query: 185 LKV 187
           L  
Sbjct: 189 LDA 191


>gi|229007174|ref|NP_353083.3| ATP-dependent protease peptidase subunit [Agrobacterium tumefaciens
           str. C58]
 gi|21759163|sp|Q8UJ88|HSLV_AGRT5 RecName: Full=ATP-dependent protease subunit HslV
          Length = 174

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 131/173 (75%), Positives = 155/173 (89%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL+RL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G +
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAI 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG+YA +AARA+M T  SAEE+AR+++ IAADICVYTNHN+V+ETL   
Sbjct: 122 AIGSGGNYAFAAARAMMDTDKSAEEVARQSLDIAADICVYTNHNLVVETLDAE 174


>gi|149189184|ref|ZP_01867471.1| ATP-dependent protease peptidase subunit [Vibrio shilonii AK1]
 gi|148836938|gb|EDL53888.1| ATP-dependent protease peptidase subunit [Vibrio shilonii AK1]
          Length = 177

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 101/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AA AL+ +T   A EIA K++ IA DICV+TNH   +E L+  
Sbjct: 122 AIGSGGNFAQAAATALLENTDLDAREIAEKSLKIAGDICVFTNHYHTVEELESD 175


>gi|254439232|ref|ZP_05052726.1| peptidase, T1 family [Octadecabacter antarcticus 307]
 gi|198254678|gb|EDY78992.1| peptidase, T1 family [Octadecabacter antarcticus 307]
          Length = 186

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 122/178 (68%), Positives = 142/178 (79%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFT 70
            H TTI+ VRK G VVIAGDGQVS+GQTVMK  ARKVRRL  G  ++I GFAGS+ADAFT
Sbjct: 9   WHGTTIIGVRKGGEVVIAGDGQVSIGQTVMKGTARKVRRLTAGGNDVICGFAGSTADAFT 68

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLERLEKKLE  P QL R+SVELAKDWR DKYL+ LEAM++++D     VITG GDVLEP
Sbjct: 69  LLERLEKKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDLFVITGAGDVLEP 128

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           E  V AIGSGG++ALSA RALM    +AEEIAR+AM+IA+DICVYTN N+ +ET+K  
Sbjct: 129 EYDVTAIGSGGNFALSAGRALMDLDFTAEEIARRAMAIASDICVYTNGNLTVETIKHD 186


>gi|329848322|ref|ZP_08263350.1| ATP-dependent protease hslV [Asticcacaulis biprosthecum C19]
 gi|328843385|gb|EGF92954.1| ATP-dependent protease hslV [Asticcacaulis biprosthecum C19]
          Length = 184

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 116/181 (64%), Positives = 142/181 (78%), Gaps = 1/181 (0%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            + ++    H TTI+ VR++G  VIAGDGQVS+G T++K  ARKVR L  G +I GFAG+
Sbjct: 4   SESNFP-NWHGTTIVAVRQNGKTVIAGDGQVSMGATIVKGGARKVRALAGGKVITGFAGA 62

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTLLERLE KLE +P+QL R+ V+LAKDWR D+YLR LEAM+L+AD+   L +TG+
Sbjct: 63  TADAFTLLERLEAKLELFPDQLARACVDLAKDWRTDRYLRRLEAMLLVADRNHILTLTGV 122

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           GDVLEPE+GV AIGSGG YALSAARALM  +  AE IARKAM IAA ICVYTN ++ LET
Sbjct: 123 GDVLEPEDGVAAIGSGGVYALSAARALMEYEPDAEVIARKAMKIAASICVYTNDHLTLET 182

Query: 185 L 185
           L
Sbjct: 183 L 183


>gi|152981232|ref|YP_001354903.1| ATP-dependent protease peptidase subunit [Janthinobacterium sp.
           Marseille]
 gi|166222981|sp|A6T306|HSLV_JANMA RecName: Full=ATP-dependent protease subunit HslV
 gi|151281309|gb|ABR89719.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Janthinobacterium sp. Marseille]
          Length = 178

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+  +V + GDGQV+LG  VMK  ARKVR++  G ++ GFAG +ADAFTL
Sbjct: 3   QFHGTTILSVRRGNIVALGGDGQVTLGNIVMKGTARKVRKVYNGKVLVGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LER E KLE++   L+R+SVELAKDWR D+ LR LEAM+L+ADK  TL+ITG GDVLEP 
Sbjct: 63  LERFESKLEKHQGHLMRASVELAKDWRTDRMLRRLEAMLLVADKETTLIITGNGDVLEPN 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +G+ AIGSGG+YA SAA+AL  +T  S E+I +K+++IA ++C+YTN + ++ETL 
Sbjct: 123 DGIGAIGSGGTYAQSAAKALQENTDLSPEDIVKKSLTIAGELCIYTNLSHIIETLD 178


>gi|89052676|ref|YP_508127.1| ATP-dependent protease peptidase subunit [Jannaschia sp. CCS1]
 gi|122499800|sp|Q28W10|HSLV_JANSC RecName: Full=ATP-dependent protease subunit HslV
 gi|88862225|gb|ABD53102.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Jannaschia sp. CCS1]
          Length = 185

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 112/184 (60%), Positives = 142/184 (77%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M  + +    H TTI+ VRK G VV+AGDGQVSLG TV+K +ARKVRRL  G  +++ GF
Sbjct: 1   MAKEEFP-GWHGTTIIGVRKGGKVVVAGDGQVSLGPTVIKGSARKVRRLSPGGYDVVCGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D +   +I
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGSELYII 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ + AIGSGG++AL+AAR +M +   AE +AR AM+IA+DICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDIAAIGSGGNFALAAARGMMDSDKDAEAVARDAMAIASDICVYTNGNLT 179

Query: 182 LETL 185
           +ET+
Sbjct: 180 VETI 183


>gi|91213474|ref|YP_543460.1| ATP-dependent protease peptidase subunit [Escherichia coli UTI89]
 gi|117626198|ref|YP_859521.1| ATP-dependent protease peptidase subunit [Escherichia coli APEC O1]
 gi|218560999|ref|YP_002393912.1| ATP-dependent protease peptidase subunit [Escherichia coli S88]
 gi|218692216|ref|YP_002400428.1| ATP-dependent protease peptidase subunit [Escherichia coli ED1a]
 gi|237702965|ref|ZP_04533446.1| ATP-dependent protease peptidase subunit [Escherichia sp.
           3_2_53FAA]
 gi|122421650|sp|Q1R3Y5|HSLV_ECOUT RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|166221638|sp|A1AIA7|HSLV_ECOK1 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|226704539|sp|B7MI64|HSLV_ECO45 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|254802414|sp|B7MR21|HSLV_ECO81 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|91075048|gb|ABE09929.1| ATP-dependent hslVU protease peptidase subunit hslV [Escherichia
           coli UTI89]
 gi|115515322|gb|ABJ03397.1| ATP-dependent hslVU protease peptidase subunit hslV [Escherichia
           coli APEC O1]
 gi|218367768|emb|CAR05562.1| peptidase component of the HslUV protease [Escherichia coli S88]
 gi|218429780|emb|CAR10604.1| peptidase component of the HslUV protease [Escherichia coli ED1a]
 gi|226902902|gb|EEH89161.1| ATP-dependent protease peptidase subunit [Escherichia sp.
           3_2_53FAA]
 gi|294492730|gb|ADE91486.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           IHE3034]
 gi|307629007|gb|ADN73311.1| ATP-dependent protease peptidase subunit [Escherichia coli UM146]
 gi|323949422|gb|EGB45311.1| proteasome A-type and B-type [Escherichia coli H252]
 gi|323954297|gb|EGB50082.1| proteasome A-type and B-type [Escherichia coli H263]
          Length = 176

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 103/171 (60%), Positives = 135/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLIKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH   +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 172


>gi|157373024|ref|YP_001481013.1| ATP-dependent protease peptidase subunit [Serratia proteamaculans
           568]
 gi|166918423|sp|A8GL95|HSLV_SERP5 RecName: Full=ATP-dependent protease subunit HslV
 gi|157324788|gb|ABV43885.1| 20S proteasome A and B subunits [Serratia proteamaculans 568]
          Length = 176

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 98/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENSSLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARA++ +T+ SA EI  K+++IA DIC+YTNH   +E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTELSAREIVDKSLNIAGDICIYTNHFHTIEEL 172


>gi|149377309|ref|ZP_01895055.1| ATP-dependent protease peptidase subunit [Marinobacter algicola
           DG893]
 gi|149358406|gb|EDM46882.1| ATP-dependent protease peptidase subunit [Marinobacter algicola
           DG893]
          Length = 176

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 106/175 (60%), Positives = 133/175 (76%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR+D  V + GDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTILSVRRDDEVAMGGDGQVSLGNTVMKGNARKVRRLYNDKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62  EAQLEKHQGNLTRAAVELAKDWRTDRALRRLEALLAVADKTASLIITGNGDVIEPEQGLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           AIGSGG +A ++ARAL+ +T   A EI  K + IAADIC+YTNHN  LE L   D
Sbjct: 122 AIGSGGPFAQASARALLENTDLKANEIVEKGLDIAADICIYTNHNRTLEVLSAND 176


>gi|91762535|ref|ZP_01264500.1| ATP-dependent protease [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718337|gb|EAS84987.1| ATP-dependent protease [Candidatus Pelagibacter ubique HTCC1002]
          Length = 171

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 101/170 (59%), Positives = 136/170 (80%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ +RK+  VV+AGDGQVS+G TV+K+ A KVR++ K N+IAGFAGS+ADA TL ERL
Sbjct: 2   TTIVLIRKNNEVVVAGDGQVSMGNTVIKSTAAKVRKIEKRNVIAGFAGSTADALTLFERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE++   L R++VELAKDWR DKYLR LEA++ I DK  + +I+G GDVLEPE   +
Sbjct: 62  EAKLEKHAGNLPRAAVELAKDWRTDKYLRRLEALMAIGDKENSFIISGTGDVLEPEGDAI 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            IGSGG+YAL+AA+ L+ T  SAEE+A+KA+ +A++ICV+TN+NI +E +
Sbjct: 122 GIGSGGNYALAAAKVLLDTDLSAEEVAKKAIQVASEICVFTNNNIKIEKI 171


>gi|49473862|ref|YP_031904.1| ATP-dependent protease peptidase subunit [Bartonella quintana str.
           Toulouse]
 gi|85542197|sp|Q6G0Q0|HSLV_BARQU RecName: Full=ATP-dependent protease subunit HslV
 gi|49239365|emb|CAF25698.1| Heat shock protein hslV [Bartonella quintana str. Toulouse]
          Length = 193

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 128/183 (69%), Positives = 150/183 (81%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSS 65
           +H    M+ TTI+TVRK G VVIAGDGQVS GQT+MK NARKVRRLG  G +IAGFAG++
Sbjct: 3   EHKPDIMYGTTIITVRKGGKVVIAGDGQVSFGQTIMKGNARKVRRLGKSGTVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+ADK ITL +TG+G
Sbjct: 63  ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADKKITLALTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+G+MAIGSGG++ALSAA AL+     AE IARKAM IAA ICVYTN +  +ETL
Sbjct: 123 DVLEPEDGIMAIGSGGNFALSAAWALVDMNLDAETIARKAMDIAAKICVYTNDHFTIETL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|71083040|ref|YP_265759.1| ATP-dependent protease peptidase subunit [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|71062153|gb|AAZ21156.1| ATP-dependent protease [Candidatus Pelagibacter ubique HTCC1062]
          Length = 171

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 102/170 (60%), Positives = 136/170 (80%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ +RK+  VV+AGDGQVS+G TV+K+ A KVR++ K N+IAGFAGS+ADA TL ERL
Sbjct: 2   TTIVLIRKNNEVVVAGDGQVSMGNTVIKSTAAKVRKIEKRNVIAGFAGSTADALTLFERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE++   L R++VELAKDWR DKYLR LEA++ I DK  + +I+G GDVLEPE   +
Sbjct: 62  EAKLEKHAGNLPRAAVELAKDWRTDKYLRRLEALMAIGDKENSFIISGTGDVLEPEGDAI 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            IGSGG+YAL+AA+ L+ T  SAEE+ARKA+ +A++ICV+TN+NI +E +
Sbjct: 122 GIGSGGNYALAAAKVLLDTDLSAEEVARKAIQVASEICVFTNNNIKIEKI 171


>gi|56461558|ref|YP_156839.1| ATP-dependent protease peptidase subunit [Idiomarina loihiensis
           L2TR]
 gi|81599956|sp|Q5QV35|HSLV_IDILO RecName: Full=ATP-dependent protease subunit HslV
 gi|56180568|gb|AAV83290.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Idiomarina
           loihiensis L2TR]
          Length = 185

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 104/170 (61%), Positives = 133/170 (78%), Gaps = 1/170 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VVI GDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGDKVVIGGDGQVSLGNTVMKGNARKVRRLYHDKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLEQ+   L+R++VELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PEN ++
Sbjct: 62  ESKLEQHQGNLMRAAVELAKDWRTDRALRRLEALLAVADKETSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG +A SAARAL+ +T  +A +I +KA++IA DICVYTN N  +E 
Sbjct: 122 AIGSGGPFAQSAARALLENTDLNARDIVQKALTIAGDICVYTNGNQTIEE 171


>gi|260913428|ref|ZP_05919907.1| ATP-dependent protease HslV [Pasteurella dagmatis ATCC 43325]
 gi|260632502|gb|EEX50674.1| ATP-dependent protease HslV [Pasteurella dagmatis ATCC 43325]
          Length = 176

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++PE + +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++ALSAARAL+ +T  SA EI  K++ IA DICVYTN N  +E L
Sbjct: 122 LAIGSGGNFALSAARALVENTDLSAREIVEKSLKIAGDICVYTNTNFTIEEL 173


>gi|56476922|ref|YP_158511.1| ATP-dependent protease peptidase subunit [Aromatoleum aromaticum
           EbN1]
 gi|81598845|sp|Q5P502|HSLV_AZOSE RecName: Full=ATP-dependent protease subunit HslV
 gi|56312965|emb|CAI07610.1| putative heat shock protein [Aromatoleum aromaticum EbN1]
          Length = 179

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 104/176 (59%), Positives = 135/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  V+KA ARKVR + +G I+AGFAG +ADAFTL
Sbjct: 3   QYHGTTILSVRRGRRVALGGDGQVTLGNVVIKATARKVRPIYQGRILAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   +LRS+VELAKDWR D+ LR LEAM+ +AD   +LVITG GDVLEPE
Sbjct: 63  FERFEAKLEKHQGNVLRSAVELAKDWRTDRMLRRLEAMLAVADPDNSLVITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G++AIGSGG+YA SAARAL+ +T    EEI +K++ IA D+C+YTN + V+E L+
Sbjct: 123 QGIVAIGSGGAYAQSAARALLENTALPPEEIVKKSLQIAGDLCIYTNQSHVIEVLE 178


>gi|254452129|ref|ZP_05065566.1| ATP-dependent protease HslV [Octadecabacter antarcticus 238]
 gi|198266535|gb|EDY90805.1| ATP-dependent protease HslV [Octadecabacter antarcticus 238]
          Length = 186

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 122/178 (68%), Positives = 144/178 (80%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFT 70
            H TTI+ VRK G VVIAGDGQVS+GQTVMK  ARKVRRL  G  ++I GFAGS+ADAFT
Sbjct: 9   WHGTTIIGVRKGGEVVIAGDGQVSVGQTVMKGTARKVRRLTAGGSDVICGFAGSTADAFT 68

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLERLEKKLE  P QL R+SVELAK+WR DKYL+ LEAM++++D    LVITG GDVLEP
Sbjct: 69  LLERLEKKLEATPGQLARASVELAKEWRTDKYLQKLEAMLIVSDGKDLLVITGAGDVLEP 128

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           E  V AIGSGG++AL+A RALM  + SAEEIAR+AM+IA+DICVYTN N+ +ET+K  
Sbjct: 129 EYDVTAIGSGGNFALAAGRALMDLEFSAEEIARRAMAIASDICVYTNGNLTVETIKHD 186


>gi|229593534|ref|YP_001454589.2| ATP-dependent protease peptidase subunit [Citrobacter koseri ATCC
           BAA-895]
          Length = 176

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 172


>gi|311281624|ref|YP_003943855.1| 20S proteasome A and B subunits [Enterobacter cloacae SCF1]
 gi|308750819|gb|ADO50571.1| 20S proteasome A and B subunits [Enterobacter cloacae SCF1]
          Length = 176

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 101/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T+ SA +IA KA+ IA DIC+YTNH   +E L   
Sbjct: 122 AIGSGGPYAQAAARALLENTEMSARDIAVKALDIAGDICIYTNHFHTIEELTSK 175


>gi|300024850|ref|YP_003757461.1| 20S proteasome A and subunit betas [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526671|gb|ADJ25140.1| 20S proteasome A and B subunits [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 190

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 131/176 (74%), Positives = 150/176 (85%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             HATTILTVRKDG VV+AGDGQVSLGQTV+K+NARKVRRLGKG++I GFAG++ADAFTL
Sbjct: 12  SWHATTILTVRKDGKVVVAGDGQVSLGQTVIKSNARKVRRLGKGDVIGGFAGATADAFTL 71

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++AD T TLV+TG GDVLEPE
Sbjct: 72  FERLEAKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMIVADATTTLVLTGTGDVLEPE 131

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           N +  IGSGG+YAL+AARAL+     AE IARKAMSIAA+ICVYTN NIV+ETL  
Sbjct: 132 NAIAGIGSGGNYALAAARALLDQPLDAEAIARKAMSIAAEICVYTNSNIVVETLDA 187


>gi|37528577|ref|NP_931922.1| ATP-dependent protease peptidase subunit [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|47605635|sp|Q7MYC2|HSLV_PHOLL RecName: Full=ATP-dependent protease subunit HslV
 gi|36788015|emb|CAE17134.1| ATP-dependent protease HslV (heat shock protein) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 176

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 99/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATMGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENTSLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG +A SAARA++ +T   A +IA KA++IA DIC+YTNHN   E L
Sbjct: 122 AIGSGGPFAQSAARAMLENTDLGARQIAEKALTIAGDICIYTNHNHNFEEL 172


>gi|325183742|emb|CCA18201.1| ATPdependent protease hslV putative [Albugo laibachii Nc14]
          Length = 221

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 109/178 (61%), Positives = 141/178 (79%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MH TTIL V+K+G V + GDGQVSLG TV+K NA+KVRR+    I+AGFAGS+ADAFTL+
Sbjct: 45  MHGTTILCVKKEGKVCLIGDGQVSLGHTVVKPNAKKVRRI-NDTILAGFAGSTADAFTLM 103

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLE++P QL R+ VELAK+WRMDKYLR+LEA+++++D   +  +TG GDV+EP +
Sbjct: 104 ERLESKLEEHPGQLTRACVELAKNWRMDKYLRHLEAILIVSDLEQSYTLTGNGDVVEPHD 163

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           G++  GSGG YAL+AARAL+      AE + RKAM+IAADICVYTNHN V+E L+  +
Sbjct: 164 GIIGTGSGGHYALAAARALIDQPGLDAEAVGRKAMNIAADICVYTNHNFVVEILEKKE 221


>gi|302392402|ref|YP_003828222.1| ATP dependent peptidase CodWX, CodW component [Acetohalobium
           arabaticum DSM 5501]
 gi|302204479|gb|ADL13157.1| ATP dependent peptidase CodWX, CodW component [Acetohalobium
           arabaticum DSM 5501]
          Length = 175

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 92/174 (52%), Positives = 130/174 (74%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATT++ V++   V IAGDGQV++  TVMK  A+KVRRL  G ++AGFAGS+AD FTL 
Sbjct: 2   FEATTVVAVKQGKKVAIAGDGQVTMKHTVMKHKAKKVRRLYNGEVLAGFAGSAADGFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ E K+E++   L R++VELAK+WR DK LR LEA++++A+    LVI+G GDV+EP++
Sbjct: 62  EKFEAKIEEFQGNLQRAAVELAKEWRTDKMLRKLEALLIVANDEHLLVISGSGDVIEPDD 121

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            V AIGSGG YAL+A RAL+  ++    +IA++A+ IA+DIC+YTN NI +E +
Sbjct: 122 DVTAIGSGGPYALAATRALLEYSELEPADIAKQALKIASDICIYTNDNITVEEI 175


>gi|237728046|ref|ZP_04558527.1| heat shock protein [Citrobacter sp. 30_2]
 gi|226910303|gb|EEH96221.1| heat shock protein [Citrobacter sp. 30_2]
          Length = 176

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L   
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEELNSK 175


>gi|163859117|ref|YP_001633415.1| ATP-dependent protease peptidase subunit [Bordetella petrii DSM
           12804]
 gi|229486309|sp|A9IH51|HSLV_BORPD RecName: Full=ATP-dependent protease subunit HslV
 gi|163262845|emb|CAP45148.1| ATP-dependent protease heat shock protein [Bordetella petrii]
          Length = 179

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 96/175 (54%), Positives = 131/175 (74%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + HATTI+ VR+   V + GDGQV+LG  V+K  ARK+RRL    I+AGFAG++ADAFTL
Sbjct: 3   QFHATTIVCVRRGNKVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+R++VEL +DWR D+ LR LEAM+++AD   TLV+TG GDVLEPE
Sbjct: 63  QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG+Y   +A   L +T+ S ++I ++++ IA DIC+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELSPQDIVKQSLEIAGDICIYTNQNHVIETL 177


>gi|254285866|ref|ZP_04960828.1| protease HslVU, subunit HslV [Vibrio cholerae AM-19226]
 gi|150424048|gb|EDN15987.1| protease HslVU, subunit HslV [Vibrio cholerae AM-19226]
          Length = 185

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 102/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG+YA +AA AL+ +T+  A  IA KA++IA DICV+TNH+  +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELEI 174


>gi|260431949|ref|ZP_05785920.1| ATP-dependent protease HslV [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415777|gb|EEX09036.1| ATP-dependent protease HslV [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 185

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 119/184 (64%), Positives = 143/184 (77%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M +  +    H TTI+ V+K G VVIAGDGQVSLGQTV+K  ARKVRRL  G   I+AGF
Sbjct: 1   MAENDFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFEIVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGVDMFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AARA+M +  SAE++AR AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARAMMDSDKSAEQVARDAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VERI 183


>gi|217425069|ref|ZP_03456565.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           pseudomallei 576]
 gi|226199822|ref|ZP_03795373.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia pseudomallei Pakistan 9]
 gi|237810381|ref|YP_002894832.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia pseudomallei MSHR346]
 gi|238563256|ref|ZP_00439196.2| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           mallei GB8 horse 4]
 gi|254174901|ref|ZP_04881562.1| protease HslVU, subunit HslV [Burkholderia mallei ATCC 10399]
 gi|254182214|ref|ZP_04888811.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia pseudomallei 1655]
 gi|254188140|ref|ZP_04894652.1| protease HslVU, subunit HslV [Burkholderia pseudomallei Pasteur
           52237]
 gi|254201828|ref|ZP_04908192.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia mallei FMH]
 gi|254207157|ref|ZP_04913508.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia mallei JHU]
 gi|147747722|gb|EDK54798.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia mallei FMH]
 gi|147752699|gb|EDK59765.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia mallei JHU]
 gi|157935820|gb|EDO91490.1| protease HslVU, subunit HslV [Burkholderia pseudomallei Pasteur
           52237]
 gi|160695946|gb|EDP85916.1| protease HslVU, subunit HslV [Burkholderia mallei ATCC 10399]
 gi|184212752|gb|EDU09795.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia pseudomallei 1655]
 gi|217392089|gb|EEC32115.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           pseudomallei 576]
 gi|225928173|gb|EEH24209.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia pseudomallei Pakistan 9]
 gi|237503704|gb|ACQ96022.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia pseudomallei MSHR346]
 gi|238521089|gb|EEP84543.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           mallei GB8 horse 4]
          Length = 211

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 36  QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 95

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 96  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 155

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA +AARAL  +T  S  EI  KA+ IA D+C+YTNHN ++ET++
Sbjct: 156 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 211


>gi|156973045|ref|YP_001443952.1| ATP-dependent protease peptidase subunit [Vibrio harveyi ATCC
           BAA-1116]
 gi|269959685|ref|ZP_06174065.1| ATP-dependent protease HslV [Vibrio harveyi 1DA3]
 gi|166223005|sp|A7MWJ4|HSLV_VIBHB RecName: Full=ATP-dependent protease subunit HslV
 gi|156524639|gb|ABU69725.1| hypothetical protein VIBHAR_00724 [Vibrio harveyi ATCC BAA-1116]
 gi|269835608|gb|EEZ89687.1| ATP-dependent protease HslV [Vibrio harveyi 1DA3]
          Length = 183

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 103/173 (59%), Positives = 136/173 (78%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG+YA +AA AL+ +T   A EIA KA++IA DICV+TNH+  +E L+ 
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELES 174


>gi|310822321|ref|YP_003954679.1| ATP-dependent protease hslv [Stigmatella aurantiaca DW4/3-1]
 gi|309395393|gb|ADO72852.1| ATP-dependent protease HslV [Stigmatella aurantiaca DW4/3-1]
          Length = 175

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 106/174 (60%), Positives = 138/174 (79%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TTIL VR++G VVIAGDGQVSL +T+MK  A+KVRR+G+GN++AGFAGS+ADAFTL 
Sbjct: 2   FHGTTILCVRREGKVVIAGDGQVSLDKTIMKNTAKKVRRIGEGNVLAGFAGSTADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E KL+++   L R+ VEL KDWR D++LR LEA++++AD+  T +++G GDV+EP++
Sbjct: 62  ERFEAKLKEHQKNLARACVELGKDWRTDRFLRRLEALLIVADREKTFILSGAGDVIEPDH 121

Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           G+ A+GSGG YALSAARAL   T  SA EIA  AM+IAADICVYTN ++  E L
Sbjct: 122 GIAAVGSGGHYALSAARALQAHTSLSAREIATHAMAIAADICVYTNSHVTFEEL 175


>gi|217969219|ref|YP_002354453.1| ATP-dependent protease peptidase subunit [Thauera sp. MZ1T]
 gi|217506546|gb|ACK53557.1| 20S proteasome A and B subunits [Thauera sp. MZ1T]
          Length = 178

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 105/176 (59%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR+   V + GDGQV+LG  V+KA+ARKVR L  G I+AGFAG +ADAFTL
Sbjct: 3   QYRGTTILSVRRGNRVALGGDGQVTLGNIVIKASARKVRTLYNGQILAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KL+++   LLRS+VELAKDWR D+ LR LEAM+ +AD+  +LVITG GDVLEPE
Sbjct: 63  FERFEAKLDKHQGNLLRSAVELAKDWRTDRMLRRLEAMLAVADREHSLVITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G++AIGSGG+YA SAARAL+ +T+    EI  KA+SIA D+C+YTNH+  +E L 
Sbjct: 123 QGIVAIGSGGAYAQSAARALLENTELEPREIVSKALSIAGDLCIYTNHHHTIEVLD 178


>gi|228879511|ref|YP_001572521.2| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|283787387|ref|YP_003367252.1| ATP-dependent protease (heat shock protein) [Citrobacter rodentium
           ICC168]
 gi|282950841|emb|CBG90518.1| ATP-dependent protease (heat shock protein) [Citrobacter rodentium
           ICC168]
          Length = 176

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L   
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEELTSK 175


>gi|291286264|ref|YP_003503080.1| 20S proteasome A and B subunits [Denitrovibrio acetiphilus DSM
           12809]
 gi|290883424|gb|ADD67124.1| 20S proteasome A and B subunits [Denitrovibrio acetiphilus DSM
           12809]
          Length = 178

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 1/177 (0%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
              M  TT++ V+KDG   I  DGQV+ G TV+K NA+KVR++    ++ GFAGS+ADAF
Sbjct: 2   PDMMKGTTVVAVKKDGKTAIGADGQVTFGNTVLKHNAKKVRKVYNNKVVCGFAGSTADAF 61

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL+ER E KLEQ+  QLLR++VELAKDWR D+YLR LEAM+++AD     ++TG GDV+E
Sbjct: 62  TLMERFEAKLEQHGGQLLRAAVELAKDWRTDRYLRKLEAMMIVADAEELYIMTGNGDVVE 121

Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P+NGV AIGSGG YA +AA A+  +T+ S  EI  KA+ IAA+IC+YTN NI++E +
Sbjct: 122 PQNGVAAIGSGGPYAQAAAIAMAENTELSPSEIVDKALHIAANICIYTNDNIIVEEI 178


>gi|270265176|ref|ZP_06193438.1| ATP-dependent protease hslV [Serratia odorifera 4Rx13]
 gi|270040810|gb|EFA13912.1| ATP-dependent protease hslV [Serratia odorifera 4Rx13]
          Length = 176

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 98/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADEHSSLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARA++ +T+ SA EI  K+++IA DIC+YTNH   +E L
Sbjct: 122 AIGSGGPYAQAAARAMLENTELSAREIVDKSLNIAGDICIYTNHFHTIEEL 172


>gi|83589877|ref|YP_429886.1| ATP-dependent protease peptidase subunit [Moorella thermoacetica
           ATCC 39073]
 gi|123524655|sp|Q2RJP6|HSLV_MOOTA RecName: Full=ATP-dependent protease subunit HslV
 gi|83572791|gb|ABC19343.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Moorella thermoacetica ATCC 39073]
          Length = 174

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 95/174 (54%), Positives = 129/174 (74%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  TT++ VR  G V +AGDGQV+ G TVMK  ARKVRRL +  ++AGFAGS ADAFTL 
Sbjct: 1   MEGTTVIAVRHQGRVALAGDGQVTFGNTVMKHKARKVRRLYQDRVLAGFAGSVADAFTLF 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ E KLE Y   L R++VEL K+WR D++LR LEA++++ADK   L+I+G G+++EP++
Sbjct: 61  EKFEAKLETYHGNLQRAAVELGKEWRTDRFLRRLEALLVVADKEHLLIISGNGEIVEPDD 120

Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           G+ AIGSGG Y   +A   +  T  +A EIAR+AM+IAA IC+YTN+NI++E L
Sbjct: 121 GIAAIGSGGPYALAAARALVAHTSMTAGEIAREAMNIAASICIYTNNNIIVEEL 174


>gi|15642670|ref|NP_232303.1| ATP-dependent protease peptidase subunit [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121590905|ref|ZP_01678227.1| protease HslVU, subunit HslV [Vibrio cholerae 2740-80]
 gi|121727582|ref|ZP_01680690.1| protease HslVU, subunit HslV [Vibrio cholerae V52]
 gi|147674179|ref|YP_001218164.1| ATP-dependent protease peptidase subunit [Vibrio cholerae O395]
 gi|153213965|ref|ZP_01949158.1| protease HslVU, subunit HslV [Vibrio cholerae 1587]
 gi|153819928|ref|ZP_01972595.1| protease HslVU, subunit HslV [Vibrio cholerae NCTC 8457]
 gi|153824209|ref|ZP_01976876.1| protease HslVU, subunit HslV [Vibrio cholerae B33]
 gi|227082791|ref|YP_002811342.1| protease HslVU, subunit HslV [Vibrio cholerae M66-2]
 gi|229507277|ref|ZP_04396782.1| ATP-dependent protease HslV [Vibrio cholerae BX 330286]
 gi|229509800|ref|ZP_04399281.1| ATP-dependent protease HslV [Vibrio cholerae B33]
 gi|229513595|ref|ZP_04403059.1| ATP-dependent protease HslV [Vibrio cholerae TMA 21]
 gi|229516924|ref|ZP_04406370.1| ATP-dependent protease HslV [Vibrio cholerae RC9]
 gi|229521740|ref|ZP_04411158.1| ATP-dependent protease HslV [Vibrio cholerae TM 11079-80]
 gi|229606783|ref|YP_002877431.1| ATP-dependent protease peptidase subunit [Vibrio cholerae MJ-1236]
 gi|254851212|ref|ZP_05240562.1| protease HslVU [Vibrio cholerae MO10]
 gi|255744364|ref|ZP_05418316.1| ATP-dependent protease HslV [Vibrio cholera CIRS 101]
 gi|262158526|ref|ZP_06029641.1| ATP-dependent protease HslV [Vibrio cholerae INDRE 91/1]
 gi|297581512|ref|ZP_06943435.1| protease HslVU [Vibrio cholerae RC385]
 gi|298500507|ref|ZP_07010311.1| protease HslVU [Vibrio cholerae MAK 757]
 gi|11133074|sp|Q9KNQ6|HSLV_VIBCH RecName: Full=ATP-dependent protease subunit HslV
 gi|172047533|sp|A5F4X4|HSLV_VIBC3 RecName: Full=ATP-dependent protease subunit HslV
 gi|254765621|sp|C3LSA4|HSLV_VIBCM RecName: Full=ATP-dependent protease subunit HslV
 gi|9657269|gb|AAF95816.1| protease HslVU, subunit HslV [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547227|gb|EAX57351.1| protease HslVU, subunit HslV [Vibrio cholerae 2740-80]
 gi|121630073|gb|EAX62478.1| protease HslVU, subunit HslV [Vibrio cholerae V52]
 gi|124115535|gb|EAY34355.1| protease HslVU, subunit HslV [Vibrio cholerae 1587]
 gi|126509526|gb|EAZ72120.1| protease HslVU, subunit HslV [Vibrio cholerae NCTC 8457]
 gi|126518267|gb|EAZ75492.1| protease HslVU, subunit HslV [Vibrio cholerae B33]
 gi|146316062|gb|ABQ20601.1| protease HslVU, subunit HslV [Vibrio cholerae O395]
 gi|227010679|gb|ACP06891.1| protease HslVU, subunit HslV [Vibrio cholerae M66-2]
 gi|227014563|gb|ACP10773.1| protease HslVU, subunit HslV [Vibrio cholerae O395]
 gi|229341334|gb|EEO06338.1| ATP-dependent protease HslV [Vibrio cholerae TM 11079-80]
 gi|229345987|gb|EEO10959.1| ATP-dependent protease HslV [Vibrio cholerae RC9]
 gi|229349472|gb|EEO14428.1| ATP-dependent protease HslV [Vibrio cholerae TMA 21]
 gi|229353274|gb|EEO18213.1| ATP-dependent protease HslV [Vibrio cholerae B33]
 gi|229354782|gb|EEO19703.1| ATP-dependent protease HslV [Vibrio cholerae BX 330286]
 gi|229369438|gb|ACQ59861.1| ATP-dependent protease HslV [Vibrio cholerae MJ-1236]
 gi|254846917|gb|EET25331.1| protease HslVU [Vibrio cholerae MO10]
 gi|255737889|gb|EET93282.1| ATP-dependent protease HslV [Vibrio cholera CIRS 101]
 gi|262029687|gb|EEY48336.1| ATP-dependent protease HslV [Vibrio cholerae INDRE 91/1]
 gi|297534350|gb|EFH73188.1| protease HslVU [Vibrio cholerae RC385]
 gi|297540676|gb|EFH76733.1| protease HslVU [Vibrio cholerae MAK 757]
          Length = 185

 Score =  179 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 102/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG+YA +AA AL+ +T+  A  IA KA++IA DICV+TNH+  +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELEI 174


>gi|257095383|ref|YP_003169024.1| ATP-dependent protease peptidase subunit [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047907|gb|ACV37095.1| 20S proteasome A and B subunits [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 179

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 139/176 (78%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  V+KA+ARKVRR+ +G I+AGFAG +ADAFTL
Sbjct: 3   QYHGTTILSVRRGSRVAMGGDGQVTLGNLVIKASARKVRRIHQGRILAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KL+++   LLRS+VELAKDWR D+ LR LEAM+ +AD+  +L+ITG GDV+EPE
Sbjct: 63  FERFEAKLDKHQGNLLRSAVELAKDWRSDRALRRLEAMLAVADRDNSLIITGNGDVVEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +G++AIGSGG++A SAARAL+ +++    E+ RK++ IA+++C+YTN N  +E L+
Sbjct: 123 HGIVAIGSGGAFAQSAARALVENSELDPAEVVRKSLQIASELCIYTNQNFTIEVLE 178


>gi|163745125|ref|ZP_02152485.1| ATP-dependent protease peptidase subunit [Oceanibulbus indolifex
           HEL-45]
 gi|161381943|gb|EDQ06352.1| ATP-dependent protease peptidase subunit [Oceanibulbus indolifex
           HEL-45]
          Length = 186

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 118/186 (63%), Positives = 140/186 (75%), Gaps = 2/186 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M         H TTI+ V+K G VVIAGDGQVSLGQTV+K  ARKVR+L  G  +++AGF
Sbjct: 1   MAQNDDFPGWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRKLSPGGYDVVAGF 60

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D    LVI
Sbjct: 61  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGKDLLVI 120

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG+YAL+AARA+M +   AE IAR AM+IAADICVYTN  + 
Sbjct: 121 TGAGDVLEPEHEVAAIGSGGNYALAAARAMMDSDRDAETIARDAMAIAADICVYTNGKLT 180

Query: 182 LETLKV 187
           +E +  
Sbjct: 181 VEKITA 186


>gi|259906820|ref|YP_002647176.1| ATP-dependent protease peptidase subunit [Erwinia pyrifoliae
           Ep1/96]
 gi|224962442|emb|CAX53897.1| ATP-dependent protease HslV [Erwinia pyrifoliae Ep1/96]
 gi|283476607|emb|CAY72435.1| ATP-dependent protease HslV [Erwinia pyrifoliae DSM 12163]
 gi|310766032|gb|ADP10982.1| ATP-dependent protease peptidase subunit [Erwinia sp. Ejp617]
          Length = 176

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 98/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T   A +I  KA+ IA DIC+YTNH++ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDIGARDIVEKALGIAGDICIYTNHHLTIEEL 172


>gi|241206992|ref|YP_002978088.1| ATP-dependent protease peptidase subunit [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240860882|gb|ACS58549.1| 20S proteasome A and B subunits [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 175

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 134/173 (77%), Positives = 155/173 (89%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++AL+AA ALM T  SAEEIAR+A+ IAADICVYTNHN+V+E+L   
Sbjct: 122 AIGSGGNFALAAALALMDTDKSAEEIARRALDIAADICVYTNHNVVVESLDAE 174


>gi|120600431|ref|YP_965005.1| ATP-dependent protease peptidase subunit [Shewanella sp. W3-18-1]
 gi|120560524|gb|ABM26451.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Shewanella sp. W3-18-1]
          Length = 216

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 130/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NA+KVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 44  TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 103

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   LLRS+VELAKDWR D+ LR LEAM+++AD   +L+ITG GDV++PE  ++
Sbjct: 104 EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEYDLV 163

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG+Y   +A   L +T+ SA EIA K+++IA DICV+TN    +E L
Sbjct: 164 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 214


>gi|224826712|ref|ZP_03699812.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
 gi|224600932|gb|EEG07115.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
          Length = 178

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 103/176 (58%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI++VR+   V + GDGQV+LG  V+KA ARKVRRL    ++AGFAG +ADAFTL
Sbjct: 3   QFDGTTIVSVRRGQRVALGGDGQVTLGNIVIKATARKVRRLYHDKVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+RS+VELAKDWR D+ LR LEAM+++ADK  TL+ITG GDVLEPE
Sbjct: 63  FERFEAKLEKHQGHLVRSAVELAKDWRTDRMLRRLEAMLIVADKESTLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA SAARAL  +T+     + +K++ IA DIC+YTNHN ++ETL 
Sbjct: 123 QGIAAIGSGGAYAQSAARALFENTELDPAVVVKKSLEIAGDICIYTNHNHLIETLD 178


>gi|152972727|ref|YP_001337873.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206579620|ref|YP_002241199.1| ATP-dependent protease HslV [Klebsiella pneumoniae 342]
 gi|238892335|ref|YP_002917069.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
           NTUH-K2044]
 gi|288937835|ref|YP_003441894.1| 20S proteasome A and subunit betas [Klebsiella variicola At-22]
 gi|290513061|ref|ZP_06552424.1| ATP-dependent protease hslV [Klebsiella sp. 1_1_55]
 gi|166222982|sp|A6TGC2|HSLV_KLEP7 RecName: Full=ATP-dependent protease subunit HslV
 gi|238065880|sp|B5XZ36|HSLV_KLEP3 RecName: Full=ATP-dependent protease subunit HslV
 gi|150957576|gb|ABR79606.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206568678|gb|ACI10454.1| ATP-dependent protease HslV [Klebsiella pneumoniae 342]
 gi|238544651|dbj|BAH61002.1| ATP-dependent protease peptidase subunit [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|288892544|gb|ADC60862.1| 20S proteasome A and B subunits [Klebsiella variicola At-22]
 gi|289774443|gb|EFD82448.1| ATP-dependent protease hslV [Klebsiella sp. 1_1_55]
          Length = 176

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 100/171 (58%), Positives = 132/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T   A +IA KA+ IA DIC+YTNH   +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTDMGARDIAEKALDIAGDICIYTNHFHTIEEL 172


>gi|126724541|ref|ZP_01740384.1| ATP-dependent protease peptidase subunit [Rhodobacterales bacterium
           HTCC2150]
 gi|126705705|gb|EBA04795.1| ATP-dependent protease peptidase subunit [Rhodobacterales bacterium
           HTCC2150]
          Length = 189

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 117/185 (63%), Positives = 146/185 (78%), Gaps = 4/185 (2%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGF 61
           M D+      H TTI+ V+KDG VVIAGDGQVSLG TV+K  ARKVRRL  G   ++AGF
Sbjct: 6   MADEF--PGWHGTTIIGVKKDGHVVIAGDGQVSLGPTVIKGTARKVRRLKTGKSDVVAGF 63

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R++VELAKDWR DKYL+ LEAM+++ D    L+I
Sbjct: 64  AGSTADAFTLLERLEAKLEATPGQLARAAVELAKDWRTDKYLQKLEAMLIVTDGKELLII 123

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR +M ++ SAE++AR+AM+IAADICVYTN  + 
Sbjct: 124 TGAGDVLEPEHNVAAIGSGGNFALAAARGMMESELSAEDVARRAMAIAADICVYTNGKLT 183

Query: 182 LETLK 186
           +E++K
Sbjct: 184 VESIK 188


>gi|16762343|ref|NP_457960.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|16767358|ref|NP_462973.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29143831|ref|NP_807173.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56415936|ref|YP_153011.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62182551|ref|YP_218968.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161617228|ref|YP_001591193.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167551411|ref|ZP_02345166.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167991668|ref|ZP_02572767.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168233037|ref|ZP_02658095.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168237719|ref|ZP_02662777.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168244149|ref|ZP_02669081.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263002|ref|ZP_02684975.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168467438|ref|ZP_02701275.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168821554|ref|ZP_02833554.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194446683|ref|YP_002043355.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194448660|ref|YP_002048095.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194468779|ref|ZP_03074763.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194737361|ref|YP_002117013.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197248081|ref|YP_002149020.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197264283|ref|ZP_03164357.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197364863|ref|YP_002144500.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|198242693|ref|YP_002218018.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200387634|ref|ZP_03214246.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204930332|ref|ZP_03221309.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|207859279|ref|YP_002245930.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213022301|ref|ZP_03336748.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
 gi|213161767|ref|ZP_03347477.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213416545|ref|ZP_03349689.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213426206|ref|ZP_03358956.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213615558|ref|ZP_03371384.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213648008|ref|ZP_03378061.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|224585903|ref|YP_002639702.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|238912238|ref|ZP_04656075.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289828421|ref|ZP_06546303.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|291084784|ref|ZP_06542259.2| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
 gi|61226073|sp|P0A271|HSLV_SALTY RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|61226074|sp|P0A272|HSLV_SALTI RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|75479325|sp|Q57HC5|HSLV_SALCH RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|81599678|sp|Q5PK45|HSLV_SALPA RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|189036236|sp|A9MZI2|HSLV_SALPB RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238065934|sp|B5F0S3|HSLV_SALA4 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238065935|sp|B5FPU1|HSLV_SALDC RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238065936|sp|B5QXM1|HSLV_SALEP RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238065938|sp|B4TCM9|HSLV_SALHS RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238065939|sp|B4T0T9|HSLV_SALNS RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238065940|sp|B4TPV3|HSLV_SALSV RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|238690773|sp|B5BJK9|HSLV_SALPK RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|254802422|sp|C0Q442|HSLV_SALPC RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|25513410|pir||AI0938 heat shock protein [imported] - Salmonella enterica subsp. enterica
           serovar Typhi (strain CT18)
 gi|9650895|emb|CAC00719.1| heat shock protein [Salmonella typhimurium]
 gi|16422659|gb|AAL22932.1| peptidase component of the HslUV protease [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16504647|emb|CAD09531.1| heat shock protein [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29139467|gb|AAO71033.1| heat shock protein [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|56130193|gb|AAV79699.1| heat shock protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|62130184|gb|AAX67887.1| peptidase component of the HslUV protease [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161366592|gb|ABX70360.1| hypothetical protein SPAB_05069 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405346|gb|ACF65568.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406964|gb|ACF67183.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194455143|gb|EDX43982.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194712863|gb|ACF92084.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195630183|gb|EDX48823.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197096340|emb|CAR61944.1| heat shock protein [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197211784|gb|ACH49181.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242538|gb|EDY25158.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197289401|gb|EDY28766.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197937209|gb|ACH74542.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604732|gb|EDZ03277.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204320736|gb|EDZ05938.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323731|gb|EDZ11570.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205329973|gb|EDZ16737.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205332762|gb|EDZ19526.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205336922|gb|EDZ23686.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205341786|gb|EDZ28550.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205348259|gb|EDZ34890.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206711082|emb|CAR35456.1| heat shock protein [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|224470431|gb|ACN48261.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|261249208|emb|CBG27070.1| heat shock protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267996392|gb|ACY91277.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301160599|emb|CBW20130.1| heat shock protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312915208|dbj|BAJ39182.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320088503|emb|CBY98262.1| heat shock protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321225384|gb|EFX50442.1| ATP-dependent protease HslV [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613145|gb|EFY10089.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619227|gb|EFY16110.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322626094|gb|EFY22906.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322626446|gb|EFY23252.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322632440|gb|EFY29188.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322635078|gb|EFY31799.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322642720|gb|EFY39310.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646454|gb|EFY42965.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650758|gb|EFY47159.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322652942|gb|EFY49279.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322657256|gb|EFY53536.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322662256|gb|EFY58471.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322666789|gb|EFY62965.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672061|gb|EFY68176.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322675782|gb|EFY71854.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322681801|gb|EFY77827.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322684003|gb|EFY80012.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322717049|gb|EFZ08620.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323132438|gb|ADX19868.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323193275|gb|EFZ78490.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197632|gb|EFZ82765.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323200793|gb|EFZ85864.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323207201|gb|EFZ92153.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211404|gb|EFZ96245.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323218551|gb|EGA03259.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323220967|gb|EGA05399.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323225944|gb|EGA10163.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323231623|gb|EGA15735.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323236129|gb|EGA20207.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323239450|gb|EGA23499.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243957|gb|EGA27968.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323249319|gb|EGA33236.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323250438|gb|EGA34321.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258892|gb|EGA42544.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260136|gb|EGA43759.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265255|gb|EGA48752.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270477|gb|EGA53923.1| ATP-dependent protease subunit HslV [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326625810|gb|EGE32155.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|332990921|gb|AEF09904.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 176

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L   
Sbjct: 122 AIGSGGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEELTAK 175


>gi|293391044|ref|ZP_06635378.1| ATP-dependent protease peptidase subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951578|gb|EFE01697.1| ATP-dependent protease peptidase subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 175

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T  SA EI  K++ IA +ICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGEICVFTNTNFTIEEL 173


>gi|91226629|ref|ZP_01261353.1| ATP-dependent protease peptidase subunit [Vibrio alginolyticus
           12G01]
 gi|91189103|gb|EAS75385.1| ATP-dependent protease peptidase subunit [Vibrio alginolyticus
           12G01]
          Length = 183

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 103/176 (58%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           AIGSGG+YA +AA AL+ +T   A EIA KA++IA DICV+TNH+  +E L    E
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELDSTAE 177


>gi|330813380|ref|YP_004357619.1| ATP-dependent protease HslV [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486475|gb|AEA80880.1| ATP-dependent protease HslV [Candidatus Pelagibacter sp. IMCC9063]
          Length = 179

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 117/175 (66%), Positives = 145/175 (82%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             H TTI  VRKDG VVIAGDGQVS+G TVMK+ A+KVR++ K NIIAGFAGS+ADAFTL
Sbjct: 5   SWHGTTIALVRKDGDVVIAGDGQVSIGNTVMKSTAKKVRKIEKRNIIAGFAGSTADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLE++  QL R++VELAKDWR DKYLR LEA++L+ADK  + VITG GDVLEPE
Sbjct: 65  FERLESKLEKHGGQLTRAAVELAKDWRSDKYLRRLEALMLVADKDKSFVITGQGDVLEPE 124

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            GV+AIGSGG+YAL+AARA++     +AEEIA++++ IA+DICV+TN+NI +E L
Sbjct: 125 YGVVAIGSGGNYALAAARAMIDDKTKTAEEIAKRSIEIASDICVFTNNNITIEKL 179


>gi|297180839|gb|ADI17044.1| ATP-dependent protease hslVU (clpYQ), peptidase subunit [uncultured
           alpha proteobacterium HF0010_30A23]
          Length = 334

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 117/189 (61%), Positives = 149/189 (78%), Gaps = 8/189 (4%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGF 61
           +M D++    MH TTIL+VRK   VV+AGDGQVSLG TVMK +A KVRRLGK  ++I GF
Sbjct: 143 LMSDENV---MHGTTILSVRKGNEVVVAGDGQVSLGPTVMKGSAIKVRRLGKRNDVIGGF 199

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AG++ADAFTL ERLE KLE YP QL+R++VELAKDWR D+YLR LEAM+++ D   +L++
Sbjct: 200 AGATADAFTLFERLEAKLETYPGQLVRAAVELAKDWRQDRYLRRLEAMLIVVDAEHSLIV 259

Query: 122 TGMGDVLE-PENGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTN 177
           TG GDV+E   +GV+AIGSGG+YALSAARAL+       +AE+IAR+AM +A DICVYTN
Sbjct: 260 TGTGDVVEAEADGVLAIGSGGNYALSAARALITVEDDSLTAEDIARRAMKVAGDICVYTN 319

Query: 178 HNIVLETLK 186
           H++ LE L+
Sbjct: 320 HSVRLEKLE 328


>gi|153803695|ref|ZP_01958281.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-3]
 gi|124120772|gb|EAY39515.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-3]
          Length = 185

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 102/173 (58%), Positives = 136/173 (78%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE  ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEQDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG+YA +AA AL+ +T+  A  IA KA++IA DICV+TNH+  +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARTIAEKALNIAGDICVFTNHHHTIEELEI 174


>gi|290968893|ref|ZP_06560430.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
           genomosp. type_1 str. 28L]
 gi|290781189|gb|EFD93780.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
           genomosp. type_1 str. 28L]
          Length = 187

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 106/186 (56%), Positives = 142/186 (76%), Gaps = 2/186 (1%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAG 63
            +++ A   HATTI+ V+++G   IAGDGQV+LG   +MKA ARKVRRL  G II+GFAG
Sbjct: 1   MNEYMATDFHATTIVAVQRNGQTAIAGDGQVTLGNAVIMKATARKVRRLYNGKIISGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           S ADAF L +R E KL ++   L+RS+VELAKDWR DK L  LEA++L+AD    L+I+G
Sbjct: 61  SVADAFALFDRFEGKLNEHNGNLVRSAVELAKDWRSDKILHKLEALLLVADAERILLISG 120

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
            G+V+EP++G+ AIGSGG+YAL+A RAL+ +T  SA++IA KA+ IAADICVYTNHN+++
Sbjct: 121 NGEVIEPDDGLTAIGSGGNYALAAGRALLQNTDLSAQDIALKALHIAADICVYTNHNVIV 180

Query: 183 ETLKVG 188
           E +K  
Sbjct: 181 EEIKKE 186


>gi|85372870|ref|YP_456932.1| ATP-dependent protease peptidase subunit [Erythrobacter litoralis
           HTCC2594]
 gi|84785953|gb|ABC62135.1| ATP-dependent protease HslVU peptidase subunit [Erythrobacter
           litoralis HTCC2594]
          Length = 185

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 114/184 (61%), Positives = 151/184 (82%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M    + H   + H TTI+ V++   +V+AGDGQVS+G TVMK NA+KVRR+G+G ++AG
Sbjct: 1   MDTSLNAHGLTQWHGTTIIGVKRGDKIVVAGDGQVSMGNTVMKPNAKKVRRIGEGKVVAG 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAG++ADAFTL ERLE+KL+QY  QL+R++VELAKDWR DKYLRNLEA++++ADK   LV
Sbjct: 61  FAGATADAFTLFERLERKLDQYSGQLMRAAVELAKDWRTDKYLRNLEALMIVADKETLLV 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
           +TG GDVLEPE G+ AIGSGG+YAL+AARAL   ++ AE+IARKAM++AA+ICV+TN ++
Sbjct: 121 LTGNGDVLEPEGGIAAIGSGGNYALAAARALSDYEDDAEQIARKAMAVAAEICVFTNGSV 180

Query: 181 VLET 184
            LET
Sbjct: 181 TLET 184


>gi|329298185|ref|ZP_08255521.1| ATP-dependent protease subunit HslV [Plautia stali symbiont]
          Length = 176

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 100/171 (58%), Positives = 134/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAGS+ADAFTL E  
Sbjct: 2   TTIVSVRRNGRVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGSTADAFTLYELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+I+G GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENSSLIISGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+  A +I  KA++IA DIC+YTNHNI  E L
Sbjct: 122 AIGSGGPYAQAAARALLENTEMGAHDIVAKALNIAGDICIYTNHNINYEEL 172


>gi|262273449|ref|ZP_06051263.1| ATP-dependent protease HslV [Grimontia hollisae CIP 101886]
 gi|262222427|gb|EEY73738.1| ATP-dependent protease HslV [Grimontia hollisae CIP 101886]
          Length = 174

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 101/172 (58%), Positives = 137/172 (79%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRALRRLEALLAVADETASLIITGNGDVVQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG++A +AA AL+ +T+  A EIA K+++IA DICV+TN +  +E L 
Sbjct: 122 AIGSGGNFAQAAAIALLENTELDAREIAEKSLTIAGDICVFTNQHHTIEELD 173


>gi|319406536|emb|CBI80178.1| heat shock protein [Bartonella sp. 1-1C]
          Length = 193

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 127/183 (69%), Positives = 149/183 (81%), Gaps = 1/183 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSS 65
           +H    M+ TTI+TVRK   VV+AGDGQVSLGQT+MK+NARKVRRLG  G +IAGFAG++
Sbjct: 3   EHKPDIMYGTTIVTVRKGNKVVMAGDGQVSLGQTIMKSNARKVRRLGKSGAVIAGFAGAT 62

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLEQYP+QL+R+ VELAKDWR D+YLR LEAM+L+AD+  TL +TG+G
Sbjct: 63  ADAFTLLERLETKLEQYPDQLMRACVELAKDWRTDRYLRRLEAMMLVADQKTTLALTGLG 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEPE+GVMAIGSGG++ALSAAR LM     AE IA KAMSIAA ICVYTN N  +E L
Sbjct: 123 DVLEPEDGVMAIGSGGNFALSAARVLMDMDLDAETIASKAMSIAAKICVYTNDNFTIEAL 182

Query: 186 KVG 188
              
Sbjct: 183 DAE 185


>gi|76577992|gb|ABA47467.1| ATP-dependent protease hslV [Burkholderia pseudomallei 1710b]
 gi|121229859|gb|ABM52377.1| protease HslVU, subunit HslV [Burkholderia mallei SAVP1]
 gi|124292619|gb|ABN01888.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           mallei NCTC 10229]
 gi|126244154|gb|ABO07247.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           mallei NCTC 10247]
          Length = 214

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 39  QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 98

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 99  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 158

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA +AARAL  +T  S  EI  KA+ IA D+C+YTNHN ++ET++
Sbjct: 159 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 214


>gi|78484755|ref|YP_390680.1| ATP-dependent protease peptidase subunit [Thiomicrospira crunogena
           XCL-2]
 gi|123555943|sp|Q31IL7|HSLV_THICR RecName: Full=ATP-dependent protease subunit HslV
 gi|78363041|gb|ABB41006.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
           family T01B [Thiomicrospira crunogena XCL-2]
          Length = 183

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 104/178 (58%), Positives = 139/178 (78%), Gaps = 1/178 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TTIL  +++G +VI GDGQV+LG  VMK NARKVRRL  G I+AGFAG++ADAFTL 
Sbjct: 6   FHGTTILCAKRNGEMVIGGDGQVTLGHVVMKGNARKVRRLFNGKILAGFAGATADAFTLF 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E KL+ +  QL+R++VE+AKDWR D+ LR LEAM+L+AD    L+I+G GDV+EP +
Sbjct: 66  ERFEGKLQTHNGQLMRAAVEMAKDWRTDRALRKLEAMMLVADADNMLLISGTGDVIEPAH 125

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
             ++IGSGGSYA SAA+ALM +T  SA+++  KA++IAAD+C+YTNHN+ +E+L   D
Sbjct: 126 DFISIGSGGSYAHSAAQALMENTDLSAKDVVEKALNIAADLCIYTNHNLTIESLNKED 183


>gi|20807895|ref|NP_623066.1| ATP-dependent protease peptidase subunit [Thermoanaerobacter
           tengcongensis MB4]
 gi|24211781|sp|Q8R9Y2|HSLV_THETN RecName: Full=ATP-dependent protease subunit HslV
 gi|20516461|gb|AAM24670.1| Proteasome protease subunit [Thermoanaerobacter tengcongensis MB4]
          Length = 176

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 93/175 (53%), Positives = 125/175 (71%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              TTI+ VR+   V +AGDGQV+ G  T++K  A+K+RRL  G +I GFAGS ADA TL
Sbjct: 2   FRGTTIVAVRRGDRVSVAGDGQVTFGDSTILKHGAKKIRRLYNGEVIVGFAGSVADAMTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ++ E+KLEQY   L R++VELA++WR DK LR LEA+++ ADK  TL+I+G G+V+EP+
Sbjct: 62  SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAADKKDTLLISGTGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             V+ IGSGG+Y   +A     +T    EEIARKA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTDLDTEEIARKALEIASKICVYTNNNITVETL 176


>gi|192360997|ref|YP_001980929.1| ATP-dependent protease peptidase subunit [Cellvibrio japonicus
           Ueda107]
 gi|238065849|sp|B3PI66|HSLV_CELJU RecName: Full=ATP-dependent protease subunit HslV
 gi|190687162|gb|ACE84840.1| peptidase, T1 family superfamily [Cellvibrio japonicus Ueda107]
          Length = 174

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 108/172 (62%), Positives = 132/172 (76%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR+DG VVI GDGQVSLG TVMK NARKVRRL K  ++AGFAG +ADAFTL ER 
Sbjct: 2   TTILSVRRDGQVVIGGDGQVSLGNTVMKGNARKVRRLYKNQVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +  QL R++VELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PE+ ++
Sbjct: 62  EAKLESHNGQLTRAAVELAKDWRTDRSLRRLEALLAVADKEASLIITGNGDVIQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA +AARAL+ +TQ  A  I  K + IA DICVYTN N  +E L 
Sbjct: 122 AIGSGGMYAQAAARALLENTQLDARNIVEKGLKIAGDICVYTNQNHTIEVLD 173


>gi|56551142|ref|YP_161981.1| ATP-dependent protease peptidase subunit [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761497|ref|ZP_04759585.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753208|ref|YP_003226101.1| ATP-dependent protease peptidase subunit [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|81598340|sp|Q5NQY4|HSLV_ZYMMO RecName: Full=ATP-dependent protease subunit HslV
 gi|56542716|gb|AAV88870.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241374404|gb|EER63901.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258552571|gb|ACV75517.1| 20S proteasome A and B subunits [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 184

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 118/181 (65%), Positives = 149/181 (82%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               +  H TTIL+VR++G VVIAGDGQVS+G TVMK NARKVRRLG G++I GFAG++A
Sbjct: 2   SEDKIGWHGTTILSVRRNGRVVIAGDGQVSMGNTVMKPNARKVRRLGDGSVIGGFAGATA 61

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE KLE++  QLLR++VELAKDWR DKYLRNLEA++++AD  +TLV+TG GD
Sbjct: 62  DAFTLFERLEAKLERHNGQLLRAAVELAKDWRTDKYLRNLEALMIVADDQVTLVLTGNGD 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEP  G+ AIGSGG++ALSAARAL+  +  AE IARKA+++AADICV+TN  + +ETL+
Sbjct: 122 VLEPVGGIAAIGSGGNFALSAARALVDYEEDAEVIARKALAVAADICVFTNDQVTIETLE 181

Query: 187 V 187
            
Sbjct: 182 S 182


>gi|261866863|ref|YP_003254785.1| ATP-dependent protease peptidase subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412195|gb|ACX81566.1| ATP-dependent protease peptidase subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 175

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++PE + +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPETDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T  SA EI  K++ IA +ICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGEICVFTNTNFTIEEL 173


>gi|269964740|ref|ZP_06178978.1| ATP-dependent protease HslV [Vibrio alginolyticus 40B]
 gi|269830639|gb|EEZ84860.1| ATP-dependent protease HslV [Vibrio alginolyticus 40B]
          Length = 183

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 102/173 (58%), Positives = 135/173 (78%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG+YA +AA AL+ +T   A EIA KA++IA DICV+TNH+  +E L  
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELDS 174


>gi|87200648|ref|YP_497905.1| ATP-dependent protease peptidase subunit [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87136329|gb|ABD27071.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Novosphingobium aromaticivorans DSM 12444]
          Length = 185

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 112/179 (62%), Positives = 147/179 (82%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            H  ++ H TTI+ V+K+G  VIAGDGQVS+G TVMK NARKVRR+G G +IAGFAG++A
Sbjct: 7   SHGLIQWHGTTIIGVKKNGRTVIAGDGQVSMGNTVMKPNARKVRRIGDGKVIAGFAGATA 66

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE+KLEQ+  QL+R++VELAKDWR DKYLRNLEA++++AD    L++TG GD
Sbjct: 67  DAFTLFERLERKLEQHRGQLMRAAVELAKDWRTDKYLRNLEALMIVADADTMLILTGNGD 126

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE G+ AIGSGG+YAL+AA+AL   ++ AE+IAR+AM +AA++CV+TN  + LE +
Sbjct: 127 VLEPEGGIAAIGSGGNYALAAAKALGDYEDDAEKIARRAMQVAAEVCVFTNDRVTLEEI 185


>gi|116249815|ref|YP_765653.1| ATP-dependent protease peptidase subunit [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|189036232|sp|Q1MNB5|HSLV_RHIL3 RecName: Full=ATP-dependent protease subunit HslV
 gi|115254463|emb|CAK05537.1| ATP-dependent protease hslV (EC 3.4.25.-) (Heat shock protein hslV)
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 175

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 133/173 (76%), Positives = 154/173 (89%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG ++AGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVVAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++AL+AA ALM T  SAEEIAR+A+ IAADICVYTNHN+V+E L   
Sbjct: 122 AIGSGGNFALAAALALMDTDKSAEEIARRALDIAADICVYTNHNVVVELLDAE 174


>gi|290477228|ref|YP_003470145.1| peptidase component of the HslUV protease [Xenorhabdus bovienii
           SS-2004]
 gi|289176578|emb|CBJ83387.1| peptidase component of the HslUV protease [Xenorhabdus bovienii
           SS-2004]
          Length = 176

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATMGHTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGGSYA +AARA++  T+ SA EIA +A++IA DIC+YTNHN   E L
Sbjct: 122 AIGSGGSYAQAAARAMLETTELSAREIAERALTIAGDICIYTNHNHNFEEL 172


>gi|325577181|ref|ZP_08147665.1| ATP-dependent protease HslV [Haemophilus parainfluenzae ATCC 33392]
 gi|301155382|emb|CBW14848.1| peptidase component of the HslUV protease [Haemophilus
           parainfluenzae T3T1]
 gi|325160763|gb|EGC72884.1| ATP-dependent protease HslV [Haemophilus parainfluenzae ATCC 33392]
          Length = 176

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
           E+KLE +   LL+++VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++PE + +
Sbjct: 62  ERKLEMHQGHLLKAAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T  SA EI  K++ IA DICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGDICVFTNTNFTIEEL 173


>gi|260877942|ref|ZP_05890297.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|308090062|gb|EFO39757.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|328471828|gb|EGF42705.1| ATP-dependent protease subunit HslV [Vibrio parahaemolyticus 10329]
          Length = 183

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           AIGSGG+YA +AA AL+ +T   A EIA KA++IA DICV+TNH+  +E L    E
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELDSTAE 177


>gi|134096122|ref|YP_001101197.1| ATP-dependent protease peptidase subunit [Herminiimonas
           arsenicoxydans]
 gi|166222980|sp|A4G989|HSLV_HERAR RecName: Full=ATP-dependent protease subunit HslV
 gi|133740025|emb|CAL63076.1| ATP-dependent protease HslV [Herminiimonas arsenicoxydans]
          Length = 178

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 103/176 (58%), Positives = 135/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+  VV + GDGQV+LG  VMK  ARKVR++  G ++ GFAG +ADAFTL
Sbjct: 3   QFHGTTILSVRRGNVVALGGDGQVTLGNIVMKGTARKVRKVYSGKVLVGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LER E KLE++   L+R+SVELAKDWR D+ LR LEAM+L+AD   TLVITG GDVLEP 
Sbjct: 63  LERFESKLEKHQGHLMRASVELAKDWRTDRMLRRLEAMLLVADHETTLVITGNGDVLEPN 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +G+ AIGSGG+YA SAA+AL  +T+ S  EI +K+++IA ++C+YTN +  +ETL 
Sbjct: 123 DGIGAIGSGGTYAQSAAKALQENTELSPLEIVKKSLTIAGELCIYTNLSHTIETLD 178


>gi|147677584|ref|YP_001211799.1| ATP-dependent protease peptidase subunit [Pelotomaculum
           thermopropionicum SI]
 gi|189028455|sp|A5D2W7|HSLV_PELTS RecName: Full=ATP-dependent protease subunit HslV
 gi|146273681|dbj|BAF59430.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Pelotomaculum thermopropionicum SI]
          Length = 176

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 98/175 (56%), Positives = 132/175 (75%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ VRK G V +AGDGQV+ G  T++K  ARK+RRL K +++AGFAGS ADA TL
Sbjct: 2   FHATTIVAVRKGGKVAVAGDGQVTFGQNTIIKKGARKIRRLYKDSVLAGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L R++VELAKDWR D+ LR LEA++++ADK   L+I+G G+V+EP+
Sbjct: 62  FEKFEGKLEEYHGNLQRAAVELAKDWRTDRILRRLEALLIVADKENLLIISGSGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +GV AIGSGG Y   +A   +  T   AE+IAR+A+++AA+ICVYTN NI++E L
Sbjct: 122 DGVAAIGSGGPYALAAARALVRHTSMEAEDIAREALAVAAEICVYTNDNIIVERL 176


>gi|134284129|ref|ZP_01770823.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia pseudomallei 305]
 gi|134244581|gb|EBA44685.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia pseudomallei 305]
          Length = 211

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 36  QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 95

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 96  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 155

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA +AARAL  +T  S  EI  KA+ IA D+C+YTNHN ++ET++
Sbjct: 156 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 211


>gi|320539525|ref|ZP_08039192.1| peptidase component of the HslUV protease [Serratia symbiotica str.
           Tucson]
 gi|320030378|gb|EFW12390.1| peptidase component of the HslUV protease [Serratia symbiotica str.
           Tucson]
          Length = 199

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 98/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 25  TTIVSVRRHGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 84

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 85  EQKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADEHASLIITGNGDVIQPENDLI 144

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+ +A EI  K++ IA DIC+YTNH   +E L
Sbjct: 145 AIGSGGPYAQAAARALLENTELNAREIVDKSLGIAGDICIYTNHFHTIEEL 195


>gi|296136674|ref|YP_003643916.1| 20S proteasome A and B subunits [Thiomonas intermedia K12]
 gi|294340808|emb|CAZ89203.1| ATP-dependent protease hslV (Heat shock protein hslV) [Thiomonas
           sp. 3As]
 gi|295796796|gb|ADG31586.1| 20S proteasome A and B subunits [Thiomonas intermedia K12]
          Length = 179

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 105/175 (60%), Positives = 132/175 (75%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  V+K+ ARKVRRL    I+AGFAG +ADAFTL
Sbjct: 3   QYHGTTILSVRRGATVALGGDGQVTLGNIVVKSTARKVRRLYNNQILAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++  QLLRS+VELAKDWR D+ LR LEAM+ +AD   +L+ITG GDVLEPE
Sbjct: 63  FERFEAKLEKHQGQLLRSAVELAKDWRTDRMLRRLEAMLSVADAEHSLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            G++AIGSGG+YA SAARAL+  T  S  EI  +++ IA DIC+YTN +  +ETL
Sbjct: 123 YGIVAIGSGGAYAQSAARALLEHTALSPREIVAQSLKIAGDICIYTNQSHTIETL 177


>gi|315633392|ref|ZP_07888683.1| ATP-dependent protease HslV [Aggregatibacter segnis ATCC 33393]
 gi|315477892|gb|EFU68633.1| ATP-dependent protease HslV [Aggregatibacter segnis ATCC 33393]
          Length = 175

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T+ SA EI  K++ IA +ICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGEICVFTNTNFTIEEL 173


>gi|284159403|ref|YP_440723.3| ATP-dependent protease peptidase subunit [Burkholderia
           thailandensis E264]
 gi|83654306|gb|ABC38369.1| protease HslVU, subunit HslV [Burkholderia thailandensis E264]
          Length = 214

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 39  QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 98

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 99  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 158

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA +AARAL  +T  S  EI  K+++IA D+C+YTNHN ++ET++
Sbjct: 159 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKSLAIAGDMCIYTNHNRIIETIE 214


>gi|300714744|ref|YP_003739547.1| ATP-dependent protease HslV [Erwinia billingiae Eb661]
 gi|299060580|emb|CAX57687.1| ATP-dependent protease HslV [Erwinia billingiae Eb661]
          Length = 176

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 99/171 (57%), Positives = 133/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+  A +I  KA+ IA DIC+YTNHN+ +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTEIGARDIVEKALGIAGDICIYTNHNLTIEAL 172


>gi|293602499|ref|ZP_06684945.1| ATP-dependent protease HslV [Achromobacter piechaudii ATCC 43553]
 gi|292819261|gb|EFF78296.1| ATP-dependent protease HslV [Achromobacter piechaudii ATCC 43553]
          Length = 179

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 95/175 (54%), Positives = 130/175 (74%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + HATTI+ VR+   V + GDGQV+LG  V+K  ARK+RRL    I+AGFAG++ADAFTL
Sbjct: 3   QFHATTIVCVRRGNRVALGGDGQVTLGNIVVKGTARKIRRLYHDKILAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+R++VEL +DWR D+ LR LEAM+++AD   TLV+TG GDVLEPE
Sbjct: 63  QERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADTEHTLVLTGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG+Y   +A   L +T+ S E + ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELSPEAVVKQSLEIAGDLCIYTNQNHVIETL 177


>gi|28897024|ref|NP_796629.1| ATP-dependent protease peptidase subunit [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153840681|ref|ZP_01993348.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
 gi|260362283|ref|ZP_05775250.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
           parahaemolyticus K5030]
 gi|260897598|ref|ZP_05906094.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|260899528|ref|ZP_05907923.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|31340156|sp|Q87T20|HSLV_VIBPA RecName: Full=ATP-dependent protease subunit HslV
 gi|28805232|dbj|BAC58513.1| protease HslVU, subunit HslV [Vibrio parahaemolyticus RIMD 2210633]
 gi|149745630|gb|EDM56788.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
 gi|308087505|gb|EFO37200.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|308108817|gb|EFO46357.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|308111328|gb|EFO48868.1| ATP-dependent protease HslVU, peptidase subunit [Vibrio
           parahaemolyticus K5030]
          Length = 183

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           AIGSGG+YA +AA AL+ +T   A EIA KA++IA DICV+TNH+  +E L    E
Sbjct: 122 AIGSGGAYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELDSTTE 177


>gi|269140777|ref|YP_003297478.1| ATP-dependent protease peptidase subunit [Edwardsiella tarda
           EIB202]
 gi|294638264|ref|ZP_06716517.1| ATP-dependent protease HslVU, peptidase subunit [Edwardsiella tarda
           ATCC 23685]
 gi|267986438|gb|ACY86267.1| ATP-dependent protease peptidase subunit [Edwardsiella tarda
           EIB202]
 gi|291088517|gb|EFE21078.1| ATP-dependent protease HslVU, peptidase subunit [Edwardsiella tarda
           ATCC 23685]
          Length = 176

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 98/174 (56%), Positives = 130/174 (74%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGKVVIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T+  A +I  KA+ IA DIC+YTN    +E L   
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKALGIAGDICIYTNQFHTIEELDSK 175


>gi|251793770|ref|YP_003008500.1| ATP-dependent protease peptidase subunit [Aggregatibacter
           aphrophilus NJ8700]
 gi|247535167|gb|ACS98413.1| ATP-dependent protease HslV [Aggregatibacter aphrophilus NJ8700]
          Length = 174

 Score =  177 bits (450), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGKVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T+ SA EI  K++ IA +ICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGEICVFTNTNFTIEEL 173


>gi|145632761|ref|ZP_01788495.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           3655]
 gi|145634508|ref|ZP_01790217.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittAA]
 gi|319897988|ref|YP_004136185.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           F3031]
 gi|144986956|gb|EDJ93508.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           3655]
 gi|145268053|gb|EDK08048.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittAA]
 gi|317433494|emb|CBY81877.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           F3031]
          Length = 175

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T+ SA EI  K++ IA DICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGDICVFTNTNFTIEEL 173


>gi|187476658|ref|YP_784681.1| ATP-dependent protease peptidase subunit [Bordetella avium 197N]
 gi|123515064|sp|Q2L1C6|HSLV_BORA1 RecName: Full=ATP-dependent protease subunit HslV
 gi|115421244|emb|CAJ47749.1| ATP-dependent protease heat shock protein [Bordetella avium 197N]
          Length = 179

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 94/175 (53%), Positives = 129/175 (73%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + HATTI+ VR+   V + GDGQV+LG  V+K  ARK+RRL    ++AGFAG++ADAFTL
Sbjct: 3   QFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKVLAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+R++VEL +DWR D+ LR LEAM+++AD   TLV+TG GDVLEPE
Sbjct: 63  QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG+Y   +A   L +T+   E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELPPETIVKQSLEIAGDLCIYTNQNHVIETL 177


>gi|254477320|ref|ZP_05090706.1| ATP-dependent protease HslV [Ruegeria sp. R11]
 gi|214031563|gb|EEB72398.1| ATP-dependent protease HslV [Ruegeria sp. R11]
          Length = 187

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 115/188 (61%), Positives = 141/188 (75%), Gaps = 3/188 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M D  +    H TTI+ V+K   VVIAGDGQVSLGQTV+K  ARKVRRL  G  +++ GF
Sbjct: 1   MADDQFP-GWHGTTIIGVKKGDEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVVGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D +   VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGSDMFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR +M +   AE +AR AM+IAADICVYTN  + 
Sbjct: 120 TGAGDVLEPEHNVAAIGSGGNFALAAARGMMDSDRDAETVARDAMAIAADICVYTNGRLT 179

Query: 182 LETLKVGD 189
           +E++   D
Sbjct: 180 VESISRKD 187


>gi|239618026|ref|YP_002941348.1| 20S proteasome A and B subunits [Kosmotoga olearia TBF 19.5.1]
 gi|239506857|gb|ACR80344.1| 20S proteasome A and B subunits [Kosmotoga olearia TBF 19.5.1]
          Length = 181

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 97/178 (54%), Positives = 133/178 (74%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +MH TTIL VR++G  VIAGDGQ++LG TVMK +ARKVR+LG G ++AGFAGS ADA TL
Sbjct: 3   QMHGTTILAVRRNGKTVIAGDGQITLGATVMKGSARKVRKLGDGKVLAGFAGSVADALTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+K  +  + LLR++V LAK+WR +K LRNLEA++L+AD    L+I+G G+V++P+
Sbjct: 63  FEKFEEKYRESNSSLLRAAVNLAKEWRTNKILRNLEALLLVADTDNILLISGNGEVIQPD 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             V+AIGSGG Y   +A   L +T   AE IA++AM IA++IC+YTN N  +E L+V 
Sbjct: 123 ENVIAIGSGGPYALAAAQALLRNTDMDAEGIAKQAMKIASEICIYTNSNFTVEALEVK 180


>gi|148514134|gb|ABQ80994.1| 20S proteasome, A and B subunits [Pseudomonas putida F1]
 gi|166862527|gb|ABZ00935.1| 20S proteasome A and B subunits [Pseudomonas putida GB-1]
          Length = 192

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 18  TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 77

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 78  EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137

Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG+YA +AARAL++ T  SA EIA  A++IA DICV+TNHN+ +E   + D
Sbjct: 138 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 192


>gi|319775581|ref|YP_004138069.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           F3047]
 gi|317450172|emb|CBY86386.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           F3047]
          Length = 175

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL  +T+ SA EI  K++ IA DICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALAENTELSAREIVEKSLKIAGDICVFTNTNFTIEEL 173


>gi|77165803|ref|YP_344328.1| ATP-dependent protease peptidase subunit [Nitrosococcus oceani ATCC
           19707]
 gi|254433381|ref|ZP_05046889.1| peptidase, T1 family [Nitrosococcus oceani AFC27]
 gi|123593709|sp|Q3J8P8|HSLV_NITOC RecName: Full=ATP-dependent protease subunit HslV
 gi|76884117|gb|ABA58798.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Nitrosococcus oceani ATCC 19707]
 gi|207089714|gb|EDZ66985.1| peptidase, T1 family [Nitrosococcus oceani AFC27]
          Length = 179

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 103/174 (59%), Positives = 129/174 (74%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL+VR+   VVI GDGQVS+   VMK NARKVRRL    +IAGFAG +ADAFTL 
Sbjct: 4   FRGTTILSVRRQEQVVIGGDGQVSMNNIVMKGNARKVRRLFHNQVIAGFAGGTADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E KLE++   L R++VELAKDWR D+ LR LEA++ +AD   + VI+G GDV+EPE 
Sbjct: 64  ERFEAKLEKHQGNLTRAAVELAKDWRSDRSLRRLEALLAVADHKASYVISGNGDVIEPEY 123

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           G++AIGSGG YA +AARAL+ +T  SA  I  KA+SIAADIC+YTN ++ +E L
Sbjct: 124 GLIAIGSGGPYAQAAARALLENTDFSARVIVEKALSIAADICIYTNTHLTVEEL 177


>gi|330827799|ref|YP_004390751.1| ATP-dependent protease subunit HslV [Aeromonas veronii B565]
 gi|328802935|gb|AEB48134.1| ATP-dependent protease subunit HslV [Aeromonas veronii B565]
          Length = 177

 Score =  177 bits (449), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 98/172 (56%), Positives = 130/172 (75%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQVSLG TVMK NARKV RL  G ++AGFAG +ADAFTLLER 
Sbjct: 2   TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L R++V LAKDWR D+ LR LEA++ +AD+  + +ITG GDV++PE+ ++
Sbjct: 62  EAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEHKSFIITGNGDVVQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG++A SAA AL+ +T+  A  I  K++ IA DICV+TN N  +E L 
Sbjct: 122 AIGSGGNFAQSAAIALLENTELDARTIVEKSLKIAGDICVFTNGNHTIEVLD 173


>gi|88799637|ref|ZP_01115213.1| ATP-dependent protease peptidase subunit [Reinekea sp. MED297]
 gi|88777722|gb|EAR08921.1| ATP-dependent protease peptidase subunit [Reinekea sp. MED297]
          Length = 172

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 107/171 (62%), Positives = 137/171 (80%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VR+D  VV+AGDGQVSLG TVMK NARKVRRL    +IAGFAG +ADAFTL E+ 
Sbjct: 2   TTIVAVRRDDQVVVAGDGQVSLGNTVMKGNARKVRRLYHNKVIAGFAGGTADAFTLFEKF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E  L+Q+   L R++VELAK+WR D+ LR LEAM+++AD   +L+I+G GDV+EPE+GV+
Sbjct: 62  ESHLQQHSGHLTRAAVELAKEWRSDRALRRLEAMLIVADAEASLLISGTGDVVEPEHGVV 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG+YAL+AARAL  +T+  A+ IA K++ +AADICVYTNHN V+E L
Sbjct: 122 AIGSGGNYALAAARALFDNTELDAKTIAEKSLDLAADICVYTNHNTVIEAL 172


>gi|300309524|ref|YP_003773616.1| ATP-dependent protease HslVU peptidase subunit [Herbaspirillum
           seropedicae SmR1]
 gi|300072309|gb|ADJ61708.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit heat shock
           protein [Herbaspirillum seropedicae SmR1]
          Length = 178

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 105/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  VMK +ARKVR+L  G ++ GFAG +ADAFTL
Sbjct: 3   QFHGTTILSVRRGNQVALGGDGQVTLGNIVMKGSARKVRKLYHGKVLVGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LE  E KLE++   L+R+SVELAKDWR D+ LR LEAM+L ADK  TLVITG GDVLEP 
Sbjct: 63  LELFEAKLEKHQGNLMRASVELAKDWRTDRMLRRLEAMLLCADKETTLVITGNGDVLEPN 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +G+ AIGSGGSYA SAA+AL  +T+ S  EI +K+++IA ++C+YTN N ++ETL+
Sbjct: 123 DGIGAIGSGGSYAQSAAKALYENTELSPAEIVKKSLTIAGELCIYTNLNHIIETLE 178


>gi|163732948|ref|ZP_02140392.1| ATP-dependent protease peptidase subunit [Roseobacter litoralis Och
           149]
 gi|161393483|gb|EDQ17808.1| ATP-dependent protease peptidase subunit [Roseobacter litoralis Och
           149]
          Length = 185

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 119/184 (64%), Positives = 145/184 (78%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M    +    H TTI+ V+KDG VVIAGDGQVSLGQTV+K  ARKVRRL  G  +++AGF
Sbjct: 1   MARNEFP-GWHGTTIIGVKKDGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM++++D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDIFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG+YAL+AAR +M ++ +AEE+AR AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNYALAAARGMMDSKRTAEEVARDAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VEKI 183


>gi|33594013|ref|NP_881657.1| ATP-dependent protease peptidase subunit [Bordetella pertussis
           Tohama I]
 gi|47605654|sp|Q7VUK0|HSLV_BORPE RecName: Full=ATP-dependent protease subunit HslV
 gi|33564087|emb|CAE43355.1| ATP-dependent protease heat shock protein [Bordetella pertussis
           Tohama I]
 gi|332383430|gb|AEE68277.1| ATP-dependent protease peptidase subunit [Bordetella pertussis CS]
          Length = 179

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 93/177 (52%), Positives = 128/177 (72%), Gaps = 1/177 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + HATTI+ VR+   V + GDGQV+LG  V+K   RK+RRL    ++AGFAG++ADAFTL
Sbjct: 3   QFHATTIVCVRRGNHVALGGDGQVTLGNIVIKGTVRKIRRLYHDKVLAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+R++VEL +DWR D+ LR LEAM+++AD   TLV+TG GDVLEPE
Sbjct: 63  QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADTEHTLVLTGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           +G+ AIGSGG+Y   +A   L +T+   E I ++++ IA D+C+YTN N V+ETL  
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELPPEAIVKQSLEIAGDLCIYTNQNHVIETLGA 179


>gi|311109412|ref|YP_003982265.1| ATP-dependent protease HslV [Achromobacter xylosoxidans A8]
 gi|310764101|gb|ADP19550.1| ATP-dependent protease HslV [Achromobacter xylosoxidans A8]
          Length = 179

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 95/175 (54%), Positives = 130/175 (74%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + HATTI+ VR+   V + GDGQV+LG  V+K  ARK+RRL    I+AGFAG++ADAFTL
Sbjct: 3   QFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+R++VEL +DWR D+ LR LEAM+++AD   TLV+TG GDVLEPE
Sbjct: 63  QERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG+Y   +A   L +T+ S E + ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELSPEAVVKQSLEIAGDLCIYTNQNHVIETL 177


>gi|222099124|ref|YP_002533692.1| ATP-dependent protease hslV [Thermotoga neapolitana DSM 4359]
 gi|221571514|gb|ACM22326.1| ATP-dependent protease hslV [Thermotoga neapolitana DSM 4359]
          Length = 179

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 94/175 (53%), Positives = 127/175 (72%), Gaps = 1/175 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +K H TTIL VR+DG  V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA T
Sbjct: 4   MKFHGTTILVVRRDGKTVMGGDGQVTFGSTVLKGNARKVRKLGEGRVLAGFAGSVADAMT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +R E KL ++   L +++VELAKDWR D+ LR LEA++L+AD+    +I+G G+V++P
Sbjct: 64  LFDRFEAKLREWGGNLTKAAVELAKDWRTDRILRRLEALLLVADRENIFIISGNGEVIQP 123

Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           ++   AIGSGG Y   +A   L +T  SA EI  KAM IA +IC+YTN N+V+E 
Sbjct: 124 DDDAAAIGSGGPYALAAAKALLRNTDLSAREIVEKAMMIAGEICIYTNQNLVIEE 178


>gi|225851284|ref|YP_002731518.1| ATP-dependent protease peptidase subunit [Persephonella marina
           EX-H1]
 gi|254802419|sp|C0QS72|HSLV_PERMH RecName: Full=ATP-dependent protease subunit HslV
 gi|225645262|gb|ACO03448.1| ATP-dependent protease HslVU, peptidase subunit [Persephonella
           marina EX-H1]
          Length = 177

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 104/175 (59%), Positives = 134/175 (76%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +  +TTI  VR+DG  VIAGDGQV+LG +VMKA+ARK+R+L +G I+ GFAGS+AD   L
Sbjct: 3   RTKSTTICIVRRDGKTVIAGDGQVTLGNSVMKASARKIRKLYEGKIVVGFAGSAADGLAL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +ERLE+KL +Y   LLR++VELAKDWR DK+LR LEA+++ ADK I L+I+G GDV+EP+
Sbjct: 63  MERLEEKLNKYRGNLLRAAVELAKDWRTDKFLRRLEAVMVAADKEIMLLISGNGDVIEPD 122

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             V+AIGSGG YA SAA AL   T  SA +I  +AM IA +IC+YTN NI +E L
Sbjct: 123 EPVLAIGSGGDYARSAALALYRNTDLSARQIVEEAMKIAGEICIYTNSNITIEEL 177


>gi|145297301|ref|YP_001140142.1| ATP-dependent protease peptidase subunit [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|166221621|sp|A4SHM2|HSLV_AERS4 RecName: Full=ATP-dependent protease subunit HslV
 gi|142850073|gb|ABO88394.1| ATp-dependent protease HslVU, peptidase subunit HslV [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 177

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 98/172 (56%), Positives = 130/172 (75%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQVSLG TVMK NARKV RL  G ++AGFAG +ADAFTLLER 
Sbjct: 2   TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L R++V LAKDWR D+ LR LEA++ +AD+  + +ITG GDV++PE  ++
Sbjct: 62  EAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEHKSFIITGNGDVVQPEQDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG++A SAA AL+ +T+  A+ I  K++ IA DICV+TN N  +E L 
Sbjct: 122 AIGSGGNFAQSAAIALLENTELDAKTIVEKSLKIAGDICVFTNGNHTIEVLD 173


>gi|260595966|ref|YP_003208537.1| ATP-dependent protease subunit HslV [Cronobacter turicensis z3032]
 gi|260215143|emb|CBA26939.1| ATP-dependent protease hslV [Cronobacter turicensis z3032]
          Length = 176

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 97/174 (55%), Positives = 132/174 (75%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T+  A +I  K++ IA DIC+YTNH + +E L   
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNHFLTIEELNSK 175


>gi|126738521|ref|ZP_01754226.1| ATP-dependent protease peptidase subunit [Roseobacter sp.
           SK209-2-6]
 gi|126720320|gb|EBA17026.1| ATP-dependent protease peptidase subunit [Roseobacter sp.
           SK209-2-6]
          Length = 187

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 118/184 (64%), Positives = 145/184 (78%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M D  +    H TTI+ V+K G VVIAGDGQVSLGQTV+K  ARKVRRL  G  +++ GF
Sbjct: 1   MADDQFP-GWHGTTIIGVKKGGQVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVVGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM++++D T  LVI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGTELLVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR +M +  +AE++AR AM+IAADICVYTN  + 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRNAEQVARDAMAIAADICVYTNGRLT 179

Query: 182 LETL 185
           +ET+
Sbjct: 180 VETI 183


>gi|319791657|ref|YP_004153297.1| 20S proteasome a and b subunits [Variovorax paradoxus EPS]
 gi|315594120|gb|ADU35186.1| 20S proteasome A and B subunits [Variovorax paradoxus EPS]
          Length = 181

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 104/179 (58%), Positives = 135/179 (75%), Gaps = 5/179 (2%)

Query: 12  KMHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           + H TTI++VR+       V I GDGQV+LG  V+K  ARKVRRL  G ++AGFAG++AD
Sbjct: 3   QFHGTTIVSVRRKTPQGDQVAIGGDGQVTLGNIVIKGTARKVRRLYHGKVLAGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ER E KLE++   L R++VEL KDWR D+ LR LEAM+ +AD T +L+ITG GDV
Sbjct: 63  AFTLFERFEAKLEKHQGHLTRAAVELTKDWRTDRVLRKLEAMLAVADATTSLIITGNGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           LEPE+GV+AIGSGG+YA SAA+AL+ +T  SAE+I RK++ IA +IC+YTN N  +E L
Sbjct: 123 LEPEDGVIAIGSGGAYAQSAAKALIENTDLSAEQIVRKSLGIAGEICIYTNMNHTVEAL 181


>gi|117618959|ref|YP_858538.1| ATP-dependent protease peptidase subunit [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|166221620|sp|A0KQI7|HSLV_AERHH RecName: Full=ATP-dependent protease subunit HslV
 gi|117560366|gb|ABK37314.1| ATP-dependent protease HslV [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 177

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 98/172 (56%), Positives = 131/172 (76%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQVSLG TVMK NARKV RL  G ++AGFAG +ADAFTLLER 
Sbjct: 2   TTIVSVRRNGQVVIGGDGQVSLGNTVMKGNARKVHRLYNGKVLAGFAGGTADAFTLLERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L R++V LAKDWR D+ LR LEA++ +AD+  + +ITG GDV++PE+ ++
Sbjct: 62  EAKLQAHQGNLERAAVALAKDWRTDRALRRLEALLAVADEHKSFIITGNGDVVQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG++A SAA AL+ +T+  A+ I  K++ IA DICV+TN N  +E L 
Sbjct: 122 AIGSGGNFAQSAAIALLENTELDAKSIVEKSLKIAGDICVFTNGNHTIEVLD 173


>gi|307546358|ref|YP_003898837.1| ATP-dependent protease peptidase subunit [Halomonas elongata DSM
           2581]
 gi|307218382|emb|CBV43652.1| ATP-dependent protease peptidase subunit [Halomonas elongata DSM
           2581]
          Length = 172

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 105/171 (61%), Positives = 138/171 (80%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   V +AGDGQVSLG TVMK NA KVRRL +G ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGDQVALAGDGQVSLGNTVMKGNASKVRRLYRGQVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE+Y   L++S+VELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV+EPE G++
Sbjct: 62  EAQLEKYQGNLVKSAVELAKDWRTDRALRRLEALLAVADKHASLIITGNGDVVEPERGII 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG+YAL++ARAL+ +T+ SA EI  K++ IA DICV+TNH++ LE L
Sbjct: 122 AIGSGGNYALASARALLENTELSAREITEKSLEIAGDICVFTNHHVTLEEL 172


>gi|323138812|ref|ZP_08073876.1| 20S proteasome, A and B subunits [Methylocystis sp. ATCC 49242]
 gi|322395960|gb|EFX98497.1| 20S proteasome, A and B subunits [Methylocystis sp. ATCC 49242]
          Length = 187

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 127/185 (68%), Positives = 153/185 (82%), Gaps = 4/185 (2%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +++    MHATTI+ V+K G  VIAGDGQVSLGQT+MK NARKVRRLGKG++IAGFAG+
Sbjct: 3   NEQNKTPGMHATTIILVKKQGQTVIAGDGQVSLGQTIMKGNARKVRRLGKGDVIAGFAGA 62

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KL+QYP QL+R+ VELAKDWRMD+YLR LEAM+L+AD+ + LV+TG 
Sbjct: 63  TADAFTLFERLESKLDQYPGQLMRACVELAKDWRMDRYLRRLEAMMLVADQNVGLVLTGS 122

Query: 125 GDVLEPENG----VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
           GDVLEPE      V AIGSGG+YAL+A RAL+ T   AE IAR+AMSIAADICVYTNHN+
Sbjct: 123 GDVLEPEGDANGAVAAIGSGGNYALAAGRALIDTPADAETIARRAMSIAADICVYTNHNV 182

Query: 181 VLETL 185
           V+E +
Sbjct: 183 VVEKI 187


>gi|300114764|ref|YP_003761339.1| 20S proteasome A and B subunits [Nitrosococcus watsonii C-113]
 gi|299540701|gb|ADJ29018.1| 20S proteasome A and B subunits [Nitrosococcus watsonii C-113]
          Length = 179

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 103/174 (59%), Positives = 129/174 (74%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL+VR+   VVI GDGQVS+   VMK NARKVRRL    +IAGFAG +ADAFTL 
Sbjct: 4   FRGTTILSVRRQEQVVIGGDGQVSMNSIVMKGNARKVRRLFHDQVIAGFAGGTADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E KLE++   L R++VELAKDWR D+ LR LEA++ +AD   + VI+G GDV+EPE 
Sbjct: 64  ERFEAKLEKHQGNLTRAAVELAKDWRSDRSLRRLEALLAVADHKASYVISGNGDVIEPEY 123

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           G++AIGSGG YA +AARAL+ +T  SA  I  KA+SIAADIC+YTN ++ +E L
Sbjct: 124 GLIAIGSGGPYAQAAARALLENTDFSARAIVEKALSIAADICIYTNTHLTIEEL 177


>gi|259417627|ref|ZP_05741546.1| ATP-dependent protease HslV [Silicibacter sp. TrichCH4B]
 gi|259346533|gb|EEW58347.1| ATP-dependent protease HslV [Silicibacter sp. TrichCH4B]
          Length = 185

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 114/184 (61%), Positives = 141/184 (76%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M +  +    H TTI+ VRK   VV+AGDGQVSLGQTV+K +ARKVRRL  G  +++AGF
Sbjct: 1   MAEDQFP-GWHGTTIIGVRKGDEVVVAGDGQVSLGQTVIKGSARKVRRLSPGGYDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGKELYVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR +M +   AE +AR AM+IA+DICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRDAETVARDAMAIASDICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VERI 183


>gi|33594895|ref|NP_882538.1| ATP-dependent protease peptidase subunit [Bordetella parapertussis
           12822]
 gi|33599170|ref|NP_886730.1| ATP-dependent protease peptidase subunit [Bordetella bronchiseptica
           RB50]
 gi|47605656|sp|Q7W215|HSLV_BORPA RecName: Full=ATP-dependent protease subunit HslV
 gi|47605659|sp|Q7WQZ3|HSLV_BORBR RecName: Full=ATP-dependent protease subunit HslV
 gi|33564971|emb|CAE39918.1| ATP-dependent protease heat shock protein [Bordetella
           parapertussis]
 gi|33575216|emb|CAE30679.1| ATP-dependent protease heat shock protein [Bordetella
           bronchiseptica RB50]
          Length = 179

 Score =  177 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 94/177 (53%), Positives = 129/177 (72%), Gaps = 1/177 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + HATTI+ VR+   V + GDGQV+LG  V+K  ARK+RRL    ++AGFAG++ADAFTL
Sbjct: 3   QFHATTIVCVRRGNHVALGGDGQVTLGNIVIKGTARKIRRLYHDKVLAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+R++VEL +DWR D+ LR LEAM+++AD   TLV+TG GDVLEPE
Sbjct: 63  QERFEAKLEKHQGHLMRAAVELTRDWRTDRVLRRLEAMLIVADTEHTLVLTGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           +G+ AIGSGG+Y   +A   L +T+   E I ++++ IA D+C+YTN N V+ETL  
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELPPEAIVKQSLEIAGDLCIYTNQNHVIETLGA 179


>gi|90022342|ref|YP_528169.1| ATP-dependent protease peptidase subunit [Saccharophagus degradans
           2-40]
 gi|122996025|sp|Q21H72|HSLV_SACD2 RecName: Full=ATP-dependent protease subunit HslV
 gi|89951942|gb|ABD81957.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Saccharophagus degradans 2-40]
          Length = 179

 Score =  177 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 102/175 (58%), Positives = 135/175 (77%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR+   VVI GDGQVSLG T+MK NA KVRRL K  +IAGFAG +ADAFTL
Sbjct: 3   QYRGTTILSVRRGNKVVIGGDGQVSLGNTIMKGNACKVRRLYKNQVIAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE +  QL+R++VELAKDWR D+ LR LEA++ +A+K  +L++TG GDV++PE
Sbjct: 63  FERFEAKLEAHDGQLVRAAVELAKDWRTDRALRRLEALLAVANKDASLIVTGNGDVIQPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           N ++AIGSGG++A SAARAL+ +T+  A +I  K++ IA D+CVYTNH+  +E L
Sbjct: 123 NDLIAIGSGGAFAQSAARALLENTELEARDIVEKSLGIAGDVCVYTNHHFTIEEL 177


>gi|145630325|ref|ZP_01786106.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           R3021]
 gi|148827691|ref|YP_001292444.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittGG]
 gi|229844344|ref|ZP_04464484.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           6P18H1]
 gi|166222979|sp|A5UH05|HSLV_HAEIG RecName: Full=ATP-dependent protease subunit HslV
 gi|144984060|gb|EDJ91497.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           R3021]
 gi|148718933|gb|ABR00061.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittGG]
 gi|229812593|gb|EEP48282.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           6P18H1]
          Length = 175

 Score =  177 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T+ SA EI  K++ IA DICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLRIAGDICVFTNTNFTIEEL 173


>gi|149912867|ref|ZP_01901401.1| 20S proteasome, A and B subunits [Roseobacter sp. AzwK-3b]
 gi|149813273|gb|EDM73099.1| 20S proteasome, A and B subunits [Roseobacter sp. AzwK-3b]
          Length = 184

 Score =  177 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 114/175 (65%), Positives = 139/175 (79%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFT 70
            H TTI+ V+K G VV+AGDGQVSLG TV+K +ARKVRRL  G  +++AGFAGS+ADAFT
Sbjct: 8   WHGTTIIGVKKAGTVVVAGDGQVSLGDTVIKGSARKVRRLSPGGYDVVAGFAGSTADAFT 67

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLERLE KLE  P QL R+ V LAKDWR DKYL+ LEAM+++ D     VITG GDVLEP
Sbjct: 68  LLERLESKLESTPGQLQRACVALAKDWRTDKYLQKLEAMLIVTDGDQIYVITGAGDVLEP 127

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E+ V AIGSGG+YAL+AAR +M +  SAE+IAR AM+IAADICVYTN N+ +E++
Sbjct: 128 EHDVTAIGSGGNYALAAARGMMDSDRSAEQIARDAMAIAADICVYTNGNLTVESI 182


>gi|15603614|ref|NP_246688.1| ATP-dependent protease peptidase subunit [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|13431570|sp|P57969|HSLV_PASMU RecName: Full=ATP-dependent protease subunit HslV
 gi|12722165|gb|AAK03833.1| HslV [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 176

 Score =  177 bits (448), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE-NGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++PE + +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEADQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++ALSAARAL+ +T+ SA EI  K++ IA DICVYTN +  +E L
Sbjct: 122 LAIGSGGNFALSAARALVENTELSAREIVEKSLKIAGDICVYTNTHFTIEEL 173


>gi|117923335|ref|YP_863952.1| ATP-dependent protease peptidase subunit [Magnetococcus sp. MC-1]
 gi|189028451|sp|A0L3K3|HSLV_MAGSM RecName: Full=ATP-dependent protease subunit HslV
 gi|117607091|gb|ABK42546.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Magnetococcus sp. MC-1]
          Length = 178

 Score =  177 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 99/177 (55%), Positives = 132/177 (74%), Gaps = 1/177 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL+VR+   VV+ GDGQVS+G TV K+NARKVR +  G ++AGFAGS+ADAFTL 
Sbjct: 2   FKGTTILSVRRGNHVVMGGDGQVSIGNTVAKSNARKVRLMSDGKVLAGFAGSTADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E KL ++   L R++VE+AKDWR D+ LR LEAM+ +AD+  +L+I+G GDVLEPE 
Sbjct: 62  ERFEGKLSKHGGNLTRAAVEMAKDWRTDRVLRRLEAMLAVADEHCSLLISGNGDVLEPEE 121

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           GV+AIGSGG YALSAARAL+  T  +  +I   ++ +AA+ICV+TN+N+ +E L   
Sbjct: 122 GVIAIGSGGPYALSAARALLRHTSLNPRQIVESSLEVAAEICVFTNNNLTIEELGGE 178


>gi|292492405|ref|YP_003527844.1| 20S proteasome A and subunit betas [Nitrosococcus halophilus Nc4]
 gi|291581000|gb|ADE15457.1| 20S proteasome A and B subunits [Nitrosococcus halophilus Nc4]
          Length = 179

 Score =  177 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 99/175 (56%), Positives = 130/175 (74%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR+   VV+ GDGQVS+   VMK NARKVRRL  G ++AGFAG +ADAFTL
Sbjct: 3   QFRGTTILSVRRQEQVVMGGDGQVSMNDIVMKGNARKVRRLFHGQVVAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L R++VELAKDWR D+ LR LEA++ +A+   + +I+G GDV+EPE
Sbjct: 63  FERFEAKLEKHQGNLTRAAVELAKDWRSDRSLRRLEALLAVANPKASYIISGNGDVIEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            G++AIGSGG YA +AARAL+ +T  SA  I  KA++IAADIC+YTN  + +E L
Sbjct: 123 YGLIAIGSGGPYAQAAARALLENTDLSARAITEKALNIAADICIYTNSYLTIEEL 177


>gi|291533223|emb|CBL06336.1| ATP dependent peptidase CodWX, CodW component. Threonine peptidase.
           MEROPS family T01B [Megamonas hypermegale ART12/1]
          Length = 180

 Score =  177 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 106/177 (59%), Positives = 134/177 (75%), Gaps = 2/177 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             ATTI+ V+KDG   IAGDGQV+ GQ  +MKANARKVRRL  G ++AGFAGS ADAFTL
Sbjct: 4   FKATTIIAVKKDGKTAIAGDGQVTFGQAAIMKANARKVRRLYNGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL +Y   L R++VELAKDWR D+ LR LEA++L+AD+   L+++G G+V+EP+
Sbjct: 64  FEKFESKLIEYHGNLTRAAVELAKDWRTDRVLRKLEALLLVADENTMLLLSGNGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
             V AIGSGG YALSA RAL      +A EIA++A++IAADICVYTNHNI++E L  
Sbjct: 124 GNVAAIGSGGFYALSAGRALAKHSNLTAAEIAKEALTIAADICVYTNHNIIVEELDK 180


>gi|158421846|ref|YP_001523138.1| ATP-dependent protease peptidase subunit [Azorhizobium caulinodans
           ORS 571]
 gi|158328735|dbj|BAF86220.1| ATP-dependent protease [Azorhizobium caulinodans ORS 571]
          Length = 197

 Score =  177 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 119/179 (66%), Positives = 148/179 (82%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            H    ++ TTI+TVRK   V IAGDGQV+LGQTV+KANARKVRRLGKG++I GFAG++A
Sbjct: 18  MHSPDTIYGTTIVTVRKGNRVAIAGDGQVTLGQTVLKANARKVRRLGKGDVIGGFAGATA 77

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++AD  ++LV+TG GD
Sbjct: 78  DAFTLFERLEAKLEQYPGQLQRAAVELAKDWRTDRYLRRLEAMMIVADANVSLVLTGTGD 137

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE GV  IGSGG YAL+AARAL+  +++ E I R+++ IAADICVYTN NI++ET+
Sbjct: 138 VLEPEAGVAGIGSGGMYALAAARALLDREDAPEAIVRRSLEIAADICVYTNRNIIVETI 196


>gi|85060146|ref|YP_455848.1| ATP-dependent protease peptidase subunit [Sodalis glossinidius str.
           'morsitans']
 gi|123518774|sp|Q2NQY2|HSLV_SODGM RecName: Full=ATP-dependent protease subunit HslV
 gi|84780666|dbj|BAE75443.1| heat shock protein [Sodalis glossinidius str. 'morsitans']
          Length = 182

 Score =  177 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 99/174 (56%), Positives = 130/174 (74%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VVI GDGQ +LG TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRKGHVVIGGDGQATLGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +A+++ +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEVHQGHLVKAAVELAKDWRTDRMLRRLEALLAVANESDSLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA SAARAL+ +T+  A EI  KA+ IA DIC+YTN    +E L   
Sbjct: 122 AIGSGGPYAQSAARALLENTELGAREIVEKALGIAGDICIYTNQFHTIEELTSK 175


>gi|253573513|ref|ZP_04850856.1| 20S proteasome A and B [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251847041|gb|EES75046.1| 20S proteasome A and B [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 180

 Score =  177 bits (448), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 99/178 (55%), Positives = 136/178 (76%), Gaps = 3/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI  VR +G   IAGDGQV+ G   VMK  A+KVRRL +G ++AGFAGS ADA 
Sbjct: 3   LSFHATTICAVRHNGKGAIAGDGQVTFGQNVVMKQTAKKVRRLYRGQVVAGFAGSVADAI 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE++   L R++VELAKDWR D+ LR LEA++++ DKT  L+I+G G+++E
Sbjct: 63  TLFEKFEGKLEEHSGNLQRAAVELAKDWRQDRVLRKLEALMIVMDKTGMLLISGGGEIIE 122

Query: 130 PENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++ V+AIGSGG++ALSAARAL    T   A++IAR+++ IA++ICVYTN+NI++E L
Sbjct: 123 PDDDVLAIGSGGNFALSAARALKRHATGLEAKDIARESLQIASEICVYTNNNIIVEEL 180


>gi|104783981|ref|YP_610479.1| ATP-dependent protease peptidase subunit [Pseudomonas entomophila
           L48]
 gi|122401538|sp|Q1I3U0|HSLV_PSEE4 RecName: Full=ATP-dependent protease subunit HslV
 gi|95112968|emb|CAK17696.1| peptidase component of the HslUV protease [Pseudomonas entomophila
           L48]
          Length = 176

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 101/175 (57%), Positives = 139/175 (79%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYNGQVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +L+++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EAQLQKHSGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG YA +AARAL++ T  SA EI   A++IA DICV+TNHN+ +E   + +
Sbjct: 122 AMGSGGGYAQAAARALLNKTDLSAREITEAALNIAGDICVFTNHNLTIEEQDLAE 176


>gi|239813915|ref|YP_002942825.1| ATP-dependent protease peptidase subunit [Variovorax paradoxus
           S110]
 gi|259491400|sp|C5CNE3|HSLV_VARPS RecName: Full=ATP-dependent protease subunit HslV
 gi|239800492|gb|ACS17559.1| 20S proteasome A and B subunits [Variovorax paradoxus S110]
          Length = 181

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 103/179 (57%), Positives = 137/179 (76%), Gaps = 5/179 (2%)

Query: 12  KMHATTILTVRKD----GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           + H TTI++VR+       V I GDGQV+LG  V+K  ARKVRRL  G ++AGFAG++AD
Sbjct: 3   QFHGTTIVSVRRKTPQGDQVAIGGDGQVTLGNIVIKGTARKVRRLYHGKVLAGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ER E KLE++   L R++VEL KDWR D+ LR LEAM+ +AD T +L+ITG GDV
Sbjct: 63  AFTLFERFEAKLEKHQGHLTRAAVELTKDWRTDRVLRKLEAMLAVADATTSLIITGNGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           LEPE+GV+AIGSGG+YA SAA+AL+ +T+ +AE+I RK+++IA +IC+YTN N  +E L
Sbjct: 123 LEPEDGVIAIGSGGAYAQSAAKALIDNTELTAEQIVRKSLAIAGEICIYTNMNHTVEAL 181


>gi|110677842|ref|YP_680849.1| ATP-dependent protease peptidase subunit [Roseobacter denitrificans
           OCh 114]
 gi|123065963|sp|Q16CY0|HSLV_ROSDO RecName: Full=ATP-dependent protease subunit HslV
 gi|109453958|gb|ABG30163.1| ATP-dependent protease hslV [Roseobacter denitrificans OCh 114]
          Length = 185

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 120/184 (65%), Positives = 144/184 (78%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M    +    H TTI+ V+K G VVIAGDGQVSLGQTV+K  ARKVRRL  G  +++AGF
Sbjct: 1   MARDEFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM++++D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDIFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG+YAL+AAR +M +  SAEE+AR AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNYALAAARGMMDSPRSAEEVARDAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +ET+
Sbjct: 180 VETI 183


>gi|237747302|ref|ZP_04577782.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
           HOxBLS]
 gi|229378653|gb|EEO28744.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
           HOxBLS]
          Length = 178

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 129/176 (73%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  V+K  ARKVR+L  G ++AGFAG +ADAFTL
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVIKGTARKVRKLYNGRVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +ER E KLE++   LLRSSVELAKDWR D+ LR LEAM+L+AD+  TLVITG GDVLEPE
Sbjct: 63  IERFEAKLEKHQGNLLRSSVELAKDWRTDRILRRLEAMLLVADRESTLVITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            GV AIGSGG+Y   +A     +T+    EI  K+++IA D+C+YTN   ++ETL 
Sbjct: 123 EGVGAIGSGGAYAQSAALALQRNTELPPAEIVSKSLAIAGDLCIYTNQAHIIETLD 178


>gi|163803565|ref|ZP_02197433.1| ATP-dependent protease peptidase subunit [Vibrio sp. AND4]
 gi|159172652|gb|EDP57508.1| ATP-dependent protease peptidase subunit [Vibrio sp. AND4]
          Length = 183

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 102/173 (58%), Positives = 136/173 (78%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNQVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG+YA +AA AL+ +T+  A +IA KA++IA DICV+TNH   +E L+ 
Sbjct: 122 AIGSGGAYAQAAATALLENTELDARKIAEKALNIAGDICVFTNHQHTVEELES 174


>gi|99082689|ref|YP_614843.1| ATP-dependent protease peptidase subunit [Ruegeria sp. TM1040]
 gi|123378597|sp|Q1GCN5|HSLV_SILST RecName: Full=ATP-dependent protease subunit HslV
 gi|99038969|gb|ABF65581.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Ruegeria sp. TM1040]
          Length = 185

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 114/186 (61%), Positives = 141/186 (75%), Gaps = 3/186 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M +  +    H TTI+ VRK   VV+AGDGQVSLGQTV+K +ARKVRRL  G  +++AGF
Sbjct: 1   MAEDQFP-GWHGTTIIGVRKGDEVVVAGDGQVSLGQTVIKGSARKVRRLSPGGYDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGKDLYVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR +M +   AE +AR AM+IA+DICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRDAETVARDAMAIASDICVYTNGNLT 179

Query: 182 LETLKV 187
           +E +  
Sbjct: 180 VERIGK 185


>gi|167579396|ref|ZP_02372270.1| ATP-dependent protease peptidase subunit [Burkholderia
           thailandensis TXDOH]
 gi|167617496|ref|ZP_02386127.1| ATP-dependent protease peptidase subunit [Burkholderia
           thailandensis Bt4]
 gi|257140627|ref|ZP_05588889.1| ATP-dependent protease peptidase subunit [Burkholderia
           thailandensis E264]
          Length = 178

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA +AARAL  +T  S  EI  K+++IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKSLAIAGDMCIYTNHNRIIETIE 178


>gi|312792641|ref|YP_004025564.1| 20S proteasome subunits A and B [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179781|gb|ADQ39951.1| 20S proteasome A and B subunits [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 176

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 98/175 (56%), Positives = 129/175 (73%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V IAGDGQV+     +MK+ A+KVR+L  G ++ GFAGS ADA TL
Sbjct: 2   FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+KLEQ    L +S VELAK+WR DK LR LEA++++ADK    V++G G+V+EP+
Sbjct: 62  CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKEHLFVVSGSGEVVEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + + AIGSGG YAL+AARAL+ +T  SA EIA+KA+ IAA ICVYTN+NI +  L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQNTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176


>gi|71905845|ref|YP_283432.1| ATP-dependent protease peptidase subunit [Dechloromonas aromatica
           RCB]
 gi|123628365|sp|Q47JL9|HSLV_DECAR RecName: Full=ATP-dependent protease subunit HslV
 gi|71845466|gb|AAZ44962.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Dechloromonas aromatica RCB]
          Length = 178

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 106/176 (60%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  V+KA ARKVRRL  G I+AGFAG +ADAFTL
Sbjct: 3   QYHGTTILSVRRGNSVAMGGDGQVTLGNIVIKATARKVRRLYNGRILAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KL+++   LLRS+VELAKDWR D+ LR LEAM+ +AD+ ++L+ITG GDVLEPE
Sbjct: 63  FERFEAKLDKHQGNLLRSAVELAKDWRSDRALRRLEAMLSVADREVSLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G++AIGSGGSYA SAARAL+ +T+ +  +I  K++ IA DIC+YTN N  LE L+
Sbjct: 123 QGIVAIGSGGSYAQSAARALLENTELAPRDIVTKSLEIAGDICIYTNRNFTLEVLE 178


>gi|284037605|ref|YP_003387535.1| 20S proteasome A and subunit betas [Spirosoma linguale DSM 74]
 gi|283816898|gb|ADB38736.1| 20S proteasome A and B subunits [Spirosoma linguale DSM 74]
          Length = 179

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 2/176 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+HATT++ +R +G V +  DGQ ++G TV K+N RKVR L  G ++AGFAGS+ADAFTL
Sbjct: 4   KIHATTVVGIRHNGHVALGADGQATMGNTVAKSNVRKVRVLMGGKVLAGFAGSTADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +ER E+KL  Y   L R+++ELAKDWR D+YLR LEAM+++A K   L+++G GDV+EP+
Sbjct: 64  IERFEEKLNAYGGNLKRAAIELAKDWRTDRYLRKLEAMLIVASKDDLLLVSGTGDVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             V AIGSGG YA SAA AL    T+ SAEE+ R+++ IAAD+C+YTNHN+V+ETL
Sbjct: 124 ADVAAIGSGGMYAQSAALALKKHATELSAEEMVRESLHIAADVCIYTNHNLVVETL 179


>gi|254456381|ref|ZP_05069810.1| ATP-dependent protease [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083383|gb|EDZ60809.1| ATP-dependent protease [Candidatus Pelagibacter sp. HTCC7211]
          Length = 171

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 98/170 (57%), Positives = 134/170 (78%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRK+  VV+AGDGQVS+G TV+K+ A KVR++ K +++AGFAGS+ADA TL ERL
Sbjct: 2   TTIVLVRKNNEVVVAGDGQVSMGNTVVKSTASKVRKIEKRDVVAGFAGSTADALTLFERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E K+E++   L R++VELAKDWR DKYLR LEA++ I DK  + +I+G GDVLEPE  V+
Sbjct: 62  EAKIEKHAGNLSRAAVELAKDWRTDKYLRRLEALMAIGDKENSYIISGTGDVLEPEGDVI 121

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            IGSGG+YAL+A + L+ T  SAEE+A+KA+ +A++ICV+TN NI +  +
Sbjct: 122 GIGSGGNYALAAGKVLIETDMSAEEVAKKAIKVASEICVFTNDNIKVLKI 171


>gi|127511309|ref|YP_001092506.1| ATP-dependent protease peptidase subunit [Shewanella loihica PV-4]
 gi|166223000|sp|A3Q9U9|HSLV_SHELP RecName: Full=ATP-dependent protease subunit HslV
 gi|126636604|gb|ABO22247.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Shewanella loihica PV-4]
          Length = 174

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L+R++VE+AKDWR D+ LR LEA++ +AD   +L+ITG GDV++PEN ++
Sbjct: 62  ESKLEMHQGHLMRAAVEMAKDWRSDRVLRKLEALLAVADTECSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG++A +AA AL+ +T  SA+EIA K+++IA DICV+TN    +E L
Sbjct: 122 AIGSGGNFAQAAATALLENTDLSAKEIAEKSLTIAGDICVFTNQFKTIEEL 172


>gi|238794364|ref|ZP_04637975.1| ATP-dependent protease hslV [Yersinia intermedia ATCC 29909]
 gi|238726265|gb|EEQ17808.1| ATP-dependent protease hslV [Yersinia intermedia ATCC 29909]
          Length = 176

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 101/172 (58%), Positives = 135/172 (78%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAARAL+ +T+ SA++I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAARALLDNTELSAKDIVEKSLSIAGDICIYTNRFQTIEELT 173


>gi|167037675|ref|YP_001665253.1| ATP-dependent protease peptidase subunit [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|307264859|ref|ZP_07546421.1| 20S proteasome A and B subunits [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|320116090|ref|YP_004186249.1| 20S proteasome subunits A/B [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|326389489|ref|ZP_08211056.1| 20S proteasome, A and B subunits [Thermoanaerobacter ethanolicus JW
           200]
 gi|238065943|sp|B0K9V4|HSLV_THEP3 RecName: Full=ATP-dependent protease subunit HslV
 gi|166856509|gb|ABY94917.1| ATP-dependent protease HslVU (ClpYQ) peptidase subunit-like protein
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|306920117|gb|EFN50329.1| 20S proteasome A and B subunits [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|319929181|gb|ADV79866.1| 20S proteasome A and B subunits [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|325994494|gb|EGD52919.1| 20S proteasome, A and B subunits [Thermoanaerobacter ethanolicus JW
           200]
          Length = 176

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 90/175 (51%), Positives = 124/175 (70%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              TTI+ VRK   V +AGDGQ++ G  T++K  A+K+RRL  G +I GFAGS ADA TL
Sbjct: 2   FKGTTIIAVRKGDKVSVAGDGQITFGENTILKHGAKKIRRLYNGEVIVGFAGSVADALTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ++ E+KLEQY   L R++VELA++WR DK LR LEA+++  DK  TL+I+G G+V+EP+
Sbjct: 62  SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAVDKKDTLLISGTGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             V+ IGSGG+Y   +A     +T    E+IA+KA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTDLDTEDIAKKALEIASKICVYTNNNITVETL 176


>gi|298530976|ref|ZP_07018377.1| 20S proteasome A and B subunits [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298508999|gb|EFI32904.1| 20S proteasome A and B subunits [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 178

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 106/178 (59%), Positives = 143/178 (80%), Gaps = 2/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +    TTIL V+K+G + +AGDGQV++GQ++ MK  ARKVRR+ K +++AGFAG++ADAF
Sbjct: 1   MTFEGTTILAVKKNGRIAMAGDGQVTMGQSIVMKHTARKVRRMYKDSVLAGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER E KLE+Y   LLR+SVELAK+WRMDKYLR LEA++++ADK   L+I+G GDV+E
Sbjct: 61  TLFERFEAKLEEYRGNLLRASVELAKEWRMDKYLRRLEALLVVADKENVLIISGTGDVIE 120

Query: 130 PENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           P++G+ AIGSGG YAL+A+RAL+ +T+ SAE+I  + M IAA ICVYTN+NIV E + 
Sbjct: 121 PDDGIAAIGSGGPYALAASRALVDNTELSAEDIVNQGMQIAARICVYTNNNIVTEKID 178


>gi|46579988|ref|YP_010796.1| ATP-dependent protease peptidase subunit [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120602600|ref|YP_967000.1| ATP-dependent protease peptidase subunit [Desulfovibrio vulgaris
           DP4]
 gi|85542201|sp|Q72BQ7|HSLV_DESVH RecName: Full=ATP-dependent protease subunit HslV
 gi|166221637|sp|A1VDQ7|HSLV_DESVV RecName: Full=ATP-dependent protease subunit HslV
 gi|46449404|gb|AAS96055.1| ATP-dependent protease hslV [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120562829|gb|ABM28573.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Desulfovibrio vulgaris DP4]
 gi|311234014|gb|ADP86868.1| 20S proteasome A and B subunits [Desulfovibrio vulgaris RCH1]
          Length = 181

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 97/180 (53%), Positives = 131/180 (72%), Gaps = 2/180 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++  TTIL VR    V IAGDGQV++GQ++ MK +ARKVRRL  G ++AGFAGS+ADAF
Sbjct: 1   MELKGTTILAVRGAQGVTIAGDGQVTMGQSIVMKHSARKVRRLYNGRVVAGFAGSTADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E  E KLE++   L+R++VE+AK WR DKYLR LEAM+L+AD    LV++G GDV+E
Sbjct: 61  TLFEHFEAKLEEHRGNLVRAAVEMAKSWRKDKYLRRLEAMLLVADNEHILVLSGNGDVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           P++G+ AIGSGG Y   +A      TQ  AE IAR+AM IA +ICV+TN ++ +E+ +  
Sbjct: 121 PDDGIAAIGSGGPYALAAARALARHTQLDAETIAREAMRIAGEICVFTNDHLTVESAETQ 180


>gi|219669730|ref|YP_002460165.1| ATP-dependent protease peptidase subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|254802410|sp|B8FRG9|HSLV_DESHD RecName: Full=ATP-dependent protease subunit HslV
 gi|219539990|gb|ACL21729.1| 20S proteasome A and B subunits [Desulfitobacterium hafniense
           DCB-2]
          Length = 176

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 103/175 (58%), Positives = 136/175 (77%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V +AGDGQV++GQ TVMK  ARKVRRL  G ++AGFAGS ADAFTL
Sbjct: 2   FHATTIVAVKKGDQVAMAGDGQVTMGQATVMKHKARKVRRLFHGKVLAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L R++VELAKDWRMDK LRNLEA++++ADK   L+I+G G+V+EP+
Sbjct: 62  FEKFENKLEEYQGNLQRAAVELAKDWRMDKALRNLEALLIVADKQSMLLISGSGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG+YAL+AARAL  +T     ++ ++AM +A+ ICVYTN  I++E L
Sbjct: 122 DGIAAIGSGGNYALAAARALVKNTDLQPAQLVQEAMEVASSICVYTNDQIIVEEL 176


>gi|323701842|ref|ZP_08113512.1| 20S proteasome, A and B subunits [Desulfotomaculum nigrificans DSM
           574]
 gi|323533146|gb|EGB23015.1| 20S proteasome, A and B subunits [Desulfotomaculum nigrificans DSM
           574]
          Length = 176

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 101/175 (57%), Positives = 133/175 (76%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V++   V +AGDGQV+ G  T+MK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 2   FHATTIVAVKRGNKVAVAGDGQVTFGQNTIMKHTARKVRRLHQGQVLAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE++   L+R++VELAKDWR DKYLR LEAM+++A+K   LV++G G+V+EP+
Sbjct: 62  FEKFEGKLEEFHGNLMRAAVELAKDWRTDKYLRALEAMLIVANKENLLVLSGNGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            GV AIGSGG Y   +A   L  T+ S  E+AR+A+ +AADICVYTNHNIV+E +
Sbjct: 122 EGVTAIGSGGPYALAAARALLKHTEMSPAEVAREALGLAADICVYTNHNIVVEEI 176


>gi|304316914|ref|YP_003852059.1| 20S proteasome A and subunit betas [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778416|gb|ADL68975.1| 20S proteasome A and B subunits [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 176

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 94/175 (53%), Positives = 129/175 (73%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              TTI+ VR+D  V IAGDGQV+ G  T++K  A+K+RRL    ++ GFAGS ADA TL
Sbjct: 2   FKGTTIVAVRRDNKVSIAGDGQVTFGENTILKHGAKKIRRLYNDEVLIGFAGSVADALTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E+KLEQY   L R++VELA++WR DK L+ LEA+++ ADK +TLVI+G G+V+EP+
Sbjct: 62  SEMFEEKLEQYGGNLKRAAVELAQEWRKDKVLKKLEALLIAADKNVTLVISGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYAL-SAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           N V+AIGSGG++A+ +A     +T  S EEIARK++ IA+ ICVYTN +I +E+L
Sbjct: 122 NDVIAIGSGGNFAMSAALALRYNTNLSVEEIARKSLEIASQICVYTNDHITVESL 176


>gi|304392728|ref|ZP_07374668.1| ATP-dependent protease HslVU, peptidase subunit [Ahrensia sp.
           R2A130]
 gi|303295358|gb|EFL89718.1| ATP-dependent protease HslVU, peptidase subunit [Ahrensia sp.
           R2A130]
          Length = 188

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 130/188 (69%), Positives = 159/188 (84%), Gaps = 3/188 (1%)

Query: 4   MGDKHYA--VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAG 60
           M  ++ +   K+HATTI+ VRK G VV+AGDGQ S+GQTVMK+N++KVRR+G  G +IAG
Sbjct: 1   MAHENESWLPKVHATTIIMVRKGGQVVLAGDGQASMGQTVMKSNSKKVRRIGKDGKVIAG 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAGS+ADAFTLLERLE KLEQYP QL+R+SVELAKDWR D+YLR LEAM+L+ADK ++L 
Sbjct: 61  FAGSTADAFTLLERLEGKLEQYPGQLMRASVELAKDWRTDRYLRKLEAMMLVADKEVSLC 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
           +TG+GDV EPE+GVMAIGSGG+YAL+AARAL  T   AE IARKAM+IAADICVYTNHN+
Sbjct: 121 LTGVGDVFEPEHGVMAIGSGGNYALAAARALYDTDADAETIARKAMTIAADICVYTNHNL 180

Query: 181 VLETLKVG 188
           V+ET+   
Sbjct: 181 VVETMDEK 188


>gi|326385661|ref|ZP_08207291.1| ATP-dependent protease peptidase subunit [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209819|gb|EGD60606.1| ATP-dependent protease peptidase subunit [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 195

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 118/195 (60%), Positives = 146/195 (74%), Gaps = 10/195 (5%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRR------LGK 54
           M      H  ++ H TTI+ VRK+G  VIAGDGQVS+G TVMK NARKVRR       G+
Sbjct: 1   MTDQAASHGLIQWHGTTIIGVRKNGRTVIAGDGQVSMGNTVMKPNARKVRRLGAPGEDGR 60

Query: 55  GNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
           G +IAGFAG++ADAFTL ERLE+KLE +  QLLR++VELAKDWR DKYLRNLEA++++AD
Sbjct: 61  GKVIAGFAGATADAFTLFERLERKLEAHRGQLLRAAVELAKDWRTDKYLRNLEALMIVAD 120

Query: 115 KTITLVITGMGDVLEPE----NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
               LV+TG GDVLEPE      + AIGSGG+YAL+AARAL   ++ AE+IAR+AM +AA
Sbjct: 121 AETLLVLTGNGDVLEPEAAGDTVIAAIGSGGNYALAAARALADYESDAEQIARRAMKVAA 180

Query: 171 DICVYTNHNIVLETL 185
           DICVYTN  + LE +
Sbjct: 181 DICVYTNDRVTLEEI 195


>gi|154246237|ref|YP_001417195.1| ATP-dependent protease peptidase subunit [Xanthobacter
           autotrophicus Py2]
 gi|154160322|gb|ABS67538.1| 20S proteasome A and B subunits [Xanthobacter autotrophicus Py2]
          Length = 182

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 118/179 (65%), Positives = 148/179 (82%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H    ++ TTI+TVRK   V IAGDGQV+LGQTV+K+NARKVRRLG+G++I GFAG++A
Sbjct: 2   QHSPDTIYGTTIVTVRKGSRVAIAGDGQVTLGQTVLKSNARKVRRLGRGDVIGGFAGATA 61

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++AD +I+LV+TG GD
Sbjct: 62  DAFTLFERLEAKLEQYPGQLQRAAVELAKDWRTDRYLRRLEAMMIVADASISLVLTGTGD 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE GV  IGSGG +AL+AARAL+  +   E I R+++ IAADICVYTN NIV+ET+
Sbjct: 122 VLEPEVGVAGIGSGGMFALAAARALLDREEDPEAIVRRSLEIAADICVYTNRNIVVETI 180


>gi|328865749|gb|EGG14135.1| Heat shock protein HslV [Dictyostelium fasciculatum]
          Length = 271

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 108/180 (60%), Positives = 141/180 (78%), Gaps = 1/180 (0%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H  ++  ATTIL+VR+ G VVI GDGQV+ G +++K NA+K+R+L +G I+AGFAGS AD
Sbjct: 48  HDPMRKKATTILSVRRGGKVVIIGDGQVTQGHSIVKPNAKKIRKLHEGTIVAGFAGSVAD 107

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL + LEKKL ++   L +S VELA+ WR DKY R LEA I++ADK ITL I G GDV
Sbjct: 108 AFTLFDLLEKKLTEHRGLLTKSCVELAQQWRTDKYYRKLEASIIVADKDITLNIDGNGDV 167

Query: 128 LEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           LEP +GV AIGSGG +AL+AARAL++  + SAEEIA+++M IAADIC+YTNHN ++ET+ 
Sbjct: 168 LEPNDGVSAIGSGGEFALAAARALLTVPELSAEEIAQRSMKIAADICIYTNHNFIMETID 227


>gi|126666727|ref|ZP_01737704.1| ATP-dependent protease peptidase subunit [Marinobacter sp. ELB17]
 gi|126628772|gb|EAZ99392.1| ATP-dependent protease peptidase subunit [Marinobacter sp. ELB17]
          Length = 176

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 105/175 (60%), Positives = 133/175 (76%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR+D  V + GDGQVS G TVMK NARKVRRL  G ++AGFAG +ADAFTL ER 
Sbjct: 2   TTILSVRRDDEVTMGGDGQVSFGNTVMKGNARKVRRLYNGQVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L R++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV+EPE G++
Sbjct: 62  EAQLEKHQGNLTRAAVELAKDWRSDRALRKLEALLAVADKTASLIITGNGDVIEPEMGLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           AIGSGG +A ++ARAL+ +T  SA EI  K + IAADIC+YTN N  +E L   D
Sbjct: 122 AIGSGGPFAQASARALLENTNMSAREITEKGLIIAADICIYTNQNRTIEVLSAND 176


>gi|312135860|ref|YP_004003198.1| 20S proteasome subunits A and B [Caldicellulosiruptor owensensis
           OL]
 gi|311775911|gb|ADQ05398.1| 20S proteasome A and B subunits [Caldicellulosiruptor owensensis
           OL]
          Length = 176

 Score =  176 bits (446), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 98/175 (56%), Positives = 129/175 (73%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V IAGDGQV+     +MK+ A+KVR+L  G ++ GFAGS ADA TL
Sbjct: 2   FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+KLEQ    L +S VELAK+WR DK LR LEA++++ADK    V++G G+V+EP+
Sbjct: 62  CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKDHLFVVSGSGEVVEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + + AIGSGG YAL+AARAL+ +T  SA EIA+KA+ IAA ICVYTN+NI +  L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQNTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176


>gi|225677228|ref|ZP_03788221.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590752|gb|EEH11986.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 184

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 121/181 (66%), Positives = 154/181 (85%), Gaps = 1/181 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H   KM+ TTIL++RKD  VV+ GDGQVSLG TV+K+ A+KVRRL   ++IAGFAG++A
Sbjct: 3   QHDNNKMYGTTILSIRKDKSVVVIGDGQVSLGHTVIKSGAKKVRRLSGDSVIAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GD
Sbjct: 63  DAFTLFERLESKLDKHPGQLVRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE+G+ AIGSGG++ALSAARAL+     S EEIA+KAM IAADICVYTNHN+++E +
Sbjct: 123 VLEPEDGIAAIGSGGNFALSAARALIDIKGISIEEIAKKAMKIAADICVYTNHNVIIEKI 182

Query: 186 K 186
           +
Sbjct: 183 E 183


>gi|153825157|ref|ZP_01977824.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-2]
 gi|153829486|ref|ZP_01982153.1| protease HslVU, subunit HslV [Vibrio cholerae 623-39]
 gi|229524653|ref|ZP_04414058.1| ATP-dependent protease HslV [Vibrio cholerae bv. albensis VL426]
 gi|229527400|ref|ZP_04416792.1| ATP-dependent protease HslV [Vibrio cholerae 12129(1)]
 gi|148875069|gb|EDL73204.1| protease HslVU, subunit HslV [Vibrio cholerae 623-39]
 gi|149741303|gb|EDM55345.1| protease HslVU, subunit HslV [Vibrio cholerae MZO-2]
 gi|229335032|gb|EEO00517.1| ATP-dependent protease HslV [Vibrio cholerae 12129(1)]
 gi|229338234|gb|EEO03251.1| ATP-dependent protease HslV [Vibrio cholerae bv. albensis VL426]
 gi|327485148|gb|AEA79555.1| ATP-dependent protease HslV [Vibrio cholerae LMA3894-4]
          Length = 185

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 102/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG+YA +AA AL+ +T+  A  IA KA++IA DICV+TNH+  +E L++
Sbjct: 122 AIGSGGNYAQAAAIALLENTELDARMIAEKALNIAGDICVFTNHHHTIEELEI 174


>gi|11513574|pdb|1G3I|G Chain G, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513575|pdb|1G3I|H Chain H, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513576|pdb|1G3I|I Chain I, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513577|pdb|1G3I|J Chain J, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513578|pdb|1G3I|K Chain K, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513579|pdb|1G3I|L Chain L, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513580|pdb|1G3I|M Chain M, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513581|pdb|1G3I|N Chain N, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513582|pdb|1G3I|O Chain O, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513583|pdb|1G3I|P Chain P, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513584|pdb|1G3I|Q Chain Q, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513585|pdb|1G3I|R Chain R, Crystal Structure Of The Hsluv Protease-Chaperone Complex
 gi|11513593|pdb|1G3K|A Chain A, Crystal Structure Of The H. Influenzae Protease Hslv At
           1.9 A Resolution
 gi|11513594|pdb|1G3K|B Chain B, Crystal Structure Of The H. Influenzae Protease Hslv At
           1.9 A Resolution
 gi|11513595|pdb|1G3K|C Chain C, Crystal Structure Of The H. Influenzae Protease Hslv At
           1.9 A Resolution
 gi|17943074|pdb|1JJW|A Chain A, Structure Of Haemophilus Influenzae Hslv Protein At 1.9 A
           Resolution
 gi|17943075|pdb|1JJW|B Chain B, Structure Of Haemophilus Influenzae Hslv Protein At 1.9 A
           Resolution
 gi|17943076|pdb|1JJW|C Chain C, Structure Of Haemophilus Influenzae Hslv Protein At 1.9 A
           Resolution
 gi|21465938|pdb|1KYI|G Chain G, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465939|pdb|1KYI|H Chain H, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465940|pdb|1KYI|I Chain I, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465941|pdb|1KYI|J Chain J, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465942|pdb|1KYI|K Chain K, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465943|pdb|1KYI|L Chain L, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465944|pdb|1KYI|M Chain M, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465945|pdb|1KYI|N Chain N, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465946|pdb|1KYI|O Chain O, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465947|pdb|1KYI|P Chain P, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465948|pdb|1KYI|Q Chain Q, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|21465949|pdb|1KYI|R Chain R, Hsluv (H. Influenzae)-Nlvs Vinyl Sulfone Inhibitor Complex
 gi|33357695|pdb|1OFH|G Chain G, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357696|pdb|1OFH|H Chain H, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357697|pdb|1OFH|I Chain I, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357698|pdb|1OFH|L Chain L, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357699|pdb|1OFH|M Chain M, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357700|pdb|1OFH|N Chain N, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357708|pdb|1OFI|G Chain G, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357709|pdb|1OFI|H Chain H, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357710|pdb|1OFI|I Chain I, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357711|pdb|1OFI|L Chain L, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357712|pdb|1OFI|M Chain M, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
 gi|33357713|pdb|1OFI|N Chain N, Asymmetric Complex Between Hslv And I-Domain Deleted Hslu
           (H. Influenzae)
          Length = 174

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 1   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 61  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 120

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T+ SA EI  K++ IA DICV+TN N  +E L
Sbjct: 121 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 172


>gi|23010577|ref|ZP_00051217.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Magnetospirillum magnetotacticum MS-1]
          Length = 176

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 122/175 (69%), Positives = 144/175 (82%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MHATTIL VRK G VVI GDGQVSLGQT++K NARKVRRL KG++I GFAG++ADAFTL 
Sbjct: 1   MHATTILMVRKGGRVVIGGDGQVSLGQTIVKGNARKVRRLAKGSVIGGFAGATADAFTLF 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLEQYP QL R+ VEL KDWR D+YLR LEAM+L+AD+ ++L+++G GDVLEPE 
Sbjct: 61  ERLEGKLEQYPGQLTRACVELTKDWRTDRYLRRLEAMMLVADREVSLLLSGSGDVLEPET 120

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           GVMAIGSGG+YAL+AARAL      AE I R+AM IAADICVYTN ++V+E L  
Sbjct: 121 GVMAIGSGGNYALAAARALEEGDLDAEAIVRRAMKIAADICVYTNGSLVIEALDA 175


>gi|312876489|ref|ZP_07736472.1| 20S proteasome A and B subunits [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311796700|gb|EFR13046.1| 20S proteasome A and B subunits [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 176

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 99/175 (56%), Positives = 130/175 (74%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V IAGDGQV+     +MK+ A+KVR+L  G ++ GFAGS ADA TL
Sbjct: 2   FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+KLEQ    L +S VELAK+WR DK LR LEA++++ADK   LV++G G+V+EP+
Sbjct: 62  CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKEHLLVVSGSGEVVEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + + AIGSGG YAL+AARAL+ +T  SA EIA+KA+ IAA ICVYTN+NI +  L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQNTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176


>gi|167585120|ref|ZP_02377508.1| 20S proteasome A and B subunits [Burkholderia ubonensis Bu]
          Length = 178

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD   TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADANTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL+ +T+ S  EI  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|325290381|ref|YP_004266562.1| ATP dependent peptidase CodWX, CodW component [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965782|gb|ADY56561.1| ATP dependent peptidase CodWX, CodW component [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 176

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 93/175 (53%), Positives = 127/175 (72%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K+  V IAGDGQV+ GQ TVMK  ARK+R+L  G ++AGFAGS ADAFTL
Sbjct: 2   FHATTIVAVKKNNQVAIAGDGQVTFGQATVMKHGARKIRKLYHGKVVAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E +LE++   L R++VEL K+WR D+ LR+LEA++++ADK   L+I+G G+V+EP+
Sbjct: 62  FEKFEGRLEEFHGNLQRAAVELVKEWRTDRMLRHLEALLIVADKERILIISGSGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + + AIGSGG+Y   +A         SA E+ R+A+ IAA ICVYTN NI +E L
Sbjct: 122 DDIAAIGSGGNYALAAARALARHADLSAGELVREALKIAASICVYTNENITVEEL 176


>gi|187922350|ref|YP_001893992.1| ATP-dependent protease peptidase subunit [Burkholderia phytofirmans
           PsJN]
 gi|238065844|sp|B2T1N9|HSLV_BURPP RecName: Full=ATP-dependent protease subunit HslV
 gi|187713544|gb|ACD14768.1| 20S proteasome A and B subunits [Burkholderia phytofirmans PsJN]
          Length = 178

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 95/176 (53%), Positives = 127/176 (72%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  A+KVRR+  G ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG     +A     +T+ S  EI  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAATALAHNTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|238789598|ref|ZP_04633382.1| ATP-dependent protease hslV [Yersinia frederiksenii ATCC 33641]
 gi|238722351|gb|EEQ14007.1| ATP-dependent protease hslV [Yersinia frederiksenii ATCC 33641]
          Length = 174

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 100/172 (58%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAARAL+ +T+  A +I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAARALLENTELDARDIVEKSLSIAGDICIYTNRFQTIEELT 173


>gi|167835015|ref|ZP_02461898.1| ATP-dependent protease peptidase subunit [Burkholderia
           thailandensis MSMB43]
          Length = 178

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATSTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T  S  EI  KA+ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTDLSPREIVEKALEIAGDMCIYTNHNRIIETIE 178


>gi|296283399|ref|ZP_06861397.1| ATP-dependent protease peptidase subunit [Citromicrobium
           bathyomarinum JL354]
          Length = 185

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 111/184 (60%), Positives = 145/184 (78%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M      H   + H TTI+ V++    V+AGDGQVS+G TVMK NA+KVRR+G G ++AG
Sbjct: 1   MSNSAASHGLQQWHGTTIIGVKRGDKTVLAGDGQVSMGNTVMKPNAKKVRRIGDGKVVAG 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAG++ADAFTL ERLE+KL+QY  QL+R++VELAKDWR DKYLRNLEA++++ADK   LV
Sbjct: 61  FAGATADAFTLFERLERKLDQYSGQLMRAAVELAKDWRTDKYLRNLEALMIVADKDTMLV 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
           +TG GDVLEPE G+ AIGSGG+YAL+AARAL   +   E+IAR+AM++AA++CV+TN  +
Sbjct: 121 LTGNGDVLEPEGGIAAIGSGGNYALAAARALSDYETDPEKIARRAMAVAAEVCVFTNDQV 180

Query: 181 VLET 184
            LET
Sbjct: 181 TLET 184


>gi|330720267|gb|EGG98628.1| ATP-dependent protease HslV [gamma proteobacterium IMCC2047]
          Length = 176

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 101/173 (58%), Positives = 137/173 (79%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VRK+G VV+ GDGQVSLG TVMK NARKVRRL +  +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRKNGKVVLGGDGQVSLGNTVMKGNARKVRRLYRDQVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ L+ LEA++ IA+K  +L+I+G GDV+EPE+G++
Sbjct: 62  EAQLEKHQGHLMRAAVELAKDWRTDRSLQRLEALLAIANKDHSLIISGNGDVIEPEHGLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG +A +AA AL+ ++  SA EI  K++ IAA+ICV+TN N  +E L  
Sbjct: 122 AIGSGGPFAQAAALALIENSDLSAREITEKSLEIAANICVFTNQNRTIEELDS 174


>gi|85859269|ref|YP_461471.1| ATP-dependent protease peptidase subunit [Syntrophus aciditrophicus
           SB]
 gi|85722360|gb|ABC77303.1| ATP-dependent endopeptidase hsl proteolytic subunit [Syntrophus
           aciditrophicus SB]
          Length = 212

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 99/185 (53%), Positives = 132/185 (71%), Gaps = 1/185 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +    KM  TTI+ V+  G V +AGDGQV+L  TVMK  ARKVRRL    +I GFAG++A
Sbjct: 13  ERKMQKMRGTTIVAVKHKGKVTVAGDGQVTLDVTVMKHGARKVRRLYHDEVIVGFAGTTA 72

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL +R + KLEQY   LLR++VEL KDWR D+ LR+LEA+++   +   L+I+G GD
Sbjct: 73  DAFTLFDRFDSKLEQYNGNLLRAAVELTKDWRTDRILRHLEALMIAVSRDHFLMISGNGD 132

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+E ++ VMAIGSGG YAL+AARA++  +   A EIAR+A+ IA++IC+YTN NI +E L
Sbjct: 133 VIESDDDVMAIGSGGPYALAAARAMIRYSDLPATEIAREAVQIASEICIYTNDNITVEEL 192

Query: 186 KVGDE 190
               E
Sbjct: 193 DTEQE 197


>gi|288553071|ref|YP_003425006.1| ATP-dependent protease peptidase subunit [Bacillus pseudofirmus
           OF4]
 gi|288544231|gb|ADC48114.1| ATP-dependent protease peptidase subunit [Bacillus pseudofirmus
           OF4]
          Length = 183

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 96/183 (52%), Positives = 134/183 (73%), Gaps = 3/183 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSS 65
            +  +  HATTI  V+ +G   +AGDGQV+LG   VMK  A+KVRR+ +G ++AGFAGS 
Sbjct: 1   MNEKMTFHATTIFAVQHNGRCAMAGDGQVTLGNAVVMKHTAKKVRRIYQGKVLAGFAGSV 60

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTL E+ E +LE++   L R++VELAK+WR DK LR LEAM+++ ++   L+I+G G
Sbjct: 61  ADAFTLFEKFESRLEEFNGNLKRAAVELAKEWRSDKVLRQLEAMLIVMNREHILLISGTG 120

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           +V+EP++G++AIGSGG+YALSA RAL       SA+EIA  A+  A +ICVYTN N+V+E
Sbjct: 121 EVIEPDDGILAIGSGGNYALSAGRALKKHAPDLSAKEIATAALETAGEICVYTNLNLVVE 180

Query: 184 TLK 186
            L+
Sbjct: 181 ELQ 183


>gi|163738009|ref|ZP_02145425.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
           BS107]
 gi|161388625|gb|EDQ12978.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
           BS107]
          Length = 187

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 117/188 (62%), Positives = 144/188 (76%), Gaps = 3/188 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M D  +    H TTI+ V+K G VVIAGDGQVSLGQTV+K +ARKVRRL  G  +++AGF
Sbjct: 1   MADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGSARKVRRLSPGGFDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGADMFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AAR +M +  +AE +AR AM+IAADICVYTN  + 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARGMMDSDRNAEAVARDAMAIAADICVYTNGRLT 179

Query: 182 LETLKVGD 189
           +E++   D
Sbjct: 180 VESISQKD 187


>gi|68249095|ref|YP_248207.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           86-028NP]
 gi|81336499|sp|Q4QN50|HSLV_HAEI8 RecName: Full=ATP-dependent protease subunit HslV
 gi|68057294|gb|AAX87547.1| ATP-dependent protease HslV [Haemophilus influenzae 86-028NP]
          Length = 175

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T+ SA EI  K++ IA D+CV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAREIVEKSLKIAGDVCVFTNTNFTIEEL 173


>gi|298293774|ref|YP_003695713.1| 20S proteasome A and subunit betas [Starkeya novella DSM 506]
 gi|296930285|gb|ADH91094.1| 20S proteasome A and B subunits [Starkeya novella DSM 506]
          Length = 183

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 117/181 (64%), Positives = 143/181 (79%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            H    ++ TTI++VR    V I GDGQV+LG TVMKANARKVRRLGKG++I GFAG++A
Sbjct: 2   NHAPDTIYGTTIVSVRSGSRVAIGGDGQVTLGNTVMKANARKVRRLGKGDVIGGFAGATA 61

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ITLV+TG GD
Sbjct: 62  DAFTLFERLEAKLEQYPGQLQRAAVELAKDWRTDRYLRRLEAMMIVADKNITLVLTGTGD 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           VLEPENG+ AIGSGG +AL+AARAL  +    E I RK++ IAADIC+YTN  + +ET+ 
Sbjct: 122 VLEPENGITAIGSGGGFALAAARALADSGQDPEAIVRKSLGIAADICIYTNGQLTIETID 181

Query: 187 V 187
            
Sbjct: 182 A 182


>gi|289578440|ref|YP_003477067.1| 20S proteasome A and subunit betas [Thermoanaerobacter italicus
           Ab9]
 gi|297544716|ref|YP_003677018.1| 20S proteasome A and B subunits [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528153|gb|ADD02505.1| 20S proteasome A and B subunits [Thermoanaerobacter italicus Ab9]
 gi|296842491|gb|ADH61007.1| 20S proteasome A and B subunits [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 176

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 91/175 (52%), Positives = 125/175 (71%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              TTI+ VRK   V +AGDGQ++LG  T++K  A+K+RRL  G +I GFAGS ADA TL
Sbjct: 2   FKGTTIIAVRKGNKVSVAGDGQITLGENTILKHGAKKIRRLYNGEVIVGFAGSVADALTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ++ E+KLEQY   L R++VELA++WR DK LR LEA+++  DK  TL+I+G G+V+EP+
Sbjct: 62  SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAVDKKNTLLISGTGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             V+ IGSGG+Y   +A     +T    E+IA+KA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTNLDTEDIAKKALEIASKICVYTNNNITVETL 176


>gi|326796961|ref|YP_004314781.1| ATP-dependent protease hslV [Marinomonas mediterranea MMB-1]
 gi|326547725|gb|ADZ92945.1| ATP-dependent protease hslV [Marinomonas mediterranea MMB-1]
          Length = 183

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 110/174 (63%), Positives = 144/174 (82%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTILTVRK+  VV+ GDGQVSLG TVMK NARKVRRL KG +IAGFAG +ADAFTL ER 
Sbjct: 2   TTILTVRKENEVVVGGDGQVSLGNTVMKGNARKVRRLYKGEVIAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++V+LAKDWR DK LR LEAM+++A+K  TL+ITG GDV+EP++G +
Sbjct: 62  EGQLEKHQGHLVRAAVDLAKDWRSDKALRKLEAMLVVANKENTLIITGTGDVVEPQHGAL 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG+YA +AARAL+ +T  SA++I  K+++IAADICV+TNHN+ +ET+ + 
Sbjct: 122 AIGSGGNYAEAAARALIDNTDLSAKDIVEKSLNIAADICVFTNHNLTIETIAID 175


>gi|24215046|ref|NP_712527.1| ATP-dependent protease peptidase subunit [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45657472|ref|YP_001558.1| ATP-dependent protease peptidase subunit [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|47605706|sp|Q8F3Q4|HSLV_LEPIN RecName: Full=ATP-dependent protease subunit HslV
 gi|85542203|sp|Q72RY8|HSLV_LEPIC RecName: Full=ATP-dependent protease subunit HslV
 gi|24196096|gb|AAN49545.1| ATP-dependent protease peptidase subunit [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45600711|gb|AAS70195.1| ATP-dependent HslUV protease peptidase subunit [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 180

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 101/175 (57%), Positives = 136/175 (77%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TTIL VRK+G V I GDGQVS+G TVMK  A+K+RRL  G I++GFAGS+ADAFTL
Sbjct: 5   KIRSTTILCVRKNGKVAIGGDGQVSMGNTVMKNTAKKIRRLYDGKILSGFAGSAADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  EKK++++   L RS+VELA++WR D+ LR LEA++++ADK  + +I+G GDV+ P+
Sbjct: 65  FELFEKKVQEFGGSLSRSAVELAREWRTDRMLRRLEALLIVADKEESFLISGTGDVISPD 124

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            GV+AIGSGG+YAL+AARAL   T  S +EI   +M IAADIC+YTN++I LE +
Sbjct: 125 EGVIAIGSGGNYALAAARALYDHTNLSPKEIVESSMKIAADICIYTNNHITLEEI 179


>gi|299822640|ref|ZP_07054526.1| ATP-dependent protease HslVU [Listeria grayi DSM 20601]
 gi|299816169|gb|EFI83407.1| ATP-dependent protease HslVU [Listeria grayi DSM 20601]
          Length = 179

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 98/179 (54%), Positives = 132/179 (73%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++HATTI  V+ +G   +AGDGQV+LG   VMK  A+KVR+L  GN+IAGFAGS ADAF
Sbjct: 1   MELHATTIFAVQHNGKAAMAGDGQVTLGESVVMKHTAKKVRKLFNGNVIAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KL +Y   L R+SVELAK WR D  LR LEAM+++ DK   L+++G G+V+E
Sbjct: 61  TLFEKFENKLNEYNGNLERASVELAKQWRSDNVLRKLEAMLIVMDKEKLLLVSGTGEVIE 120

Query: 130 PENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G++AIGSGG+YAL+A RAL         A+EIAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRYSSEVIEAKEIARNALQIASEICVFTNDHITVEEL 179


>gi|126176058|ref|YP_001052207.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS155]
 gi|160873587|ref|YP_001552903.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS195]
 gi|217971679|ref|YP_002356430.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS223]
 gi|304411508|ref|ZP_07393121.1| 20S proteasome A and B subunits [Shewanella baltica OS183]
 gi|307306716|ref|ZP_07586458.1| 20S proteasome A and B subunits [Shewanella baltica BA175]
 gi|166222998|sp|A3D9C5|HSLV_SHEB5 RecName: Full=ATP-dependent protease subunit HslV
 gi|189036237|sp|A9KYP9|HSLV_SHEB9 RecName: Full=ATP-dependent protease subunit HslV
 gi|254802423|sp|B8E6E4|HSLV_SHEB2 RecName: Full=ATP-dependent protease subunit HslV
 gi|125999263|gb|ABN63338.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Shewanella baltica OS155]
 gi|160859109|gb|ABX47643.1| 20S proteasome A and B subunits [Shewanella baltica OS195]
 gi|217496814|gb|ACK45007.1| 20S proteasome A and B subunits [Shewanella baltica OS223]
 gi|304350035|gb|EFM14440.1| 20S proteasome A and B subunits [Shewanella baltica OS183]
 gi|306910684|gb|EFN41113.1| 20S proteasome A and B subunits [Shewanella baltica BA175]
 gi|315265815|gb|ADT92668.1| 20S proteasome A and B subunits [Shewanella baltica OS678]
          Length = 174

 Score =  175 bits (444), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NA+KVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   LLRS+VELAKDWR D+ LR LEA++++AD   +L+ITG GDV++PE+ ++
Sbjct: 62  EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEALLVVADAETSLIITGNGDVVQPEHDLV 121

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG+Y   +A   L +T+ SA EIA K+++IAADICV+TN    +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAADICVFTNQFKTIEEL 172


>gi|186474841|ref|YP_001856311.1| ATP-dependent protease peptidase subunit [Burkholderia phymatum
           STM815]
 gi|238065843|sp|B2JJX8|HSLV_BURP8 RecName: Full=ATP-dependent protease subunit HslV
 gi|184191300|gb|ACC69265.1| 20S proteasome A and B subunits [Burkholderia phymatum STM815]
          Length = 178

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  A+KVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNNKVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AA+AL  +T  S  EI  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTDLSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|317401424|gb|EFV82057.1| ATP-dependent protease hslV [Achromobacter xylosoxidans C54]
          Length = 179

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 95/175 (54%), Positives = 130/175 (74%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + HATTI+ VR+   V + GDGQV+LG  V+K  ARK+RRL    I+AGFAG++ADAFTL
Sbjct: 3   QFHATTIVCVRRGNRVALGGDGQVTLGNIVIKGTARKIRRLYHDKILAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+R++VEL +DWR D+ LR LEAM+++AD   TLV+TG GDVLEPE
Sbjct: 63  QERFEAKLEKHQGNLMRAAVELTRDWRTDRVLRRLEAMLIVADAEHTLVLTGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG+Y   +A   L +T+ + E I ++++ IA D+C+YTN N V+ETL
Sbjct: 123 HGLAAIGSGGAYAQSAALALLRNTELAPETIVKQSLEIAGDLCIYTNQNHVIETL 177


>gi|258544136|ref|ZP_05704370.1| ATP-dependent protease HslV [Cardiobacterium hominis ATCC 15826]
 gi|258520644|gb|EEV89503.1| ATP-dependent protease HslV [Cardiobacterium hominis ATCC 15826]
          Length = 179

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 113/174 (64%), Positives = 140/174 (80%), Gaps = 1/174 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H+TTIL+VR+   V IAGDGQVSLG T+MK NARK+RRL K  I+AGFAG +ADAFTL E
Sbjct: 5   HSTTILSVRRGRHVAIAGDGQVSLGNTIMKGNARKIRRLYKNRILAGFAGGTADAFTLFE 64

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R E KLE+   QLLR++VELAKDWR D+ LR LEAM+++AD+T TL+++G GDV+EPE+ 
Sbjct: 65  RFEGKLEEQDGQLLRAAVELAKDWRTDRMLRRLEAMLIVADETSTLILSGNGDVVEPEDS 124

Query: 134 VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + AIGSGG YALSAARAL   T+  A  IARK++ IA+DICVYTNHNI+ + LK
Sbjct: 125 IAAIGSGGMYALSAARALYHNTEMDALTIARKSLEIASDICVYTNHNIITDELK 178


>gi|212633357|ref|YP_002309882.1| ATP-dependent protease peptidase subunit [Shewanella piezotolerans
           WP3]
 gi|226704547|sp|B8CI19|HSLV_SHEPW RecName: Full=ATP-dependent protease subunit HslV
 gi|212554841|gb|ACJ27295.1| 20S proteasome, A and B subunits [Shewanella piezotolerans WP3]
          Length = 174

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 104/172 (60%), Positives = 135/172 (78%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L+R++VE+AKDWR DK LR LEA++ +AD   +L+ITG GDV++PEN ++
Sbjct: 62  EAKLEMHQGHLMRAAVEMAKDWRSDKVLRKLEALLAVADGEASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG++A SAA AL+ +T+ SA EIA K+++IA DICV+TN    +E LK
Sbjct: 122 AIGSGGNFAQSAATALLENTELSALEIAEKSLTIAGDICVFTNQFKTIEELK 173


>gi|328954141|ref|YP_004371475.1| ATP-dependent protease hslV [Desulfobacca acetoxidans DSM 11109]
 gi|328454465|gb|AEB10294.1| ATP-dependent protease hslV [Desulfobacca acetoxidans DSM 11109]
          Length = 183

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 100/174 (57%), Positives = 131/174 (75%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL VR+DG V +AGDGQV+L  TVMK  ARKVR++  G II GFAG++ADA +LL
Sbjct: 10  FRGTTILAVRRDGKVAVAGDGQVTLNNTVMKHRARKVRKIYNGKIIVGFAGATADALSLL 69

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E KLE++   L R+ VELAKDWR DK LR LEA++L+ D+    +++G GDV+EP++
Sbjct: 70  ERFESKLEKHQGNLTRAVVELAKDWRTDKILRRLEALLLVVDRDNFFLLSGSGDVIEPDD 129

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            VMAIGSGG+YA +AA+AL+  T  SAEEI R+AM IAA +C++TN+ + LE L
Sbjct: 130 EVMAIGSGGAYAQAAAQALVQHTTMSAEEICREAMQIAAGLCIFTNNQLTLEEL 183


>gi|312621562|ref|YP_004023175.1| 20S proteasome subunits A and B [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202029|gb|ADQ45356.1| 20S proteasome A and B subunits [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 176

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 129/175 (73%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V IAGDGQV+     +MK+ A+KVR+L  G ++ GFAGS ADA TL
Sbjct: 2   FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGKVLVGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+KLEQ    L +S VELAK+WR DK LR LEA++++ADK    V++G G+V+EP+
Sbjct: 62  CEKFEEKLEQNSGNLQKSVVELAKEWRQDKILRRLEALMVVADKDHLFVVSGSGEVVEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + + AIGSGG YAL+AARAL+ ST  SA EIARKA+ IAA ICVYTN+NI +  L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQSTDLSAAEIARKALEIAASICVYTNNNITVLEL 176


>gi|163742595|ref|ZP_02149981.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
           2.10]
 gi|161384180|gb|EDQ08563.1| ATP-dependent protease peptidase subunit [Phaeobacter gallaeciensis
           2.10]
          Length = 188

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 117/189 (61%), Positives = 147/189 (77%), Gaps = 3/189 (1%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAG 60
           +M D  +    H TTI+ V+K G VVIAGDGQVSLGQTV+K +ARKVRRL  G  +++AG
Sbjct: 1   MMADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGSARKVRRLSPGGFDVVAG 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D     V
Sbjct: 60  FAGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGADMFV 119

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
           ITG+GDVLEPE+ V AIGSGG++AL+AAR +M ++ +AE +AR AM+IAADICVYTN  +
Sbjct: 120 ITGVGDVLEPEHDVAAIGSGGNFALAAARGMMDSERNAEAVARDAMAIAADICVYTNGRL 179

Query: 181 VLETLKVGD 189
            +E++   D
Sbjct: 180 TVESISQKD 188


>gi|161526255|ref|YP_001581267.1| ATP-dependent protease peptidase subunit [Burkholderia multivorans
           ATCC 17616]
 gi|189349031|ref|YP_001944659.1| ATP-dependent protease peptidase subunit [Burkholderia multivorans
           ATCC 17616]
 gi|221201906|ref|ZP_03574943.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia multivorans CGD2M]
 gi|221207588|ref|ZP_03580596.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia multivorans CGD2]
 gi|221215813|ref|ZP_03588772.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia multivorans CGD1]
 gi|238065816|sp|A9AC32|HSLV_BURM1 RecName: Full=ATP-dependent protease subunit HslV
 gi|160343684|gb|ABX16770.1| 20S proteasome A and B subunits [Burkholderia multivorans ATCC
           17616]
 gi|189333053|dbj|BAG42123.1| ATP-dependent HslUV protease subunit HslV [Burkholderia multivorans
           ATCC 17616]
 gi|221164349|gb|EED96836.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia multivorans CGD1]
 gi|221172434|gb|EEE04873.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia multivorans CGD2]
 gi|221178326|gb|EEE10736.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia multivorans CGD2M]
          Length = 178

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD   TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADANTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T+ S  EI  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|86136741|ref|ZP_01055319.1| ATP-dependent protease peptidase subunit [Roseobacter sp. MED193]
 gi|85826065|gb|EAQ46262.1| ATP-dependent protease peptidase subunit [Roseobacter sp. MED193]
          Length = 204

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 119/191 (62%), Positives = 143/191 (74%), Gaps = 3/191 (1%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIA 59
           V M D  +    H TTI+ V+K G VVIAGDGQVSLGQTV+K  ARKVRRL  G  ++I 
Sbjct: 7   VKMADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGFDVIV 65

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
           GFAGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D T  L
Sbjct: 66  GFAGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVTDGTELL 125

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
           VITG GDVLEPE+ V AIGSGG++AL+AAR +M +   AE +AR AM+IAADICVYTN  
Sbjct: 126 VITGAGDVLEPEHNVAAIGSGGNFALAAARGMMDSDRDAEAVARDAMAIAADICVYTNGR 185

Query: 180 IVLETLKVGDE 190
           + +E +    +
Sbjct: 186 LTVERIAADGD 196


>gi|120609504|ref|YP_969182.1| ATP-dependent protease peptidase subunit [Acidovorax citrulli
           AAC00-1]
 gi|120587968|gb|ABM31408.1| HslV component of HslUV peptidase [Acidovorax citrulli AAC00-1]
          Length = 194

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 101/180 (56%), Positives = 137/180 (76%), Gaps = 6/180 (3%)

Query: 12  KMHATTILTVRKD--GV---VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           + H TTIL+VR+        V I GDGQV+LG  V+K +ARKVR+L  G ++AGFAG++A
Sbjct: 15  QFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKLHHGKVLAGFAGATA 74

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ER E KLE++   L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GD
Sbjct: 75  DAFTLFERFEGKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGD 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE G++AIGSGG+YA SAA+AL+  T+ SAEEI RK+++IA ++C+YTN +  +ETL
Sbjct: 135 VLEPEQGIVAIGSGGAYAHSAAKALLNHTELSAEEIVRKSLAIAGELCIYTNMHHTVETL 194


>gi|238028911|ref|YP_002913142.1| ATP-dependent protease peptidase subunit [Burkholderia glumae BGR1]
 gi|237878105|gb|ACR30438.1| 20S proteasome, A and B subunits [Burkholderia glumae BGR1]
          Length = 178

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 103/176 (58%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QYHGTTIVSVRRGDQVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ ADKT TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADKTTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA +AARAL  +T+ S +EI  KA++IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTELSPQEIVAKALTIAGDMCIYTNHNHIIETIE 178


>gi|222530145|ref|YP_002574027.1| ATP-dependent protease peptidase subunit [Caldicellulosiruptor
           bescii DSM 6725]
 gi|254802327|sp|B9MM31|HSLV_ANATD RecName: Full=ATP-dependent protease subunit HslV
 gi|222456992|gb|ACM61254.1| 20S proteasome A and B subunits [Caldicellulosiruptor bescii DSM
           6725]
          Length = 176

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 129/175 (73%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V IAGDGQV+     +MK+ A+KVR+L  G ++ GFAGS ADA TL
Sbjct: 2   FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGKVLVGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+KLEQ    L +S VELAK+WR DK LR LEA++++ADK    V++G G+V+EP+
Sbjct: 62  CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKDHLFVVSGSGEVVEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + + AIGSGG YAL+AARAL+ ST  SA EIARKA+ IAA ICVYTN+NI +  L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQSTDLSAAEIARKALEIAASICVYTNNNITVLEL 176


>gi|221133924|ref|ZP_03560229.1| ATP-dependent protease peptidase subunit [Glaciecola sp. HTCC2999]
          Length = 174

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 135/172 (78%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VV+AGDGQVSLG TVMK NA+KVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGNQVVMAGDGQVSLGNTVMKGNAKKVRRLYHDKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L R++VELAKDWR D+ LR LEA++ +AD T +LVITG GDV++PE  ++
Sbjct: 62  ESKLEMHQGHLTRAAVELAKDWRTDRMLRKLEALLAVADHTASLVITGNGDVIQPEKDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG +A SAA AL+ +TQ SA++IA K+++IA DICVYTNH+  +ETL 
Sbjct: 122 AIGSGGPFAQSAATALLDNTQLSAQDIATKSLTIAGDICVYTNHSQTVETLD 173


>gi|50123181|ref|YP_052348.1| ATP-dependent protease peptidase subunit [Pectobacterium
           atrosepticum SCRI1043]
 gi|85542202|sp|Q6CZ92|HSLV_ERWCT RecName: Full=ATP-dependent protease subunit HslV
 gi|49613707|emb|CAG77158.1| ATP-dependent protease (heat shock protein) [Pectobacterium
           atrosepticum SCRI1043]
          Length = 176

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYHDRVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+  A +I  K++ IA DIC+YTN    +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNQFHTIEEL 172


>gi|145636238|ref|ZP_01791907.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittHH]
 gi|148825227|ref|YP_001289980.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittEE]
 gi|229846581|ref|ZP_04466689.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           7P49H1]
 gi|166222978|sp|A5U9Z6|HSLV_HAEIE RecName: Full=ATP-dependent protease subunit HslV
 gi|145270403|gb|EDK10337.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittHH]
 gi|148715387|gb|ABQ97597.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittEE]
 gi|229810674|gb|EEP46392.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           7P49H1]
 gi|309972351|gb|ADO95552.1| Protease HslVU, peptidase subunit [Haemophilus influenzae R2846]
          Length = 175

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 106/172 (61%), Positives = 138/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T+ SA EI  K++ IA DICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 173


>gi|329122376|ref|ZP_08250963.1| ATP-dependent protease HslV [Haemophilus aegyptius ATCC 11116]
 gi|327473658|gb|EGF19077.1| ATP-dependent protease HslV [Haemophilus aegyptius ATCC 11116]
          Length = 175

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 137/172 (79%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++V ++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVHRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL  +T+ SA EI  K++ IA DICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALAENTELSAREIVEKSLKIAGDICVFTNTNFTIEEL 173


>gi|16272440|ref|NP_438654.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae Rd
           KW20]
 gi|145628876|ref|ZP_01784676.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           22.1-21]
 gi|145638589|ref|ZP_01794198.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittII]
 gi|260580441|ref|ZP_05848269.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           RdAW]
 gi|260582239|ref|ZP_05850032.1| heat shock protein [Haemophilus influenzae NT127]
 gi|1170387|sp|P43772|HSLV_HAEIN RecName: Full=ATP-dependent protease subunit HslV
 gi|1573473|gb|AAC22153.1| heat shock protein (hslV) [Haemophilus influenzae Rd KW20]
 gi|144979346|gb|EDJ89032.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           22.1-21]
 gi|145272184|gb|EDK12092.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           PittII]
 gi|260092783|gb|EEW76718.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           RdAW]
 gi|260094607|gb|EEW78502.1| heat shock protein [Haemophilus influenzae NT127]
 gi|301169213|emb|CBW28810.1| peptidase component of the HslUV protease [Haemophilus influenzae
           10810]
 gi|309750091|gb|ADO80075.1| Protease HslVU, peptidase subunit [Haemophilus influenzae R2866]
          Length = 175

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 106/172 (61%), Positives = 139/172 (80%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T+ SA EI  K++ IA DICV+TN N  +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAHEIVEKSLRIAGDICVFTNTNFTIEEL 173


>gi|323705452|ref|ZP_08117027.1| 20S proteasome, A and B subunits [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535354|gb|EGB25130.1| 20S proteasome, A and B subunits [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 176

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 92/175 (52%), Positives = 128/175 (73%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              TTI+ VR+   V IAGDGQV+ G  T++K  A+K+RRL    ++ GFAGS ADAFTL
Sbjct: 2   FKGTTIVAVRRGNKVSIAGDGQVTFGENTILKHGAKKIRRLYNDEVLVGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E+KLEQY   L R++VELA++WR DK L+ LEA+++ ADK +TLVI+G G+V+EP+
Sbjct: 62  SEMFEEKLEQYSGNLKRAAVELAQEWRKDKILKKLEALLIAADKNVTLVISGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYAL-SAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           N V+AIGSGG++A+ +A     +T    +EIARK++ IA+ ICVYTN +I +E+L
Sbjct: 122 NDVIAIGSGGNFAMSAALALRYNTDLPVDEIARKSLEIASQICVYTNDHITVESL 176


>gi|260772032|ref|ZP_05880949.1| ATP-dependent protease HslV [Vibrio metschnikovii CIP 69.14]
 gi|260612899|gb|EEX38101.1| ATP-dependent protease HslV [Vibrio metschnikovii CIP 69.14]
          Length = 184

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 103/173 (59%), Positives = 138/173 (79%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+D  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRDNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ESKLQMHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETTSLIITGNGDVVQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG+YA +AA AL+ +TQ  A EIA KA++IA +ICV+TNH+  +E L++
Sbjct: 122 AIGSGGNYAQAAALALLENTQLDAREIAEKALNIAGNICVFTNHHHTIEELEI 174


>gi|152998124|ref|YP_001342959.1| ATP-dependent protease peptidase subunit [Marinomonas sp. MWYL1]
 gi|189028452|sp|A6W2U5|HSLV_MARMS RecName: Full=ATP-dependent protease subunit HslV
 gi|150839048|gb|ABR73024.1| 20S proteasome A and B subunits [Marinomonas sp. MWYL1]
          Length = 183

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 105/174 (60%), Positives = 142/174 (81%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTILTVRK   VV+ GDGQVSLG TVMK NARKVRRL +G +IAGFAG +ADAFTL ER 
Sbjct: 2   TTILTVRKGNQVVVGGDGQVSLGNTVMKGNARKVRRLYRGEVIAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++V+LAKDWR D+ LR LEAM+++A+K  TL+ITG GDV+EP++G +
Sbjct: 62  EGQLEKHQGHLVRAAVDLAKDWRSDRALRKLEAMLIVANKESTLIITGTGDVVEPQHGAL 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AARAL+ +T  +A+EI  K+++IAADICV+TNH++ +E + + 
Sbjct: 122 AIGSGGNFAEAAARALIDNTDLTAKEIVEKSLNIAADICVFTNHSLTIEEITID 175


>gi|312126813|ref|YP_003991687.1| 20S proteasome subunits A and B [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776832|gb|ADQ06318.1| 20S proteasome A and B subunits [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 176

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 99/175 (56%), Positives = 129/175 (73%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V IAGDGQV+     +MK+ A+KVR+L  G ++ GFAGS ADA TL
Sbjct: 2   FHATTIVAVKKGESVAIAGDGQVTFSQNMIMKSTAKKVRKLYNGRVLVGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+KLEQ    L +S VELAK+WR DK LR LEA++++ADK    V++G G+V+EP+
Sbjct: 62  CEKFEEKLEQNSGNLQKSVVELAKEWRQDKVLRRLEALMVVADKEHLFVVSGSGEVVEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + + AIGSGG YAL+AARAL+ ST  SA EIA+KA+ IAA ICVYTN+NI +  L
Sbjct: 122 DNIAAIGSGGPYALAAARALLQSTDLSAAEIAKKALEIAASICVYTNNNITVLEL 176


>gi|206558902|ref|YP_002229662.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
           J2315]
 gi|238065815|sp|B4E7Z2|HSLV_BURCJ RecName: Full=ATP-dependent protease subunit HslV
 gi|198034939|emb|CAR50811.1| ATP-dependent protease HslV [Burkholderia cenocepacia J2315]
          Length = 178

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL+ +T  S  EI  K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTDLSPREIVEKSLGIAGDMCIYTNHNRIIETIE 178


>gi|73667417|ref|YP_303433.1| ATP-dependent protease peptidase subunit [Ehrlichia canis str.
           Jake]
 gi|123614688|sp|Q3YR20|HSLV_EHRCJ RecName: Full=ATP-dependent protease subunit HslV
 gi|72394558|gb|AAZ68835.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Ehrlichia canis str. Jake]
          Length = 189

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 109/188 (57%), Positives = 146/188 (77%), Gaps = 6/188 (3%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +     +M+ TTIL +R+   V+IAGDGQVSLGQTV+K +A+K++RL    +I GFAG+
Sbjct: 1   MEHKDPSQMYGTTILCIRRGNQVIIAGDGQVSLGQTVIKNSAKKIKRLANDTVITGFAGA 60

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KLE++P QLLR+ VELAKDWRMDKYLR LEAM+++ADK+I+L+I+G 
Sbjct: 61  TADAFTLFERLESKLEKHPGQLLRACVELAKDWRMDKYLRRLEAMMIVADKSISLIISGN 120

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAADICVYTNH 178
           GDVLEPENG+ AIGSGG+YAL+AA+AL  T        + E     AM IA++IC+YTN+
Sbjct: 121 GDVLEPENGIAAIGSGGNYALAAAKALCETNERFSQNMTLEYTITTAMRIASEICIYTNN 180

Query: 179 NIVLETLK 186
           NI++E ++
Sbjct: 181 NIIIEKIE 188


>gi|238760314|ref|ZP_04621456.1| ATP-dependent protease hslV [Yersinia aldovae ATCC 35236]
 gi|238701442|gb|EEP94017.1| ATP-dependent protease hslV [Yersinia aldovae ATCC 35236]
          Length = 176

 Score =  175 bits (443), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 101/172 (58%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NARKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNARKVRRLYNNKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAARAL+ +T   A++I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAARALLENTDLGAKDIVEKSLSIAGDICIYTNRTQTIEELT 173


>gi|241765139|ref|ZP_04763127.1| 20S proteasome A and B subunits [Acidovorax delafieldii 2AN]
 gi|241365218|gb|EER60065.1| 20S proteasome A and B subunits [Acidovorax delafieldii 2AN]
          Length = 189

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 101/189 (53%), Positives = 137/189 (72%), Gaps = 5/189 (2%)

Query: 2   VVMGDKHYAVKMHATTILTVRKD--GVV--VIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
           + M         H TTIL+VR+   G V   I GDGQV+LG  V+K  ARKVR+L  G +
Sbjct: 1   MAMDSSSQTPVFHGTTILSVRRQTPGGVQVAIGGDGQVTLGNIVVKGTARKVRKLYHGKV 60

Query: 58  IAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI 117
           +AGFAG++ADAFTL ER E KLE++   L R+++EL KDWR D+ LR LEAM+ +AD + 
Sbjct: 61  LAGFAGATADAFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASA 120

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYT 176
           +L+ITG GDVLEPE G++AIGSGG+YA SAA+AL+ +T  SA+EI +K++ IA ++C+YT
Sbjct: 121 SLIITGNGDVLEPEQGIVAIGSGGAYAHSAAKALLVNTDLSAQEIVKKSLEIAGELCIYT 180

Query: 177 NHNIVLETL 185
           N +  +ETL
Sbjct: 181 NMSHTIETL 189


>gi|167625771|ref|YP_001676065.1| ATP-dependent protease peptidase subunit [Shewanella halifaxensis
           HAW-EB4]
 gi|189036238|sp|B0TVV3|HSLV_SHEHH RecName: Full=ATP-dependent protease subunit HslV
 gi|167355793|gb|ABZ78406.1| 20S proteasome A and B subunits [Shewanella halifaxensis HAW-EB4]
          Length = 174

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 104/172 (60%), Positives = 134/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L+R++VE+AKDWR DK LR LEA++ +AD   +L+ITG GDV++PEN ++
Sbjct: 62  EAKLEMHQGHLMRAAVEMAKDWRSDKVLRKLEALLAVADAESSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG++A SAA AL+ +T  SA EIA K+++IA DICV+TN    +E LK
Sbjct: 122 AIGSGGAFAQSAATALLENTDLSALEIAEKSLTIAGDICVFTNQFKTIEELK 173


>gi|227113219|ref|ZP_03826875.1| ATP-dependent protease peptidase subunit [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|227327578|ref|ZP_03831602.1| ATP-dependent protease peptidase subunit [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
 gi|253686573|ref|YP_003015763.1| 20S proteasome A and B subunits [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259491394|sp|C6DHM7|HSLV_PECCP RecName: Full=ATP-dependent protease subunit HslV
 gi|251753151|gb|ACT11227.1| 20S proteasome A and B subunits [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 176

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYHDRVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+  A +I  K++ IA DIC+YTN    +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNQFHTIEEL 172


>gi|42520986|ref|NP_966901.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58696798|ref|ZP_00372329.1| heat shock protein HslV [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58698622|ref|ZP_00373518.1| protease HslVU, subunit HslV [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|99036089|ref|ZP_01315123.1| hypothetical protein Wendoof_01000042 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|225630855|ref|YP_002727646.1| ATP-dependent protease, peptidase subunit [Wolbachia sp. wRi]
 gi|47605598|sp|P61479|HSLV_WOLPM RecName: Full=ATP-dependent protease subunit HslV
 gi|254765623|sp|C0R4L3|HSLV_WOLWR RecName: Full=ATP-dependent protease subunit HslV
 gi|42410727|gb|AAS14835.1| heat shock protein HslV [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|58534867|gb|EAL58970.1| protease HslVU, subunit HslV [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58537007|gb|EAL60155.1| heat shock protein HslV [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225592836|gb|ACN95855.1| ATP-dependent protease, peptidase subunit [Wolbachia sp. wRi]
          Length = 184

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 122/181 (67%), Positives = 153/181 (84%), Gaps = 1/181 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H   KM+ TTIL++RKD  VV+ GDGQVSLG TV+K+ A+KVRRL   ++IAGFAG++A
Sbjct: 3   QHDNNKMYGTTILSIRKDKSVVVIGDGQVSLGHTVIKSGAKKVRRLSGDSVIAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GD
Sbjct: 63  DAFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE+GV AIGSGG++ALSAARAL+     S EEIA+KAM IA DICVYTNHN+V+E +
Sbjct: 123 VLEPEDGVAAIGSGGNFALSAARALIDIKGISIEEIAKKAMKIAGDICVYTNHNVVIEKI 182

Query: 186 K 186
           +
Sbjct: 183 E 183


>gi|163750992|ref|ZP_02158224.1| ATP-dependent protease peptidase subunit [Shewanella benthica KT99]
 gi|161329282|gb|EDQ00280.1| ATP-dependent protease peptidase subunit [Shewanella benthica KT99]
          Length = 174

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L++++VE+AKDWR DK LR LEA++ +AD   +L+ITG GDV++PEN ++
Sbjct: 62  EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADSECSLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG +A SAA AL+ +T+ +A EIA+K+++IA DICV+TN    +E L
Sbjct: 122 AIGSGGPFAQSAATALLENTELTATEIAQKSLTIAGDICVFTNQFKTIEEL 172


>gi|53717846|ref|YP_106832.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           K96243]
 gi|53724453|ref|YP_104728.1| ATP-dependent protease peptidase subunit [Burkholderia mallei ATCC
           23344]
 gi|167001362|ref|ZP_02267161.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           mallei PRL-20]
 gi|167717565|ref|ZP_02400801.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           DM98]
 gi|167736608|ref|ZP_02409382.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           14]
 gi|167813706|ref|ZP_02445386.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           91]
 gi|167822221|ref|ZP_02453692.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           9]
 gi|167843816|ref|ZP_02469324.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           B7210]
 gi|167892314|ref|ZP_02479716.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           7894]
 gi|167900811|ref|ZP_02488016.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           NCTC 13177]
 gi|167909031|ref|ZP_02496122.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           112]
 gi|167917070|ref|ZP_02504161.1| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           BCC215]
 gi|226830782|ref|YP_001064484.2| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           1106a]
 gi|228969303|ref|YP_331800.2| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           1710b]
 gi|228993244|ref|YP_001057244.2| ATP-dependent protease peptidase subunit [Burkholderia pseudomallei
           668]
 gi|229008325|ref|YP_994210.2| ATP-dependent protease peptidase subunit [Burkholderia mallei
           SAVP1]
 gi|229027668|ref|YP_001082948.2| ATP-dependent protease peptidase subunit [Burkholderia mallei NCTC
           10247]
 gi|229780996|ref|YP_001028137.2| ATP-dependent protease peptidase subunit [Burkholderia mallei NCTC
           10229]
 gi|242314355|ref|ZP_04813371.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           pseudomallei 1106b]
 gi|254196175|ref|ZP_04902599.1| protease HslVU, subunit HslV [Burkholderia pseudomallei S13]
 gi|254258080|ref|ZP_04949134.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           pseudomallei 1710a]
 gi|254295747|ref|ZP_04963204.1| protease HslVU, subunit HslV [Burkholderia pseudomallei 406e]
 gi|254359663|ref|ZP_04975934.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia mallei 2002721280]
 gi|85542199|sp|Q62EZ9|HSLV_BURMA RecName: Full=ATP-dependent protease subunit HslV
 gi|85542200|sp|Q63YI3|HSLV_BURPS RecName: Full=ATP-dependent protease subunit HslV
 gi|229486312|sp|A3NQ63|HSLV_BURP0 RecName: Full=ATP-dependent protease subunit HslV
 gi|52208260|emb|CAH34191.1| ATP-dependent Hsl protease [Burkholderia pseudomallei K96243]
 gi|52427876|gb|AAU48469.1| protease HslVU, subunit HslV [Burkholderia mallei ATCC 23344]
 gi|148028877|gb|EDK86809.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia mallei 2002721280]
 gi|157806143|gb|EDO83313.1| protease HslVU, subunit HslV [Burkholderia pseudomallei 406e]
 gi|169652918|gb|EDS85611.1| protease HslVU, subunit HslV [Burkholderia pseudomallei S13]
 gi|210148305|gb|ABN89094.2| shock protein HslVU, ATP-dependent protease subunit HslV
           [Burkholderia pseudomallei 1106a]
 gi|242137594|gb|EES23996.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           pseudomallei 1106b]
 gi|243062874|gb|EES45060.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           mallei PRL-20]
 gi|254216769|gb|EET06153.1| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           pseudomallei 1710a]
 gi|283775070|gb|ABN81994.2| ATP-dependent protease HslVU, peptidase subunit [Burkholderia
           pseudomallei 668]
          Length = 178

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 103/176 (58%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTILSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRLLRRLEAMLIAADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA +AARAL  +T  S  EI  KA+ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTDLSPREIVEKALGIAGDMCIYTNHNRIIETIE 178


>gi|320105388|ref|YP_004180978.1| 20S proteasome subunits A/B [Terriglobus saanensis SP1PR4]
 gi|319923909|gb|ADV80984.1| 20S proteasome A and B subunits [Terriglobus saanensis SP1PR4]
          Length = 219

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 92/183 (50%), Positives = 131/183 (71%), Gaps = 7/183 (3%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ +TT++ VR++G VV+A DGQV+LG  VMK  A+K+RRL +  ++AGFAGS+ADAF+L
Sbjct: 37  RIRSTTVICVRRNGHVVMAADGQVTLGSAVMKHGAKKIRRLYQDKVLAGFAGSTADAFSL 96

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
             R E KLEQ+   L R++VELAKDWR DK LR LEA++++AD     +++G GDV+EP+
Sbjct: 97  FARFESKLEQFAGNLSRAAVELAKDWRTDKMLRQLEALLIVADVNQVYLLSGNGDVIEPD 156

Query: 132 ------NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
                   V  IGSGGS+A +AA ALM +T  +A +IA K+M IA +IC+YTN ++ +E 
Sbjct: 157 AIAGGVGVVATIGSGGSFAQAAAYALMENTDLTARQIAEKSMKIAGEICIYTNDSVTIEE 216

Query: 185 LKV 187
           L  
Sbjct: 217 LGT 219


>gi|134297265|ref|YP_001121000.1| ATP-dependent protease peptidase subunit [Burkholderia
           vietnamiensis G4]
 gi|166221630|sp|A4JIR2|HSLV_BURVG RecName: Full=ATP-dependent protease subunit HslV
 gi|134140422|gb|ABO56165.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Burkholderia vietnamiensis G4]
          Length = 178

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 132/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T  S  EI  K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTDMSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178


>gi|83313635|ref|YP_423899.1| ATP-dependent protease peptidase subunit [Magnetospirillum
           magneticum AMB-1]
 gi|123540234|sp|Q2VYI5|HSLV_MAGSA RecName: Full=ATP-dependent protease subunit HslV
 gi|82948476|dbj|BAE53340.1| ATP-dependent protease HslVU, peptidase subunit [Magnetospirillum
           magneticum AMB-1]
          Length = 182

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 120/183 (65%), Positives = 149/183 (81%), Gaps = 2/183 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +       H TTIL +RKDG VVIAGDGQVSLG TV+K NARKVR++G G+I+ GFAG
Sbjct: 1   MSESSLP-SWHGTTILCLRKDGRVVIAGDGQVSLGATVIKGNARKVRKVGGGSILVGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTLLERLE KLE++P QL R+ VELAKDWR D+YLR LEAM+ +ADK ++LV+TG
Sbjct: 60  ATADAFTLLERLEAKLEKHPGQLTRACVELAKDWRTDRYLRRLEAMMAVADKDVSLVLTG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVL 182
            GDVLEPE+G++ IGSGG+YAL+AARAL+      AE IARKAM+IAA ICVYTN N+++
Sbjct: 120 QGDVLEPEDGIIGIGSGGNYALAAARALIDIDGLDAETIARKAMAIAAGICVYTNGNMIV 179

Query: 183 ETL 185
           E+L
Sbjct: 180 ESL 182


>gi|87122851|ref|ZP_01078721.1| heat shock protein HslV [Marinomonas sp. MED121]
 gi|86161862|gb|EAQ63157.1| heat shock protein HslV [Marinomonas sp. MED121]
          Length = 185

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 106/174 (60%), Positives = 139/174 (79%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTILTVRK   VV+ GDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTILTVRKGNQVVVGGDGQVSLGNTVMKGNARKVRRLYHNEVVAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE+Y   L+R++VELAKDWR DK LR LEAM+++A+K  TL+ITG GDV+EPE+G +
Sbjct: 62  EGQLEKYQGDLVRAAVELAKDWRSDKALRKLEAMLIVANKQSTLIITGNGDVVEPEHGAL 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG+YA ++ARAL+ +T   A++I  K++ IAADICV+TNH++ +E++ + 
Sbjct: 122 AIGSGGNYAEASARALIDNTDLKAQDIVEKSLKIAADICVFTNHSLTVESITID 175


>gi|144898076|emb|CAM74940.1| ATP-dependent protease [Magnetospirillum gryphiswaldense MSR-1]
          Length = 181

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 119/180 (66%), Positives = 150/180 (83%), Gaps = 1/180 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSS 65
                  H TTIL+VRK+G VVIAGDGQVSLGQTV+KANARKVRR+G   +I+ GFAG++
Sbjct: 2   SENLPSWHGTTILSVRKNGRVVIAGDGQVSLGQTVIKANARKVRRIGANNDILVGFAGAT 61

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAFTLLERLE KLE++P QL R+ VELAKDWR D+YLR LEAM+ +ADK ++LV+TG G
Sbjct: 62  ADAFTLLERLEGKLEKHPGQLTRACVELAKDWRTDRYLRRLEAMMAVADKEVSLVLTGQG 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           DVLEP +G++ IGSGG+YAL+AARAL+  +  AEEI RK+M++AADICVYTN N+++E+L
Sbjct: 122 DVLEPSDGIIGIGSGGNYALAAARALIDMEVDAEEIVRKSMAVAADICVYTNSNVIIESL 181


>gi|78067910|ref|YP_370679.1| ATP-dependent protease peptidase subunit [Burkholderia sp. 383]
 gi|123567386|sp|Q39BY1|HSLV_BURS3 RecName: Full=ATP-dependent protease subunit HslV
 gi|77968655|gb|ABB10035.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Burkholderia sp. 383]
          Length = 178

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T+ S  EI  K++ IA D+C+YTNHN ++ET++
Sbjct: 123 EGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178


>gi|89895296|ref|YP_518783.1| ATP-dependent protease peptidase subunit [Desulfitobacterium
           hafniense Y51]
 gi|122482355|sp|Q24UF3|HSLV_DESHY RecName: Full=ATP-dependent protease subunit HslV
 gi|89334744|dbj|BAE84339.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 176

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 103/175 (58%), Positives = 136/175 (77%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V+K   V +AGDGQV++GQ TVMK  ARKVRRL  G ++AGFAGS ADAFTL
Sbjct: 2   FHATTIVAVKKGEQVAMAGDGQVTMGQATVMKHKARKVRRLFHGKVLAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L R++VELAKDWRMDK LRNLEA++++ADK   L+I+G G+V+EP+
Sbjct: 62  FEKFENKLEEYQGNLQRAAVELAKDWRMDKALRNLEALLIVADKQSMLLISGSGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG+YAL+AARAL  +T     ++ ++AM +A+ ICVYTN  I++E L
Sbjct: 122 DGIAAIGSGGNYALAAARALVKNTDLQPAQLVQEAMEVASSICVYTNDQIIVEEL 176


>gi|23014724|ref|ZP_00054526.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Magnetospirillum magnetotacticum MS-1]
          Length = 182

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 118/183 (64%), Positives = 147/183 (80%), Gaps = 2/183 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +       H TTIL +RK G VVIAGDGQVSLG TV+K NARKVR++G  +I+ GFAG
Sbjct: 1   MSESSLP-SWHGTTILCLRKSGRVVIAGDGQVSLGATVIKGNARKVRKVGNDSILVGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTLLERLE KLE++P QL R+ VELAKDWR D+YLR LEAM+ +ADK ++LV+TG
Sbjct: 60  ATADAFTLLERLEAKLEKHPGQLTRACVELAKDWRTDRYLRRLEAMMAVADKDVSLVLTG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDVLEPE+G++ IGSGG+YAL+AARAL+      AE IARKAM+IAA ICVYTN N+++
Sbjct: 120 QGDVLEPEDGIIGIGSGGNYALAAARALIDIEGLDAETIARKAMAIAAGICVYTNGNMIV 179

Query: 183 ETL 185
           E+L
Sbjct: 180 ESL 182


>gi|24375648|ref|NP_719691.1| ATP-dependent protease peptidase subunit [Shewanella oneidensis
           MR-1]
 gi|113971850|ref|YP_735643.1| ATP-dependent protease peptidase subunit [Shewanella sp. MR-4]
 gi|114045944|ref|YP_736494.1| ATP-dependent protease peptidase subunit [Shewanella sp. MR-7]
 gi|117922131|ref|YP_871323.1| ATP-dependent protease peptidase subunit [Shewanella sp. ANA-3]
 gi|34222561|sp|Q8E9V0|HSLV_SHEON RecName: Full=ATP-dependent protease subunit HslV
 gi|122945000|sp|Q0HZL8|HSLV_SHESR RecName: Full=ATP-dependent protease subunit HslV
 gi|123029282|sp|Q0HED1|HSLV_SHESM RecName: Full=ATP-dependent protease subunit HslV
 gi|166223002|sp|A0L1J8|HSLV_SHESA RecName: Full=ATP-dependent protease subunit HslV
 gi|24350562|gb|AAN57135.1|AE015849_2 ATP-dependent protease HslV [Shewanella oneidensis MR-1]
 gi|113886534|gb|ABI40586.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Shewanella sp. MR-4]
 gi|113887386|gb|ABI41437.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Shewanella sp. MR-7]
 gi|117614463|gb|ABK49917.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Shewanella sp. ANA-3]
          Length = 174

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 131/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NA+KVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   LLRS+VELAKDWR D+ LR LEAM+++AD   +L+ITG GDV++PE+ ++
Sbjct: 62  ESKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEHDLV 121

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG+Y   +A   L +T+ SA EIA K+++IA DICV+TN    +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172


>gi|332286550|ref|YP_004418461.1| ATP-dependent protease peptidase subunit [Pusillimonas sp. T7-7]
 gi|330430503|gb|AEC21837.1| ATP-dependent protease peptidase subunit [Pusillimonas sp. T7-7]
          Length = 177

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 99/175 (56%), Positives = 130/175 (74%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + HATTI+ VR+   V + GDGQV+LG  V+K  ARK+RRL    I+AGFAG++ADAFTL
Sbjct: 3   QFHATTIICVRRGEHVALGGDGQVTLGNIVIKGTARKIRRLYNDKILAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+RS+VEL KDWR D+ LR LEAM+++ADK  TLV+TG GDVLEPE
Sbjct: 63  QERFEAKLEKHQGNLMRSAVELTKDWRTDRVLRRLEAMLIVADKEHTLVLTGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           NG+ AIGSGG+Y   +A   L ST  +  +I +K++ IA D+C+YTN N ++ETL
Sbjct: 123 NGLAAIGSGGAYAQSAALALLQSTDMAPADIVKKSLEIAGDLCIYTNQNHIVETL 177


>gi|171320570|ref|ZP_02909594.1| 20S proteasome A and B subunits [Burkholderia ambifaria MEX-5]
 gi|172062040|ref|YP_001809692.1| ATP-dependent protease peptidase subunit [Burkholderia ambifaria
           MC40-6]
 gi|238065813|sp|B1YPR2|HSLV_BURA4 RecName: Full=ATP-dependent protease subunit HslV
 gi|171094197|gb|EDT39280.1| 20S proteasome A and B subunits [Burkholderia ambifaria MEX-5]
 gi|171994557|gb|ACB65476.1| 20S proteasome A and B subunits [Burkholderia ambifaria MC40-6]
          Length = 178

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T+ S  EI  K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178


>gi|119773581|ref|YP_926321.1| ATP-dependent protease peptidase subunit [Shewanella amazonensis
           SB2B]
 gi|166222997|sp|A1S2P5|HSLV_SHEAM RecName: Full=ATP-dependent protease subunit HslV
 gi|119766081|gb|ABL98651.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Shewanella amazonensis SB2B]
          Length = 174

 Score =  174 bits (442), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 102/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHGKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L+R++VELAKDWR D+ LR LEA++ +AD   +L+ITG GDV++PEN ++
Sbjct: 62  EAKLEMHQGHLMRAAVELAKDWRTDRMLRKLEALLAVADAESSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG++A +AA AL+ +T   A EIA K+++IA DICV+TN    +E L
Sbjct: 122 AIGSGGNFAQAAATALLENTDLGALEIAEKSLTIAGDICVFTNQFKTIEEL 172


>gi|90408770|ref|ZP_01216915.1| ATP-dependent protease peptidase subunit [Psychromonas sp. CNPT3]
 gi|90310114|gb|EAS38254.1| ATP-dependent protease peptidase subunit [Psychromonas sp. CNPT3]
          Length = 179

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 97/174 (55%), Positives = 127/174 (72%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VV+ GDGQVSLG TVMK+NARKV RL    +IAGFAG +ADAFTLLER 
Sbjct: 2   TTIVSVRRGNQVVVGGDGQVSLGNTVMKSNARKVHRLYNNQVIAGFAGGTADAFTLLERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L R++VELAKDWR DK LR LEA++ +AD   + +ITG GDV+ PEN ++
Sbjct: 62  EAKLQAHQGNLERAAVELAKDWRTDKMLRRLEALLAVADAKHSYIITGNGDVIRPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A SAA AL+ +T   A+ I  KA++IA +ICV+TN    +E +   
Sbjct: 122 AIGSGGNFAQSAAMALLENTDLDAKTIVEKALTIAGNICVFTNTTQTIEVIDFE 175


>gi|170693981|ref|ZP_02885137.1| 20S proteasome A and B subunits [Burkholderia graminis C4D1M]
 gi|170141053|gb|EDT09225.1| 20S proteasome A and B subunits [Burkholderia graminis C4D1M]
          Length = 178

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  A+KVRR+  G ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AA+AL  +T+ S  EI  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|260886591|ref|ZP_05897854.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
           sputigena ATCC 35185]
 gi|330839575|ref|YP_004414155.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
           sputigena ATCC 35185]
 gi|260863734|gb|EEX78234.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
           sputigena ATCC 35185]
 gi|329747339|gb|AEC00696.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
           sputigena ATCC 35185]
          Length = 180

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ VR+ G   IAGDGQV+ GQ+ +MK+ ARKVRRL  G ++AGFAGS ADAFTL
Sbjct: 5   FHATTIVAVRQKGKTAIAGDGQVTFGQSAIMKSTARKVRRLYHGKVVAGFAGSVADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE++   L+R+SVELAK+WR D+ LR LEA++L+AD    L+I+G G+V+EP+
Sbjct: 65  FEKFEAKLEEFNGNLMRASVELAKEWRTDRVLRKLEALLLVADAETLLMISGGGEVIEPD 124

Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             V AIGSGG YAL+AARAL   T+  A EIA++A+++AADICV+TNHNI +E L 
Sbjct: 125 GDVAAIGSGGFYALAAARALVKHTEMEAAEIAKEALTLAADICVFTNHNIKVEELD 180


>gi|269925576|ref|YP_003322199.1| 20S proteasome A and B subunits [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789236|gb|ACZ41377.1| 20S proteasome A and B subunits [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 185

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 92/184 (50%), Positives = 124/184 (67%), Gaps = 1/184 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            H    M ATTIL V +DG++ +AGDGQV+ G ++ K  ARKVR L  G ++ GFAG+ A
Sbjct: 2   SHNPPMMRATTILAVLRDGLLAMAGDGQVTFGDSIFKHKARKVRTLYDGKVLVGFAGAVA 61

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DA TL ER E +L+QY   L RS+VELAK WR D+YLR LEA +++ D    L+ITG G+
Sbjct: 62  DALTLFERFESQLQQYSGDLRRSAVELAKQWRTDRYLRPLEAELIVGDPGQLLLITGQGE 121

Query: 127 VLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+EP+ G++AIGSG  Y   +A   L  T   AE I  +AM IAA++C+YTN NI +ET+
Sbjct: 122 VIEPDEGILAIGSGSVYALAAAQALLRHTNMDAEHITLEAMKIAAELCIYTNDNITIETI 181

Query: 186 KVGD 189
           +  +
Sbjct: 182 RAEN 185


>gi|170734441|ref|YP_001766388.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
           MC0-3]
 gi|254246900|ref|ZP_04940221.1| protease HslVU, subunit HslV [Burkholderia cenocepacia PC184]
 gi|238065814|sp|B1K0G1|HSLV_BURCC RecName: Full=ATP-dependent protease subunit HslV
 gi|124871676|gb|EAY63392.1| protease HslVU, subunit HslV [Burkholderia cenocepacia PC184]
 gi|169817683|gb|ACA92266.1| 20S proteasome A and B subunits [Burkholderia cenocepacia MC0-3]
          Length = 178

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL+ +T+ S  EI  K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTELSPREIVEKSLGIAGDMCIYTNHNRIIETIE 178


>gi|315186394|gb|EFU20154.1| 20S proteasome A and B subunits [Spirochaeta thermophila DSM 6578]
          Length = 178

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 97/175 (55%), Positives = 137/175 (78%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ +TT++ VR++GVV +AGDGQV++G T+MK NARKVR L  G ++ GFAG++ADAFTL
Sbjct: 3   EVKSTTVIAVRRNGVVAMAGDGQVTMGTTIMKGNARKVRTLYDGRVLVGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KL+++   +LRS+V LAKDWR D+ LR LEA++L+AD+   L+++G GDV+EPE
Sbjct: 63  FERFEGKLKEFSGDVLRSAVALAKDWRTDRMLRRLEALLLVADRERMLLLSGTGDVVEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +GV+AIGSGG YA +AA+AL+  T  SA  IA +++ IAA IC+YTN  I++E L
Sbjct: 123 DGVLAIGSGGPYAHAAAKALLSHTDLSARRIAEESLRIAASICIYTNEQIIVEEL 177


>gi|134299828|ref|YP_001113324.1| ATP-dependent protease peptidase subunit [Desulfotomaculum reducens
           MI-1]
 gi|189028445|sp|A4J5Z6|HSLV_DESRM RecName: Full=ATP-dependent protease subunit HslV
 gi|134052528|gb|ABO50499.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Desulfotomaculum reducens MI-1]
          Length = 176

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 102/175 (58%), Positives = 134/175 (76%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V++   V +AGDGQV+ G  T+MK  ARKVRRL  G ++AGFAGS ADAFTL
Sbjct: 2   FHATTIVAVKRGTKVAVAGDGQVTFGQNTIMKHTARKVRRLHNGQVLAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L+R++VELAK WR DKYLR LEAM+++A++   LV++G G+V+EP+
Sbjct: 62  FEKFEGKLEEYHGNLMRAAVELAKAWRTDKYLRTLEAMLIVANQEHLLVLSGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            GV AIGSGG YAL+AARAL   T  S ++I  +A+++AADICVYTN NIV+E +
Sbjct: 122 EGVTAIGSGGPYALAAARALTKHTNLSPKDITYEALNLAADICVYTNKNIVVEEI 176


>gi|115353189|ref|YP_775028.1| ATP-dependent protease peptidase subunit [Burkholderia ambifaria
           AMMD]
 gi|122321967|sp|Q0BAX9|HSLV_BURCM RecName: Full=ATP-dependent protease subunit HslV
 gi|115283177|gb|ABI88694.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Burkholderia ambifaria AMMD]
          Length = 178

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T+ S  EI  K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLEIAGDMCIYTNHNRIIETIE 178


>gi|157373671|ref|YP_001472271.1| ATP-dependent protease peptidase subunit [Shewanella sediminis
           HAW-EB3]
 gi|189036240|sp|A8FQM0|HSLV_SHESH RecName: Full=ATP-dependent protease subunit HslV
 gi|157316045|gb|ABV35143.1| 20S proteasome, A and B subunits [Shewanella sediminis HAW-EB3]
          Length = 174

 Score =  174 bits (441), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 102/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L++++VE+AKDWR DK LR LEA++ +AD T +L+ITG GDV++PEN ++
Sbjct: 62  EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADDTCSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +IGSGG++A SAA AL+ +T+ SA EIA K+++IA DICV+TN    +E L
Sbjct: 122 SIGSGGNFAQSAATALLENTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172


>gi|167561104|ref|ZP_02354020.1| ATP-dependent protease peptidase subunit [Burkholderia oklahomensis
           EO147]
 gi|167568323|ref|ZP_02361197.1| ATP-dependent protease peptidase subunit [Burkholderia oklahomensis
           C6786]
          Length = 178

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 98/176 (55%), Positives = 131/176 (74%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+  E KLE++   L R++VELAKDWR D+ LR LEAM++ AD + TLVITG GDVL+PE
Sbjct: 63  LDLFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADASTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T  S  +I  KA+ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTDLSPRDIVEKALEIAGDMCIYTNHNRIIETIE 178


>gi|218885589|ref|YP_002434910.1| ATP-dependent protease peptidase subunit [Desulfovibrio vulgaris
           str. 'Miyazaki F']
 gi|226704538|sp|B8DKL3|HSLV_DESVM RecName: Full=ATP-dependent protease subunit HslV
 gi|218756543|gb|ACL07442.1| 20S proteasome A and B subunits [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 185

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 102/180 (56%), Positives = 137/180 (76%), Gaps = 2/180 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++  TTIL VR    V +AGDGQV++GQ+V MK  ARKVRRL +  ++AGFAG++ADAF
Sbjct: 1   MELKGTTILAVRDADGVAMAGDGQVTMGQSVVMKHTARKVRRLYRDRVLAGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER E KLE++   L R++VELAKDWR DKYLR LEAM+L+AD    L++TG GDV+E
Sbjct: 61  TLFERFEAKLEEFGGNLTRAAVELAKDWRKDKYLRRLEAMLLVADAETILILTGTGDVIE 120

Query: 130 PENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           P++G+ AIGSGG YALSAARAL   T   AE + R+AM++A ++CV+TN ++ +ETL+  
Sbjct: 121 PDDGIAAIGSGGPYALSAARALSRHTTLDAETVVREAMAVAGELCVFTNGHLTVETLRRN 180


>gi|221065127|ref|ZP_03541232.1| 20S proteasome A and B subunits [Comamonas testosteroni KF-1]
 gi|264680257|ref|YP_003280167.1| 20S proteasome, A and B subunits [Comamonas testosteroni CNB-2]
 gi|299533129|ref|ZP_07046514.1| ATP-dependent protease peptidase subunit [Comamonas testosteroni
           S44]
 gi|220710150|gb|EED65518.1| 20S proteasome A and B subunits [Comamonas testosteroni KF-1]
 gi|262210773|gb|ACY34871.1| 20S proteasome, A and B subunits [Comamonas testosteroni CNB-2]
 gi|298718906|gb|EFI59878.1| ATP-dependent protease peptidase subunit [Comamonas testosteroni
           S44]
          Length = 181

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 100/179 (55%), Positives = 137/179 (76%), Gaps = 5/179 (2%)

Query: 12  KMHATTILTVRKDG----VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           + H TTIL+VR+       V I GDGQV+LG  V+K  ARKVR+L  G ++AGFAG++AD
Sbjct: 3   QFHGTTILSVRRQTPEGVQVAIGGDGQVTLGNIVIKGTARKVRKLYHGKVLAGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ER E KLE++   L R+++EL K+WR D+ LR LEAM+ +AD T +L+ITG GDV
Sbjct: 63  AFTLFERFEAKLEKHQGNLTRAAIELTKEWRTDRVLRKLEAMLAVADATTSLIITGNGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           LEPE G++AIGSGG+YA SAA+AL+ +T+ SAE++ RK+++IA ++C+YTN N  +ETL
Sbjct: 123 LEPEQGIVAIGSGGAYAHSAAKALLNNTELSAEDVVRKSLAIAGELCIYTNMNHTIETL 181


>gi|300721289|ref|YP_003710560.1| peptidase component of the HslUV protease [Xenorhabdus nematophila
           ATCC 19061]
 gi|297627777|emb|CBJ88308.1| peptidase component of the HslUV protease [Xenorhabdus nematophila
           ATCC 19061]
          Length = 176

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 101/174 (58%), Positives = 131/174 (75%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ ++G TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGKVVIGGDGQATMGHTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGGSYA +AARA++  T   A EI  +A+SIAADIC+YTNHN   E L   
Sbjct: 122 AIGSGGSYAQAAARAMLETTDLGAREITERALSIAADICIYTNHNHNFEELSSK 175


>gi|325295313|ref|YP_004281827.1| ATP-dependent protease hslV [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065761|gb|ADY73768.1| ATP-dependent protease hslV [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 177

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 106/177 (59%), Positives = 135/177 (76%), Gaps = 1/177 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  HATTI  V +DG V +AGDGQV+LG T+ K  ARKVR++  G ++ GFAGS ADAF 
Sbjct: 1   MDFHATTICAVLRDGKVAMAGDGQVTLGNTIFKNGARKVRKIYGGRVLTGFAGSVADAFA 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLER E KL+ Y   LL+S+VELAKDWR D+ LR LEAM+L+ADKT  L+I+G GDV+EP
Sbjct: 61  LLERFEDKLQTYSGNLLKSAVELAKDWRTDRVLRRLEAMLLVADKTKILLISGNGDVIEP 120

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +  VMAIGSGG+YA +AA AL  +T  SA+EIA+K++ IA +ICVYTN NI++E L 
Sbjct: 121 DIPVMAIGSGGAYAQAAATALYENTDLSAKEIAQKSLEIAGNICVYTNTNIIVEELD 177


>gi|113461677|ref|YP_719746.1| ATP-dependent protease peptidase subunit [Haemophilus somnus 129PT]
 gi|170718715|ref|YP_001783905.1| ATP-dependent protease peptidase subunit [Haemophilus somnus 2336]
 gi|122945435|sp|Q0I5E1|HSLV_HAES1 RecName: Full=ATP-dependent protease subunit HslV
 gi|189028449|sp|B0US06|HSLV_HAES2 RecName: Full=ATP-dependent protease subunit HslV
 gi|112823720|gb|ABI25809.1| heat shock protein [Haemophilus somnus 129PT]
 gi|168826844|gb|ACA32215.1| 20S proteasome A and B subunits [Haemophilus somnus 2336]
          Length = 175

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 105/172 (61%), Positives = 135/172 (78%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL  G ++ GFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLTGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAK+WR D+ LR LEAM+++ADKT +L+ITG GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKEWRTDRALRRLEAMLIVADKTESLIITGNGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YALSAARAL+ +T  SA EI  K++ IA DICV+TN    +E L
Sbjct: 122 LAIGSGGNYALSAARALVENTDLSAREIVEKSLKIAGDICVFTNLTHTIEEL 173


>gi|323524457|ref|YP_004226610.1| 20S proteasome subunits A/B [Burkholderia sp. CCGE1001]
 gi|323381459|gb|ADX53550.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1001]
          Length = 178

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 102/176 (57%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  A+KVRR+  G ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +TQ S  EI  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALADNTQLSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|82703660|ref|YP_413226.1| ATP-dependent protease peptidase subunit [Nitrosospira multiformis
           ATCC 25196]
 gi|82411725|gb|ABB75834.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Nitrosospira multiformis ATCC 25196]
          Length = 196

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 105/179 (58%), Positives = 134/179 (74%), Gaps = 1/179 (0%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + H TTIL+ R+   V + GDGQV+LG  V KA+ARKVRRL    I+AGFAG +ADA
Sbjct: 18  DMAEYHGTTILSARRGNHVALGGDGQVTLGAVVAKASARKVRRLYHDRILAGFAGGTADA 77

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           FTL ER E KLE++   L+RS+VELAKDWR D+ LR LEAM+++AD   TL+ITG GDV+
Sbjct: 78  FTLFERFEGKLEKHQGHLMRSAVELAKDWRTDRILRRLEAMLVVADPAATLIITGAGDVI 137

Query: 129 EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           EPE G+ AIGSGGSYA SAARAL+ +T  +  EI +KA++IA D+C+YTN N V+E L+
Sbjct: 138 EPEFGLAAIGSGGSYAHSAARALLENTDLTPPEIVKKALTIAGDLCIYTNQNHVIEVLE 196


>gi|299472682|emb|CBN78334.1| ATP-dependent protease peptidase subunit [Ectocarpus siliculosus]
          Length = 212

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 106/189 (56%), Positives = 141/189 (74%), Gaps = 1/189 (0%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +       ++MH TTIL VRK+G VV+ GDGQVS G  V+K NA KVR+LG G ++AG+A
Sbjct: 20  MHSSASSGLEMHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYA 79

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           GS+ADA TL+ERLE KLE++  QL+ + V LAKDWR DKYLR LEA++L+AD   +L +T
Sbjct: 80  GSTADALTLMERLEGKLEEHEGQLMNACVALAKDWRTDKYLRRLEAVVLVADSKFSLKVT 139

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G+GDVL P  GV+A+GSG  YAL+AARAL      SAEE+ARK+M IA+++CVYTN++  
Sbjct: 140 GLGDVLAPNGGVIAVGSGQPYALAAARALSGQEDLSAEEVARKSMEIASELCVYTNNHFT 199

Query: 182 LETLKVGDE 190
           + +L V +E
Sbjct: 200 MHSLDVEEE 208


>gi|169757653|gb|ACA70969.1| 20S proteasome A and B subunits [Pseudomonas putida W619]
          Length = 192

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 102/175 (58%), Positives = 140/175 (80%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 18  TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYNGEVIAGFAGATADAFTLFERF 77

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +L+++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 78  EAQLQKHSGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137

Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG+YA +AARAL++ T  SA EIA  A++IA DICV+TNHN+ +E   + +
Sbjct: 138 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAE 192


>gi|317050676|ref|YP_004111792.1| 20S proteasome subunits A/B [Desulfurispirillum indicum S5]
 gi|316945760|gb|ADU65236.1| 20S proteasome A and B subunits [Desulfurispirillum indicum S5]
          Length = 175

 Score =  174 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 99/174 (56%), Positives = 137/174 (78%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI+ VR+DG V + GDGQV+LG TVMKA A+KVR L  G +I+GFAGS+ADAF L 
Sbjct: 2   FKGTTIVCVRRDGRVALGGDGQVTLGNTVMKATAKKVRTLADGAVISGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ E KL+++ N L R++VE+AKDWR D+ LR LEAM+++AD+  + +I+G GD++EPE+
Sbjct: 62  EKFEGKLKKHGNILTRAAVEMAKDWRSDRILRRLEAMLIVADRENSFIISGTGDIVEPED 121

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           G++AIGSGGSYA++AARAL  +T  +A +IARK++ IAADIC+Y+N NI +  L
Sbjct: 122 GILAIGSGGSYAMAAARALRENTDLTAVDIARKSLEIAADICIYSNRNITILEL 175


>gi|85710345|ref|ZP_01041410.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. NAP1]
 gi|85689055|gb|EAQ29059.1| ATP-dependent protease peptidase subunit [Erythrobacter sp. NAP1]
          Length = 186

 Score =  174 bits (440), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 117/185 (63%), Positives = 150/185 (81%), Gaps = 1/185 (0%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-NIIA 59
           M      H  ++ H TTI+ V++ G  V+AGDGQVS+G TVMK NARKVRR+G+G  ++A
Sbjct: 1   MSENNGDHGLIQWHGTTIIGVKRGGKTVVAGDGQVSMGNTVMKPNARKVRRIGEGEKVVA 60

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
           GFAG++ADAFTL ERLE+KLEQY  QL+R+SVELAKDWR DKYLRNLEA++++AD+   L
Sbjct: 61  GFAGATADAFTLFERLERKLEQYSGQLMRASVELAKDWRTDKYLRNLEALMIVADEESLL 120

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
           V+TG GDVLEPE G+ AIGSGG+YAL+AARAL   +  AE+IARKAM++AA+ICV+TN N
Sbjct: 121 VLTGNGDVLEPEGGIAAIGSGGNYALAAARALSDYEEDAEQIARKAMAVAAEICVFTNGN 180

Query: 180 IVLET 184
           + +ET
Sbjct: 181 LTVET 185


>gi|239908472|ref|YP_002955214.1| ATP-dependent protease HslV [Desulfovibrio magneticus RS-1]
 gi|259491386|sp|C4XN25|HSLV_DESMR RecName: Full=ATP-dependent protease subunit HslV
 gi|239798339|dbj|BAH77328.1| ATP-dependent protease HslV [Desulfovibrio magneticus RS-1]
          Length = 181

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 98/179 (54%), Positives = 134/179 (74%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAF 69
           +++  TTI+ VR +  V +AGDGQV+LGQ +  K  ARKVRR+ K  ++ GFAG++ADAF
Sbjct: 1   MQLRGTTIVAVRTEAGVAVAGDGQVTLGQAIAVKHTARKVRRMYKDKVVIGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER E KLE++   L+R+SVELAKDWR DKYLR LEAM+++AD    L+++G GDV+E
Sbjct: 61  TLFERFEAKLEEFGGNLVRASVELAKDWRKDKYLRRLEAMMIVADAGNVLILSGTGDVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P++GV AIGSGG Y   +A   L +T+ SA EI  K+M+IAA++CVYTN  +V+ETL+ 
Sbjct: 121 PDDGVAAIGSGGPYAMAAARALLRNTELSAREIVEKSMAIAAEMCVYTNDQLVVETLEK 179


>gi|170728750|ref|YP_001762776.1| ATP-dependent protease peptidase subunit [Shewanella woodyi ATCC
           51908]
 gi|238065941|sp|B1KK50|HSLV_SHEWM RecName: Full=ATP-dependent protease subunit HslV
 gi|169814097|gb|ACA88681.1| 20S proteasome A and B subunits [Shewanella woodyi ATCC 51908]
          Length = 174

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 135/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NA+KVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L++++VE+AKDWR DK LR LEA++ +AD T +L+ITG GDV++PEN ++
Sbjct: 62  EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADDTCSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG++A SAA AL+ +T+ +A EIA K+++IA DICV+TN    +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTELTALEIAEKSLTIAGDICVFTNQFKTIEEL 172


>gi|78043411|ref|YP_360611.1| ATP-dependent protease peptidase subunit [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|123575920|sp|Q3AB73|HSLV_CARHZ RecName: Full=ATP-dependent protease subunit HslV
 gi|77995526|gb|ABB14425.1| ATP-dependent protease HslV [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 179

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 96/178 (53%), Positives = 131/178 (73%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              TTI+ V++ G V I GDGQV+ GQ TV+K  A K+R+L +G ++AGFAG+ ADAFTL
Sbjct: 2   FEGTTIVAVKRGGEVAIGGDGQVTFGQQTVIKRRANKIRKLYRGKVLAGFAGAVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            +  EKKLE+    L R++VEL K WR DK+LR LEAM+L+AD+   L+I+G G+V+EP+
Sbjct: 62  FDLFEKKLEESQGNLTRAAVELVKTWRTDKFLRRLEAMLLVADRERILLISGTGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           +GV+AIGSGG+YAL+AARAL+  T  SA EI  +++ IA +ICVYTN  I +ET+   
Sbjct: 122 DGVLAIGSGGNYALAAARALINHTNLSAREIVMESLKIAQEICVYTNDFITVETIGGE 179


>gi|251797451|ref|YP_003012182.1| ATP-dependent protease peptidase subunit [Paenibacillus sp. JDR-2]
 gi|247545077|gb|ACT02096.1| 20S proteasome A and B subunits [Paenibacillus sp. JDR-2]
          Length = 181

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 101/178 (56%), Positives = 136/178 (76%), Gaps = 3/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++ HATTI  VR +G   IAGDGQV+ G +V MK  A+KVRRL +G +IAGFAGS ADA 
Sbjct: 3   MEFHATTICAVRHEGKGAIAGDGQVTFGNSVVMKNKAKKVRRLYRGQVIAGFAGSVADAI 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE++   L R++VELAKDWR D+ LR LEA++L+ D++  L+I+G G+++E
Sbjct: 63  TLFEKFEAKLEEHHGNLQRAAVELAKDWRTDRILRKLEALMLVMDQSGLLLISGNGEIIE 122

Query: 130 PENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G++AIGSGG+YALSAARAL        A++IAR A+  AADICVYTNHNI++E +
Sbjct: 123 PDDGILAIGSGGNYALSAARALQKHAPHMEAKDIARAALETAADICVYTNHNIIVEEI 180


>gi|57239495|ref|YP_180631.1| ATP-dependent protease peptidase subunit [Ehrlichia ruminantium
           str. Welgevonden]
 gi|58579475|ref|YP_197687.1| ATP-dependent protease peptidase subunit [Ehrlichia ruminantium
           str. Welgevonden]
 gi|81557267|sp|Q5HAB3|HSLV_EHRRW RecName: Full=ATP-dependent protease subunit HslV
 gi|57161574|emb|CAH58502.1| ATP-dependent protease HslV [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418101|emb|CAI27305.1| ATP-dependent protease hslV [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 189

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 114/189 (60%), Positives = 150/189 (79%), Gaps = 7/189 (3%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  K  + KM+ TTIL +R++  V+IAGDGQVSLG TVMK +A+KV+RL    +I GFAG
Sbjct: 1   MEHKDNS-KMYGTTILCIRRNNHVIIAGDGQVSLGHTVMKNSAKKVKRLANDTVITGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++LVI+G
Sbjct: 60  ATADAFTLFERLEGKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLVISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARAL------MSTQNSAEEIARKAMSIAADICVYTN 177
            GDVLEPENG+ AIGSGG+YAL+AA+AL       S   + E I   AM+IAA+IC+YTN
Sbjct: 120 NGDVLEPENGIAAIGSGGNYALAAAKALCESNDKFSQNMTLEYIVTTAMNIAAEICIYTN 179

Query: 178 HNIVLETLK 186
           +NI++E ++
Sbjct: 180 NNIIMEKIE 188


>gi|157825562|ref|YP_001493282.1| ATP-dependent protease peptidase subunit [Rickettsia akari str.
           Hartford]
 gi|166222993|sp|A8GMZ9|HSLV_RICAH RecName: Full=ATP-dependent protease subunit HslV
 gi|157799520|gb|ABV74774.1| ATP-dependent protease peptidase subunit [Rickettsia akari str.
           Hartford]
          Length = 182

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 103/180 (57%), Positives = 137/180 (76%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL ++K+  ++IA DGQVS G TV+K+ ARK+R +    IIAGFAGS+A
Sbjct: 1   MSDNLALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+LE K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++ D++  L++TG GD
Sbjct: 61  DGLALFEKLEVKIEQHKHNLLRSAVELAKDWRNDKYLRRLEAMMIVGDRSHILILTGNGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPEN V AIGSGG +ALSAARAL       +AEEIA K+M+IAAD+CV++NHNI++E 
Sbjct: 121 VVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK 180


>gi|238764480|ref|ZP_04625428.1| ATP-dependent protease hslV [Yersinia kristensenii ATCC 33638]
 gi|238697292|gb|EEP90061.1| ATP-dependent protease hslV [Yersinia kristensenii ATCC 33638]
          Length = 182

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL   N+IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYHDNVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +ADKT +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADKTASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA SAARAL+ +T+  A +I  K++SIA DIC+YTN    +E L   
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEELTYE 175


>gi|154249396|ref|YP_001410221.1| ATP-dependent protease peptidase subunit [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153332|gb|ABS60564.1| 20S proteasome A and B subunits [Fervidobacterium nodosum Rt17-B1]
          Length = 188

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 91/184 (49%), Positives = 131/184 (71%), Gaps = 1/184 (0%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
            + D +      +TT+L ++KDG VV+A DGQV+ G TVMK  ARKVR++G G ++AGFA
Sbjct: 5   ALNDFNDKNMWRSTTVLAIKKDGKVVMAADGQVTYGATVMKGTARKVRKIGDGKVLAGFA 64

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G+ ADA TLLER E K  ++   LL++++ELAKDWR+D+ LR LEAM+++ADK   L+++
Sbjct: 65  GAVADAMTLLERFENKYREWNGNLLKAAIELAKDWRLDRALRRLEAMLIVADKDNLLLLS 124

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G G+V++P+  V+AIGSGG Y   +A   L +T   A +I  +AM IA++IC+YTN NI 
Sbjct: 125 GTGEVIQPDEDVIAIGSGGPYALAAARALLRNTDFDARKIVEEAMKIASEICIYTNENIT 184

Query: 182 LETL 185
           +E L
Sbjct: 185 IEEL 188


>gi|67458907|ref|YP_246531.1| ATP-dependent protease peptidase subunit [Rickettsia felis
           URRWXCal2]
 gi|75536652|sp|Q4UM54|HSLV_RICFE RecName: Full=ATP-dependent protease subunit HslV
 gi|67004440|gb|AAY61366.1| Heat shock protein HslV [Rickettsia felis URRWXCal2]
          Length = 182

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 103/180 (57%), Positives = 137/180 (76%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL ++K+  ++IA DGQVS G T++K+ ARK+R +    IIAGFAGS+A
Sbjct: 1   MSDNLALHGTTILCLKKNEEIIIAADGQVSHGNTILKSTARKLRTIANNKIIAGFAGSTA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+LE K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD+   L++TG GD
Sbjct: 61  DGLALFEKLEVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRNHILILTGNGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPEN V AIGSGG +ALSAARAL       +AEEIA K+M+IAAD+CV++NHNI++E 
Sbjct: 121 VVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK 180


>gi|238754733|ref|ZP_04616085.1| ATP-dependent protease hslV [Yersinia ruckeri ATCC 29473]
 gi|238707041|gb|EEP99406.1| ATP-dependent protease hslV [Yersinia ruckeri ATCC 29473]
          Length = 176

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 100/172 (58%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAARAL+ +T+  A +I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEELT 173


>gi|157963593|ref|YP_001503627.1| ATP-dependent protease peptidase subunit [Shewanella pealeana ATCC
           700345]
 gi|189036239|sp|A8H955|HSLV_SHEPA RecName: Full=ATP-dependent protease subunit HslV
 gi|157848593|gb|ABV89092.1| 20S proteasome A and B subunits [Shewanella pealeana ATCC 700345]
          Length = 174

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NA+KVRRL    ++AGFAGS+ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGSTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L+R++VE+AKDWR DK LR LEA++ +AD   +L+ITG GDV++PEN ++
Sbjct: 62  EAKLEMHQGHLMRAAVEMAKDWRSDKVLRKLEALLAVADAESSLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG++A SAA AL+ +T  SA EIA K+++IA +ICV+TN    +E LK
Sbjct: 122 AIGSGGAFAQSAATALLENTDLSALEIAEKSLTIAGNICVFTNQFKTIEELK 173


>gi|123440505|ref|YP_001004499.1| ATP-dependent protease peptidase subunit [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|238750845|ref|ZP_04612343.1| ATP-dependent protease hslV [Yersinia rohdei ATCC 43380]
 gi|166223006|sp|A1JI09|HSLV_YERE8 RecName: Full=ATP-dependent protease subunit HslV
 gi|122087466|emb|CAL10247.1| heat shock protein [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|238710989|gb|EEQ03209.1| ATP-dependent protease hslV [Yersinia rohdei ATCC 43380]
          Length = 174

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 100/172 (58%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAARAL+ +T+  A +I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEELT 173


>gi|74318559|ref|YP_316299.1| ATP-dependent protease peptidase subunit [Thiobacillus
           denitrificans ATCC 25259]
 gi|123611232|sp|Q3SFW2|HSLV_THIDA RecName: Full=ATP-dependent protease subunit HslV
 gi|74058054|gb|AAZ98494.1| putative heat shock protein [Thiobacillus denitrificans ATCC 25259]
          Length = 188

 Score =  174 bits (440), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 99/175 (56%), Positives = 134/175 (76%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTIL+VR+   V + GDGQV+LG  V+K+ ARK+RRL +  ++AGFAG +ADAFTL
Sbjct: 3   QYRGTTILSVRRGAEVALGGDGQVTLGNIVIKSTARKIRRLYQEKVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KL+++   LLRS+VELAKDWR D+ LR LEAM+ +AD+  +L+ITG GDVLEPE
Sbjct: 63  FERFEAKLDKHSGHLLRSAVELAKDWRTDRMLRRLEAMLAVADREHSLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            G+ AIGSGG++A SAARAL+ +T  +  EI +K+++IA DIC+Y+N N V+E L
Sbjct: 123 LGIAAIGSGGAFAQSAARALLENTDLAPLEIVKKSLTIAGDICIYSNQNHVIEVL 177


>gi|261819536|ref|YP_003257642.1| ATP-dependent protease peptidase subunit [Pectobacterium wasabiae
           WPP163]
 gi|261603549|gb|ACX86035.1| 20S proteasome A and B subunits [Pectobacterium wasabiae WPP163]
          Length = 176

 Score =  174 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 97/171 (56%), Positives = 130/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQ +LG TVMK N RKVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGQVVIGGDGQATLGNTVMKGNVRKVRRLYHDRVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++
Sbjct: 62  ERKLELHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA +AARAL+ +T+  A +I  K++ IA DIC+YTN    +E L
Sbjct: 122 AIGSGGPYAQAAARALLENTELGALDIVEKSLGIAGDICIYTNQFHTIEEL 172


>gi|182677249|ref|YP_001831395.1| ATP-dependent protease peptidase subunit [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182633132|gb|ACB93906.1| 20S proteasome A and B subunits [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 197

 Score =  174 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 117/189 (61%), Positives = 143/189 (75%), Gaps = 4/189 (2%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
                      H TTIL V+K G  VI GDGQV+LGQT++K NARKVRRL KG++I GFA
Sbjct: 9   AFSQASSPESWHGTTILMVKKGGRTVIGGDGQVTLGQTIVKGNARKVRRLSKGDVIGGFA 68

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK   LV+T
Sbjct: 69  GATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKQAGLVLT 128

Query: 123 GMGDVLEPE----NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH 178
           G GDVLEPE      VM IGSGG+YAL+A RAL++T+  AE I RK++ IAADICVYTN 
Sbjct: 129 GTGDVLEPEMTEQGSVMGIGSGGNYALAAGRALLATEFDAETITRKSLEIAADICVYTNR 188

Query: 179 NIVLETLKV 187
           N+++E++  
Sbjct: 189 NLIIESIDA 197


>gi|296448578|ref|ZP_06890451.1| 20S proteasome A and B subunits [Methylosinus trichosporium OB3b]
 gi|296253918|gb|EFH01072.1| 20S proteasome A and B subunits [Methylosinus trichosporium OB3b]
          Length = 188

 Score =  174 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 123/180 (68%), Positives = 146/180 (81%), Gaps = 4/180 (2%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               HATTI+ V+K G  VIAGDGQVSLGQT++KANA+KVRRLGKG++IAGFAG++ADAF
Sbjct: 9   PAVWHATTIVLVKKGGRTVIAGDGQVSLGQTIVKANAKKVRRLGKGDVIAGFAGATADAF 68

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ERLE KLEQYP QL R+ VELAKDWRMD+YLR LEAM+L+AD+ + L +TG GDVLE
Sbjct: 69  TLFERLEGKLEQYPGQLTRACVELAKDWRMDRYLRRLEAMMLVADREVGLTLTGAGDVLE 128

Query: 130 P----ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P       V AIGSGG+YAL+AARAL+ T   AE IAR+AM IAA+ICVYTN NIV+E +
Sbjct: 129 PQAFEHGSVAAIGSGGNYALAAARALLDTPLDAEPIARRAMEIAAEICVYTNTNIVVEAI 188


>gi|107024022|ref|YP_622349.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
           AU 1054]
 gi|116691109|ref|YP_836732.1| ATP-dependent protease peptidase subunit [Burkholderia cenocepacia
           HI2424]
 gi|123371180|sp|Q1BSM9|HSLV_BURCA RecName: Full=ATP-dependent protease subunit HslV
 gi|166221629|sp|A0KBG2|HSLV_BURCH RecName: Full=ATP-dependent protease subunit HslV
 gi|105894211|gb|ABF77376.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Burkholderia cenocepacia AU 1054]
 gi|116649198|gb|ABK09839.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Burkholderia cenocepacia HI2424]
          Length = 178

 Score =  174 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL+ +T  S  +I  K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALVENTDLSPRDIVEKSLGIAGDMCIYTNHNRIIETIE 178


>gi|238786104|ref|ZP_04630060.1| ATP-dependent protease hslV [Yersinia bercovieri ATCC 43970]
 gi|238712981|gb|EEQ05037.1| ATP-dependent protease hslV [Yersinia bercovieri ATCC 43970]
          Length = 174

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 100/172 (58%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAARAL+ +T+  A +I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAARALLDNTELGARDIVEKSLSIAGDICIYTNRFQTIEELT 173


>gi|320528984|ref|ZP_08030076.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
           artemidis F0399]
 gi|320138614|gb|EFW30504.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas
           artemidis F0399]
          Length = 179

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 99/179 (55%), Positives = 129/179 (72%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI+ V+K   V IAGDGQV+ G+  +MKA ARKVRRL  G I+AGFAGS ADAF
Sbjct: 1   MTFHATTIVAVKKGNKVAIAGDGQVTFGERAIMKATARKVRRLYHGKILAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE Y   L R++VELAKDWR DK LR LEA++L+ADK   L+I+G G+V+E
Sbjct: 61  TLFEKFEAKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADKDGILMISGNGEVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P+    AIGSGG +   +A   ++ +   A  +A++++SIAADICVYTNHNI +E L+ 
Sbjct: 121 PDGDCTAIGSGGFFALAAARALILHSDMDAPAVAKESLSIAADICVYTNHNITVEVLES 179


>gi|58617529|ref|YP_196728.1| ATP-dependent protease peptidase subunit [Ehrlichia ruminantium
           str. Gardel]
 gi|75432728|sp|Q5FGD0|HSLV_EHRRG RecName: Full=ATP-dependent protease subunit HslV
 gi|58417141|emb|CAI28254.1| ATP-dependent protease hslV [Ehrlichia ruminantium str. Gardel]
          Length = 189

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 113/189 (59%), Positives = 150/189 (79%), Gaps = 7/189 (3%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  K  + KM+ TTIL +R++  V+IAGDGQVSLG TVMK +A+KV+RL    +I GFAG
Sbjct: 1   MEHKDNS-KMYGTTILCIRRNNNVIIAGDGQVSLGHTVMKNSAKKVKRLANDTVITGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++L+I+G
Sbjct: 60  ATADAFTLFERLEGKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARAL------MSTQNSAEEIARKAMSIAADICVYTN 177
            GDVLEPENG+ AIGSGG+YAL+AA+AL       S   + E I   AM+IAA+IC+YTN
Sbjct: 120 NGDVLEPENGIAAIGSGGNYALAAAKALCESNDKFSQNMTLEYIVTTAMNIAAEICIYTN 179

Query: 178 HNIVLETLK 186
           +NI++E ++
Sbjct: 180 NNIIMEKIE 188


>gi|294139045|ref|YP_003555023.1| ATP-dependent protease HslV [Shewanella violacea DSS12]
 gi|293325514|dbj|BAJ00245.1| ATP-dependent protease HslV [Shewanella violacea DSS12]
          Length = 174

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 99/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L++++VE+AKDWR DK LR LEA++ +AD   +L+ITG GDV++PE  ++
Sbjct: 62  EAKLEMHQGHLMKAAVEMAKDWRSDKMLRKLEALLAVADSECSLIITGNGDVIQPEGDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG +A SAA AL+ +T+ +A EIA K+++IA  ICV+TN    +E L
Sbjct: 122 AIGSGGPFAQSAATALLENTELTATEIAEKSLTIAGGICVFTNQFKTIEEL 172


>gi|313895640|ref|ZP_07829196.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312975766|gb|EFR41225.1| ATP-dependent protease HslVU, peptidase subunit [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 179

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 98/179 (54%), Positives = 128/179 (71%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI+ V+K   V IAGDGQV+ G+  +MKA ARKVRRL  G I+AGFAGS ADAF
Sbjct: 1   MTFHATTIVAVKKGNKVAIAGDGQVTFGERAIMKATARKVRRLYHGKILAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE Y   L R++VELAKDWR DK LR LEA++L+ADK   L+I+G G+V+E
Sbjct: 61  TLFEKFEAKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADKDGILMISGNGEVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P+    AIGSGG +   +A    + +   A  +A+++++IAADICVYTNHNI +E L+ 
Sbjct: 121 PDGDCTAIGSGGFFALAAARALTLHSDMDAPAVAKESLAIAADICVYTNHNITVEVLES 179


>gi|209521636|ref|ZP_03270331.1| 20S proteasome A and B subunits [Burkholderia sp. H160]
 gi|209497938|gb|EDZ98098.1| 20S proteasome A and B subunits [Burkholderia sp. H160]
          Length = 178

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  A+KVRR+  G ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGNKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AA+AL  +T+ S  +I  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALSDNTELSPRDIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|26991677|ref|NP_747102.1| ATP-dependent protease peptidase subunit [Pseudomonas putida
           KT2440]
 gi|228925262|ref|YP_001671270.2| ATP-dependent protease peptidase subunit [Pseudomonas putida GB-1]
 gi|229328216|ref|YP_001270178.2| ATP-dependent protease peptidase subunit [Pseudomonas putida F1]
 gi|34222531|sp|Q88D28|HSLV_PSEPK RecName: Full=ATP-dependent protease subunit HslV
 gi|24986776|gb|AAN70566.1|AE016699_7 heat shock protein HslV [Pseudomonas putida KT2440]
          Length = 176

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG+YA +AARAL++ T  SA EIA  A++IA DICV+TNHN+ +E   + D
Sbjct: 122 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 176


>gi|119470417|ref|ZP_01613145.1| ATP-dependent protease peptidase subunit [Alteromonadales bacterium
           TW-7]
 gi|119446342|gb|EAW27618.1| ATP-dependent protease peptidase subunit [Alteromonadales bacterium
           TW-7]
          Length = 172

 Score =  173 bits (439), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 103/171 (60%), Positives = 134/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+D  VVI GDGQVSLG TVMK NARKVRRL  G +IAGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRDNKVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG++A SAA AL+ +T  SA EI  K+++IA DICV+TN+   +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGDICVFTNNFQTIEEL 172


>gi|261855922|ref|YP_003263205.1| 20S proteasome A and subunit betas [Halothiobacillus neapolitanus
           c2]
 gi|261836391|gb|ACX96158.1| 20S proteasome A and B subunits [Halothiobacillus neapolitanus c2]
          Length = 179

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 102/176 (57%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL VRK+G  VI GDGQV+LG TV+K NARKVRRL  G+++AGFAG++ADAFTL 
Sbjct: 4   FRGTTILCVRKNGQTVIGGDGQVTLGNTVVKGNARKVRRLYNGDVLAGFAGATADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ E KLE++   LLRS+VELAK+WR D+ +R LEAM+++AD+T  L I+G GDV+EPE 
Sbjct: 64  EKFEAKLEKFGGNLLRSAVELAKEWRTDRAMRRLEAMLVVADRTHMLTISGNGDVIEPET 123

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            ++AIGSGG++A +AA ALM  +   A  IA  A++IA DIC+YTNHN+ +E L  
Sbjct: 124 DLIAIGSGGAFAQAAATALMQHSALEARAIAEAALNIAGDICIYTNHNLTIEVLDA 179


>gi|22124213|ref|NP_667636.1| ATP-dependent protease peptidase subunit [Yersinia pestis KIM 10]
 gi|45439971|ref|NP_991510.1| ATP-dependent protease peptidase subunit [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51594456|ref|YP_068647.1| ATP-dependent protease peptidase subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806254|ref|YP_650170.1| ATP-dependent protease peptidase subunit [Yersinia pestis Antiqua]
 gi|108813907|ref|YP_649674.1| ATP-dependent protease peptidase subunit [Yersinia pestis Nepal516]
 gi|145601042|ref|YP_001165118.1| ATP-dependent protease peptidase subunit [Yersinia pestis Pestoides
           F]
 gi|150260793|ref|ZP_01917521.1| heat shock protein [Yersinia pestis CA88-4125]
 gi|153950787|ref|YP_001399113.1| ATP-dependent protease peptidase subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|162418923|ref|YP_001604749.1| ATP-dependent protease peptidase subunit [Yersinia pestis Angola]
 gi|165928393|ref|ZP_02224225.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165936313|ref|ZP_02224882.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011508|ref|ZP_02232406.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213703|ref|ZP_02239738.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167402505|ref|ZP_02307959.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419142|ref|ZP_02310895.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425892|ref|ZP_02317645.1| ATP-dependent protease HslV [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167469786|ref|ZP_02334490.1| ATP-dependent protease HslV [Yersinia pestis FV-1]
 gi|170026310|ref|YP_001722815.1| ATP-dependent protease peptidase subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186893444|ref|YP_001870556.1| ATP-dependent protease peptidase subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218927321|ref|YP_002345196.1| ATP-dependent protease peptidase subunit [Yersinia pestis CO92]
 gi|229836220|ref|ZP_04456388.1| peptidase component of the HslUV protease [Yersinia pestis
           Pestoides A]
 gi|229839959|ref|ZP_04460118.1| peptidase component of the HslUV protease [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842041|ref|ZP_04462196.1| peptidase component of the HslUV protease [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229904433|ref|ZP_04519544.1| peptidase component of the HslUV protease [Yersinia pestis
           Nepal516]
 gi|270488705|ref|ZP_06205779.1| ATP-dependent protease HslVU, peptidase subunit [Yersinia pestis
           KIM D27]
 gi|294502202|ref|YP_003566264.1| ATP-dependent protease peptidase subunit [Yersinia pestis Z176003]
 gi|21759179|sp|Q8ZJJ4|HSLV_YERPE RecName: Full=ATP-dependent protease subunit HslV
 gi|85542208|sp|Q66G84|HSLV_YERPS RecName: Full=ATP-dependent protease subunit HslV
 gi|122979804|sp|Q1CBE7|HSLV_YERPA RecName: Full=ATP-dependent protease subunit HslV
 gi|122979888|sp|Q1CD56|HSLV_YERPN RecName: Full=ATP-dependent protease subunit HslV
 gi|166223007|sp|A4TS83|HSLV_YERPP RecName: Full=ATP-dependent protease subunit HslV
 gi|166918424|sp|A7FCY5|HSLV_YERP3 RecName: Full=ATP-dependent protease subunit HslV
 gi|238065952|sp|B2JZC6|HSLV_YERPB RecName: Full=ATP-dependent protease subunit HslV
 gi|238065953|sp|B1JQ75|HSLV_YERPY RecName: Full=ATP-dependent protease subunit HslV
 gi|238687320|sp|A9R6C8|HSLV_YERPG RecName: Full=ATP-dependent protease subunit HslV
 gi|21956974|gb|AAM83887.1|AE013628_10 heat shock protein, proteasome-related peptidase subunit [Yersinia
           pestis KIM 10]
 gi|45434826|gb|AAS60387.1| heat shock protein [Yersinia pestis biovar Microtus str. 91001]
 gi|51587738|emb|CAH19338.1| heat shock protein [Yersinia pseudotuberculosis IP 32953]
 gi|108777555|gb|ABG20074.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Yersinia pestis Nepal516]
 gi|108778167|gb|ABG12225.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Yersinia pestis Antiqua]
 gi|115345932|emb|CAL18794.1| heat shock protein [Yersinia pestis CO92]
 gi|145212738|gb|ABP42145.1| heat shock protein [Yersinia pestis Pestoides F]
 gi|149290201|gb|EDM40278.1| heat shock protein [Yersinia pestis CA88-4125]
 gi|152962282|gb|ABS49743.1| ATP-dependent protease HslV [Yersinia pseudotuberculosis IP 31758]
 gi|162351738|gb|ABX85686.1| ATP-dependent protease HslV [Yersinia pestis Angola]
 gi|165915927|gb|EDR34535.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165919575|gb|EDR36908.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989654|gb|EDR41955.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205105|gb|EDR49585.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166963136|gb|EDR59157.1| ATP-dependent protease HslV [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048121|gb|EDR59529.1| ATP-dependent protease HslV [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055040|gb|EDR64839.1| ATP-dependent protease HslV [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169752844|gb|ACA70362.1| 20S proteasome A and B subunits [Yersinia pseudotuberculosis YPIII]
 gi|186696470|gb|ACC87099.1| 20S proteasome A and B subunits [Yersinia pseudotuberculosis PB1/+]
 gi|229678551|gb|EEO74656.1| peptidase component of the HslUV protease [Yersinia pestis
           Nepal516]
 gi|229690351|gb|EEO82405.1| peptidase component of the HslUV protease [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696325|gb|EEO86372.1| peptidase component of the HslUV protease [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229706668|gb|EEO92674.1| peptidase component of the HslUV protease [Yersinia pestis
           Pestoides A]
 gi|262360281|gb|ACY57002.1| ATP-dependent protease peptidase subunit [Yersinia pestis D106004]
 gi|262364228|gb|ACY60785.1| ATP-dependent protease peptidase subunit [Yersinia pestis D182038]
 gi|270337209|gb|EFA47986.1| ATP-dependent protease HslVU, peptidase subunit [Yersinia pestis
           KIM D27]
 gi|294352661|gb|ADE63002.1| ATP-dependent protease peptidase subunit [Yersinia pestis Z176003]
 gi|320013459|gb|ADV97030.1| peptidase component of the HslUV protease [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 174

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 101/172 (58%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+DG VVI GDGQV+LG TVMK NA+KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAARAL+ +T+  A +I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEELT 173


>gi|238798293|ref|ZP_04641777.1| ATP-dependent protease hslV [Yersinia mollaretii ATCC 43969]
 gi|238717840|gb|EEQ09672.1| ATP-dependent protease hslV [Yersinia mollaretii ATCC 43969]
          Length = 176

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 100/172 (58%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNQVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAARAL+ +T+  A +I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAARALLDNTELGARDIVEKSLSIAGDICIYTNRFQTIEELT 173


>gi|85711523|ref|ZP_01042581.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Idiomarina
           baltica OS145]
 gi|85694675|gb|EAQ32615.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Idiomarina
           baltica OS145]
          Length = 197

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 100/170 (58%), Positives = 129/170 (75%), Gaps = 1/170 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   V I GDGQVSLG TVMK NA+KVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 18  TTIVSVRRGDKVAIGGDGQVSLGNTVMKGNAKKVRRLYHDQVLAGFAGGTADAFTLFERF 77

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLEQ+   L+R++VELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PEN ++
Sbjct: 78  ESKLEQHQGNLMRAAVELAKDWRTDRALRRLEALLAVADKETSLIITGNGDVVQPENDLI 137

Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG YA +AA A++  T+ SA +I  KA++IA DICVYTN    +E 
Sbjct: 138 AIGSGGPYAQAAATAMLETTELSARDIVEKALTIAGDICVYTNGYQTIEE 187


>gi|183221726|ref|YP_001839722.1| ATP-dependent protease peptidase subunit [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
 gi|189911801|ref|YP_001963356.1| ATP-dependent protease peptidase subunit [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|259491391|sp|B0SCD1|HSLV_LEPBA RecName: Full=ATP-dependent protease subunit HslV
 gi|259491392|sp|B0SKV3|HSLV_LEPBP RecName: Full=ATP-dependent protease subunit HslV
 gi|167776477|gb|ABZ94778.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167780148|gb|ABZ98446.1| Heat shock protein, HslVU, proteasome-related peptidase subunit
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 177

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 139/174 (79%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +HATTIL+VRK+G + + GDGQVS+G TVMK  A+KVRRL  G +IAGFAGS+ADAFTL 
Sbjct: 4   IHATTILSVRKNGKIAVGGDGQVSMGNTVMKHTAKKVRRLYNGKVIAGFAGSAADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E  EKKL ++   + R++VELA++WRMD+ LR LEA++++ D   + +I+G GDV+ P++
Sbjct: 64  ELFEKKLIEHGGSVSRAAVELAREWRMDRMLRRLEALLIVCDANESFLISGTGDVISPDD 123

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           GV+AIGSGG++ALSAARAL+ +T    +EI  KAM+I ADIC+YTNHN+V+E L
Sbjct: 124 GVLAIGSGGNFALSAARALVENTDLDPKEIITKAMNITADICIYTNHNLVIEEL 177


>gi|91205632|ref|YP_537987.1| ATP-dependent protease peptidase subunit [Rickettsia bellii
           RML369-C]
 gi|157827343|ref|YP_001496407.1| ATP-dependent protease peptidase subunit [Rickettsia bellii OSU
           85-389]
 gi|122425542|sp|Q1RIB6|HSLV_RICBR RecName: Full=ATP-dependent protease subunit HslV
 gi|166222994|sp|A8GWX0|HSLV_RICB8 RecName: Full=ATP-dependent protease subunit HslV
 gi|91069176|gb|ABE04898.1| Heat shock protein HslV [Rickettsia bellii RML369-C]
 gi|157802647|gb|ABV79370.1| ATP-dependent protease peptidase subunit [Rickettsia bellii OSU
           85-389]
          Length = 182

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 104/180 (57%), Positives = 136/180 (75%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL ++K+  ++IA DGQVS G TV+K+ ARK+R +    IIAGFAGS+A
Sbjct: 1   MSDNLALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+LE K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD+   L++TG GD
Sbjct: 61  DGLALFEKLEVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRNHILILTGNGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPEN V AIGSGG +ALSAARAL       +AEEIA K+M+IAAD+CV++NHNI+ E 
Sbjct: 121 VVEPENNVAAIGSGGLFALSAARALMSYDNPLTAEEIALKSMNIAADLCVFSNHNIITEK 180


>gi|167040336|ref|YP_001663321.1| ATP-dependent protease peptidase subunit [Thermoanaerobacter sp.
           X514]
 gi|256750732|ref|ZP_05491617.1| 20S proteasome A and B subunits [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300914420|ref|ZP_07131736.1| 20S proteasome A and B subunits [Thermoanaerobacter sp. X561]
 gi|307724344|ref|YP_003904095.1| 20S proteasome subunits A/B [Thermoanaerobacter sp. X513]
 gi|238065944|sp|B0K1T7|HSLV_THEPX RecName: Full=ATP-dependent protease subunit HslV
 gi|166854576|gb|ABY92985.1| 20S proteasome, A and B subunits [Thermoanaerobacter sp. X514]
 gi|256750315|gb|EEU63334.1| 20S proteasome A and B subunits [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300889355|gb|EFK84501.1| 20S proteasome A and B subunits [Thermoanaerobacter sp. X561]
 gi|307581405|gb|ADN54804.1| 20S proteasome A and B subunits [Thermoanaerobacter sp. X513]
          Length = 176

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 90/175 (51%), Positives = 124/175 (70%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              TTI+ VRK   V +AGDGQ++ G  T++K  A+K+RRL  G +I GFAGS ADA TL
Sbjct: 2   FKGTTIIAVRKGAKVSVAGDGQITFGENTILKHGAKKIRRLYNGEVIVGFAGSVADALTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ++ E+KLEQY   L R++VELA++WR DK LR LEA+++  DK  TL+I+G G+V+EP+
Sbjct: 62  SQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAVDKKDTLLISGTGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             V+ IGSGG+Y   +A     +T    E+IA+KA+ IA+ ICVYTN+NI +ETL
Sbjct: 122 EDVIGIGSGGNYAMAAALALRYNTDLDTEDIAKKALEIASKICVYTNNNITVETL 176


>gi|121533769|ref|ZP_01665596.1| transcriptional regulator, Fis family [Thermosinus carboxydivorans
           Nor1]
 gi|121307760|gb|EAX48675.1| transcriptional regulator, Fis family [Thermosinus carboxydivorans
           Nor1]
          Length = 176

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 104/175 (59%), Positives = 132/175 (75%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ VR  G   IAGDGQV+ G  TVMK NA+KVRRL  G I+AGFAGS ADAFTL
Sbjct: 2   FHATTIVAVRHKGKTAIAGDGQVTFGGNTVMKHNAKKVRRLYHGKILAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
             + E KLE++   L+R++VELAK+WRMDK LR LEA++++ D    L+I+G G+V+EP+
Sbjct: 62  FGKFESKLEEFNGNLMRAAVELAKEWRMDKVLRRLEALLIVCDAQSMLIISGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG YAL+AARAL   +  SA EIAR+A+ IAA ICVYTN+ I +E L
Sbjct: 122 DGITAIGSGGPYALAAARALAKYSGLSAAEIAREALQIAASICVYTNNQITVEEL 176


>gi|89098651|ref|ZP_01171533.1| ATP-dependent protease peptidase subunit [Bacillus sp. NRRL
           B-14911]
 gi|89086613|gb|EAR65732.1| ATP-dependent protease peptidase subunit [Bacillus sp. NRRL
           B-14911]
          Length = 180

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 96/178 (53%), Positives = 133/178 (74%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + HATTI  V+ +G   +AGDGQV+ G   VMK  ARKVR+L  G +IAGFAGS ADAFT
Sbjct: 3   QFHATTIFAVQHNGKCAMAGDGQVTFGNAVVMKHTARKVRKLFNGKVIAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E +LE+Y   L R++VELAK+WR DK LR LEAM+++ +++  L+I+G G+V+EP
Sbjct: 63  LFELFESRLEEYNGNLQRAAVELAKEWRSDKVLRKLEAMLIVMNESDLLLISGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YAL+A R+L        +A+EIAR ++ +AA+ICVYTN NI++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRSLKKYAGEHLTAKEIARSSLEVAAEICVYTNENIIVEEL 180


>gi|15615027|ref|NP_243330.1| ATP-dependent protease peptidase subunit [Bacillus halodurans
           C-125]
 gi|11133069|sp|Q9KA26|HSLV_BACHD RecName: Full=ATP-dependent protease subunit HslV
 gi|10175084|dbj|BAB06183.1| beta-type subunit of the 20S proteasome [Bacillus halodurans C-125]
          Length = 180

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 93/178 (52%), Positives = 129/178 (72%), Gaps = 3/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI  +  +G   +AGDGQV+ G   VMK  ARKVR++  G ++AGFAGS ADAF
Sbjct: 3   MTFHATTIFAIHHNGKCAMAGDGQVTFGNAVVMKHTARKVRKIYHGKVLAGFAGSVADAF 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE++   L RS+VE+AK+WR DK LR LEAM+++ ++   L+++G G+V+E
Sbjct: 63  TLFEKFEAKLEEFNGNLQRSAVEVAKEWRSDKVLRRLEAMLIVMNEEHLLLVSGTGEVIE 122

Query: 130 PENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G++AIGSGG+YAL+A RAL     Q SA EIA+ A+  A DICVYTN  +++E L
Sbjct: 123 PDDGILAIGSGGNYALAAGRALKKKAPQLSAREIAQAALETAGDICVYTNDQLIVEEL 180


>gi|190571156|ref|YP_001975514.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|226704549|sp|B3CLU4|HSLV_WOLPP RecName: Full=ATP-dependent protease subunit HslV
 gi|190357428|emb|CAQ54862.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 184

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 120/180 (66%), Positives = 154/180 (85%), Gaps = 1/180 (0%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H + KM+ TTIL++R+D  VV+ GDGQVSLG TV+K+ ARKVRRL   ++IAGFAG++AD
Sbjct: 4   HDSSKMYGTTILSIRRDKNVVVIGDGQVSLGHTVIKSGARKVRRLSGDSVIAGFAGATAD 63

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GDV
Sbjct: 64  AFTLFERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDV 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           LEPE+G+ AIGSGG++ALSAA+AL+     S EEIA+KAM IAADICVYTNHN+++E ++
Sbjct: 124 LEPEDGIAAIGSGGNFALSAAKALIDVEGISIEEIAKKAMKIAADICVYTNHNLIIEKIE 183


>gi|116626380|ref|YP_828536.1| ATP-dependent protease peptidase subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|122251635|sp|Q01Q19|HSLV_SOLUE RecName: Full=ATP-dependent protease subunit HslV
 gi|116229542|gb|ABJ88251.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
           family T01B [Candidatus Solibacter usitatus Ellin6076]
          Length = 179

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 91/176 (51%), Positives = 129/176 (73%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TT++ VR+D  VV+AGDGQV+LG  V+K++ARK+RRL    I+AGFAGS+ADAF L
Sbjct: 4   KIRSTTVICVRRDNKVVMAGDGQVTLGGEVLKSSARKLRRLYNDKILAGFAGSTADAFAL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
             R E KLEQ+   L RS VELAK+WR D+ LR+LEA++L++D   T +++G GDV+EP+
Sbjct: 64  FSRFESKLEQFNGNLSRSVVELAKEWRTDRVLRHLEALLLVSDTKSTYLVSGNGDVIEPD 123

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G++AIGSGG +   +A   L +T+ SA  I  ++M IA +IC+YTN N+  E L+
Sbjct: 124 EGIVAIGSGGPFATAAATALLRNTKLSARRIVEESMKIAGEICIYTNQNVTFEELE 179


>gi|325525687|gb|EGD03447.1| ATP-dependent protease subunit HslV [Burkholderia sp. TJI49]
          Length = 178

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T+ S  +I  K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPRDIVEKSLEIAGDMCIYTNHNRIIETIE 178


>gi|170703230|ref|ZP_02894033.1| 20S proteasome A and B subunits [Burkholderia ambifaria IOP40-10]
 gi|170131863|gb|EDT00388.1| 20S proteasome A and B subunits [Burkholderia ambifaria IOP40-10]
          Length = 178

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T+ S  EI  K++ IA D+C+YTNHN ++ET++
Sbjct: 123 GGICAIGSGGAYAQAAARALAENTELSPREIVEKSLGIAGDMCIYTNHNRIIETIE 178


>gi|330818650|ref|YP_004362355.1| ATP-dependent protease peptidase subunit [Burkholderia gladioli
           BSR3]
 gi|327371043|gb|AEA62399.1| ATP-dependent protease peptidase subunit [Burkholderia gladioli
           BSR3]
          Length = 178

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 102/176 (57%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+    ++ GFAG +ADAF+L
Sbjct: 3   QYHGTTIVSVRRGEQVALGGDGQVTLGNIVMKGGARKVRRIYNNQVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ ADKT TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADKTTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA +AARAL  +T+ S  EI +KA++IA D+C+YTNH+ ++ET++
Sbjct: 123 GGICAIGSGGSYAQAAARALAENTELSPGEIVKKALTIAGDMCIYTNHSHIIETIE 178


>gi|332995305|gb|AEF05360.1| ATP-dependent protease subunit HslV [Alteromonas sp. SN2]
          Length = 174

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 99/172 (57%), Positives = 136/172 (79%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VV+AGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGNQVVMAGDGQVSLGNTVMKGNARKVRRLYHDKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PEN ++
Sbjct: 62  EAKLEAHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASFIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG+YA ++A AL+ +T+ +A+EIA K+++IA DICV+TNH+  ++ L 
Sbjct: 122 AIGSGGNYAQASAIALLENTELTAKEIAEKSLTIAGDICVFTNHSQTVDVLD 173


>gi|256828891|ref|YP_003157619.1| 20S proteasome subunits A and B [Desulfomicrobium baculatum DSM
           4028]
 gi|256578067|gb|ACU89203.1| 20S proteasome A and B subunits [Desulfomicrobium baculatum DSM
           4028]
          Length = 182

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 109/179 (60%), Positives = 138/179 (77%), Gaps = 2/179 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFT 70
           +M  TTIL V+ D  V +AGDGQV+LGQ +  K  ARKVRRL +  I+ GFAGS+ADAFT
Sbjct: 3   EMRGTTILAVKDDKGVSVAGDGQVTLGQAIAIKHGARKVRRLYRDRIVCGFAGSTADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KLE++   L+RSSVELAKDWR DKYLR LEAM+L+AD    L+++G GDV+EP
Sbjct: 63  LFEKFEAKLEEFGGNLVRSSVELAKDWRSDKYLRRLEAMLLVADAENILMLSGTGDVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           ++GV AIGSGG+YA+SAARAL   T  SAE+I RK+M+IAA+ICVYTN +I+ ET+   
Sbjct: 123 DDGVAAIGSGGAYAMSAARALRRHTDLSAEDIVRKSMAIAAEICVYTNDHIIFETVTRN 181


>gi|325272526|ref|ZP_08138898.1| ATP-dependent protease subunit HslV [Pseudomonas sp. TJI-51]
 gi|324102336|gb|EGB99810.1| ATP-dependent protease subunit HslV [Pseudomonas sp. TJI-51]
          Length = 176

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EGQLEKHQGHLIRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG+YA +AARAL++ T  SA EIA  A++IA DICV+TNHN+ +E   + D
Sbjct: 122 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 176


>gi|146291636|ref|YP_001182060.1| ATP-dependent protease peptidase subunit [Shewanella putrefaciens
           CN-32]
 gi|152998997|ref|YP_001364678.1| ATP-dependent protease peptidase subunit [Shewanella baltica OS185]
 gi|166222999|sp|A6WIH6|HSLV_SHEB8 RecName: Full=ATP-dependent protease subunit HslV
 gi|166223001|sp|A4Y2S8|HSLV_SHEPC RecName: Full=ATP-dependent protease subunit HslV
 gi|145563326|gb|ABP74261.1| 20S proteasome, A and B subunits [Shewanella putrefaciens CN-32]
 gi|151363615|gb|ABS06615.1| 20S proteasome A and B subunits [Shewanella baltica OS185]
          Length = 174

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 130/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NA+KVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   LLRS+VELAKDWR D+ LR LEAM+++AD   +L+ITG GDV++PE  ++
Sbjct: 62  EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEYDLV 121

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG+Y   +A   L +T+ SA EIA K+++IA DICV+TN    +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172


>gi|16800385|ref|NP_470653.1| ATP-dependent protease peptidase subunit [Listeria innocua
           Clip11262]
 gi|21759185|sp|Q92C74|HSLV_LISIN RecName: Full=ATP-dependent protease subunit HslV
 gi|16413790|emb|CAC96548.1| clpQ [Listeria innocua Clip11262]
 gi|313619211|gb|EFR90976.1| ATP-dependent protease HslVU, peptidase subunit [Listeria innocua
           FSL S4-378]
 gi|313623984|gb|EFR94083.1| ATP-dependent protease HslVU, peptidase subunit [Listeria innocua
           FSL J1-023]
          Length = 179

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 95/179 (53%), Positives = 130/179 (72%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++HATTI  V+ DG   +AGDGQV+LG   VMK  A+KVRRL    +IAGFAGS ADAF
Sbjct: 1   MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KL +Y   L R++VELA+ WR D  LR LEAM+++ DK   L+++G G+V+E
Sbjct: 61  TLFEKFEAKLNEYNGNLERAAVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120

Query: 130 PENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G++AIGSGG+YAL+A RAL         A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 179


>gi|304436893|ref|ZP_07396857.1| ATP-dependent protease HslVU [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370092|gb|EFM23753.1| ATP-dependent protease HslVU [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 179

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 101/179 (56%), Positives = 131/179 (73%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI+ V+KDG V IAGDGQV+ G+  +MKANARKVRRL  G I+AGFAGS ADAF
Sbjct: 1   MTFHATTIVAVKKDGKVAIAGDGQVTFGERAIMKANARKVRRLYHGKILAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE Y   L R++VELAKDWR DK LR LEA++L+AD+   L+I+G G+V+E
Sbjct: 61  TLFEKFEVKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADQDSILMISGNGEVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P+    AIGSGG +   +A   +  +   A  IA++++SIAADICVYTNH+I +E L+ 
Sbjct: 121 PDGDCTAIGSGGFFALAAARALVAHSTLDAPAIAKESLSIAADICVYTNHHITVEVLES 179


>gi|15892356|ref|NP_360070.1| ATP-dependent protease peptidase subunit [Rickettsia conorii str.
           Malish 7]
 gi|34580639|ref|ZP_00142119.1| heat shock protein HslV [Rickettsia sibirica 246]
 gi|157828308|ref|YP_001494550.1| ATP-dependent protease peptidase subunit [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165933014|ref|YP_001649803.1| ATP-dependent protease subunit HslV [Rickettsia rickettsii str.
           Iowa]
 gi|229586581|ref|YP_002845082.1| ATP-dependent protease peptidase subunit [Rickettsia africae ESF-5]
 gi|21759187|sp|Q92II7|HSLV_RICCN RecName: Full=ATP-dependent protease subunit HslV
 gi|166222996|sp|A8GRL7|HSLV_RICRS RecName: Full=ATP-dependent protease subunit HslV
 gi|189036235|sp|B0BX21|HSLV_RICRO RecName: Full=ATP-dependent protease subunit HslV
 gi|259491396|sp|C3PN29|HSLV_RICAE RecName: Full=ATP-dependent protease subunit HslV
 gi|15619503|gb|AAL02971.1| heat shock protein HslV [Rickettsia conorii str. Malish 7]
 gi|28262024|gb|EAA25528.1| heat shock protein HslV [Rickettsia sibirica 246]
 gi|157800789|gb|ABV76042.1| ATP-dependent protease peptidase subunit [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165908101|gb|ABY72397.1| ATP-dependent endopeptidase hsl proteolytic subunit [Rickettsia
           rickettsii str. Iowa]
 gi|228021631|gb|ACP53339.1| Heat shock protein HslV [Rickettsia africae ESF-5]
          Length = 182

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 103/180 (57%), Positives = 137/180 (76%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL ++K+  ++IA DGQVS G TV+K+ ARK+R +    IIAGFAGS+A
Sbjct: 1   MSDNLSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+L  K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++  L++TG GD
Sbjct: 61  DGLALFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPEN V AIGSGG +ALSAARAL       +AEEIA K+M+IAAD+CV++NHNI++E 
Sbjct: 121 VVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK 180


>gi|307728178|ref|YP_003905402.1| 20S proteasome A and subunit Bs [Burkholderia sp. CCGE1003]
 gi|307582713|gb|ADN56111.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1003]
          Length = 178

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  A+KVRR+  G ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDQVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AA+AL  +T  S  EI  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTALSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|229918621|ref|YP_002887267.1| ATP-dependent protease peptidase subunit [Exiguobacterium sp. AT1b]
 gi|229470050|gb|ACQ71822.1| 20S proteasome A and B subunits [Exiguobacterium sp. AT1b]
          Length = 182

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 96/181 (53%), Positives = 132/181 (72%), Gaps = 3/181 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  VR +G   ++GDGQV+ G   +MK  A+KVRRL  G ++AGFAGS ADAFTL
Sbjct: 2   FHATTIFAVRHNGQCAMSGDGQVTFGNAVIMKNKAKKVRRLYGGKVVAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE Y   L R++VELAK+WR DK LR LEA++++ D    L+++G G+V+EP+
Sbjct: 62  FEKFESKLEMYNGNLPRAAVELAKEWRGDKMLRQLEALLIVMDAEHLLLVSGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           +G++AIGSGG+YAL+A RAL+    + SAEEIAR A+ IA ++CVYTN  +++ET+    
Sbjct: 122 DGILAIGSGGNYALAAGRALVRHSAEKSAEEIARAALEIAGELCVYTNDQVIVETIGGAA 181

Query: 190 E 190
           E
Sbjct: 182 E 182


>gi|124002741|ref|ZP_01687593.1| ATP-dependent protease HslV [Microscilla marina ATCC 23134]
 gi|123991969|gb|EAY31356.1| ATP-dependent protease HslV [Microscilla marina ATCC 23134]
          Length = 178

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 102/176 (57%), Positives = 135/176 (76%), Gaps = 2/176 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+HATT+L +  +G V I  DGQ ++G TV K+N RK+R+L  GNI+AGFAGS+ADAFTL
Sbjct: 3   KIHATTVLAIVHNGEVAIGADGQATMGNTVAKSNVRKIRKLSDGNILAGFAGSTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +ER ++KL  Y   + R+++ELAKDWR D+YLR LEAM++ A K   LVI+G GDVLEP+
Sbjct: 63  IERFDEKLNAYGKNMKRAAIELAKDWRTDRYLRRLEAMLITASKDEVLVISGTGDVLEPD 122

Query: 132 NGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           NG+ +IGSG  YA SAA AL    TQ +AEE+ ++++ IAADIC+YTNHNI+LE L
Sbjct: 123 NGIASIGSGSMYAQSAATALKKHSTQMTAEEMVKESLHIAADICIYTNHNIILEKL 178


>gi|195953683|ref|YP_002121973.1| ATP-dependent protease peptidase subunit [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195933295|gb|ACG57995.1| 20S proteasome A and B subunits [Hydrogenobaculum sp. Y04AAS1]
          Length = 181

 Score =  172 bits (437), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 90/174 (51%), Positives = 126/174 (72%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +HATT++ VRK+G   I  DGQV+LG  ++K +A+K RRL KG ++ GFAG +AD   L+
Sbjct: 8   LHATTVIAVRKNGQTAIGSDGQVTLGSQILKHSAKKTRRLHKGTVLVGFAGGAADGLALM 67

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLE++   L R+SVELAK+WR D+YLR LEA+++  DK    +++G GDV+EP+ 
Sbjct: 68  ERLEGKLEEHRGNLARASVELAKEWRTDRYLRRLEAVLIACDKESMFLLSGNGDVIEPDE 127

Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            ++A GSGG +A SAA+AL   T  SAEEI + ++ IA+DICVYTN +  +E L
Sbjct: 128 PILATGSGGDFARSAAKALYYHTDKSAEEIVKISLDIASDICVYTNKHFSIELL 181


>gi|163781960|ref|ZP_02176960.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159883180|gb|EDP76684.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 176

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 102/176 (57%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++  +TTIL VRK+G  VI GDGQV++G +V+K +ARK+RRL K  +I GFAGS+AD   
Sbjct: 1   MESRSTTILAVRKNGETVIGGDGQVTVGSSVIKHSARKIRRLYKEQVIVGFAGSAADGLA 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L+ERLE+KLE++   LLR+SVELAKDWRMDKYLR LEA++L  D+   L+++G GD++EP
Sbjct: 61  LMERLEQKLEEFRGNLLRASVELAKDWRMDKYLRRLEALLLAVDREHMLLLSGNGDIIEP 120

Query: 131 ENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +  V+ IGSGG YA SAA AL   T  SAEEI RK++ IA++ICVYTN ++V+E L
Sbjct: 121 DEPVLGIGSGGDYARSAALALYRNTDMSAEEIVRKSLEIASEICVYTNSSLVIEKL 176


>gi|304414793|ref|ZP_07395752.1| ATP-dependent protease peptidase subunit [Candidatus Regiella
           insecticola LSR1]
 gi|304283145|gb|EFL91558.1| ATP-dependent protease peptidase subunit [Candidatus Regiella
           insecticola LSR1]
          Length = 181

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 98/172 (56%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+D  VV+ GDGQV+LG TVMK NA KVR L K  +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRDNEVVMGGDGQVTLGNTVMKKNACKVRFLYKNQVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PE+ ++
Sbjct: 62  EKKLEAHQGHLTKAAVELAKDWRTDRMLRRLEALLAVADQNASLIITGNGDVIQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA S+ARAL+ +T+ SA++I  K+++IA DIC+YTN    ++ LK
Sbjct: 122 AIGSGGPYAQSSARALLENTKLSAKKIVEKSLNIAGDICIYTNRCQTIKELK 173


>gi|116328184|ref|YP_797904.1| ATP-dependent protease peptidase subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116330908|ref|YP_800626.1| ATP-dependent protease peptidase subunit [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|47605711|sp|Q8GQU1|HSLV_LEPBO RecName: Full=ATP-dependent protease subunit HslV
 gi|122281339|sp|Q04TA2|HSLV_LEPBJ RecName: Full=ATP-dependent protease subunit HslV
 gi|122284025|sp|Q051M4|HSLV_LEPBL RecName: Full=ATP-dependent protease subunit HslV
 gi|25814818|gb|AAN75635.1|AF270500_1 HlsV [Leptospira borgpetersenii]
 gi|116120928|gb|ABJ78971.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116124597|gb|ABJ75868.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 180

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 101/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TTIL VRK G V I GDGQVS+G TVMK  A+K+RRL  G I++GFAGS+ADAFTL
Sbjct: 5   KIRSTTILCVRKSGKVAIGGDGQVSMGNTVMKNTAKKIRRLYDGKILSGFAGSAADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  EKK++++   L RS+VELA++WR D+ LR LEA++++ADK  + +I+G GDV+ P+
Sbjct: 65  FELFEKKVQEFGGSLSRSAVELAREWRTDRMLRKLEALLIVADKEESFLISGTGDVISPD 124

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            GV+AIGSGGSYAL+AA+AL   T  SA EI   +M IAA+IC+YTN +I LE +
Sbjct: 125 EGVIAIGSGGSYALAAAKALYDHTDLSAREIVESSMKIAANICIYTNDHITLEEI 179


>gi|222475431|ref|YP_002563848.1| heat shock protein (hslV) [Anaplasma marginale str. Florida]
 gi|222419569|gb|ACM49592.1| heat shock protein (hslV) [Anaplasma marginale str. Florida]
          Length = 210

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 109/191 (57%), Positives = 152/191 (79%), Gaps = 7/191 (3%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           +VM  +  +  M+ TTIL +R+ G V+IAGDGQVS+G  +MK +A+K++RL   ++I GF
Sbjct: 20  LVMSHR-DSYTMYGTTILCIRQGGSVIIAGDGQVSMGSAIMKTSAKKIKRLAGDSVITGF 78

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AG++ADAFTL ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++L+I
Sbjct: 79  AGATADAFTLFERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLII 138

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARAL------MSTQNSAEEIARKAMSIAADICVY 175
           +G GDVLEPENG+ AIGSGG++ALSAARAL      +S   + E IA  AM++A++ICVY
Sbjct: 139 SGGGDVLEPENGIAAIGSGGNFALSAARALCAARDELSLDMTLEYIATAAMAVASEICVY 198

Query: 176 TNHNIVLETLK 186
           TN+NI++E ++
Sbjct: 199 TNNNIIMEKIE 209


>gi|51473514|ref|YP_067271.1| ATP-dependent protease peptidase subunit [Rickettsia typhi str.
           Wilmington]
 gi|85542207|sp|Q68X53|HSLV_RICTY RecName: Full=ATP-dependent protease subunit HslV
 gi|51459826|gb|AAU03789.1| heat shock protein ATP dependent protease HslV [Rickettsia typhi
           str. Wilmington]
          Length = 182

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 103/180 (57%), Positives = 137/180 (76%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL ++K+  ++IA DGQVS G TV+K+ ARK+R +    II GFAGS+A
Sbjct: 1   MSDNLALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+LE K+EQY + LLRS+VELAKDWR DKYLR LEAM+++AD++  L++TG GD
Sbjct: 61  DGLALFEKLEIKIEQYNSNLLRSAVELAKDWRNDKYLRRLEAMMIVADRSHILILTGNGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPEN + AIGSGG +ALSAARAL       +AEEIA K+M+IAAD+CV++NHNI++E 
Sbjct: 121 VIEPENNIAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK 180


>gi|295675158|ref|YP_003603682.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1002]
 gi|295435001|gb|ADG14171.1| 20S proteasome A and B subunits [Burkholderia sp. CCGE1002]
          Length = 178

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  A+KVRR+  G ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGNKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLITADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AA+AL  +T+ S  +I  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTELSPRDIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|205354332|ref|YP_002228133.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|238065937|sp|B5RF79|HSLV_SALG2 RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Heat shock protein HslV
 gi|205274113|emb|CAR39122.1| heat shock protein [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|326629457|gb|EGE35800.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 176

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA +AARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L   
Sbjct: 122 AIGSGGPYARAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEELTAK 175


>gi|292670830|ref|ZP_06604256.1| heat shock protein HslVU [Selenomonas noxia ATCC 43541]
 gi|292647451|gb|EFF65423.1| heat shock protein HslVU [Selenomonas noxia ATCC 43541]
          Length = 182

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 100/179 (55%), Positives = 129/179 (72%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI+ V+K   V +AGDGQV+ G+  +MKANARKVRRL  G I+AGFAGS ADAF
Sbjct: 4   MIFHATTIVAVKKGNKVAVAGDGQVTFGERAIMKANARKVRRLYHGKILAGFAGSVADAF 63

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE Y   L R++VELAKDWR DK LR LEA++L+AD++  L+I+G G+V+E
Sbjct: 64  TLFEKFEVKLESYSGNLQRAAVELAKDWRTDKILRKLEALLLVADQSSILMISGNGEVIE 123

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P+    AIGSGG +   +A      +   A  IA++A+SIAADICVYTNHNI +E L+ 
Sbjct: 124 PDGDCTAIGSGGFFALAAARALTAHSDMDASAIAKEALSIAADICVYTNHNITVEVLES 182


>gi|313673478|ref|YP_004051589.1| hslv component of hsluv peptidase [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312940234|gb|ADR19426.1| HslV component of HslUV peptidase [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 175

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 96/173 (55%), Positives = 127/173 (73%), Gaps = 1/173 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TT++ V+ +    I  DGQV+ G TV+K NA+K+RRL  G I+ GFAGS+ADAFTL+
Sbjct: 2   FEGTTVICVKTNDKTAIGADGQVTFGHTVLKNNAKKIRRLYNGEIVCGFAGSTADAFTLI 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER EKKL ++  QLLRS VELAKDWR DKYL++LEAM++ A+K    +ITG GDV+EP++
Sbjct: 62  ERFEKKLNEHGGQLLRSCVELAKDWRTDKYLKSLEAMMIAANKDSMYIITGNGDVVEPQH 121

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           G+ AIGSGG YA +AA AL  +T   A EI +KA+ IA +IC+YTN  I++E 
Sbjct: 122 GIAAIGSGGPYAFAAAYALKNNTDLDATEIVKKALDIAGEICIYTNKEIIVEE 174


>gi|189501499|ref|YP_001957216.1| ATP-dependent protease peptidase subunit [Candidatus Amoebophilus
           asiaticus 5a2]
 gi|238692319|sp|B3EU68|HSLV_AMOA5 RecName: Full=ATP-dependent protease subunit HslV
 gi|189496940|gb|ACE05487.1| 20S proteasome A and B subunits [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 179

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 89/178 (50%), Positives = 130/178 (73%), Gaps = 2/178 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
            +K+ +TT++ V  +  V I  DGQ ++G TV+K N  K+R+L  G ++ GFAGS+ADAF
Sbjct: 1   MLKIKSTTVIAVMHNNEVAIGADGQATMGSTVVKGNVNKIRKLLDGKVLTGFAGSTADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TLL+R ++KL++Y   + RS++ELAKDWR D+YLR LEAM++  +K   L+I+G GDV+E
Sbjct: 61  TLLDRFDEKLQRYFGHMKRSAIELAKDWRTDRYLRRLEAMLIAVNKEELLLISGTGDVIE 120

Query: 130 PENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P+NG++ IGSG  YA SAA AL       +AEEI R++++IAADIC+YTN N+ +E +
Sbjct: 121 PDNGIVTIGSGSLYAESAAIALKKHAPHLTAEEIVRESLTIAADICIYTNDNLTIEKI 178


>gi|303248942|ref|ZP_07335189.1| 20S proteasome A and B subunits [Desulfovibrio fructosovorans JJ]
 gi|302489665|gb|EFL49601.1| 20S proteasome A and B subunits [Desulfovibrio fructosovorans JJ]
          Length = 179

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 101/179 (56%), Positives = 130/179 (72%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           + +  TTIL VR D  V +AGDGQV+LGQ+V MK  ARKVRR+ +  ++ GFAGS+ADAF
Sbjct: 1   MDLRGTTILAVRTDAGVAVAGDGQVTLGQSVAMKHGARKVRRIYQDKVVIGFAGSTADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER E KLE++   L+R+SVELAKDWR DKYLR LEAM+++AD    L+++G GDV+E
Sbjct: 61  TLFERFEAKLEEFSGNLVRASVELAKDWRKDKYLRRLEAMLIVADAGNVLLLSGNGDVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P++GV AIGSGG Y   +A   L +T     EI  KAM IA++ICVYTN  IV+ET+  
Sbjct: 121 PDDGVAAIGSGGPYALAAARALLRNTDMGPREIVEKAMGIASEICVYTNDRIVVETIDR 179


>gi|238926945|ref|ZP_04658705.1| T01 family HslU component of HslUV peptidase [Selenomonas flueggei
           ATCC 43531]
 gi|238885179|gb|EEQ48817.1| T01 family HslU component of HslUV peptidase [Selenomonas flueggei
           ATCC 43531]
          Length = 179

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 100/179 (55%), Positives = 131/179 (73%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI+ V+KDG V +AGDGQV+ G+  +MKANARKVRRL  G I+AGFAGS ADAF
Sbjct: 1   MTFHATTIVAVKKDGKVAVAGDGQVTFGERAIMKANARKVRRLYHGKILAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE Y   L R++VELAKDWR DK LR LEA++L+AD+   L+I+G G+V+E
Sbjct: 61  TLFEKFEVKLESYSGNLQRAAVELAKDWRTDKVLRKLEALLLVADQDSILMISGNGEVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P+    AIGSGG +   +A   +  +   A  IA++++SIAADICVYTNH+I +E L+ 
Sbjct: 121 PDGDCTAIGSGGFFALAAARALVAHSALDAPAIAKESLSIAADICVYTNHHITVEVLES 179


>gi|313674855|ref|YP_004052851.1| ATP dependent peptidase codwx, codw component [Marivirga tractuosa
           DSM 4126]
 gi|312941553|gb|ADR20743.1| ATP dependent peptidase CodWX, CodW component [Marivirga tractuosa
           DSM 4126]
          Length = 180

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 93/177 (52%), Positives = 129/177 (72%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TT+  V   G V I  DGQ ++G TV K+N +K+R+L  G I+ GFAGS+ADAF L
Sbjct: 3   KIRSTTVCAVVHKGQVAIGADGQATMGNTVAKSNVKKIRKLQDGKIVTGFAGSTADAFNL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LE+ ++KL  +   + RS++ELAK+WR D+YLR LEAM+++ADK   L+I+G GDVLEP+
Sbjct: 63  LEKFDEKLNAFGGNMKRSAIELAKEWRTDRYLRKLEAMMIVADKDEVLIISGTGDVLEPD 122

Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           N +  IGSG  YA SAA AL      + SAE+I R+++ IAADIC+YTNHN+V+ET+
Sbjct: 123 NQIATIGSGSMYAQSAATALKKHAGDKLSAEDIVRESLHIAADICIYTNHNLVVETI 179


>gi|239947567|ref|ZP_04699320.1| ATP-dependent protease HslVU, peptidase subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239921843|gb|EER21867.1| ATP-dependent protease HslVU, peptidase subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 182

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 103/180 (57%), Positives = 138/180 (76%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL ++K+  ++IA DGQVS G TV+K+ ARK+R +    IIAGFAGS+A
Sbjct: 1   MSDNLALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+LE ++EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++  L++TG GD
Sbjct: 61  DGLALFEKLEVRIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPEN V AIGSGG +ALSAARAL       +AEEIA K+M+IAAD+CV++NHNI++E 
Sbjct: 121 VVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK 180


>gi|16803318|ref|NP_464803.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           EGD-e]
 gi|46907505|ref|YP_013894.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47097539|ref|ZP_00235076.1| ATP-dependent protease HslV [Listeria monocytogenes str. 1/2a
           F6854]
 gi|116872711|ref|YP_849492.1| ATP-dependent protease peptidase subunit [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|217964579|ref|YP_002350257.1| ATP-dependent protease HslV [Listeria monocytogenes HCC23]
 gi|224499051|ref|ZP_03667400.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           Finland 1988]
 gi|226223881|ref|YP_002757988.1| beta-type subunit of the 20S proteasome [Listeria monocytogenes
           Clip81459]
 gi|254824661|ref|ZP_05229662.1| ATP-dependent protease hslV [Listeria monocytogenes FSL J1-194]
 gi|254828641|ref|ZP_05233328.1| ATP-dependent protease hslV [Listeria monocytogenes FSL N3-165]
 gi|254829965|ref|ZP_05234620.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           10403S]
 gi|254852668|ref|ZP_05242016.1| clpQ [Listeria monocytogenes FSL R2-503]
 gi|254898557|ref|ZP_05258481.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           J0161]
 gi|254911952|ref|ZP_05261964.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           J2818]
 gi|254932405|ref|ZP_05265764.1| hslV [Listeria monocytogenes HPB2262]
 gi|254936279|ref|ZP_05267976.1| hslV [Listeria monocytogenes F6900]
 gi|254994003|ref|ZP_05276193.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           FSL J2-064]
 gi|255016910|ref|ZP_05289036.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           FSL F2-515]
 gi|255026830|ref|ZP_05298816.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           FSL J2-003]
 gi|255520260|ref|ZP_05387497.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           FSL J1-175]
 gi|284801663|ref|YP_003413528.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           08-5578]
 gi|284994805|ref|YP_003416573.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           08-5923]
 gi|290894168|ref|ZP_06557139.1| hslV protein [Listeria monocytogenes FSL J2-071]
 gi|300765314|ref|ZP_07075298.1| ATP-dependent protease HslV [Listeria monocytogenes FSL N1-017]
 gi|315282102|ref|ZP_07870588.1| ATP-dependent protease HslVU, peptidase subunit [Listeria marthii
           FSL S4-120]
 gi|21759170|sp|Q8Y7J9|HSLV_LISMO RecName: Full=ATP-dependent protease subunit HslV
 gi|85542204|sp|Q720E3|HSLV_LISMF RecName: Full=ATP-dependent protease subunit HslV
 gi|123463736|sp|A0AI81|HSLV_LISW6 RecName: Full=ATP-dependent protease subunit HslV
 gi|254802416|sp|B8DG53|HSLV_LISMH RecName: Full=ATP-dependent protease subunit HslV
 gi|259491393|sp|C1L2I6|HSLV_LISMC RecName: Full=ATP-dependent protease subunit HslV
 gi|16410694|emb|CAC99356.1| clpQ [Listeria monocytogenes EGD-e]
 gi|46880773|gb|AAT04071.1| ATP-dependent protease HslV [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47014087|gb|EAL05083.1| ATP-dependent protease HslV [Listeria monocytogenes str. 1/2a
           F6854]
 gi|116741589|emb|CAK20713.1| ATP-dependent protease [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|217333849|gb|ACK39643.1| ATP-dependent protease HslV [Listeria monocytogenes HCC23]
 gi|225876343|emb|CAS05052.1| Putative beta-type subunit of the 20S proteasome [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258601040|gb|EEW14365.1| ATP-dependent protease hslV [Listeria monocytogenes FSL N3-165]
 gi|258605986|gb|EEW18594.1| clpQ [Listeria monocytogenes FSL R2-503]
 gi|258608868|gb|EEW21476.1| hslV [Listeria monocytogenes F6900]
 gi|284057225|gb|ADB68166.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           08-5578]
 gi|284060272|gb|ADB71211.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           08-5923]
 gi|290556298|gb|EFD89841.1| hslV protein [Listeria monocytogenes FSL J2-071]
 gi|293583962|gb|EFF95994.1| hslV [Listeria monocytogenes HPB2262]
 gi|293589914|gb|EFF98248.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           J2818]
 gi|293593900|gb|EFG01661.1| ATP-dependent protease hslV [Listeria monocytogenes FSL J1-194]
 gi|300513997|gb|EFK41060.1| ATP-dependent protease HslV [Listeria monocytogenes FSL N1-017]
 gi|307570857|emb|CAR84036.1| ATP-dependent Clp protease, peptidase subunit [Listeria
           monocytogenes L99]
 gi|313609075|gb|EFR84789.1| ATP-dependent protease HslVU, peptidase subunit [Listeria
           monocytogenes FSL F2-208]
 gi|313614254|gb|EFR87912.1| ATP-dependent protease HslVU, peptidase subunit [Listeria marthii
           FSL S4-120]
 gi|313633458|gb|EFS00283.1| ATP-dependent protease HslVU, peptidase subunit [Listeria seeligeri
           FSL N1-067]
 gi|313638153|gb|EFS03410.1| ATP-dependent protease HslVU, peptidase subunit [Listeria seeligeri
           FSL S4-171]
 gi|328468567|gb|EGF39567.1| ATP-dependent protease subunit HslV [Listeria monocytogenes 1816]
 gi|328475122|gb|EGF45906.1| ATP-dependent protease subunit HslV [Listeria monocytogenes 220]
 gi|332311723|gb|EGJ24818.1| ATP-dependent protease subunit HslV [Listeria monocytogenes str.
           Scott A]
          Length = 179

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 96/179 (53%), Positives = 130/179 (72%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++HATTI  V+ DG   +AGDGQV+LG   VMK  A+KVRRL    +IAGFAGS ADAF
Sbjct: 1   MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KL +Y   L R+SVELA+ WR D  LR LEAM+++ DK   L+++G G+V+E
Sbjct: 61  TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120

Query: 130 PENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G++AIGSGG+YAL+A RAL         A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 179


>gi|261407989|ref|YP_003244230.1| ATP-dependent protease peptidase subunit [Paenibacillus sp.
           Y412MC10]
 gi|315648142|ref|ZP_07901243.1| ATP-dependent protease peptidase subunit [Paenibacillus vortex
           V453]
 gi|329929347|ref|ZP_08283100.1| ATP-dependent protease HslVU, peptidase subunit [Paenibacillus sp.
           HGF5]
 gi|261284452|gb|ACX66423.1| 20S proteasome A and B subunits [Paenibacillus sp. Y412MC10]
 gi|315276788|gb|EFU40131.1| ATP-dependent protease peptidase subunit [Paenibacillus vortex
           V453]
 gi|328936716|gb|EGG33159.1| ATP-dependent protease HslVU, peptidase subunit [Paenibacillus sp.
           HGF5]
          Length = 180

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 97/178 (54%), Positives = 133/178 (74%), Gaps = 3/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI  VR +G   IAGDGQV+ G   VMK  A+KVRRL +G ++AGFAGS ADA 
Sbjct: 3   MTFHATTICAVRHNGTAAIAGDGQVTFGESVVMKQTAKKVRRLYRGQVVAGFAGSVADAI 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE++   L R++VELAKDWR D+ LR LEA++++ DKT  L+I+G G+++E
Sbjct: 63  TLFEKFEGKLEEHHGNLQRAAVELAKDWRQDRVLRKLEALMIVMDKTGMLLISGGGEIIE 122

Query: 130 PENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++ V+AIGSGG++ALSA RAL        A++IAR+A+ IA+++CVYTN NI++E L
Sbjct: 123 PDDDVLAIGSGGNFALSAGRALKRHAGHMEAKDIAREALQIASEVCVYTNSNIIVEEL 180


>gi|56964040|ref|YP_175771.1| ATP-dependent protease peptidase subunit [Bacillus clausii KSM-K16]
 gi|85542195|sp|Q5WFQ0|HSLV_BACSK RecName: Full=ATP-dependent protease subunit HslV
 gi|56910283|dbj|BAD64810.1| ATP-dependent protease HslVU (ClpYQ) peptidase subunit [Bacillus
           clausii KSM-K16]
          Length = 181

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 99/177 (55%), Positives = 126/177 (71%), Gaps = 3/177 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  +  +G   +AGDGQV+ G   VMK  ARKVRRL   N++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAIAHNGGFAMAGDGQVTFGNAVVMKHTARKVRRLYHNNVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L R+SVELAK+WR D+ LR LEAM+++ DK   L+I+G G+V++P+
Sbjct: 64  FEKFEAKLEEYNGNLQRASVELAKEWRSDRVLRKLEAMLIVMDKQALLLISGTGEVIQPD 123

Query: 132 NGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +G++AIGSGG+YALSA RAL       SA EIA  A+  A +ICVYTN  IV+E L 
Sbjct: 124 DGILAIGSGGNYALSAGRALKRHAPGLSAREIAVAALETAGEICVYTNDQIVVEELT 180


>gi|311086300|gb|ADP66382.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
 gi|311086874|gb|ADP66955.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087464|gb|ADP67544.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
 gi|311087949|gb|ADP68028.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           JF98 (Acyrthosiphon pisum)]
          Length = 176

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 97/171 (56%), Positives = 131/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR    VVI GDGQ +LG T+MK+N +K+R L    +IAGFAG +ADAFTL E  
Sbjct: 2   TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           +KKL  Y  QL R+++ELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PE+ ++
Sbjct: 62  DKKLAMYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGGSYA S+ARAL+ +T   A +I RK+++IAA+IC+YTNHN  ++ L
Sbjct: 122 AIGSGGSYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 172


>gi|238650767|ref|YP_002916622.1| ATP-dependent protease peptidase subunit [Rickettsia peacockii str.
           Rustic]
 gi|259491397|sp|C4K1X3|HSLV_RICPU RecName: Full=ATP-dependent protease subunit HslV
 gi|238624865|gb|ACR47571.1| ATP-dependent protease peptidase subunit [Rickettsia peacockii str.
           Rustic]
          Length = 182

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 102/180 (56%), Positives = 136/180 (75%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL ++K+  ++IA DGQVS G TV+K+ ARK+R +    IIAGFAGS+A
Sbjct: 1   MSDNLSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+L  K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++  L++TG GD
Sbjct: 61  DGLALFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPE  V AIGSGG +ALSAARAL       +AEEIA K+M+IAAD+CV++NHNI++E 
Sbjct: 121 VVEPEKNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK 180


>gi|229587960|ref|YP_002870079.1| ATP-dependent protease peptidase subunit [Pseudomonas fluorescens
           SBW25]
 gi|312958528|ref|ZP_07773048.1| ATP-dependent protease [Pseudomonas fluorescens WH6]
 gi|259491395|sp|C3KAH1|HSLV_PSEFS RecName: Full=ATP-dependent protease subunit HslV
 gi|229359826|emb|CAY46676.1| ATP-dependent protease [Pseudomonas fluorescens SBW25]
 gi|311287071|gb|EFQ65632.1| ATP-dependent protease [Pseudomonas fluorescens WH6]
          Length = 176

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL  G ++AGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG YA +AA AL+  T  SA EI   A+ IA DICV+TNHN  +E   + +
Sbjct: 122 AMGSGGGYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHNQTIEEQDLAE 176


>gi|15604187|ref|NP_220702.1| ATP-dependent protease peptidase subunit [Rickettsia prowazekii
           str. Madrid E]
 gi|11133247|sp|Q9ZDK9|HSLV_RICPR RecName: Full=ATP-dependent protease subunit HslV
 gi|3860879|emb|CAA14779.1| HEAT SHOCK PROTEIN HSLV (hslV) [Rickettsia prowazekii]
 gi|292571920|gb|ADE29835.1| Heat shock protein HslV [Rickettsia prowazekii Rp22]
          Length = 182

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 104/180 (57%), Positives = 135/180 (75%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 +H TTIL ++K   ++IA DGQVS G TV+K+ ARK+R +    II GFAGS+A
Sbjct: 1   MSDNFALHGTTILCLKKKEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIVGFAGSTA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+LE K+EQY + LLRS+VELAKDWR DKYLR LEAM+++AD++  L++TG GD
Sbjct: 61  DGLALFEKLEIKIEQYNSNLLRSAVELAKDWRNDKYLRRLEAMMIVADRSHILILTGNGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPEN V AIGSGG +ALSAARAL       +AEEIA K+M+IAAD+CV++NHNI++E 
Sbjct: 121 VIEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK 180


>gi|146305570|ref|YP_001186035.1| ATP-dependent protease peptidase subunit [Pseudomonas mendocina
           ymp]
 gi|330501485|ref|YP_004378354.1| ATP-dependent protease peptidase subunit [Pseudomonas mendocina
           NK-01]
 gi|166222990|sp|A4XPN7|HSLV_PSEMY RecName: Full=ATP-dependent protease subunit HslV
 gi|145573771|gb|ABP83303.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Pseudomonas mendocina ymp]
 gi|328915771|gb|AEB56602.1| ATP-dependent protease peptidase subunit [Pseudomonas mendocina
           NK-01]
          Length = 176

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 103/175 (58%), Positives = 138/175 (78%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G ++AGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE G++
Sbjct: 62  EGQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEEGLI 121

Query: 136 AIGSGGSYALSAARA-LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG++A +AARA LM T  SA E+A+ A+ IA DICV+TNH+  +E L   +
Sbjct: 122 AMGSGGNFAQAAARALLMKTDLSALEVAQTALGIAGDICVFTNHHQTIEELDAAE 176


>gi|152978033|ref|YP_001343662.1| ATP-dependent protease peptidase subunit [Actinobacillus
           succinogenes 130Z]
 gi|171472944|sp|A6VL80|HSLV_ACTSZ RecName: Full=ATP-dependent protease subunit HslV
 gi|150839756|gb|ABR73727.1| 20S proteasome A and B subunits [Actinobacillus succinogenes 130Z]
          Length = 173

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 97/172 (56%), Positives = 131/172 (76%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRKDG V I GDGQ +LG +V K   RKVRR  KG ++ GFAGS+ADAF LLE  
Sbjct: 2   TTIVCVRKDGKVAIGGDGQATLGNSVEKGTVRKVRRTYKGKVVTGFAGSTADAFILLELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++S+VELAK+WR ++ LR LEAM+++AD+T  L+I+G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLVKSAVELAKEWRTERSLRRLEAMMIVADETDFLLISGSGDVIEPEFDVL 121

Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG+YA SAA AL+ T+   +A EI ++A+++A DI +YTNHN ++E +
Sbjct: 122 AIGSGGNYAKSAALALLRTENNLTAVEIVKEALTVAGDIDIYTNHNHIIEEI 173


>gi|332159731|ref|YP_004296308.1| ATP-dependent protease peptidase subunit [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318603862|emb|CBY25360.1| ATP-dependent protease HslV [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325663961|gb|ADZ40605.1| ATP-dependent protease peptidase subunit [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
          Length = 174

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 101/172 (58%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL    IIAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNDKIIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAARAL+ +T+  A +I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEELT 173


>gi|315125399|ref|YP_004067402.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas sp.
           SM9913]
 gi|315013912|gb|ADT67250.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas sp.
           SM9913]
          Length = 172

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 102/171 (59%), Positives = 134/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+D  VVI GDGQVSLG TVMK NARKVRRL  G +IAGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRDDKVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG++A SAA AL+ +T  SA EI  K+++IA +ICV+TN+   +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGNICVFTNNFQTIEEL 172


>gi|91781466|ref|YP_556672.1| ATP-dependent protease peptidase subunit [Burkholderia xenovorans
           LB400]
 gi|296161396|ref|ZP_06844203.1| 20S proteasome A and B subunits [Burkholderia sp. Ch1-1]
 gi|123169128|sp|Q146W9|HSLV_BURXL RecName: Full=ATP-dependent protease subunit HslV
 gi|91685420|gb|ABE28620.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Burkholderia xenovorans LB400]
 gi|295888382|gb|EFG68193.1| 20S proteasome A and B subunits [Burkholderia sp. Ch1-1]
          Length = 178

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  A+KVRR+  G ++ GFAG +ADAF+L
Sbjct: 3   QFHGTTIVSVRRGDKVALGGDGQVTLGNIVMKGGAKKVRRIYNGKVMVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD T TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADATTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AA+AL  +T+ S  EI  K++ IA D+C+YTNHN V+ET++
Sbjct: 123 GGICAIGSGGAYAQAAAKALADNTELSPREIVEKSLEIAGDMCIYTNHNRVIETIE 178


>gi|258620454|ref|ZP_05715492.1| ATP-dependent protease HslV [Vibrio mimicus VM573]
 gi|258625667|ref|ZP_05720546.1| ATP-dependent protease HslV [Vibrio mimicus VM603]
 gi|258581905|gb|EEW06775.1| ATP-dependent protease HslV [Vibrio mimicus VM603]
 gi|258587333|gb|EEW12044.1| ATP-dependent protease HslV [Vibrio mimicus VM573]
          Length = 177

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 99/168 (58%), Positives = 131/168 (77%), Gaps = 1/168 (0%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +R++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER E KL+
Sbjct: 1   MRRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQ 60

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
            +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSG
Sbjct: 61  MHQGHLTKAAVELAKDWRSDRALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSG 120

Query: 141 GSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           G+YA +AA AL+ +T   A  IA KA++IA DICV+TNHN  +E L++
Sbjct: 121 GNYAQAAAIALLENTDLDARTIAEKALNIAGDICVFTNHNHTIEELEI 168


>gi|238898391|ref|YP_002924072.1| peptidase component of the HslUV protease [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|259491390|sp|C4K5T1|HSLV_HAMD5 RecName: Full=ATP-dependent protease subunit HslV
 gi|229466150|gb|ACQ67924.1| peptidase component of the HslUV protease [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 178

 Score =  172 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 97/174 (55%), Positives = 132/174 (75%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VVI GDGQV+LG TVMK NA+KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRHNHVVIGGDGQVTLGNTVMKGNAKKVRRLHHDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+    QL +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  EAKLKLCSGQLTKAAVEMAKDWRTDRMLRRLEALLAVADETASLIITGNGDVIQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG YA ++ARAL+ +T  SA EI  K+++IA +IC+YTN    +E LK+ 
Sbjct: 122 AIGSGGPYAQASARALLENTNLSAREIVEKSLTIAGNICIYTNQYPTIEELKIK 175


>gi|226227911|ref|YP_002762017.1| ATP-dependent protease HslV [Gemmatimonas aurantiaca T-27]
 gi|259491388|sp|C1ABE1|HSLV_GEMAT RecName: Full=ATP-dependent protease subunit HslV
 gi|226091102|dbj|BAH39547.1| ATP-dependent protease HslV [Gemmatimonas aurantiaca T-27]
          Length = 181

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 96/174 (55%), Positives = 130/174 (74%), Gaps = 1/174 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ ATTIL VR++G V I GDGQVS+G TV K  A KVR L  G ++AGFAGS ADA TL
Sbjct: 5   QVRATTILAVRRNGQVAIGGDGQVSVGDTVAKQRAVKVRTLKGGRVLAGFAGSVADALTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E+KLE+YP  L R+SVELAK+WR D+ LR LEAM+++AD     +++G G+++EP+
Sbjct: 65  FEKFEEKLERYPGNLPRASVELAKEWRSDRVLRRLEAMLIVADVEHGFMLSGNGELIEPD 124

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           +G++AIGSGG+YA +AARALM  TQ    +I  KA++IA +IC+YTN NI +  
Sbjct: 125 DGILAIGSGGAYAQAAARALMRETQLPPRDIVEKALTIAGEICIYTNTNITVLE 178


>gi|300870912|ref|YP_003785783.1| ATP-dependent protease peptidase subunit [Brachyspira pilosicoli
           95/1000]
 gi|300688611|gb|ADK31282.1| ATP-dependent protease peptidase subunit [Brachyspira pilosicoli
           95/1000]
          Length = 176

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 135/175 (77%), Gaps = 1/175 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI  V +DGV  IAGDGQV+LG+TVMK NA K+R+L  G +I+GFAGS+ADAFTL 
Sbjct: 2   FKGTTICAVCRDGVTAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ EKKL+++   L R++VELA++WR DK LRNL+A+I++A K   L+++G GDV+E EN
Sbjct: 62  EKFEKKLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKEKMLLLSGNGDVIESEN 121

Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            ++AIGSGG YA +AA AL  +T  SA+EIARK++ IA+ IC+YTN NI LE ++
Sbjct: 122 NILAIGSGGQYAKAAAMALSENTNLSAKEIARKSLEIASQICIYTNSNISLEVIE 176


>gi|296126032|ref|YP_003633284.1| 20S proteasome A and B subunits [Brachyspira murdochii DSM 12563]
 gi|296017848|gb|ADG71085.1| 20S proteasome A and B subunits [Brachyspira murdochii DSM 12563]
          Length = 176

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 97/175 (55%), Positives = 135/175 (77%), Gaps = 1/175 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI  V ++G+  IAGDGQV+LG+TVMK NA K+R+L  G +I+GFAGS+ADAFTL 
Sbjct: 2   FKGTTICAVCRNGITAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ EK+L+++   L R++VELA++WR DK LRNL+A+I++A K   L+++G GDV+E EN
Sbjct: 62  EKFEKRLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKDKMLLLSGNGDVIESEN 121

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            ++AIGSGG YA +AA AL  +T  SA+EIA+KA+ IA+ IC+YTN NI LE ++
Sbjct: 122 NILAIGSGGQYAKAAAMALCENTDLSAKEIAKKALEIASQICIYTNSNISLEVIE 176


>gi|224501777|ref|ZP_03670084.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           FSL R2-561]
          Length = 179

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 130/179 (72%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++HATTI  V+ DG   +AGDGQV+LG   VMK  A+KVRRL    +IAGFAGS ADAF
Sbjct: 1   MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KL +Y   L R+SVELA+ WR D  LR LEAM+++ DK   L+++G G+V+E
Sbjct: 61  TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120

Query: 130 PENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P+NG++AIGSGG+YAL+A RAL         A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 121 PDNGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 179


>gi|257471628|ref|ZP_05635627.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
          Length = 176

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 98/171 (57%), Positives = 131/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR    VVI GDGQ +LG T+MK+N +K+R L    +IAGFAG +ADAFTL E  
Sbjct: 2   TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           +KKL  Y  QL R+++ELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PEN ++
Sbjct: 62  DKKLAMYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGGSYA S+ARAL+ +T   A +I RK+++IAA+IC+YTNHN  ++ L
Sbjct: 122 AIGSGGSYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 172


>gi|94967245|ref|YP_589293.1| ATP-dependent protease peptidase subunit [Candidatus Koribacter
           versatilis Ellin345]
 gi|189043926|sp|Q1IV81|HSLV_ACIBL RecName: Full=ATP-dependent protease subunit HslV
 gi|94549295|gb|ABF39219.1| ATP dependent peptidase CodWX, CodW component [Candidatus
           Koribacter versatilis Ellin345]
          Length = 180

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 101/173 (58%), Positives = 129/173 (74%), Gaps = 1/173 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            +TT+L VR+DG VV+A DGQV+LG+ V+K NARK+RRL +  IIAGFAGS+ADAF+L  
Sbjct: 8   RSTTVLCVRRDGKVVMAADGQVTLGEGVIKHNARKLRRLYQDKIIAGFAGSTADAFSLFG 67

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R E KLEQY   L R++VEL KDWR DK LR LEA++L+ADK  T +I+G GDV+EP+ G
Sbjct: 68  RFESKLEQYHGNLSRAAVELGKDWRTDKMLRQLEALLLVADKDQTFLISGQGDVIEPDTG 127

Query: 134 VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + AIGSGGSYA +AA AL+      A +IA +AM IA  IC+YTN  + +E L
Sbjct: 128 IAAIGSGGSYATAAATALLEHSTLDARQIAEEAMKIAGKICIYTNDRVTIEEL 180


>gi|160872089|ref|ZP_02062221.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Rickettsiella grylli]
 gi|159120888|gb|EDP46226.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Rickettsiella grylli]
          Length = 185

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 99/178 (55%), Positives = 133/178 (74%), Gaps = 2/178 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +H TTIL VR++  VVI GDGQV+LG   V+K NARKVR+L  G ++ GFAG++ADAFT
Sbjct: 3   SLHGTTILLVRRNDKVVIGGDGQVTLGNAIVLKGNARKVRKLYDGQVLVGFAGATADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L+ER E KL++   +L R+SVELAKDWR D+ LR LEAM+ +ADK  + +++G GDV+EP
Sbjct: 63  LIERFENKLKECNGRLDRASVELAKDWRSDRVLRRLEAMLAVADKEKSFMLSGNGDVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           E+ ++AIGSGG+YA SAA AL  +T+ SA  I  K++ IAADICV+TNH   +E +  
Sbjct: 123 EHDLIAIGSGGAYAQSAALALFQNTKLSARSIVEKSLMIAADICVFTNHQRSIEEIDS 180


>gi|309389213|gb|ADO77093.1| ATP dependent peptidase CodWX, CodW component [Halanaerobium
           praevalens DSM 2228]
          Length = 186

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 101/180 (56%), Positives = 130/180 (72%), Gaps = 2/180 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              ATTI+ V+ +  + +AGDGQV+LG TVMK+ A+KVRRL  G I+AGFAG+SADAFTL
Sbjct: 5   DFDATTIVAVKHNSSMALAGDGQVTLGNTVMKSTAKKVRRLYNGKILAGFAGTSADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+Y   L R++VELAK+WR DK LR LEA++++AD    L+I+G GDV+EP+
Sbjct: 65  FEKFEAKLEEYHGSLQRAAVELAKEWRTDKILRKLEALLIVADLDEILIISGNGDVIEPD 124

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
             + AIGSGG YA +AA AL        A EIA +A+ IAA IC+YTN NI LE LK G+
Sbjct: 125 GKITAIGSGGPYARAAAIALSDHAQDMKAGEIASEALKIAASICIYTNENISLEELKGGE 184


>gi|88858830|ref|ZP_01133471.1| peptidase component of the HslUV protease [Pseudoalteromonas
           tunicata D2]
 gi|88819056|gb|EAR28870.1| peptidase component of the HslUV protease [Pseudoalteromonas
           tunicata D2]
          Length = 172

 Score =  172 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 103/171 (60%), Positives = 136/171 (79%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+DG VVIAGDGQVSLG TVMK NA+KVRRL  G ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRDGKVVIAGDGQVSLGNTVMKGNAKKVRRLYNGKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L +++VE+AKDWR D+ LR LEA++ +AD T + +ITG GDV++PEN ++
Sbjct: 62  ESKLEMHQGHLTKAAVEMAKDWRSDRALRKLEALLAVADHTASFIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG++A SAA AL+ +T+ SA EIA K+++IA +ICV+TNH   +E L
Sbjct: 122 AIGSGGAFAQSAATALLENTELSAREIAEKSLTIAGNICVFTNHFQTIEEL 172


>gi|332288324|ref|YP_004419176.1| ATP-dependent protease peptidase subunit [Gallibacterium anatis
           UMN179]
 gi|330431220|gb|AEC16279.1| ATP-dependent protease peptidase subunit [Gallibacterium anatis
           UMN179]
          Length = 174

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 97/172 (56%), Positives = 130/172 (75%), Gaps = 2/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVVGGDGQVSLGNTVMKGNARKVRRLYGDKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAK+WR D+ LR LEAM+++AD   +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKEWRTDRALRKLEAMLIVADAKESLIITGLGDVVQPEEDQI 121

Query: 135 MAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+Y   +A   + +T  SA EI  K++ IA DICV+TN N  +E L
Sbjct: 122 LAIGSGGNYAMAAARALVANTDLSAREIVEKSLKIAGDICVFTNTNFTIEEL 173


>gi|308068647|ref|YP_003870252.1| ATP-dependent protease hslV [Paenibacillus polymyxa E681]
 gi|305857926|gb|ADM69714.1| ATP-dependent protease hslV [Paenibacillus polymyxa E681]
          Length = 180

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 92/178 (51%), Positives = 133/178 (74%), Gaps = 3/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI  VR +G   IAGDGQV+ G +V MK  A+KVRRL +G ++AGFAGS ADA 
Sbjct: 3   MSFHATTICAVRHNGKGAIAGDGQVTFGNSVVMKQTAKKVRRLYRGQVVAGFAGSVADAI 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE++   L R++VELAKDWR D+ LR LEA++++ D +  L+I+G G+++E
Sbjct: 63  TLFEKFENKLEEHHGNLQRAAVELAKDWRQDRILRKLEALMIVMDSSGMLLISGGGEIIE 122

Query: 130 PENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++ V+AIGSGG++AL+AARA         A+++AR+A+ +A++ICVYTN+ I++E L
Sbjct: 123 PDDDVLAIGSGGNFALAAARAFKRHGSGMEAKDMAREALEVASEICVYTNNQIIVEEL 180


>gi|330858961|emb|CBX69323.1| ATP-dependent protease hslV [Yersinia enterocolitica W22703]
          Length = 174

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 100/172 (58%), Positives = 132/172 (76%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVI GDGQV+LG TVMK NA+KVRRL    IIAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNDKIIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG YA SAA AL+ +T+  A +I  K++SIA DIC+YTN    +E L 
Sbjct: 122 AIGSGGPYAQSAAHALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEELT 173


>gi|289434562|ref|YP_003464434.1| ATP-dependent protease HslV/ClpQ [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289170806|emb|CBH27348.1| ATP-dependent protease HslV/ClpQ [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 181

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 96/179 (53%), Positives = 130/179 (72%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++HATTI  V+ DG   +AGDGQV+LG   VMK  A+KVRRL    +IAGFAGS ADAF
Sbjct: 3   MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KL +Y   L R+SVELA+ WR D  LR LEAM+++ DK   L+++G G+V+E
Sbjct: 63  TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 122

Query: 130 PENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G++AIGSGG+YAL+A RAL         A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 123 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDHITVEEL 181


>gi|58584979|ref|YP_198552.1| ATP-dependent protease peptidase subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|75497643|sp|Q5GRR4|HSLV_WOLTR RecName: Full=ATP-dependent protease subunit HslV
 gi|58419295|gb|AAW71310.1| ATP-dependent protease HslV, peptidase subunit [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
          Length = 176

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 118/175 (67%), Positives = 151/175 (86%), Gaps = 1/175 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M+ TTIL++RKD  V++ GDGQVSLG TV+K+ A+KVRRL   ++IAGFAG++ADAFTL 
Sbjct: 1   MYGTTILSIRKDKSVIVIGDGQVSLGHTVIKSGAKKVRRLSSDSVIAGFAGATADAFTLF 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GDVLEPE+
Sbjct: 61  ERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEPED 120

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           G+ AIGSGG++ALSAA+AL+     S EEIA+KAM IAADICVYTNHN+V+E ++
Sbjct: 121 GIAAIGSGGNFALSAAKALIDIKGISIEEIAKKAMKIAADICVYTNHNVVVEKIE 175


>gi|319424865|gb|ADV52939.1| 20S proteasome A and B subunits [Shewanella putrefaciens 200]
          Length = 174

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 129/171 (75%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NA+KVRRL     +AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKALAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   LLRS+VELAKDWR D+ LR LEAM+++AD   +L+ITG GDV++PE  ++
Sbjct: 62  EAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEAMLVVADAEASLIITGNGDVVQPEYDLV 121

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG+Y   +A   L +T+ SA EIA K+++IA DICV+TN    +E L
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAGDICVFTNQFKTIEEL 172


>gi|119943798|ref|YP_941478.1| ATP-dependent protease peptidase subunit [Psychromonas ingrahamii
           37]
 gi|166222991|sp|A1SQW4|HSLV_PSYIN RecName: Full=ATP-dependent protease subunit HslV
 gi|119862402|gb|ABM01879.1| 20S proteasome, A and B subunits [Psychromonas ingrahamii 37]
          Length = 184

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 128/176 (72%), Gaps = 1/176 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VV+ GDGQVSLG TVMK NARKV RL    +IAGFAG +ADAFTLLER 
Sbjct: 2   TTIVSVRRGNQVVVGGDGQVSLGNTVMKGNARKVHRLYNNQVIAGFAGGTADAFTLLERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL+ +   L R++VELAKDWR D+ LR LEA++ +ADK  + +ITG GDV+ PEN +M
Sbjct: 62  EAKLQAHQGNLERAAVELAKDWRTDRSLRRLEALLAVADKNSSYIITGNGDVVRPENDLM 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           AIGSGG +A SAA AL+ +T   A+ I  KA++IA +ICV+TN    +E +   DE
Sbjct: 122 AIGSGGYFAQSAAIALLENTDLDAKTIVEKALAIAGNICVFTNETHTIECIDFSDE 177


>gi|302343316|ref|YP_003807845.1| 20S proteasome A and B subunits [Desulfarculus baarsii DSM 2075]
 gi|301639929|gb|ADK85251.1| 20S proteasome A and B subunits [Desulfarculus baarsii DSM 2075]
          Length = 180

 Score =  171 bits (434), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 109/175 (62%), Positives = 139/175 (79%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ +TT+L ++KDG VV+AGDGQV++GQTV+KA ARKVRRL  G ++AGFAG++ADAFTL
Sbjct: 6   EVRSTTVLALKKDGKVVMAGDGQVTMGQTVVKATARKVRRLHNGRVLAGFAGATADAFTL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLE +  QL R++VELAKDWR DK LR LEA+++ AD+   L+I+G GDV++PE
Sbjct: 66  FERLEGKLEAHSGQLPRAAVELAKDWRTDKMLRRLEALLIAADREHLLIISGSGDVIDPE 125

Query: 132 NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
            GV AIGSGG YAL+AARALM+      E I R AM +AADIC+YTNH IV+E L
Sbjct: 126 EGVAAIGSGGPYALAAARALMAHSPLDPERIVRAAMDVAADICIYTNHQIVVEAL 180


>gi|239826607|ref|YP_002949231.1| ATP-dependent protease peptidase subunit [Geobacillus sp. WCH70]
 gi|259491389|sp|C5D8V8|HSLV_GEOSW RecName: Full=ATP-dependent protease subunit HslV
 gi|239806900|gb|ACS23965.1| 20S proteasome A and B subunits [Geobacillus sp. WCH70]
          Length = 180

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 97/178 (54%), Positives = 133/178 (74%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + HATTI  +  +G   +AGDGQV+ G   VMK  A+KVRRL +G ++AGFAGS ADAFT
Sbjct: 3   QFHATTIFAIHHNGKAAMAGDGQVTFGNAVVMKHTAKKVRRLFQGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KLE++   L R++VELAK+WR DK LR LEAM+++ D+   L+++G G+V+EP
Sbjct: 63  LFEMFEGKLEEFNGNLPRAAVELAKEWRSDKVLRRLEAMLIVMDERHLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YAL+A RAL      Q SA+EIA+ A+ IAA+ICVYTN +I++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRALKQYAGDQLSAKEIAKAALEIAANICVYTNDHIIVEEL 180


>gi|160896906|ref|YP_001562488.1| ATP-dependent protease peptidase subunit [Delftia acidovorans
           SPH-1]
 gi|238065853|sp|A9BUJ5|HSLV_DELAS RecName: Full=ATP-dependent protease subunit HslV
 gi|160362490|gb|ABX34103.1| 20S proteasome A and B subunits [Delftia acidovorans SPH-1]
          Length = 181

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 99/179 (55%), Positives = 137/179 (76%), Gaps = 5/179 (2%)

Query: 12  KMHATTILTVRKDG----VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           + H TTI++VR+       V I GDGQV+LG  V+K  ARKVR+L  G ++AGFAG++AD
Sbjct: 3   QYHGTTIISVRRQTPEGVQVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ER E KLE++   L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 63  AFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           LEPE G+++IGSGG+YA SAA+AL+ +T+ SAEEI RK+++IA ++C+YTN +  +ETL
Sbjct: 123 LEPEQGIVSIGSGGAYAHSAAKALLTNTELSAEEIVRKSLAIAGELCIYTNMHHTVETL 181


>gi|30749448|pdb|1M4Y|A Chain A, Crystal Structure Of Hslv From Thermotoga Maritima
 gi|30749449|pdb|1M4Y|B Chain B, Crystal Structure Of Hslv From Thermotoga Maritima
 gi|30749450|pdb|1M4Y|C Chain C, Crystal Structure Of Hslv From Thermotoga Maritima
          Length = 171

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 93/170 (54%), Positives = 125/170 (73%), Gaps = 1/170 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL VR++G  V+ GDGQV+ G TV+K NARKVR+LG+G ++AGFAGS ADA TL +R 
Sbjct: 1   TTILVVRRNGQTVMGGDGQVTFGSTVLKGNARKVRKLGEGKVLAGFAGSVADAMTLFDRF 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL ++   L +++VELAKDWR D+ LR LEA++L+ADK    +I+G G+V++P++   
Sbjct: 61  EAKLREWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADKENIFIISGNGEVIQPDDDAA 120

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG Y   +A   L +T  SA EI  KAM+IA +IC+YTN NIV+E 
Sbjct: 121 AIGSGGPYALAAAKALLRNTDLSAREIVEKAMTIAGEICIYTNQNIVIEE 170


>gi|157964395|ref|YP_001499219.1| ATP-dependent protease peptidase subunit [Rickettsia massiliae
           MTU5]
 gi|157844171|gb|ABV84672.1| Heat shock protein HslV [Rickettsia massiliae MTU5]
          Length = 190

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 103/180 (57%), Positives = 137/180 (76%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL ++K+  ++IA DGQVS G TV+K+ ARK+R +    IIAGFAGS+A
Sbjct: 9   MSDNLALHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTA 68

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+L  K+EQ+ + LLRS+VELAKDWR DKYLR LEAM+++AD++  L++TG GD
Sbjct: 69  DGLALFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGD 128

Query: 127 VLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPEN V AIGSGG +ALSAARAL       +AEEIA K+M+IAAD+CV++NHNI++E 
Sbjct: 129 VVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK 188


>gi|237749449|ref|ZP_04579929.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
           OXCC13]
 gi|229380811|gb|EEO30902.1| ATP-dependent protease peptidase subunit [Oxalobacter formigenes
           OXCC13]
          Length = 178

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 128/176 (72%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  V+K  ARKVR+L  G ++AGFAG +ADAFTL
Sbjct: 3   QFHGTTIVSVRRGSTVALGGDGQVTLGNIVIKGTARKVRKLYNGRVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +ER E KLE++   LLRSSVELAKDWR D+ LR LEAM+L+AD+  TLVITG GDVLEPE
Sbjct: 63  IERFEAKLEKHQGNLLRSSVELAKDWRTDRMLRRLEAMLLVADRESTLVITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            GV AIGSGG+Y   +A   + +T     EI  KA+ IA D+C+YTN   ++ETL 
Sbjct: 123 EGVGAIGSGGAYAQSAALALVRNTDLPPAEIISKALGIAGDLCIYTNQAHIIETLD 178


>gi|213969434|ref|ZP_03397571.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           tomato T1]
 gi|213925805|gb|EEB59363.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           tomato T1]
          Length = 192

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 101/175 (57%), Positives = 133/175 (76%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 18  TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 77

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 78  EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137

Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG     +A   L+ T  SA EIA  ++ IA DICV+TNHNI +E   + D
Sbjct: 138 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEEQDLAD 192


>gi|332532292|ref|ZP_08408172.1| ATP-dependent protease HslV [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038159|gb|EGI74605.1| ATP-dependent protease HslV [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 172

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 133/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VVI GDGQVSLG TVMK NARKVRRL  G +IAGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGDKVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG++A SAA AL+ +T  SA EI  K+++IA +ICV+TN+   +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGNICVFTNNFQTIEEL 172


>gi|42526719|ref|NP_971817.1| ATP-dependent protease peptidase subunit [Treponema denticola ATCC
           35405]
 gi|47605597|sp|P61478|HSLV_TREDE RecName: Full=ATP-dependent protease subunit HslV
 gi|41817034|gb|AAS11728.1| heat shock protein HslVU, ATP-dependent protease HslV [Treponema
           denticola ATCC 35405]
 gi|325473781|gb|EGC76969.1| ATP-dependent protease hslV [Treponema denticola F0402]
          Length = 178

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 139/175 (79%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TT++ VRKDG +V+AGDGQV++G+TVMK NARKVR++  G II GFAG++ADAFTL
Sbjct: 4   KIRSTTVIAVRKDGKIVMAGDGQVTMGETVMKGNARKVRKIYDGKIITGFAGATADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LE+ E +++++   L R++VELAKDWR DK L+NL+A++L+AD   TL+I+G GDV+EPE
Sbjct: 64  LEKFEIRVKEFSGDLTRAAVELAKDWRTDKMLKNLQALLLVADSKTTLLISGNGDVIEPE 123

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             V+AIGSGG+YA ++A ALM +T  SA EIA K++ IA  IC+YTN  I+ E +
Sbjct: 124 EDVLAIGSGGNYAYASALALMQNTNLSAREIAEKSLQIAGKICIYTNGKIITEEI 178


>gi|301119701|ref|XP_002907578.1| ATP-dependent protease hslV [Phytophthora infestans T30-4]
 gi|262106090|gb|EEY64142.1| ATP-dependent protease hslV [Phytophthora infestans T30-4]
          Length = 209

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 115/183 (62%), Positives = 143/183 (78%), Gaps = 1/183 (0%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             A  MH TTIL VRK+G V + GDGQVSLG TV+K NA+KVRR+G+  + AGFAGS+AD
Sbjct: 19  SDAPTMHGTTILCVRKNGKVCLIGDGQVSLGHTVVKPNAKKVRRIGEHIV-AGFAGSTAD 77

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL+ERLE KL++YP QL RS VELAKDWR DKYLR LEA+++++D   +  +TG GDV
Sbjct: 78  AFTLMERLEAKLDEYPGQLTRSCVELAKDWRTDKYLRRLEAILIVSDINQSYTLTGNGDV 137

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           LEP +G++ IGSGG+YAL+AARAL+     AE I RKAM IAADICVYTN N+V+E L+ 
Sbjct: 138 LEPHDGIIGIGSGGTYALAAARALIDQDLDAETIGRKAMKIAADICVYTNGNVVVEMLEE 197

Query: 188 GDE 190
           G +
Sbjct: 198 GKD 200


>gi|152976196|ref|YP_001375713.1| ATP-dependent protease peptidase subunit [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|189043929|sp|A7GRG0|HSLV_BACCN RecName: Full=ATP-dependent protease subunit HslV
 gi|152024948|gb|ABS22718.1| 20S proteasome A and B subunits [Bacillus cytotoxicus NVH 391-98]
          Length = 180

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 97/177 (54%), Positives = 130/177 (73%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  +  +G   +AGDGQV+ G   VMK  ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAIHHNGKCAMAGDGQVTFGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM+++ D+T  L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDETTLLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG YAL+A RAL        +A+EIA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGHYALAAGRALKRHASEHLTAKEIAKASLEIAGDICVYTNHNIIVEEL 180


>gi|108762078|ref|YP_631221.1| ATP-dependent protease peptidase subunit [Myxococcus xanthus DK
           1622]
 gi|47605682|sp|Q84F94|HSLV_MYXXA RecName: Full=ATP-dependent protease subunit HslV
 gi|123074376|sp|Q1D802|HSLV_MYXXD RecName: Full=ATP-dependent protease subunit HslV
 gi|27804890|gb|AAO22924.1| HslV-like protein [Myxococcus xanthus]
 gi|108465958|gb|ABF91143.1| heat shock protein HslVU, ATP-dependent protease HslV [Myxococcus
           xanthus DK 1622]
          Length = 175

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 93/174 (53%), Positives = 129/174 (74%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TTIL VR+DG V IA DGQVSL +TVMK  A+KVRRLG+G ++AGFAGS+ADAFTL 
Sbjct: 2   FHGTTILCVRRDGKVAIASDGQVSLEKTVMKNTAKKVRRLGEGQVLAGFAGSTADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E KL+++   + R+ VEL KDWR D++LR LEA++++ADK  T +++G GDV+EP+ 
Sbjct: 62  ERFEAKLKEHQKNMARACVELGKDWRTDRFLRRLEALLIVADKEKTFILSGAGDVIEPDY 121

Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           G+ A+GSGG Y   +A   +  TQ SA ++  ++++IA +I +YTN NI +E L
Sbjct: 122 GIAAVGSGGPYAFAAARALMAHTQMSARDVVHQSLTIAGEIDIYTNANISIEEL 175


>gi|283853297|ref|ZP_06370547.1| 20S proteasome A and B subunits [Desulfovibrio sp. FW1012B]
 gi|283571337|gb|EFC19347.1| 20S proteasome A and B subunits [Desulfovibrio sp. FW1012B]
          Length = 184

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 100/182 (54%), Positives = 134/182 (73%), Gaps = 2/182 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++  TTIL V+ D  V +AGDGQV+LGQ+V MK  ARKVRR+ K  ++ GFAG++ADAF
Sbjct: 1   MELRGTTILAVKTDTGVAMAGDGQVTLGQSVAMKHGARKVRRIYKDKVVIGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER E KLE++   L+R+SVELAKDWR DKYLR LEAM+L+AD    L+++G GDV+E
Sbjct: 61  TLFERFEAKLEEFGGNLVRASVELAKDWRKDKYLRRLEAMLLVADAGNILLLSGNGDVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           P++GV AIGSGG Y   +A   +  T  S  EI  +AM+IAA+ICV+TN  IV+ET++  
Sbjct: 121 PDDGVAAIGSGGPYALAAARALVRHTGLSGREIVERAMAIAAEICVFTNDRIVVETVERP 180

Query: 189 DE 190
            +
Sbjct: 181 AD 182


>gi|21672817|ref|NP_660884.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           Sg (Schizaphis graminum)]
 gi|25008568|sp|Q8K906|HSLV_BUCAP RecName: Full=ATP-dependent protease subunit HslV
 gi|21623469|gb|AAM68095.1| heat shock protein HslV [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 176

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 98/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR    VVI GDGQ +LG T+MK+N +K+R L    +IAGFAG +ADAFTL E  
Sbjct: 2   TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRTLYHEKVIAGFAGGTADAFTLFEMF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKL  Y  QL R+++ELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PE+ ++
Sbjct: 62  EKKLAMYQGQLPRAAIELAKDWRSDRMLRKLEALLAVADKDTSLIITGNGDVIQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGGSYA SAARAL+ +T  +A+EI  K+++IAA+IC+YTNH+  ++ L
Sbjct: 122 AIGSGGSYAQSAARALINNTTLNADEIVEKSLNIAANICIYTNHSFTIKEL 172


>gi|322434045|ref|YP_004216257.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX9]
 gi|321161772|gb|ADW67477.1| 20S proteasome A and B subunits [Acidobacterium sp. MP5ACTX9]
          Length = 211

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 105/182 (57%), Positives = 138/182 (75%), Gaps = 6/182 (3%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ +TT++ VR+   VV+A DGQVSLG TVMK++A+K+RRL    ++AGFAGS+ADAF+L
Sbjct: 29  RIRSTTVICVRRGDSVVMAADGQVSLGGTVMKSSAKKIRRLYNDKVLAGFAGSTADAFSL 88

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
             R E KLEQY   L R++VELAKDWR DK LR LEA++++AD + TL+++G GDV+EP+
Sbjct: 89  FGRFEAKLEQYAGNLGRAAVELAKDWRTDKMLRQLEALLVVADASQTLMLSGTGDVIEPD 148

Query: 132 -----NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
                 G+MAIGSGGSYA +AA ALM +T+ SA EI  KAM IAADIC+YTN  I +E L
Sbjct: 149 AMRPGEGIMAIGSGGSYAQAAALALMENTEMSAREITEKAMKIAADICIYTNERITVEEL 208

Query: 186 KV 187
           K 
Sbjct: 209 KA 210


>gi|152988750|ref|YP_001351109.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
           PA7]
 gi|166222989|sp|A6VDH4|HSLV_PSEA7 RecName: Full=ATP-dependent protease subunit HslV
 gi|150963908|gb|ABR85933.1| heat shock protein HslV [Pseudomonas aeruginosa PA7]
          Length = 182

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 95/174 (54%), Positives = 133/174 (76%), Gaps = 2/174 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL  G ++AGFAG++ADAFTL ER 
Sbjct: 7   TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 66

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E++LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 67  EQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 126

Query: 136 AIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           A+GSGG +  A + A    + + SA E+A  A++IA  ICV+TN N+ +E L  
Sbjct: 127 AMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEELDS 180


>gi|228965512|ref|NP_240381.2| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           APS (Acyrthosiphon pisum)]
 gi|11132902|sp|P57115|HSLV_BUCAI RecName: Full=ATP-dependent protease subunit HslV
          Length = 176

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 97/171 (56%), Positives = 131/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR    VVI GDGQ +LG T+MK+N +K+R L    +IAGFAG +ADAFTL E  
Sbjct: 2   TTILSVRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           +KKL  Y  QL R+++ELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PE+ ++
Sbjct: 62  DKKLAMYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGGSYA S+ARAL+ +T   A +I RK+++IAA+IC+YTNHN  ++ L
Sbjct: 122 AIGSGGSYAQSSARALIENTHLDANQIVRKSLNIAANICIYTNHNFTIKEL 172


>gi|310641538|ref|YP_003946296.1| ATP-dependent protease subunit hslv [Paenibacillus polymyxa SC2]
 gi|309246488|gb|ADO56055.1| ATP-dependent protease subunit HslV [Paenibacillus polymyxa SC2]
          Length = 180

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 92/178 (51%), Positives = 132/178 (74%), Gaps = 3/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTI  VR +G   IAGDGQV+ G +V MK  A+KVRRL +G ++AGFAGS ADA 
Sbjct: 3   MSFHATTICAVRHNGKGAIAGDGQVTFGNSVVMKQTAKKVRRLYRGQVVAGFAGSVADAI 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE++   L R++VELAKDWR D+ LR LEA++++ D +  L+I+G G+++E
Sbjct: 63  TLFEKFENKLEEHHGNLQRAAVELAKDWRQDRVLRKLEALMIVMDSSGMLLISGGGEIIE 122

Query: 130 PENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++ V+AIGSGG++AL+AARA         A+++AR+A+ +A++ICVYTN  I++E L
Sbjct: 123 PDDDVLAIGSGGNFALAAARAFKRHGSGMEAKDMAREALEVASEICVYTNSQIIVEEL 180


>gi|119896714|ref|YP_931927.1| ATP-dependent protease peptidase subunit [Azoarcus sp. BH72]
 gi|166221622|sp|A1K2I5|HSLV_AZOSB RecName: Full=ATP-dependent protease subunit HslV
 gi|119669127|emb|CAL93040.1| ATP-dependent protease HslV [Azoarcus sp. BH72]
          Length = 178

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 135/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+   V + GDGQV+LG  V+KA+ARKVR L +G I+AGFAG +ADAFTL
Sbjct: 3   QYHGTTILSVRRGNSVALGGDGQVTLGNIVVKASARKVRTLYQGQILAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KL+++   LLRS+VELAKDWR D+ LR LEAM+ +AD+  +L+ITG GDVLEPE
Sbjct: 63  FERFEAKLDKHQGNLLRSAVELAKDWRTDRMLRRLEAMLAVADREHSLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G++AIGSGG+YA SAARAL+ +T+ S  ++  K+++IA D+C+YTN    +E L 
Sbjct: 123 QGIVAIGSGGAYAQSAARALIENTELSPRDVIAKSLAIAGDLCIYTNQCHTIEVLD 178


>gi|71279586|ref|YP_271018.1| ATP-dependent protease peptidase subunit [Colwellia psychrerythraea
           34H]
 gi|71145326|gb|AAZ25799.1| ATP-dependent protease HslVU, HslV subunit [Colwellia
           psychrerythraea 34H]
          Length = 172

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 100/171 (58%), Positives = 135/171 (78%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G V I GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVAIGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLEQ+   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  ESKLEQHQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVIQPEHDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG++A SAA AL+ +T  SA+EI  K+++IA +ICV+TN    ++ L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAKEIVEKSLTIAGNICVFTNQEQTIDEL 172


>gi|297617132|ref|YP_003702291.1| 20S proteasome A and subunit betas [Syntrophothermus lipocalidus
           DSM 12680]
 gi|297144969|gb|ADI01726.1| 20S proteasome A and B subunits [Syntrophothermus lipocalidus DSM
           12680]
          Length = 177

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 95/176 (53%), Positives = 126/176 (71%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             ATTI+ V+KDG V IAGDGQV+ GQT V+KA A+K+R L  G ++AGFAGS ADA TL
Sbjct: 2   FRATTIVAVKKDGEVTIAGDGQVTYGQTFVLKAQAKKIRTLYNGKVLAGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E  L +    L R++VE+AK WR D+ LR LEA++++ADK    +I+G G+V+EP+
Sbjct: 62  FERFEDCLRESNGNLTRAAVEVAKQWRTDRVLRRLEALLIVADKEKMFLISGSGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + V+AIGSGG Y   +A   L  TQ S+ EIA +A+ IAA+ICV+TN NI +E LK
Sbjct: 122 DQVVAIGSGGPYALAAARALLRHTQLSSREIAEEALRIAAEICVFTNGNISVEQLK 177


>gi|170785086|pdb|2Z3A|A Chain A, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785087|pdb|2Z3A|B Chain B, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785088|pdb|2Z3A|C Chain C, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785089|pdb|2Z3A|D Chain D, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785090|pdb|2Z3A|E Chain E, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785091|pdb|2Z3A|F Chain F, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785092|pdb|2Z3A|G Chain G, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785093|pdb|2Z3A|H Chain H, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785094|pdb|2Z3A|I Chain I, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785095|pdb|2Z3A|J Chain J, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785096|pdb|2Z3A|K Chain K, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785097|pdb|2Z3A|L Chain L, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785098|pdb|2Z3B|A Chain A, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785099|pdb|2Z3B|B Chain B, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785100|pdb|2Z3B|C Chain C, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785101|pdb|2Z3B|D Chain D, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785102|pdb|2Z3B|E Chain E, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785103|pdb|2Z3B|F Chain F, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785104|pdb|2Z3B|G Chain G, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785105|pdb|2Z3B|H Chain H, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785106|pdb|2Z3B|I Chain I, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785107|pdb|2Z3B|J Chain J, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785108|pdb|2Z3B|K Chain K, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
 gi|170785109|pdb|2Z3B|L Chain L, Crystal Structure Of Bacillus Subtilis Codw, A Non-
           Canonical Hslv-Like Peptidase With An Impaired Catalytic
           Apparatus
          Length = 180

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  V+  G   ++GDGQV+ GQ  VMK  ARKVR+L  G ++AGFAGS ADAFT
Sbjct: 2   SFHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFT 61

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KLE+Y   L R++VELAK+WR DK LR LEAM+++ ++   L+++G G+V+EP
Sbjct: 62  LFEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEP 121

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G++AIGSGG+YAL+A RAL        SA EIAR A+  A +ICVYTN  I+LE L+
Sbjct: 122 DDGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE 180


>gi|89902205|ref|YP_524676.1| ATP-dependent protease peptidase subunit [Rhodoferax ferrireducens
           T118]
 gi|122478440|sp|Q21SV8|HSLV_RHOFD RecName: Full=ATP-dependent protease subunit HslV
 gi|89346942|gb|ABD71145.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Rhodoferax ferrireducens T118]
          Length = 182

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 99/179 (55%), Positives = 134/179 (74%), Gaps = 5/179 (2%)

Query: 12  KMHATTILTVRKDG----VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           + H TTI++VR+       V I GDGQV+LG  V+K  ARKVR+L  G ++AGFAG++AD
Sbjct: 3   QFHGTTIISVRRKTPEGYSVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ER E KLE++   L+R+++EL KDWR D+ LR LEAM+ +AD   +L+ITG GDV
Sbjct: 63  AFTLFERFEAKLEKHQGHLVRAAIELTKDWRTDRVLRRLEAMLAVADSEASLIITGNGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           LEPENG++ IGSGG+YA +AA AL+  T+ SA EI +K++ IAA+IC+YTN +  +ETL
Sbjct: 123 LEPENGIVTIGSGGAYAQAAAMALLNHTEMSAPEIVKKSLEIAAEICIYTNMSHTIETL 181


>gi|332297604|ref|YP_004439526.1| ATP-dependent protease hslV [Treponema brennaborense DSM 12168]
 gi|332180707|gb|AEE16395.1| ATP-dependent protease hslV [Treponema brennaborense DSM 12168]
          Length = 179

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 96/175 (54%), Positives = 136/175 (77%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TT++ VRK+G V +AGDGQV++G+TVMK NARKVRRL  G ++ GFAG++ADAF L
Sbjct: 5   KIRSTTVIAVRKNGRVAMAGDGQVTMGETVMKGNARKVRRLYDGKVLTGFAGATADAFNL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ++ E K++++   L R++VELAK WR DK LR LEA++L+ADK   L+I+G GDV+EPE
Sbjct: 65  FDKFEIKIKEFAGDLTRAAVELAKQWRTDKALRQLEALLLVADKDKILLISGTGDVIEPE 124

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           N V+AIGSGG+YA +AA A +  +   A+EIA K++ IA +IC+YTN++I +E L
Sbjct: 125 NDVLAIGSGGNYAYAAALAYLDSSDLGAKEIAEKSLKIAGNICIYTNNHITVEEL 179


>gi|88813055|ref|ZP_01128297.1| ATP-dependent protease peptidase subunit [Nitrococcus mobilis
           Nb-231]
 gi|88789688|gb|EAR20813.1| ATP-dependent protease peptidase subunit [Nitrococcus mobilis
           Nb-231]
          Length = 180

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 98/178 (55%), Positives = 139/178 (78%), Gaps = 1/178 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI+ +R++G  V+ GDGQV+LG TVMK NARKVRRL  G+I+AGFAG +ADAFTL
Sbjct: 3   QFQGTTIIALRRNGRAVVGGDGQVTLGDTVMKGNARKVRRLFHGHILAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E +LE++   L R++VE+AKDWR D+ LR LEA++++A+    L+++G GDV+EPE
Sbjct: 63  FERFEGQLEKHRGNLTRAAVEMAKDWRSDRVLRRLEALLVVANTESLLMLSGNGDVVEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           + ++AIGSGG+YA +AA AL+ +TQ SA EI  ++++IAADIC+YTNH++ +E L  G
Sbjct: 123 HDLIAIGSGGAYAQAAATALLENTQLSAREIVERSLNIAADICIYTNHHLAIEELGAG 180


>gi|319945235|ref|ZP_08019497.1| ATP-dependent protease HslV [Lautropia mirabilis ATCC 51599]
 gi|319741805|gb|EFV94230.1| ATP-dependent protease HslV [Lautropia mirabilis ATCC 51599]
          Length = 172

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 95/171 (55%), Positives = 130/171 (76%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   V + GDGQV+LG  V+K  ARKVRRLG   ++AGFAG +ADAFTL +R 
Sbjct: 2   TTIVSVRRGDSVALGGDGQVTLGNIVVKGTARKVRRLGGNKVLAGFAGGTADAFTLFDRF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE+YP  L++++VELAK+WR D+ LR LEAM+ +ADK  +L+ITG GDVLEPE+G++
Sbjct: 62  EAQLERYPANLMKAAVELAKEWRTDRVLRRLEAMLAVADKQHSLIITGNGDVLEPEHGLV 121

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG+Y   +A   L +T+ S  EI +K++ IA D+C+YTN N  +ETL
Sbjct: 122 AIGSGGAYAQSAALALLENTELSPTEIVQKSLKIAGDLCIYTNQNHTIETL 172


>gi|63254369|gb|AAY35465.1| 20S proteasome, A and B subunits [Pseudomonas syringae pv. syringae
           B728a]
          Length = 192

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 100/170 (58%), Positives = 131/170 (77%), Gaps = 1/170 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 18  TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 77

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 78  EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137

Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           A+GSGG     +A   L+ T  SA EIA  ++ IA DICV+TNHNI +E 
Sbjct: 138 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 187


>gi|224369850|ref|YP_002604014.1| ATP-dependent protease peptidase subunit [Desulfobacterium
           autotrophicum HRM2]
 gi|223692567|gb|ACN15850.1| HslV [Desulfobacterium autotrophicum HRM2]
          Length = 180

 Score =  170 bits (432), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 96/175 (54%), Positives = 128/175 (73%), Gaps = 1/175 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TTIL VR    VV+AGDGQV+LG  V K  A+KVRR+    II GFAG++ADA TL 
Sbjct: 5   FHGTTILAVRHKNWVVVAGDGQVTLGTIVTKHKAKKVRRIYNDKIITGFAGATADALTLS 64

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+LE+KLEQY   L RS+VELA++WR DKYLR LEAM++ AD+  T +++G GDV+EP++
Sbjct: 65  EKLEQKLEQYNGNLTRSAVELAREWRTDKYLRRLEAMMIAADEKNTYLLSGNGDVIEPDD 124

Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           GV++IGSG + A +AA+AL + T   A  I  +AM IAA +C+YTN+ I +E +K
Sbjct: 125 GVISIGSGSTAAQAAAQALVVHTDLDARTIVTEAMKIAAALCIYTNNYITIEEMK 179


>gi|226313076|ref|YP_002772970.1| ATP-dependent protease peptidase subunit [Brevibacillus brevis NBRC
           100599]
 gi|259491384|sp|C0ZFA7|HSLV_BREBN RecName: Full=ATP-dependent protease subunit HslV
 gi|226096024|dbj|BAH44466.1| ATP-dependent protease [Brevibacillus brevis NBRC 100599]
          Length = 180

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 96/177 (54%), Positives = 134/177 (75%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + HATTI  V+ +G V +AGDGQV+ G   VMK  A+KVRRL +G ++AGFAGS ADA T
Sbjct: 3   QFHATTIFAVQHNGSVAMAGDGQVTFGNSMVMKHGAKKVRRLYRGEVLAGFAGSVADAIT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KLE+Y   L R++VELAK+WRMDK LR LEAM+++A+K   L+I+G G+++EP
Sbjct: 63  LFEKFEGKLEEYHGNLQRAAVELAKEWRMDKILRRLEAMMIVANKEHLLLISGNGEIIEP 122

Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGGS+AL+A RAL   +    A EIA  ++  AA+ICV+TN+N+V++ L
Sbjct: 123 DDGILAIGSGGSFALAAGRALKTYAPHLGAREIAEASLRTAAEICVFTNNNLVVDEL 179


>gi|221508826|gb|EEE34395.1| heat shock protein HSLV, putative [Toxoplasma gondii VEG]
          Length = 338

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 2/176 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTIL VRK   V +AGDG VS GQ ++K NARKVRRL  G ++ GFAG++AD FTLLE
Sbjct: 135 HATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKVRRLQDG-VVCGFAGATADCFTLLE 193

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           +LE KLE+YP QLLRS VELAK WR D+YLR+LEA++++ADK ++L ++G+GDVLE  +G
Sbjct: 194 KLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEAVLIVADKKMSLEVSGVGDVLESHDG 253

Query: 134 VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           ++ +GSGG YA++AARAL      SA EI +++M+IAA +C +TN  ++ E L+  
Sbjct: 254 ILGVGSGGPYAVAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLENE 309


>gi|221488320|gb|EEE26534.1| heat shock protein HSLV, putative [Toxoplasma gondii GT1]
          Length = 338

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 2/176 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTIL VRK   V +AGDG VS GQ ++K NARKVRRL  G ++ GFAG++AD FTLLE
Sbjct: 135 HATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKVRRLQDG-VVCGFAGATADCFTLLE 193

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           +LE KLE+YP QLLRS VELAK WR D+YLR+LEA++++ADK ++L ++G+GDVLE  +G
Sbjct: 194 KLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEAVLIVADKKMSLEVSGVGDVLESHDG 253

Query: 134 VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           ++ +GSGG YA++AARAL      SA EI +++M+IAA +C +TN  ++ E L+  
Sbjct: 254 ILGVGSGGPYAVAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLENE 309


>gi|237833117|ref|XP_002365856.1| heat shock protein HSLV, putative [Toxoplasma gondii ME49]
 gi|211963520|gb|EEA98715.1| heat shock protein HSLV, putative [Toxoplasma gondii ME49]
          Length = 338

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 2/176 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTIL VRK   V +AGDG VS GQ ++K NARKVRRL  G ++ GFAG++AD FTLLE
Sbjct: 135 HATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKVRRLQDG-VVCGFAGATADCFTLLE 193

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           +LE KLE+YP QLLRS VELAK WR D+YLR+LEA++++ADK ++L ++G+GDVLE  +G
Sbjct: 194 KLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEAVLIVADKKMSLEVSGVGDVLESHDG 253

Query: 134 VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           ++ +GSGG YA++AARAL      SA EI +++M+IAA +C +TN  ++ E L+  
Sbjct: 254 ILGVGSGGPYAVAAARALYDIDGLSAHEICKRSMAIAASMCCHTNDRVIFEVLENE 309


>gi|88608110|ref|YP_506071.1| ATP-dependent protease peptidase subunit [Neorickettsia sennetsu
           str. Miyayama]
 gi|123492312|sp|Q2GEM5|HSLV_NEOSM RecName: Full=ATP-dependent protease subunit HslV
 gi|88600279|gb|ABD45747.1| heat shock protein HslVU, HslV subunit [Neorickettsia sennetsu str.
           Miyayama]
          Length = 188

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 105/177 (59%), Positives = 135/177 (76%), Gaps = 3/177 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            H TTIL++RKD  VV+ GDGQV++G   V+K+ A+KV+RL  G II+GFAGS+ADAFTL
Sbjct: 5   FHGTTILSIRKDDKVVMIGDGQVTMGNAVVVKSTAQKVKRLSNGKIISGFAGSTADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLE +P QLLR+ VELAKDWR DK+LR LEAM+++AD   TL++ G GDV+EPE
Sbjct: 65  FERLESKLEAHPGQLLRACVELAKDWRTDKFLRRLEAMMIVADARGTLILNGAGDVIEPE 124

Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + V AIGSGG+YAL+AA+AL   ++   A +IA  AM IAA ICV+TN N  +E + 
Sbjct: 125 DSVAAIGSGGNYALAAAKALIVHASDLDAFQIAEAAMKIAAKICVFTNENFTVEVID 181


>gi|229597233|ref|YP_001747338.2| ATP-dependent protease peptidase subunit [Pseudomonas putida W619]
          Length = 176

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 102/175 (58%), Positives = 140/175 (80%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYNGEVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +L+++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EAQLQKHSGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG+YA +AARAL++ T  SA EIA  A++IA DICV+TNHN+ +E   + +
Sbjct: 122 AMGSGGAYAQAAARALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAE 176


>gi|52080217|ref|YP_079008.1| ATP-dependent protease peptidase subunit [Bacillus licheniformis
           ATCC 14580]
 gi|52785594|ref|YP_091423.1| ATP-dependent protease peptidase subunit [Bacillus licheniformis
           ATCC 14580]
 gi|319646004|ref|ZP_08000234.1| ATP-dependent protease hslV [Bacillus sp. BT1B_CT2]
 gi|81609172|sp|Q65JN4|CLPQ_BACLD RecName: Full=ATP-dependent protease subunit ClpQ
 gi|52003428|gb|AAU23370.1| two-component ATP-dependent protease (N-terminal serine protease)
           [Bacillus licheniformis ATCC 14580]
 gi|52348096|gb|AAU40730.1| ClpQ [Bacillus licheniformis ATCC 14580]
 gi|317391754|gb|EFV72551.1| ATP-dependent protease hslV [Bacillus sp. BT1B_CT2]
          Length = 181

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 96/179 (53%), Positives = 128/179 (71%), Gaps = 4/179 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  V+ +G   +AGDGQV+ GQ  VMK  ARKVR+L  G +IAGFAGS ADAFT
Sbjct: 3   SFHATTIFAVQHNGKSAMAGDGQVTFGQAVVMKHTARKVRKLFNGKVIAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KLE+Y   L R++VELAK+WR DK LR LEAM+++ +    L+++G G+V+EP
Sbjct: 63  LFEMFEAKLEEYNGNLQRAAVELAKEWRSDKVLRKLEAMLIVMNADSMLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G++AIGSGG+YAL+A RAL      Q  A+ IAR ++  A +ICVYTN  I++E L+
Sbjct: 123 DDGILAIGSGGNYALAAGRALKRHAGSQLDAKAIARASLETAGEICVYTNDQIIVEELE 181


>gi|213853084|ref|ZP_03382616.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 171

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 99/170 (58%), Positives = 130/170 (76%), Gaps = 1/170 (0%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           +VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KL
Sbjct: 1   SVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKL 60

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGS 139
           E +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGS
Sbjct: 61  EMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGS 120

Query: 140 GGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           GG YA +AARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L   
Sbjct: 121 GGPYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEELTAK 170


>gi|225181364|ref|ZP_03734808.1| 20S proteasome A and B subunits [Dethiobacter alkaliphilus AHT 1]
 gi|225167945|gb|EEG76752.1| 20S proteasome A and B subunits [Dethiobacter alkaliphilus AHT 1]
          Length = 176

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 95/175 (54%), Positives = 126/175 (72%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            H TTI+ V K+G   +AGDGQV+ G  TVMK  A KVR + +G ++AGFAGS ADA TL
Sbjct: 2   FHGTTIVAVLKNGRCALAGDGQVTFGGNTVMKHQAIKVRPIYQGKVLAGFAGSVADAVTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E++LE+Y   L R++VELAK+WRMD+ LR LEA++L+AD    LVI+G G+++EP+
Sbjct: 62  FEKYEEQLEKYQGNLRRAAVELAKEWRMDRVLRRLEALLLVADTESLLVISGNGELIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +GV AIGSGG Y   +A      T   A E+AR+A+ IA +ICVYTN +IVLETL
Sbjct: 122 DGVTAIGSGGPYALAAARALHRHTDLDAGEVARQALLIAGEICVYTNDSIVLETL 176


>gi|225621069|ref|YP_002722327.1| ATP-dependent protease peptidase subunit [Brachyspira
           hyodysenteriae WA1]
 gi|225215889|gb|ACN84623.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Brachyspira hyodysenteriae WA1]
          Length = 182

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 99/175 (56%), Positives = 135/175 (77%), Gaps = 1/175 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI  V +DGV  IAGDGQV+LG+TVMK NA K+R+L  G +I+GFAGS+ADAFTL 
Sbjct: 8   FKGTTICAVCRDGVTAIAGDGQVTLGETVMKPNAVKLRKLYGGKVISGFAGSTADAFTLF 67

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ EK+L+++   L R++VELA++WR DK LRNL+A+I++A K   L+++G GDV+E EN
Sbjct: 68  EKFEKRLQEFSGDLTRAAVELAREWRTDKMLRNLQALIIVASKEKMLLLSGNGDVIESEN 127

Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            ++AIGSGG YA +AA AL  +T  SA+EIARK++ IA+ IC+YTN NI LE ++
Sbjct: 128 NILAIGSGGQYAKAAAMALSENTDLSAKEIARKSLEIASKICIYTNSNISLEVIE 182


>gi|94264968|ref|ZP_01288739.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
 gi|94268396|ref|ZP_01291164.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
 gi|93451623|gb|EAT02418.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
 gi|93454571|gb|EAT04849.1| 20S proteasome, A and B subunits [delta proteobacterium MLMS-1]
          Length = 176

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 91/176 (51%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + + +TT++ +R  G V +AGDGQV++G  V+K  ARK+RRL  G +I GFAG++ADAFT
Sbjct: 1   MDIRSTTVVAIRHRGQVAMAGDGQVTMGNVVVKHQARKIRRLYHGKVITGFAGATADAFT 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+LE++LE+Y   LLR++VELAK+WR D+ LR LEA+++ AD   +L+I+G GDV+EP
Sbjct: 61  LFEKLEQQLEKYGGNLLRAAVELAKEWRTDRMLRRLEALLVAADAERSLLISGNGDVIEP 120

Query: 131 ENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGGSYA +AA+ L   ++  A EI R ++ IA ++C+YTN  I LE L
Sbjct: 121 DDGILAIGSGGSYAHAAAKGLVAHSELEAAEICRASLGIAGELCIYTNEQIQLEIL 176


>gi|198284454|ref|YP_002220775.1| ATP-dependent protease peptidase subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198248975|gb|ACH84568.1| 20S proteasome A and B subunits [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 179

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 103/178 (57%), Positives = 138/178 (77%), Gaps = 2/178 (1%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            + +MH TTIL VR+   VV+AGDGQV+ G TVMK NARKVRR+  G ++ GFAG++ADA
Sbjct: 3   DSQQMHGTTILCVRRGANVVMAGDGQVTFGNTVMKGNARKVRRIDPG-VLTGFAGATADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           FTLLER E KL+ +P QL +++VELAK+WR D+ LR LEAM+ +AD   +L+I+G GDVL
Sbjct: 62  FTLLERFEAKLKAHPGQLAKAAVELAKEWRTDRVLRRLEAMLAVADDKQSLIISGQGDVL 121

Query: 129 EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +PE G++AIGSGG YAL+AARAL+ ++   A E+A++A+ IA DIC+YTNH   +E L
Sbjct: 122 DPEYGIIAIGSGGPYALAAARALLENSDLPAREVAKRALGIAGDICIYTNHQHTIEEL 179


>gi|119474654|ref|ZP_01615007.1| ATP-dependent protease peptidase subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119450857|gb|EAW32090.1| ATP-dependent protease peptidase subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 169

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 100/169 (59%), Positives = 130/169 (76%), Gaps = 1/169 (0%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +R++G  VI GDGQVS+G TVMK NARKVRRL K  +IAGFAG +ADAFTL E  E +LE
Sbjct: 1   MRRNGKAVIGGDGQVSMGNTVMKGNARKVRRLYKDQVIAGFAGGTADAFTLFELFESQLE 60

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
           +Y  QL R++VELAK WR ++ LR LEA++ +ADKT +L+ITG GDV+EPE+ ++AIGSG
Sbjct: 61  KYQGQLTRAAVELAKMWRTERSLRQLEALLAVADKTTSLIITGNGDVIEPEDNLIAIGSG 120

Query: 141 GSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           G YA SAA+AL+ +T  SA +I  ++++IA DICVYTNHN  +E L   
Sbjct: 121 GPYAQSAAKALLENTDLSAHDIVERSLAIAGDICVYTNHNRTIEELDCE 169


>gi|91794709|ref|YP_564360.1| ATP-dependent protease peptidase subunit [Shewanella denitrificans
           OS217]
 gi|122968445|sp|Q12IT9|HSLV_SHEDO RecName: Full=ATP-dependent protease subunit HslV
 gi|91716711|gb|ABE56637.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Shewanella denitrificans OS217]
          Length = 174

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 102/172 (59%), Positives = 132/172 (76%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNARKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   LL+S+VELAKDWR DK LR LEAM+++AD   +L+ITG GDV++PE+ ++
Sbjct: 62  EAKLEMHQGHLLKSAVELAKDWRTDKMLRKLEAMLVVADTEASLIITGNGDVVQPEHDLI 121

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG+Y   +A   L +T+ SA+EIA K+++IA DICV+TN    +E L 
Sbjct: 122 AIGSGGNYAQAAALALLQNTELSAQEIADKSLTIAGDICVFTNQFKTIEQLD 173


>gi|226946554|ref|YP_002801627.1| ATP-dependent protease peptidase subunit [Azotobacter vinelandii
           DJ]
 gi|226721481|gb|ACO80652.1| heat shock protein HslV [Azotobacter vinelandii DJ]
          Length = 180

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 96/174 (55%), Positives = 131/174 (75%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL  G ++AGFAG++ADAFTL ER 
Sbjct: 7   TTIVSVRRQGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 66

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR ++ L  LEAM+ +A+K  +L+ITG GDV+EPE G++
Sbjct: 67  EGQLEKHQGHLVRAAVELAKDWRTERSLSRLEAMLAVANKDASLIITGNGDVVEPEEGLI 126

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           A+GSGG Y   +A   L+ T  SA E+A  A++IA  ICV+TN N+ +E L + 
Sbjct: 127 AMGSGGPYAQAAAKALLLHTGLSAREVAETALNIAGSICVFTNQNLTIEELDLD 180


>gi|88658351|ref|YP_507783.1| ATP-dependent protease peptidase subunit [Ehrlichia chaffeensis
           str. Arkansas]
 gi|123492805|sp|Q2GFK0|HSLV_EHRCR RecName: Full=ATP-dependent protease subunit HslV
 gi|88599808|gb|ABD45277.1| ATP-dependent protease HslV [Ehrlichia chaffeensis str. Arkansas]
          Length = 189

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 109/189 (57%), Positives = 147/189 (77%), Gaps = 7/189 (3%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  K  +  M+ TTIL +R+   V+IAGDGQVSLG TV+K +A+K++RL    +I GFAG
Sbjct: 1   MEHKDNS-TMYGTTILCIRRGNKVIIAGDGQVSLGHTVIKNSAKKIKRLANDTVITGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++L+I+G
Sbjct: 60  ATADAFTLFERLESKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARAL------MSTQNSAEEIARKAMSIAADICVYTN 177
            GDVLEPENG+ AIGSGG+YAL+AA+AL       S   + E I   AM IA++IC+YTN
Sbjct: 120 NGDVLEPENGIAAIGSGGNYALAAAKALCESNDQFSQNMTLEYIITTAMKIASEICIYTN 179

Query: 178 HNIVLETLK 186
           +NI++E ++
Sbjct: 180 NNIIMEKIE 188


>gi|315302917|ref|ZP_07873650.1| ATP-dependent protease HslVU, peptidase subunit [Listeria ivanovii
           FSL F6-596]
 gi|313628713|gb|EFR97113.1| ATP-dependent protease HslVU, peptidase subunit [Listeria ivanovii
           FSL F6-596]
          Length = 181

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 96/179 (53%), Positives = 128/179 (71%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++HATTI  V  DG   +AGDGQV+LG   VMK  A+KVRRL    +IAGFAGS ADAF
Sbjct: 3   MELHATTIFAVHHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KL +Y   L R+SVELA+ WR D  LR LEAM+++ DK   L+++G G+V+E
Sbjct: 63  TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 122

Query: 130 PENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G++AIGSGG+YAL+A RAL         A++IAR A+ IA++ICV+TN  I +E L
Sbjct: 123 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIASEICVFTNDQITVEEL 181


>gi|213018560|ref|ZP_03334368.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995511|gb|EEB56151.1| heat shock protein HslV [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 176

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 118/175 (67%), Positives = 151/175 (86%), Gaps = 1/175 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M+ TTIL++R+D  VV+ GDGQVSLG TV+K+ ARKVRRL   ++IAGFAG++ADAFTL 
Sbjct: 1   MYGTTILSIRRDKNVVVIGDGQVSLGHTVIKSGARKVRRLSGDSVIAGFAGATADAFTLF 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KL+++P QL+R+ VELAKDWRMDKYLR LEAM+++ADK+I+LVITG GDVLEPE+
Sbjct: 61  ERLESKLDKHPGQLMRACVELAKDWRMDKYLRKLEAMMIVADKSISLVITGTGDVLEPED 120

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           G+ AIGSGG++ALSAA+AL+     S EEIA+KAM IAADICVYTNHN+++E ++
Sbjct: 121 GIAAIGSGGNFALSAAKALIDVEGISIEEIAKKAMKIAADICVYTNHNLIIEKIE 175


>gi|16078678|ref|NP_389497.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309490|ref|ZP_03591337.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313815|ref|ZP_03595620.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318739|ref|ZP_03600033.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323010|ref|ZP_03604304.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321315381|ref|YP_004207668.1| ATP-dependent protease subunit HslV [Bacillus subtilis BSn5]
 gi|729778|sp|P39070|CLPQ_BACSU RecName: Full=ATP-dependent protease subunit ClpQ
 gi|73535734|pdb|1YYF|D Chain D, Correction Of X-Ray Intensities From An Hslv-Hslu Co-
           Crystal Containing Lattice Translocation Defects
 gi|73535735|pdb|1YYF|C Chain C, Correction Of X-Ray Intensities From An Hslv-Hslu Co-
           Crystal Containing Lattice Translocation Defects
 gi|535349|gb|AAB03370.1| CodW [Bacillus subtilis subsp. subtilis str. JH642]
 gi|2633987|emb|CAB13488.1| two-component ATP-dependent protease (N-terminal serine protease)
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|291484166|dbj|BAI85241.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
           natto BEST195]
 gi|320021655|gb|ADV96641.1| ATP-dependent protease subunit HslV [Bacillus subtilis BSn5]
          Length = 181

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  V+  G   ++GDGQV+ GQ  VMK  ARKVR+L  G ++AGFAGS ADAFT
Sbjct: 3   SFHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KLE+Y   L R++VELAK+WR DK LR LEAM+++ ++   L+++G G+V+EP
Sbjct: 63  LFEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G++AIGSGG+YAL+A RAL        SA EIAR A+  A +ICVYTN  I+LE L+
Sbjct: 123 DDGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE 181


>gi|77361645|ref|YP_341220.1| ATP-dependent protease peptidase subunit [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76876556|emb|CAI87778.1| peptidase component of the HslUV protease [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 172

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VVI GDGQVSLG TVMK NARKVRRL  G +IAGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGNNVVIGGDGQVSLGNTVMKGNARKVRRLYNGKVIAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L +++VE+AKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++
Sbjct: 62  ESKLEMHQGNLTKAAVEMAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG++A SAA AL+ +T  SA EI  K+++IA +ICV+TN    +E L
Sbjct: 122 AIGSGGNFAQSAATALLENTDLSAREIVEKSLTIAGNICVFTNDFQTIEEL 172


>gi|322382309|ref|ZP_08056216.1| ATP-dependent protease peptidase subunit-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153662|gb|EFX46037.1| ATP-dependent protease peptidase subunit-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 183

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 102/188 (54%), Positives = 140/188 (74%), Gaps = 8/188 (4%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIA 59
           M +M      +  HATTI  +R+DG   IAGDGQV+ G   +MK  A+KVRRL +G +IA
Sbjct: 1   MNLMN-----MSFHATTIFAMRRDGEGAIAGDGQVTFGENMIMKQTAKKVRRLYRGKVIA 55

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
           GFAGS ADA TL E+ E KLE++   L R++VELAKDWR D+ LR LEAM+++ D +  L
Sbjct: 56  GFAGSVADAITLFEKFEGKLEEHHGNLQRAAVELAKDWRSDRVLRKLEAMLIVMDTSGLL 115

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTN 177
           +I+G G+++EP++G++AIGSGGS+ALSA RAL   + Q SA++IA+ ++ +AADICVYTN
Sbjct: 116 LISGNGEIIEPDDGIIAIGSGGSFALSAGRALAKYAPQMSAKDIAKASLEMAADICVYTN 175

Query: 178 HNIVLETL 185
           HNI++E L
Sbjct: 176 HNIIVEEL 183


>gi|229544387|ref|ZP_04433445.1| 20S proteasome A and B subunits [Bacillus coagulans 36D1]
 gi|229324872|gb|EEN90549.1| 20S proteasome A and B subunits [Bacillus coagulans 36D1]
          Length = 180

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 96/178 (53%), Positives = 132/178 (74%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  +R +G   +AGDGQV+LG +V MK  A+KVRRL  G ++AGFAGS ADAFT
Sbjct: 3   DFHATTIFAIRHNGKSAMAGDGQVTLGNSVVMKNTAKKVRRLFNGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KL++Y   L R++VELAK WR DK LR LEAM+++ D+   L+++G G+V+EP
Sbjct: 63  LSEMFEGKLQEYNGNLTRAAVELAKMWRSDKVLRKLEAMLIVMDENNLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YAL+A RAL        +A+EIAR ++ IA++ICV+TN NI++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRALKRHAAENFTAKEIARASLEIASEICVFTNSNIIVEEL 180


>gi|307942726|ref|ZP_07658071.1| ATP-dependent protease HslVU, peptidase subunit [Roseibium sp.
           TrichSKD4]
 gi|307773522|gb|EFO32738.1| ATP-dependent protease HslVU, peptidase subunit [Roseibium sp.
           TrichSKD4]
          Length = 186

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 124/186 (66%), Positives = 145/186 (77%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +       H TTI+ VRK G VVIAGDGQVSLG TV+K  ARKVR L KG +IAGFAG
Sbjct: 1   MSESRSQDIWHGTTIVMVRKGGEVVIAGDGQVSLGPTVIKHTARKVRPLAKGKVIAGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+ADK  +L +TG
Sbjct: 61  ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKNTSLALTG 120

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
            GDVLEPE GVM IGSGG+YAL+AA+AL  T   AE IARKAM++AADICVYTN ++ +E
Sbjct: 121 TGDVLEPEGGVMGIGSGGNYALAAAKALADTDADAETIARKAMAVAADICVYTNDSVTVE 180

Query: 184 TLKVGD 189
            LK  D
Sbjct: 181 KLKAAD 186


>gi|308051234|ref|YP_003914800.1| HslV component of HslUV peptidase [Ferrimonas balearica DSM 9799]
 gi|307633424|gb|ADN77726.1| HslV component of HslUV peptidase [Ferrimonas balearica DSM 9799]
          Length = 178

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 92/174 (52%), Positives = 124/174 (71%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VVIAGDGQVSLG TVMK NARKVR L  G ++AGFAG++ADAFTL E L
Sbjct: 2   TTIVSVRRGDKVVIAGDGQVSLGNTVMKGNARKVRHLHGGKVLAGFAGATADAFTLFELL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KL  +   L R++VELAK WR ++ L+ LEAM+++AD   +L+I+G GDV+EPE+ ++
Sbjct: 62  ESKLTAHQGHLTRAAVELAKAWRTERSLQKLEAMLIVADAETSLLISGNGDVVEPEHDII 121

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG+Y   +    L +T   A +I  KA++IA +ICV+TN    +E L   
Sbjct: 122 AIGSGGNYAQAAGLALLQNTDLGARDICEKALTIAGEICVFTNLTQTIEELDAK 175


>gi|95928613|ref|ZP_01311360.1| 20S proteasome, A and B subunits [Desulfuromonas acetoxidans DSM
           684]
 gi|95135403|gb|EAT17055.1| 20S proteasome, A and B subunits [Desulfuromonas acetoxidans DSM
           684]
          Length = 176

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 98/174 (56%), Positives = 130/174 (74%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI+ VR+D  V +AGDGQV+LG TVMK  A K+RR+    IIAGFAGS+ADAFTL 
Sbjct: 2   FRGTTIVCVRRDDQVTLAGDGQVTLGHTVMKHGACKIRRMHNDQIIAGFAGSTADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ E KL+++  QL R++V LAKDWR D+ LR LEA++L+AD+  TLVI+G+GDV+E ++
Sbjct: 62  EKFEAKLQEFRGQLARAAVALAKDWRNDRVLRRLEALLLVADRDQTLVISGVGDVIESDD 121

Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           GV AIGSGG Y   +A   L +T    E+IA +A++IAA+IC+YTN NI +ETL
Sbjct: 122 GVAAIGSGGPYAQAAARALLRNTDMVPEQIAEQALTIAAEICIYTNDNISMETL 175


>gi|205373365|ref|ZP_03226169.1| ATP-dependent protease peptidase subunit [Bacillus coahuilensis
           m4-4]
          Length = 180

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 94/178 (52%), Positives = 131/178 (73%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + HATTI  V+ +G   ++GDGQV+ G   VMK  ARKVR+L    ++AGFAGS ADAFT
Sbjct: 3   QFHATTIFAVQHNGKSAMSGDGQVTFGNAVVMKHTARKVRKLFHDQVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E +LE+Y   L R++VELAK+WR D+ LR LEAM+++ +K    +++G G+V+EP
Sbjct: 63  LFEKFEARLEEYNGNLQRAAVELAKEWRTDQVLRKLEAMLIVMNKEHIYLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YALSA RAL        +A+EIA+ ++ +AADICVYTNH I+LE L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKYSGEHMTAKEIAKASLEVAADICVYTNHQIILEEL 180


>gi|52424326|ref|YP_087463.1| ATP-dependent protease peptidase subunit [Mannheimia
           succiniciproducens MBEL55E]
 gi|85542205|sp|Q65VY2|HSLV_MANSM RecName: Full=ATP-dependent protease subunit HslV
 gi|52306378|gb|AAU36878.1| HslV protein [Mannheimia succiniciproducens MBEL55E]
          Length = 173

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 92/171 (53%), Positives = 127/171 (74%), Gaps = 2/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRK+G V I GDGQ +LG  V K   RKVRRL K  ++ GFAGS+ADAF L +  
Sbjct: 2   TTIVCVRKNGKVAIGGDGQATLGNCVEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++++VELAK+WR ++ LR LEAM+++A+++  L+++G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLVKAAVELAKEWRTERSLRRLEAMMIVANESEFLLVSGSGDVIEPEFDVL 121

Query: 136 AIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG++A SAA AL+ T  + SA EI ++A+ IA DI +YTNHN V+E 
Sbjct: 122 AIGSGGNFAKSAALALLRTNNELSAAEIVKQALIIAGDIDIYTNHNHVIEE 172


>gi|15600246|ref|NP_253740.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
           PAO1]
 gi|116053201|ref|YP_793522.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218894152|ref|YP_002443021.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
           LESB58]
 gi|254238240|ref|ZP_04931563.1| heat shock protein HslV [Pseudomonas aeruginosa C3719]
 gi|254244065|ref|ZP_04937387.1| heat shock protein HslV [Pseudomonas aeruginosa 2192]
 gi|296391900|ref|ZP_06881375.1| ATP-dependent protease peptidase subunit [Pseudomonas aeruginosa
           PAb1]
 gi|313110091|ref|ZP_07795993.1| heat shock protein HslV [Pseudomonas aeruginosa 39016]
 gi|21759208|sp|Q9HUC6|HSLV_PSEAE RecName: Full=ATP-dependent protease subunit HslV
 gi|122256784|sp|Q02EW4|HSLV_PSEAB RecName: Full=ATP-dependent protease subunit HslV
 gi|226704546|sp|B7V3E6|HSLV_PSEA8 RecName: Full=ATP-dependent protease subunit HslV
 gi|9951344|gb|AAG08438.1|AE004918_8 heat shock protein HslV [Pseudomonas aeruginosa PAO1]
 gi|115588422|gb|ABJ14437.1| heat shock protein HslV [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170171|gb|EAZ55682.1| heat shock protein HslV [Pseudomonas aeruginosa C3719]
 gi|126197443|gb|EAZ61506.1| heat shock protein HslV [Pseudomonas aeruginosa 2192]
 gi|218774380|emb|CAW30197.1| heat shock protein HslV [Pseudomonas aeruginosa LESB58]
 gi|310882495|gb|EFQ41089.1| heat shock protein HslV [Pseudomonas aeruginosa 39016]
          Length = 177

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 95/174 (54%), Positives = 133/174 (76%), Gaps = 2/174 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL  G ++AGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E++LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 121

Query: 136 AIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           A+GSGG +  A + A    + + SA E+A  A++IA  ICV+TN N+ +E L  
Sbjct: 122 AMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEELDS 175


>gi|329900880|ref|ZP_08272629.1| ATP-dependent protease HslV [Oxalobacteraceae bacterium IMCC9480]
 gi|327549353|gb|EGF33924.1| ATP-dependent protease HslV [Oxalobacteraceae bacterium IMCC9480]
          Length = 178

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTIL+VR+  +V + GDGQV+LG  VMK  ARKVR+L  G ++AGFAG +ADAFTL
Sbjct: 3   QFHGTTILSVRRGKLVALGGDGQVTLGNIVMKGTARKVRKLYNGKVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +E  E KLE+Y   L+R+SVELAK+WR D+ LR LEAM+L+AD   TLVITG GDVLEPE
Sbjct: 63  IELFEAKLEKYQGNLMRASVELAKNWRTDRMLRRLEAMLLVADHETTLVITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +G+ AIGSGG++A SAA+AL  +T+ S  +I RK+++IA ++C+YTN +  +ETL+
Sbjct: 123 DGIGAIGSGGAFAQSAAKALQENTELSPADIVRKSLTIAGELCIYTNLSHTIETLE 178


>gi|56419748|ref|YP_147066.1| ATP-dependent protease peptidase subunit [Geobacillus kaustophilus
           HTA426]
 gi|261419413|ref|YP_003253095.1| ATP-dependent protease peptidase subunit [Geobacillus sp. Y412MC61]
 gi|297530612|ref|YP_003671887.1| 20S proteasome A and subunit betas [Geobacillus sp. C56-T3]
 gi|319766228|ref|YP_004131729.1| 20S proteasome A and B subunits [Geobacillus sp. Y412MC52]
 gi|81347625|sp|Q5L0N2|HSLV_GEOKA RecName: Full=ATP-dependent protease subunit HslV
 gi|56379590|dbj|BAD75498.1| proteasome Clp protease subunit [Geobacillus kaustophilus HTA426]
 gi|261375870|gb|ACX78613.1| 20S proteasome A and B subunits [Geobacillus sp. Y412MC61]
 gi|297253864|gb|ADI27310.1| 20S proteasome A and B subunits [Geobacillus sp. C56-T3]
 gi|317111094|gb|ADU93586.1| 20S proteasome A and B subunits [Geobacillus sp. Y412MC52]
          Length = 180

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 132/177 (74%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  +R +G   +AGDGQV+ G   VMK  A+KVRRL +GN++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAIRHNGASAMAGDGQVTFGNAVVMKHTAKKVRRLFQGNVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLEQ+   L R++VELAK+WR DK LR LEAM+++ DK   L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEQWNGNLPRAAVELAKEWRSDKVLRRLEAMLIVMDKQHLLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG YAL+A RAL        +A+EIA+ A+ IAADICVYTN +I++E L
Sbjct: 124 DGMLAIGSGGQYALAAGRALKKYAGGSMTAKEIAKAALEIAADICVYTNGHIIVEEL 180


>gi|296330830|ref|ZP_06873305.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674348|ref|YP_003866020.1| two-component ATP-dependent protease (N-terminal serine protease)
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151835|gb|EFG92709.1| ATP-dependent protease peptidase subunit [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305412592|gb|ADM37711.1| two-component ATP-dependent protease (N-terminal serine protease)
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 181

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  V+  G   ++GDGQV+ GQ  VMK  ARKVR+L  G ++AGFAGS ADAFT
Sbjct: 3   SFHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KLE+Y   L R++VELAK+WR DK LR LEAM+++ ++   L+++G G+V+EP
Sbjct: 63  LFEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G++AIGSGG+YAL+A RAL        SA EIAR A+  A +ICVYTN  I+LE L+
Sbjct: 123 DDGILAIGSGGNYALAAGRALKKHAGDSMSASEIARAALETAGEICVYTNDQIILEELE 181


>gi|222112160|ref|YP_002554424.1| ATP-dependent protease peptidase subunit [Acidovorax ebreus TPSY]
 gi|254802411|sp|B9MFS3|HSLV_ACIET RecName: Full=ATP-dependent protease subunit HslV
 gi|221731604|gb|ACM34424.1| 20S proteasome A and B subunits [Acidovorax ebreus TPSY]
          Length = 181

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 98/179 (54%), Positives = 135/179 (75%), Gaps = 5/179 (2%)

Query: 12  KMHATTILTVRKD--GV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           + H TTIL+VR+       V + GDGQV+LG  V+K  ARKVR+L +G ++AGFAG++AD
Sbjct: 3   QYHGTTILSVRRQTADGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ER E KLE++  QL R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 63  AFTLFERFEAKLEKHQGQLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           LEPE G++AIGSGG+YA SAA+AL+ +T   A EI +K++ IA ++C+YTN +  +ETL
Sbjct: 123 LEPEQGIVAIGSGGAYAHSAAKALLSNTDLPAAEIVKKSLEIAGELCIYTNMHHTIETL 181


>gi|189346636|ref|YP_001943165.1| ATP-dependent protease peptidase subunit [Chlorobium limicola DSM
           245]
 gi|238692148|sp|B3ECB1|HSLV_CHLL2 RecName: Full=ATP-dependent protease subunit HslV
 gi|189340783|gb|ACD90186.1| 20S proteasome A and B subunits [Chlorobium limicola DSM 245]
          Length = 182

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 95/183 (51%), Positives = 134/183 (73%), Gaps = 2/183 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           MG +   + + +TT+L V +DG   +  DGQ++LG TV+K + RK+R L  G II GFAG
Sbjct: 1   MGQESKPL-IRSTTVLGVIRDGKAALGSDGQMTLGNTVLKHSTRKIRSLYHGRIITGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TLL+R E+KL+ Y  +L R++VELA+DWR DKYLR LEAM+ +  +   L+I+G
Sbjct: 60  ATADAVTLLDRFEEKLDAYGGKLERAAVELARDWRTDKYLRRLEAMLAVVSQDKALIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+EPE+ ++AIGSG  YAL+AAR+L+  T  SA EI  +++ IAADIC+YTN +IV+
Sbjct: 120 TGDVIEPEDSIVAIGSGSMYALAAARSLLKHTPLSAREIVSESLKIAADICIYTNDHIVI 179

Query: 183 ETL 185
           E L
Sbjct: 180 EEL 182


>gi|157692294|ref|YP_001486756.1| ATP-dependent protease peptidase subunit [Bacillus pumilus
           SAFR-032]
 gi|194014435|ref|ZP_03053052.1| ATP-dependent protease HslV [Bacillus pumilus ATCC 7061]
 gi|166918419|sp|A8FD79|CLPQ_BACP2 RecName: Full=ATP-dependent protease subunit ClpQ
 gi|157681052|gb|ABV62196.1| T01 family HslU component of HslUV peptidase [Bacillus pumilus
           SAFR-032]
 gi|194013461|gb|EDW23026.1| ATP-dependent protease HslV [Bacillus pumilus ATCC 7061]
          Length = 181

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  V+  G   +AGDGQV+ GQ  VMK  A+KVRRL  G ++AGFAGS ADAFT
Sbjct: 3   SFHATTIFAVQHKGKSAMAGDGQVTFGQAVVMKHTAKKVRRLFGGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KLE+Y   L R++VELAK+WR DK LR LEAM+++ +K   L+++G G+V+EP
Sbjct: 63  LFEKFETKLEEYGGNLKRAAVELAKEWRSDKMLRQLEAMLIVMNKDSILLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G++AIGSGG+YALSA RAL +      +A +IA+ A+  A +ICVYTN  I LE L+
Sbjct: 123 DDGILAIGSGGNYALSAGRALKTHAGDHLTARDIAKAALETAGEICVYTNDQITLEELE 181


>gi|121595972|ref|YP_987868.1| ATP-dependent protease peptidase subunit [Acidovorax sp. JS42]
 gi|120608052|gb|ABM43792.1| HslV component of HslUV peptidase [Acidovorax sp. JS42]
          Length = 193

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 98/179 (54%), Positives = 135/179 (75%), Gaps = 5/179 (2%)

Query: 12  KMHATTILTVRKD--GV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           + H TTIL+VR+       V + GDGQV+LG  V+K  ARKVR+L +G ++AGFAG++AD
Sbjct: 15  QYHGTTILSVRRQTADGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATAD 74

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ER E KLE++  QL R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 75  AFTLFERFEAKLEKHQGQLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDV 134

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           LEPE G++AIGSGG+YA SAA+AL+ +T   A EI +K++ IA ++C+YTN +  +ETL
Sbjct: 135 LEPEQGIIAIGSGGAYAHSAAKALLSNTDLPAAEIVKKSLEIAGELCIYTNMHHTIETL 193


>gi|94987174|ref|YP_595107.1| ATP-dependent protease peptidase subunit [Lawsonia intracellularis
           PHE/MN1-00]
 gi|166222983|sp|Q1MQE1|HSLV_LAWIP RecName: Full=ATP-dependent protease subunit HslV
 gi|94731423|emb|CAJ54786.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 177

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 99/177 (55%), Positives = 133/177 (75%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++  TTIL VR  G V +AGDGQV+LGQ+V MK  A+KVRR+ K  +IAGFAG++ADAF
Sbjct: 1   MEIRGTTILAVRHKGHVALAGDGQVTLGQSVVMKHTAKKVRRMYKNQVIAGFAGTTADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER +  LE+    L+R++VELAK+WR DKYLR LEAM+L+ DK  T V++G GDV+E
Sbjct: 61  TLFERFDNYLEETNGNLVRAAVELAKEWRKDKYLRRLEAMLLVVDKDHTFVLSGTGDVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G+ AIGSGG Y   +A   +  ++ SA EIAR++M I A+ICV+TN N+ LETL
Sbjct: 121 PDDGIAAIGSGGLYAVAAARALVAHSELSAAEIARESMRITAEICVFTNLNLTLETL 177


>gi|163941568|ref|YP_001646452.1| ATP-dependent protease peptidase subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|229013013|ref|ZP_04170178.1| ATP-dependent protease hslV [Bacillus mycoides DSM 2048]
 gi|229061433|ref|ZP_04198778.1| ATP-dependent protease hslV [Bacillus cereus AH603]
 gi|229134637|ref|ZP_04263447.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST196]
 gi|229168569|ref|ZP_04296292.1| ATP-dependent protease hslV [Bacillus cereus AH621]
 gi|229486308|sp|A9VT68|HSLV_BACWK RecName: Full=ATP-dependent protease subunit HslV
 gi|163863765|gb|ABY44824.1| 20S proteasome A and B subunits [Bacillus weihenstephanensis KBAB4]
 gi|228614975|gb|EEK72077.1| ATP-dependent protease hslV [Bacillus cereus AH621]
 gi|228648898|gb|EEL04923.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST196]
 gi|228717856|gb|EEL69504.1| ATP-dependent protease hslV [Bacillus cereus AH603]
 gi|228748267|gb|EEL98127.1| ATP-dependent protease hslV [Bacillus mycoides DSM 2048]
          Length = 180

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 98/177 (55%), Positives = 131/177 (74%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  V  +G   +AGDGQV++G   VMK  ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM+++ DKT  L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG YAL+A RAL        +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGHYALAAGRALKQHASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180


>gi|193212785|ref|YP_001998738.1| ATP-dependent protease peptidase subunit [Chlorobaculum parvum NCIB
           8327]
 gi|238692641|sp|B3QNN5|HSLV_CHLP8 RecName: Full=ATP-dependent protease subunit HslV
 gi|193086262|gb|ACF11538.1| 20S proteasome A and B subunits [Chlorobaculum parvum NCIB 8327]
          Length = 181

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 98/179 (54%), Positives = 131/179 (73%), Gaps = 1/179 (0%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               ++ +TT+L V +DG   +  DGQ++LG TVMK + RK+R L +G  + GFAG++AD
Sbjct: 3   QQKPQIRSTTVLGVLRDGKAALGSDGQMTLGNTVMKHSTRKIRSLYQGKFVTGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           A TLLER E KLE Y  +L R++VELAKDWR DKYLR LEAM+ +      L+I+G GDV
Sbjct: 63  ALTLLERFEAKLEAYSGRLDRAAVELAKDWRTDKYLRRLEAMLAVVSSDKALIISGTGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +EPE+G++AIGSG  YAL+AARALM  T  SAEEI R+++  AA+IC+YTN +I +ETL
Sbjct: 123 IEPEDGIVAIGSGSMYALAAARALMKHTTLSAEEIVRESLQTAAEICIYTNDHIAIETL 181


>gi|49081626|gb|AAT50213.1| PA5053 [synthetic construct]
          Length = 178

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 95/174 (54%), Positives = 133/174 (76%), Gaps = 2/174 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL  G ++AGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLHHGQVLAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E++LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EQQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLI 121

Query: 136 AIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           A+GSGG +  A + A    + + SA E+A  A++IA  ICV+TN N+ +E L  
Sbjct: 122 AMGSGGGFAQAAALALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEELDS 175


>gi|311068136|ref|YP_003973059.1| ATP-dependent protease peptidase subunit [Bacillus atrophaeus 1942]
 gi|310868653|gb|ADP32128.1| ATP-dependent protease peptidase subunit [Bacillus atrophaeus 1942]
          Length = 181

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  V+ +G   ++GDGQV+ GQ  VMK  ARKVR+L  G ++AGFAGS ADAFT
Sbjct: 3   SFHATTIFAVQHNGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KLE+Y   L R+SVELAK+WR DK LR LEAM+++ ++   L+++G G+V+EP
Sbjct: 63  LFEMFEAKLEEYNGNLKRASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G++AIGSGG+YAL+A RAL        SA EIA+ A+  A +ICVYTN  I+LE L+
Sbjct: 123 DDGILAIGSGGNYALAAGRALKKHAGESLSAREIAQAALETAGEICVYTNDQIILEELE 181


>gi|222097275|ref|YP_002531332.1| ATP-dependent protease peptidase subunit [Bacillus cereus Q1]
 gi|254802332|sp|B9IVB9|HSLV_BACCQ RecName: Full=ATP-dependent protease subunit HslV
 gi|221241333|gb|ACM14043.1| ATP-dependent protease hslV [Bacillus cereus Q1]
          Length = 180

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 134/177 (75%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  V  +G   +AGDGQV++G   VMK  ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM+++ DKT  L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG+YALSA RAL    S   +A++IA+ +++IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLNIAGDICVYTNHNIIVEEL 180


>gi|30021918|ref|NP_833549.1| ATP-dependent protease peptidase subunit [Bacillus cereus ATCC
           14579]
 gi|30263834|ref|NP_846211.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
           Ames]
 gi|47529258|ref|YP_020607.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49186680|ref|YP_029932.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
           Sterne]
 gi|49479415|ref|YP_037891.1| ATP-dependent protease peptidase subunit [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52141659|ref|YP_085171.1| ATP-dependent protease peptidase subunit [Bacillus cereus E33L]
 gi|65321157|ref|ZP_00394116.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Bacillus anthracis str. A2012]
 gi|118479052|ref|YP_896203.1| ATP-dependent protease peptidase subunit [Bacillus thuringiensis
           str. Al Hakam]
 gi|165873315|ref|ZP_02217920.1| ATP-dependent protease hslV [Bacillus anthracis str. A0488]
 gi|167642026|ref|ZP_02400256.1| ATP-dependent protease hslV [Bacillus anthracis str. A0193]
 gi|170689660|ref|ZP_02880840.1| ATP-dependent protease hslV [Bacillus anthracis str. A0465]
 gi|170709360|ref|ZP_02899774.1| ATP-dependent protease hslV [Bacillus anthracis str. A0389]
 gi|177655994|ref|ZP_02937121.1| ATP-dependent protease hslV [Bacillus anthracis str. A0174]
 gi|196047760|ref|ZP_03114953.1| ATP-dependent protease hslV [Bacillus cereus 03BB108]
 gi|206972727|ref|ZP_03233663.1| ATP-dependent protease hslV [Bacillus cereus AH1134]
 gi|218233809|ref|YP_002368631.1| ATP-dependent protease peptidase subunit [Bacillus cereus B4264]
 gi|218904958|ref|YP_002452792.1| ATP-dependent protease hslV [Bacillus cereus AH820]
 gi|225865811|ref|YP_002751189.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus cereus
           03BB102]
 gi|227813262|ref|YP_002813271.1| ATP-dependent protease hslV [Bacillus anthracis str. CDC 684]
 gi|228916467|ref|ZP_04080033.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228922584|ref|ZP_04085884.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228928878|ref|ZP_04091910.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935144|ref|ZP_04097971.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228947549|ref|ZP_04109839.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228954106|ref|ZP_04116135.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228960046|ref|ZP_04121710.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228986973|ref|ZP_04147099.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229047516|ref|ZP_04193106.1| ATP-dependent protease hslV [Bacillus cereus AH676]
 gi|229071328|ref|ZP_04204551.1| ATP-dependent protease hslV [Bacillus cereus F65185]
 gi|229081085|ref|ZP_04213595.1| ATP-dependent protease hslV [Bacillus cereus Rock4-2]
 gi|229111301|ref|ZP_04240854.1| ATP-dependent protease hslV [Bacillus cereus Rock1-15]
 gi|229123344|ref|ZP_04252548.1| ATP-dependent protease hslV [Bacillus cereus 95/8201]
 gi|229129106|ref|ZP_04258079.1| ATP-dependent protease hslV [Bacillus cereus BDRD-Cer4]
 gi|229146401|ref|ZP_04274772.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST24]
 gi|229152029|ref|ZP_04280224.1| ATP-dependent protease hslV [Bacillus cereus m1550]
 gi|229157406|ref|ZP_04285484.1| ATP-dependent protease hslV [Bacillus cereus ATCC 4342]
 gi|229162766|ref|ZP_04290723.1| ATP-dependent protease hslV [Bacillus cereus R309803]
 gi|229180106|ref|ZP_04307450.1| ATP-dependent protease hslV [Bacillus cereus 172560W]
 gi|229186069|ref|ZP_04313239.1| ATP-dependent protease hslV [Bacillus cereus BGSC 6E1]
 gi|229191999|ref|ZP_04318969.1| ATP-dependent protease hslV [Bacillus cereus ATCC 10876]
 gi|229603703|ref|YP_002868068.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus anthracis
           str. A0248]
 gi|254683463|ref|ZP_05147323.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721984|ref|ZP_05183773.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
           A1055]
 gi|254735868|ref|ZP_05193574.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
           Western North America USA6153]
 gi|254739606|ref|ZP_05197300.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
           Kruger B]
 gi|254751199|ref|ZP_05203238.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
           Vollum]
 gi|301055320|ref|YP_003793531.1| ATP-dependent protease peptidase subunit [Bacillus anthracis CI]
 gi|47605666|sp|Q819X6|HSLV_BACCR RecName: Full=ATP-dependent protease subunit HslV
 gi|47605672|sp|Q81WK5|HSLV_BACAN RecName: Full=ATP-dependent protease subunit HslV
 gi|77416826|sp|Q636J6|HSLV_BACCZ RecName: Full=ATP-dependent protease subunit HslV
 gi|85542194|sp|Q6HEY5|HSLV_BACHK RecName: Full=ATP-dependent protease subunit HslV
 gi|166221624|sp|A0RHK3|HSLV_BACAH RecName: Full=ATP-dependent protease subunit HslV
 gi|226704533|sp|B7JJA8|HSLV_BACC0 RecName: Full=ATP-dependent protease subunit HslV
 gi|226704535|sp|B7HDV3|HSLV_BACC4 RecName: Full=ATP-dependent protease subunit HslV
 gi|254802329|sp|C3P5N2|HSLV_BACAA RecName: Full=ATP-dependent protease subunit HslV
 gi|254802330|sp|C3L797|HSLV_BACAC RecName: Full=ATP-dependent protease subunit HslV
 gi|254802331|sp|C1EP54|HSLV_BACC3 RecName: Full=ATP-dependent protease subunit HslV
 gi|29897474|gb|AAP10750.1| ATP-dependent protease hslV [Bacillus cereus ATCC 14579]
 gi|30258478|gb|AAP27697.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus anthracis
           str. Ames]
 gi|47504406|gb|AAT33082.1| ATP-dependent protease hslV [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49180607|gb|AAT55983.1| ATP-dependent protease hslV [Bacillus anthracis str. Sterne]
 gi|49330971|gb|AAT61617.1| ATP-dependent protease hslV (heat shock protein HslV) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51975128|gb|AAU16678.1| ATP-dependent protease (heat shock protein) [Bacillus cereus E33L]
 gi|118418277|gb|ABK86696.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Bacillus thuringiensis str. Al
           Hakam]
 gi|164710953|gb|EDR16525.1| ATP-dependent protease hslV [Bacillus anthracis str. A0488]
 gi|167510006|gb|EDR85422.1| ATP-dependent protease hslV [Bacillus anthracis str. A0193]
 gi|170125734|gb|EDS94647.1| ATP-dependent protease hslV [Bacillus anthracis str. A0389]
 gi|170666384|gb|EDT17167.1| ATP-dependent protease hslV [Bacillus anthracis str. A0465]
 gi|172079893|gb|EDT65001.1| ATP-dependent protease hslV [Bacillus anthracis str. A0174]
 gi|196021408|gb|EDX60122.1| ATP-dependent protease hslV [Bacillus cereus 03BB108]
 gi|206732349|gb|EDZ49535.1| ATP-dependent protease hslV [Bacillus cereus AH1134]
 gi|218161766|gb|ACK61758.1| ATP-dependent protease hslV [Bacillus cereus B4264]
 gi|218540110|gb|ACK92508.1| ATP-dependent protease hslV [Bacillus cereus AH820]
 gi|225786526|gb|ACO26743.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus cereus
           03BB102]
 gi|227005202|gb|ACP14945.1| ATP-dependent protease hslV [Bacillus anthracis str. CDC 684]
 gi|228591550|gb|EEK49399.1| ATP-dependent protease hslV [Bacillus cereus ATCC 10876]
 gi|228597488|gb|EEK55138.1| ATP-dependent protease hslV [Bacillus cereus BGSC 6E1]
 gi|228603315|gb|EEK60792.1| ATP-dependent protease hslV [Bacillus cereus 172560W]
 gi|228620648|gb|EEK77517.1| ATP-dependent protease hslV [Bacillus cereus R309803]
 gi|228626133|gb|EEK82882.1| ATP-dependent protease hslV [Bacillus cereus ATCC 4342]
 gi|228631378|gb|EEK88012.1| ATP-dependent protease hslV [Bacillus cereus m1550]
 gi|228637034|gb|EEK93493.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST24]
 gi|228654343|gb|EEL10208.1| ATP-dependent protease hslV [Bacillus cereus BDRD-Cer4]
 gi|228660120|gb|EEL15756.1| ATP-dependent protease hslV [Bacillus cereus 95/8201]
 gi|228672077|gb|EEL27368.1| ATP-dependent protease hslV [Bacillus cereus Rock1-15]
 gi|228702129|gb|EEL54605.1| ATP-dependent protease hslV [Bacillus cereus Rock4-2]
 gi|228711782|gb|EEL63734.1| ATP-dependent protease hslV [Bacillus cereus F65185]
 gi|228723763|gb|EEL75118.1| ATP-dependent protease hslV [Bacillus cereus AH676]
 gi|228772751|gb|EEM21191.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228799562|gb|EEM46515.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228805672|gb|EEM52262.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228812069|gb|EEM58400.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228824509|gb|EEM70314.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830685|gb|EEM76290.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228837013|gb|EEM82354.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228843046|gb|EEM88128.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229268111|gb|ACQ49748.1| ATP-dependent protease HslVU, peptidase subunit [Bacillus anthracis
           str. A0248]
 gi|300377489|gb|ADK06393.1| ATP-dependent protease peptidase subunit [Bacillus cereus biovar
           anthracis str. CI]
          Length = 180

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 133/177 (75%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  V  +G   +AGDGQV++G   VMK  ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM+++ DKT  L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG+YALSA RAL    S   +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180


>gi|229019025|ref|ZP_04175866.1| ATP-dependent protease hslV [Bacillus cereus AH1273]
 gi|229025271|ref|ZP_04181691.1| ATP-dependent protease hslV [Bacillus cereus AH1272]
 gi|228736024|gb|EEL86599.1| ATP-dependent protease hslV [Bacillus cereus AH1272]
 gi|228742265|gb|EEL92424.1| ATP-dependent protease hslV [Bacillus cereus AH1273]
          Length = 180

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 101/177 (57%), Positives = 133/177 (75%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  V  +G   +AGDGQV++G   VMK  ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM+++ DKT  L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG+YALSA RAL    S   +A+EIA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKEIAKASLDIAGDICVYTNHNIIVEEL 180


>gi|302338072|ref|YP_003803278.1| 20S proteasome A and subunit betas [Spirochaeta smaragdinae DSM
           11293]
 gi|301635257|gb|ADK80684.1| 20S proteasome A and B subunits [Spirochaeta smaragdinae DSM 11293]
          Length = 183

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 100/180 (55%), Positives = 135/180 (75%), Gaps = 1/180 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +  ++ MHATTIL VR++G V +AGDGQV+LGQT+MK NARKVRR+  G ++ GFAG++A
Sbjct: 3   EEKSLTMHATTILAVRREGNVAMAGDGQVTLGQTLMKGNARKVRRIYDGKVLVGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL E  E KL+Q+   + RS+VELAK WR D+ LR LEAM+L+AD T TL+I+G GD
Sbjct: 63  DAFTLFEHFEGKLKQHGGDITRSAVELAKLWRTDRALRRLEAMLLVADHTKTLLISGTGD 122

Query: 127 VLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+EPEN  +AIGSGG++   +A   L ++  S +EIA +AM IA+ IC+YTN   +LE +
Sbjct: 123 VVEPENEAIAIGSGGNFAYAAALAYLDASDLSPKEIALRAMKIASGICIYTNDQFILEEI 182


>gi|332981425|ref|YP_004462866.1| ATP dependent peptidase CodWX, CodW component [Mahella
           australiensis 50-1 BON]
 gi|332699103|gb|AEE96044.1| ATP dependent peptidase CodWX, CodW component [Mahella
           australiensis 50-1 BON]
          Length = 176

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 98/174 (56%), Positives = 131/174 (75%), Gaps = 2/174 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +  TTI+ V+KDG   +AGDGQV++G  TVMK +A+KVRR+    ++ GFAGS ADAFTL
Sbjct: 2   LKGTTIVAVKKDGKTAVAGDGQVTMGENTVMKHHAKKVRRIYNNEVVIGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KL+Q+   LLR++VELA+DWR DK +R LEA+++ ADK   LVI+G G+V+EP+
Sbjct: 62  SERFEDKLQQHSGNLLRAAVELAQDWRSDKVMRKLEALMIAADKERMLVISGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           + V AIGSGG YAL+A RAL+ +T  SA +IA KA+ IA+ IC+YTN NI +E 
Sbjct: 122 DNVAAIGSGGPYALAAGRALVNNTDLSASDIAYKALEIASSICIYTNTNITVEE 175


>gi|218898983|ref|YP_002447394.1| ATP-dependent protease hslV [Bacillus cereus G9842]
 gi|228902333|ref|ZP_04066490.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 4222]
 gi|228909655|ref|ZP_04073478.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 200]
 gi|228940918|ref|ZP_04103477.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228966775|ref|ZP_04127819.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228973847|ref|ZP_04134423.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980437|ref|ZP_04140747.1| ATP-dependent protease hslV [Bacillus thuringiensis Bt407]
 gi|229098299|ref|ZP_04229246.1| ATP-dependent protease hslV [Bacillus cereus Rock3-29]
 gi|229104392|ref|ZP_04235061.1| ATP-dependent protease hslV [Bacillus cereus Rock3-28]
 gi|229117316|ref|ZP_04246694.1| ATP-dependent protease hslV [Bacillus cereus Rock1-3]
 gi|226704534|sp|B7IUI9|HSLV_BACC2 RecName: Full=ATP-dependent protease subunit HslV
 gi|218544388|gb|ACK96782.1| ATP-dependent protease hslV [Bacillus cereus G9842]
 gi|228666216|gb|EEL21680.1| ATP-dependent protease hslV [Bacillus cereus Rock1-3]
 gi|228679090|gb|EEL33298.1| ATP-dependent protease hslV [Bacillus cereus Rock3-28]
 gi|228685197|gb|EEL39128.1| ATP-dependent protease hslV [Bacillus cereus Rock3-29]
 gi|228779257|gb|EEM27514.1| ATP-dependent protease hslV [Bacillus thuringiensis Bt407]
 gi|228785872|gb|EEM33875.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228792874|gb|EEM40432.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228818754|gb|EEM64820.1| ATP-dependent protease hslV [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228849944|gb|EEM94775.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 200]
 gi|228857302|gb|EEN01805.1| ATP-dependent protease hslV [Bacillus thuringiensis IBL 4222]
 gi|326941599|gb|AEA17495.1| ATP-dependent protease peptidase subunit [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 180

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 101/177 (57%), Positives = 133/177 (75%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  V  +G   +AGDGQV++G   VMK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRRLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM+++ DKT  L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG+YALSA RAL    S   +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180


>gi|326315559|ref|YP_004233231.1| ATP-dependent protease HslVU, peptidase subunit [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323372395|gb|ADX44664.1| ATP-dependent protease HslVU, peptidase subunit [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 182

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 99/180 (55%), Positives = 137/180 (76%), Gaps = 6/180 (3%)

Query: 12  KMHATTILTVRKD--GV---VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           + H TTIL+VR+        V I GDGQV+LG  V+K +ARKVR+L  G ++AGFAG++A
Sbjct: 3   QFHGTTILSVRRQAADGTIQVAIGGDGQVTLGNIVVKGSARKVRKLHHGKVLAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ER E KL+++   L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GD
Sbjct: 63  DAFTLFERFEAKLDKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADASASLIITGNGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE G++AIGSGG+YA SAA+AL+  T+ SAE+I RK+++IA ++C+YTN +  +ETL
Sbjct: 123 VLEPEQGIVAIGSGGAYAHSAAKALLNHTELSAEDIVRKSLAIAGELCIYTNMHHTVETL 182


>gi|116515290|ref|YP_802919.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           Cc (Cinara cedri)]
 gi|122285314|sp|Q056X3|HSLV_BUCCC RecName: Full=ATP-dependent protease subunit HslV
 gi|116257144|gb|ABJ90826.1| peptidase component of ATP-dependent protease [Buchnera aphidicola
           str. Cc (Cinara cedri)]
          Length = 178

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 93/176 (52%), Positives = 125/176 (71%), Gaps = 3/176 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR  G VVI GDGQ + G TVMK+N +KVR + K  +IAGFAG +ADAFTL E  
Sbjct: 2   TTILSVRVQGKVVIGGDGQATFGHTVMKSNVKKVRSIYKNQVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE+Y  QL RS++ELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PEN ++
Sbjct: 62  EKKLEKYQGQLQRSAIELAKDWRTDRLLRKLEALLAVADKKNSLIITGTGDVIQPENDII 121

Query: 136 AIGSGGS---YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG     A  A   + +T   A  I +K++ IA++IC+YTN +  ++ +K  
Sbjct: 122 AIGSGGPYAQAAAYAYALVYNTNLKASNIVKKSLQIASNICIYTNQSFTIKEIKSE 177


>gi|92112733|ref|YP_572661.1| ATP-dependent protease peptidase subunit [Chromohalobacter
           salexigens DSM 3043]
 gi|91795823|gb|ABE57962.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Chromohalobacter salexigens DSM 3043]
          Length = 172

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 98/171 (57%), Positives = 132/171 (77%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   V +AGDGQVSLG TVMK NA KVRR+  G ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGENVALAGDGQVSLGNTVMKGNASKVRRIHHGKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +L++Y   L++++VEL+K+WR D+ LR LEAM+ +ADK  +L++TG GDV+EPE G++
Sbjct: 62  EAQLDKYQGHLVKAAVELSKEWRTDRALRRLEAMLAVADKNASLILTGNGDVVEPERGII 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA ++ARAL+ +T   A  I  K++ IA DICV+TNH+I LE L
Sbjct: 122 AIGSGGHYAQASARALLENTDLDARTITEKSLEIAGDICVFTNHHITLEEL 172


>gi|290985682|ref|XP_002675554.1| predicted protein [Naegleria gruberi]
 gi|284089151|gb|EFC42810.1| predicted protein [Naegleria gruberi]
          Length = 414

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 109/184 (59%), Positives = 136/184 (73%), Gaps = 7/184 (3%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            MH TT+L VRK G V I  DGQV+LG  VMK NARK+R++G   +IAGFAGS+ADA TL
Sbjct: 78  DMHGTTVLCVRKAGKVCIQADGQVTLGHVVMKGNARKLRQIGSD-VIAGFAGSTADAITL 136

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP- 130
            ERLE KLE+YP QL+R+ VE+AK WR DKYLR LEA++++ADK ITL++TG GDVLEP 
Sbjct: 137 FERLEAKLEEYPGQLMRACVEMAKLWRTDKYLRKLEAVMIVADKNITLILTGNGDVLEPN 196

Query: 131 ----ENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
                + V+ IGSGG YA+SAA+AL+      AE+IA+KAM IA +IC+YTN N    TL
Sbjct: 197 EGGANDSVVGIGSGGHYAISAAKALLDVNGFDAEQIAQKAMLIAGEICIYTNTNFTRLTL 256

Query: 186 KVGD 189
           +  D
Sbjct: 257 EEKD 260


>gi|332142913|ref|YP_004428651.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
           'Deep ecotype']
 gi|332143042|ref|YP_004428780.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327552935|gb|AEA99653.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327553064|gb|AEA99782.1| ATP-dependent protease subunit HslV [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 174

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 101/172 (58%), Positives = 135/172 (78%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VV+AGDGQVSLG TVMK NARKVRRL    I+AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGNQVVMAGDGQVSLGNTVMKGNARKVRRLYHDKILAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   L +++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PE  ++
Sbjct: 62  EAKLEAHQGHLTKAAVELAKDWRTDRALRKLEALLAVADETASFIITGNGDVVQPEQDLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG+YA +AA AL+ +T+ SA++IA KA++IA DICV+TNH+  ++ L 
Sbjct: 122 AIGSGGNYAQAAATALLDNTELSAKDIAEKALTIAGDICVFTNHSQTVDVLD 173


>gi|295399803|ref|ZP_06809784.1| 20S proteasome A and B subunits [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111685|ref|YP_003990001.1| 20S proteasome A and subunit betas [Geobacillus sp. Y4.1MC1]
 gi|294978206|gb|EFG53803.1| 20S proteasome A and B subunits [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216786|gb|ADP75390.1| 20S proteasome A and B subunits [Geobacillus sp. Y4.1MC1]
          Length = 180

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 98/178 (55%), Positives = 132/178 (74%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + HATTI  +  +G   +AGDGQV+ G   VMK  A+KVRRL +G ++AGFAGS ADAFT
Sbjct: 3   QFHATTIFAIHHNGKAAMAGDGQVTFGNAVVMKHTAKKVRRLFQGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KLE++   L R++VELAK+WR DK LR LEAM+++ D    L+I+G G+V+EP
Sbjct: 63  LFEMFEGKLEEFNGNLPRAAVELAKEWRSDKVLRRLEAMLIVMDARHLLLISGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YAL+A RAL      Q SA+EIA+ A+ IAA+ICVYTN +I++E L
Sbjct: 123 DDGMLAIGSGGNYALAAGRALKQYAGDQLSAKEIAKAALEIAANICVYTNGHIIVEEL 180


>gi|319764383|ref|YP_004128320.1| 20S proteasome a and b subunits [Alicycliphilus denitrificans BC]
 gi|330826602|ref|YP_004389905.1| ATP-dependent protease HslVU, peptidase subunit [Alicycliphilus
           denitrificans K601]
 gi|317118944|gb|ADV01433.1| 20S proteasome A and B subunits [Alicycliphilus denitrificans BC]
 gi|329311974|gb|AEB86389.1| ATP-dependent protease HslVU, peptidase subunit [Alicycliphilus
           denitrificans K601]
          Length = 181

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 97/179 (54%), Positives = 134/179 (74%), Gaps = 5/179 (2%)

Query: 12  KMHATTILTVRKDG----VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           + H TTIL+VR+       V + GDGQV+LG  V+K  ARKVR+L +G ++AGFAG++AD
Sbjct: 3   QYHGTTILSVRRKTAHGIQVALGGDGQVTLGNIVVKGTARKVRKLYQGRVLAGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ER E KLE++   L R+++EL KDWR D+ LR LEAM+ +AD + +L+ITG GDV
Sbjct: 63  AFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADHSASLIITGNGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARA-LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           LEPE G++AIGSGG+YA SAA+A L +T+  A EI +K++ IA ++C+YTN +  +ETL
Sbjct: 123 LEPEEGIVAIGSGGAYAHSAAKALLHNTELPAVEIVKKSLEIAGELCIYTNMHHTIETL 181


>gi|154686031|ref|YP_001421192.1| ATP-dependent protease peptidase subunit [Bacillus
           amyloliquefaciens FZB42]
 gi|166221623|sp|A7Z4N5|CLPQ_BACA2 RecName: Full=ATP-dependent protease subunit ClpQ
 gi|154351882|gb|ABS73961.1| ClpQ [Bacillus amyloliquefaciens FZB42]
          Length = 181

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 98/179 (54%), Positives = 132/179 (73%), Gaps = 4/179 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  V+ +G   ++GDGQV+ GQ  VMK  ARKVR+L  G ++AGFAGS ADAFT
Sbjct: 3   SFHATTIFAVQHNGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KLE+Y   L R+SVELAK+WR DK LR LEAM+++ ++   L+++G G+V+EP
Sbjct: 63  LFEMFEAKLEEYNGNLKRASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G++AIGSGG+YALSA RAL +      SA++IA+ A+ IA +ICVYTN  I+LE L+
Sbjct: 123 DDGILAIGSGGNYALSAGRALKTYAGENLSAKDIAKAALKIAGEICVYTNDQIILEELE 181


>gi|255039358|ref|YP_003089979.1| ATP-dependent protease peptidase subunit [Dyadobacter fermentans
           DSM 18053]
 gi|254952114|gb|ACT96814.1| 20S proteasome A and B subunits [Dyadobacter fermentans DSM 18053]
          Length = 180

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 135/175 (77%), Gaps = 2/175 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+HATT+L V  +G V +  DGQ ++G TV K+N +K+R L  G I+ GFAGS+ADAFTL
Sbjct: 3   KIHATTVLGVLHNGTVALGADGQATMGNTVAKSNVKKIRTLQGGKILVGFAGSTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E+KL  Y   + R+++ELAKDWR D+YLR LEAM++ A+K   LVI+G GDVLEPE
Sbjct: 63  LDRFEEKLNGYGGNMKRAAIELAKDWRTDRYLRKLEAMMITANKDEILVISGTGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           NG+ +IGSGG++ALSAA+AL    T  SAEE+ R+ ++IAAD+C+YTNHN+V+E 
Sbjct: 123 NGIASIGSGGNFALSAAQALKKHATHLSAEEMVREGLTIAADLCIYTNHNLVIEK 177


>gi|110637990|ref|YP_678197.1| ATP-dependent protease peptidase subunit [Cytophaga hutchinsonii
           ATCC 33406]
 gi|122966798|sp|Q11UQ9|HSLV_CYTH3 RecName: Full=ATP-dependent protease subunit HslV
 gi|110280671|gb|ABG58857.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Cytophaga hutchinsonii ATCC 33406]
          Length = 180

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 96/175 (54%), Positives = 133/175 (76%), Gaps = 2/175 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+HATT++ +R +G + I  DGQ +LG TV+K   +KVR+L +G ++ GFAGS+ADAFTL
Sbjct: 3   KIHATTVVAIRHNGQISIGADGQATLGNTVVKDYVKKVRKLMEGKVLCGFAGSTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LER E+KL  Y   + R+++ELAKDWR D+YLR LEAM+++ +K   L+I+G GDV+EP+
Sbjct: 63  LERFEEKLNTYAGNMKRAAIELAKDWRTDRYLRKLEAMMIVVNKDELLLISGTGDVIEPD 122

Query: 132 NGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           N +++IGSG  YA SAA AL    T  SA E+ R+++SIAADIC+YTNHN V+ET
Sbjct: 123 NDILSIGSGSMYAQSAAAALKKHATHLSAPEMVRESLSIAADICIYTNHNFVIET 177


>gi|304404238|ref|ZP_07385900.1| 20S proteasome A and B subunits [Paenibacillus curdlanolyticus YK9]
 gi|304347216|gb|EFM13048.1| 20S proteasome A and B subunits [Paenibacillus curdlanolyticus YK9]
          Length = 180

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 99/177 (55%), Positives = 133/177 (75%), Gaps = 3/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++ HATTI  VR +G   IAGDGQV+ G   VMK  A+KVRRL +G ++AGFAGS ADA 
Sbjct: 3   MQFHATTICAVRHNGQGAIAGDGQVTFGNSMVMKGTAKKVRRLYRGQVVAGFAGSVADAI 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KLE++   L RS+VELAK+WR D+ LR LEAM+L+ D    L+I+G G+++E
Sbjct: 63  TLFEKFEGKLEEHHGNLQRSAVELAKEWRSDRVLRKLEAMLLVMDAQGLLLISGNGEIIE 122

Query: 130 PENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           P++ V+AIGSGGS+ALSAARAL   +T   A+++A+ A+ IAADICV+TN NI++E 
Sbjct: 123 PDDDVLAIGSGGSFALSAARALKQHATHMEAKDMAKAALEIAADICVFTNRNIIVEE 179


>gi|218667651|ref|YP_002427121.1| heat shock protein HslV [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218519864|gb|ACK80450.1| heat shock protein HslV [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 173

 Score =  169 bits (427), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 103/174 (59%), Positives = 136/174 (78%), Gaps = 2/174 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MH TTIL VR+   VV+AGDGQV+ G TVMK NARKVRR+  G ++ GFAG++ADAFTLL
Sbjct: 1   MHGTTILCVRRGANVVMAGDGQVTFGNTVMKGNARKVRRIDPG-VLTGFAGATADAFTLL 59

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E KL+ +P QL +++VELAK+WR D+ LR LEAM+ +AD   +L+I+G GDVL+PE 
Sbjct: 60  ERFEAKLKAHPGQLAKAAVELAKEWRTDRVLRRLEAMLAVADDKQSLIISGQGDVLDPEY 119

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           G++AIGSGG YAL+AARAL+ ++   A E+A++A+ IA DIC+YTNH   +E L
Sbjct: 120 GIIAIGSGGPYALAAARALLENSDLPAREVAKRALGIAGDICIYTNHQHTIEEL 173


>gi|294500945|ref|YP_003564645.1| ATP-dependent protease HslV [Bacillus megaterium QM B1551]
 gi|295706291|ref|YP_003599366.1| ATP-dependent protease HslV [Bacillus megaterium DSM 319]
 gi|294350882|gb|ADE71211.1| ATP-dependent protease HslV [Bacillus megaterium QM B1551]
 gi|294803950|gb|ADF41016.1| ATP-dependent protease HslV [Bacillus megaterium DSM 319]
          Length = 180

 Score =  169 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 96/177 (54%), Positives = 131/177 (74%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  V+ +G   ++GDGQV+ G   VMK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAVQHNGQCAMSGDGQVTFGNAVVMKHTARKVRRLFQGQVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VELAK WR DK LR LEAM+++ +K   L+++G G+V+EP+
Sbjct: 64  FELFETKLEEYNGNLQRAAVELAKQWRSDKVLRKLEAMLIVMNKDNLLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG+YALSA RAL        +A+EIA+ A+ +A++ICVYTN +I++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQHAGEHLTAKEIAKAALDVASEICVYTNDHIIVEEL 180


>gi|157363638|ref|YP_001470405.1| ATP-dependent protease peptidase subunit [Thermotoga lettingae TMO]
 gi|189036247|sp|A8F5A7|HSLV_THELT RecName: Full=ATP-dependent protease subunit HslV
 gi|157314242|gb|ABV33341.1| 20S proteasome A and B subunits [Thermotoga lettingae TMO]
          Length = 176

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 84/176 (47%), Positives = 125/176 (71%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++  +TT+L V ++G  V+AGDGQV+ G TVMK  ARK+R++G G ++AGFAGS ADA  
Sbjct: 1   MEWKSTTVLVVSRNGKTVMAGDGQVTYGNTVMKHGARKIRKIGDGQVLAGFAGSVADAMA 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +R E KL+++   L +++VELAKDWR D+ LR LEA++L+AD+   L+I+G G+V++P
Sbjct: 61  LFDRFESKLKEWGGNLTKAAVELAKDWRTDRVLRRLEALLLVADRDNVLIISGTGEVVQP 120

Query: 131 ENGVMAIGSG-GSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ V AIGSG      +A   + +T   A EI  K+M IA++IC+YTN NI +E +
Sbjct: 121 DDNVAAIGSGAPYAIAAARALIRNTDLDAREIVEKSMQIASEICIYTNGNITIEEI 176


>gi|289548229|ref|YP_003473217.1| 20S proteasome A and subunit betas [Thermocrinis albus DSM 14484]
 gi|289181846|gb|ADC89090.1| 20S proteasome A and B subunits [Thermocrinis albus DSM 14484]
          Length = 172

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 88/171 (51%), Positives = 126/171 (73%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT+L VR++G  V+ GDGQV+LG +V+K  ARK+RRL   +++ GFAGS+AD   L+ERL
Sbjct: 2   TTVLVVRRNGRTVMGGDGQVTLGSSVVKHGARKIRRLYHDSVLVGFAGSAADGLALMERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE++   L+R+ VELAK+WR D+YLR LEA +L+AD+    +++G GD+LEP+  +M
Sbjct: 62  ESKLEEFRGSLVRACVELAKEWRTDRYLRRLEAFLLVADREHIFLLSGGGDLLEPDEPIM 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG  A ++A AL   T  SAEEI  +++ IA+ +C+YTN   V+E+L
Sbjct: 122 AIGSGGDVARASAMALYRHTSLSAEEIVLESLKIASQVCIYTNDRFVIESL 172


>gi|89093514|ref|ZP_01166462.1| ATP-dependent protease peptidase subunit [Oceanospirillum sp.
           MED92]
 gi|89082204|gb|EAR61428.1| ATP-dependent protease peptidase subunit [Oceanospirillum sp.
           MED92]
          Length = 176

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 94/173 (54%), Positives = 131/173 (75%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   VV+ GDGQVSLG TVMK  ARKVRRL K + I GFAGS+ADA TLL+  
Sbjct: 2   TTIVSVRRGDKVVVGGDGQVSLGNTVMKGTARKVRRLAKHDTITGFAGSTADAITLLDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   +  + V LAK+WR D+ LR LEA++L+A+K  T +I+G GD++EPE+GV+
Sbjct: 62  EAQLEKHQGNIFNAVVSLAKEWRGDRVLRKLEALMLVANKEKTYLISGSGDIIEPEDGVI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           AIGSGG++AL+AARAL  +T+  A++I  K++ IAA ICV++N N+ +E L  
Sbjct: 122 AIGSGGNFALAAARALTDNTELPAKDIVEKSLQIAAGICVFSNDNLTIEELDS 174


>gi|311030137|ref|ZP_07708227.1| ATP-dependent protease peptidase subunit [Bacillus sp. m3-13]
          Length = 180

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 96/178 (53%), Positives = 128/178 (71%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  V+  G   ++GDGQV+ G   VMK  ARKVR+L  G I+AGFAGS ADAFT
Sbjct: 3   SFHATTIFAVQHKGQCAMSGDGQVTFGNAVVMKHTARKVRKLFNGRILAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KLE+Y   + RS+VELAK+WR DK LR LEAM+++ D++  L+++G G+V+EP
Sbjct: 63  LFEMFEAKLEEYNGNIQRSAVELAKEWRSDKVLRKLEAMLIVMDESSMLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YALSA RAL        +A EIA+ ++  A +ICVYTN NI++E L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKRYAGEHMTAREIAKASLETAGEICVYTNDNIIVEEL 180


>gi|320354503|ref|YP_004195842.1| ATP dependent peptidase CodWX, CodW component [Desulfobulbus
           propionicus DSM 2032]
 gi|320123005|gb|ADW18551.1| ATP dependent peptidase CodWX, CodW component [Desulfobulbus
           propionicus DSM 2032]
          Length = 179

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 101/175 (57%), Positives = 131/175 (74%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TTIL VR  G VV+AGDGQV+LG TV+K  ARKVRRL    +I GFAGS+ADAFTL
Sbjct: 5   KIRSTTILAVRHQGRVVVAGDGQVTLGTTVIKHQARKVRRLYHDQVITGFAGSTADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            +RLE+KLEQY   L+R++VELAKDWRMDK LR LEAM++  D   +L+++G GDV+E +
Sbjct: 65  YDRLEQKLEQYNGNLMRAAVELAKDWRMDKMLRRLEAMLIAVDAKHSLLLSGTGDVIEAD 124

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG Y   +A   +  +   AE IAR A+ IA  ICVYTN NIV+E++
Sbjct: 125 DGILAIGSGGPYAQAAAKALVAHSSLDAEAIARTALEIAGSICVYTNTNIVVESI 179


>gi|42782922|ref|NP_980169.1| ATP-dependent protease peptidase subunit [Bacillus cereus ATCC
           10987]
 gi|47570331|ref|ZP_00240976.1| heat shock protein HslV [Bacillus cereus G9241]
 gi|206978535|ref|ZP_03239385.1| ATP-dependent protease hslV [Bacillus cereus H3081.97]
 gi|217961250|ref|YP_002339818.1| ATP-dependent protease peptidase subunit [Bacillus cereus AH187]
 gi|229031460|ref|ZP_04187460.1| ATP-dependent protease hslV [Bacillus cereus AH1271]
 gi|229140472|ref|ZP_04269027.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST26]
 gi|229174496|ref|ZP_04302028.1| ATP-dependent protease hslV [Bacillus cereus MM3]
 gi|229197940|ref|ZP_04324655.1| ATP-dependent protease hslV [Bacillus cereus m1293]
 gi|47605595|sp|P61476|HSLV_BACC1 RecName: Full=ATP-dependent protease subunit HslV
 gi|226704536|sp|B7HLG3|HSLV_BACC7 RecName: Full=ATP-dependent protease subunit HslV
 gi|42738849|gb|AAS42777.1| ATP-dependent protease hslV [Bacillus cereus ATCC 10987]
 gi|47552996|gb|EAL11402.1| heat shock protein HslV [Bacillus cereus G9241]
 gi|206743258|gb|EDZ54715.1| ATP-dependent protease hslV [Bacillus cereus H3081.97]
 gi|217063650|gb|ACJ77900.1| ATP-dependent protease hslV [Bacillus cereus AH187]
 gi|228585519|gb|EEK43622.1| ATP-dependent protease hslV [Bacillus cereus m1293]
 gi|228609056|gb|EEK66346.1| ATP-dependent protease hslV [Bacillus cereus MM3]
 gi|228643033|gb|EEK99309.1| ATP-dependent protease hslV [Bacillus cereus BDRD-ST26]
 gi|228729749|gb|EEL80729.1| ATP-dependent protease hslV [Bacillus cereus AH1271]
 gi|324327727|gb|ADY22987.1| ATP-dependent protease subunit HslV [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 180

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 133/177 (75%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  V  +G   +AGDGQV++G   VMK  ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM+++ DKT  L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG+YALSA RAL    S   +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLDIAGDICVYTNHNIIVEEL 180


>gi|156935934|ref|YP_001439850.1| ATP-dependent protease peptidase subunit [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156534188|gb|ABU79014.1| hypothetical protein ESA_03828 [Cronobacter sakazakii ATCC BAA-894]
          Length = 170

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 93/169 (55%), Positives = 127/169 (75%), Gaps = 1/169 (0%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +R++G VVI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE
Sbjct: 1   MRRNGQVVIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLE 60

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
            +   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++AIGSG
Sbjct: 61  MHQGHLVKAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLIAIGSG 120

Query: 141 GSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           G YA +AARAL+ +T+  A +I  K++ IA DIC+YTNH + +E L   
Sbjct: 121 GPYAQAAARALLENTELGARDIVEKSLGIAGDICIYTNHFLTIEELNSK 169


>gi|327441061|dbj|BAK17426.1| ATP-dependent protease HslVU, peptidase subunit [Solibacillus
           silvestris StLB046]
          Length = 180

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 103/178 (57%), Positives = 132/178 (74%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++HATTI  +  +G   +AGDGQV+LG   VMK  ARKVRRL  G ++AGFAGS ADAFT
Sbjct: 3   QIHATTIFAIHHNGECAMAGDGQVTLGNAVVMKHTARKVRRLFNGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KL +Y   L R+SVE+AK WR DK LR LEAM+L+ DK+  L+++G G+V+EP
Sbjct: 63  LFEMFEAKLNEYNGNLQRASVEVAKQWRGDKMLRQLEAMLLVMDKSTLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YALSA RAL        SA+EIA  A++ AADICV+TNHNI+LE L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKHAGDHLSAKEIAEAALTTAADICVFTNHNIILEVL 180


>gi|213584972|ref|ZP_03366798.1| ATP-dependent protease peptidase subunit [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 169

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 98/168 (58%), Positives = 128/168 (76%), Gaps = 1/168 (0%)

Query: 22  RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
           R++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE 
Sbjct: 1   RRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEM 60

Query: 82  YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
           +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG
Sbjct: 61  HQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGG 120

Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            YA +AARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L   
Sbjct: 121 PYAQAAARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEELTAK 168


>gi|303327044|ref|ZP_07357486.1| ATP-dependent protease HslV [Desulfovibrio sp. 3_1_syn3]
 gi|302863032|gb|EFL85964.1| ATP-dependent protease HslV [Desulfovibrio sp. 3_1_syn3]
          Length = 177

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 98/177 (55%), Positives = 131/177 (74%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  HATTIL V+K G V +AGDGQV+LGQT +MK  A+KVRRL +G I+AGFAG++ADAF
Sbjct: 1   MDTHATTILAVKKGGHVAMAGDGQVTLGQTMIMKHTAQKVRRLYEGRILAGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E  E KL++    LLR++VE+ K+WR DKYLR LEAM+L+AD    LV++G GDV+E
Sbjct: 61  TLFELFETKLKEVHGNLLRAAVEMTKEWRKDKYLRKLEAMLLLADNEHLLVVSGTGDVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++ V AIGSGG Y   +A      +   AE +AR++M IA++ICVYTN ++ +ETL
Sbjct: 121 PDDDVAAIGSGGPYALAAARALTRHSDLDAESVARESMRIASEICVYTNGHLTVETL 177


>gi|319649573|ref|ZP_08003729.1| ATP-dependent protease peptidase subunit [Bacillus sp. 2_A_57_CT2]
 gi|317398735|gb|EFV79417.1| ATP-dependent protease peptidase subunit [Bacillus sp. 2_A_57_CT2]
          Length = 180

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 96/178 (53%), Positives = 130/178 (73%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + HATTI  V  +G   ++GDGQV+ G   VMK  ARKVR+L  G ++AGFAGS ADAFT
Sbjct: 3   EFHATTIFAVHHNGECAMSGDGQVTFGNAVVMKHTARKVRKLFNGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KLE+Y   L R++VELAK+WR DK LR LEAM+++ +    L+I+G G+V+EP
Sbjct: 63  LFEMFEGKLEEYNGNLERAAVELAKEWRSDKVLRKLEAMLIVMNTDSLLLISGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YAL+A R+L        SA EIA+ ++ +AA+ICVYTNHNI++E L
Sbjct: 123 DDGILAIGSGGNYALAAGRSLKRFAGEHLSAREIAKASLEMAAEICVYTNHNIIVEEL 180


>gi|312898771|ref|ZP_07758160.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
           micronuciformis F0359]
 gi|310620202|gb|EFQ03773.1| ATP-dependent protease HslVU, peptidase subunit [Megasphaera
           micronuciformis F0359]
          Length = 179

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 135/175 (77%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI+ V KDG   IAGDGQV++G + +MK  A+KVRRL  G +++GFAGS ADAF+L
Sbjct: 5   FHATTIVAVSKDGKTAIAGDGQVTMGNSVIMKGTAQKVRRLYNGKVVSGFAGSVADAFSL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            +R E KL +Y   L+RS+VELAKDWR DK L  LEA++L++D    L+++G G+V+EP+
Sbjct: 65  FDRFEAKLNEYNGNLIRSAVELAKDWRSDKVLHKLEALLLVSDGERILMLSGTGEVIEPD 124

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG YAL+AARAL  +T  +A+EIA K++ IAADICVYTNHN++ E +
Sbjct: 125 DGISAIGSGGMYALAAARALKDNTDLTAKEIAEKSLHIAADICVYTNHNVICEEI 179


>gi|328675858|gb|AEB28533.1| ATP-dependent protease HslV [Francisella cf. novicida 3523]
          Length = 183

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TTIL VRK   VVI GDGQ +LG TV K N  KVR+L  G ++ GFAGS+ADAFTL 
Sbjct: 4   IKGTTILCVRKGDKVVIGGDGQATLGHTVAKDNIVKVRKLNNGKVLTGFAGSTADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL-EPE 131
           E+ E+KLE Y   L R++VE+ ++WR+D+ L  LEAMI++AD+ ++L+I+G GDV+   +
Sbjct: 64  EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIVVADEKLSLLISGAGDVMAADK 123

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           N +++IGSG +YA SAA AL+ +T  SAEEI RK+++IAAD C+YTNHN  +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALIENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179


>gi|115314759|ref|YP_763482.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. holarctica OSU18]
 gi|156502383|ref|YP_001428448.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|115129658|gb|ABI82845.1| T01 family HslV component of HslUV peptidase (ClpQ) [Francisella
           tularensis subsp. holarctica OSU18]
 gi|156252986|gb|ABU61492.1| peptidase, T1 family [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 190

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 96/186 (51%), Positives = 137/186 (73%), Gaps = 3/186 (1%)

Query: 4   MGDKHYAVK-MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           M +K   ++ +  TTIL VRK   VVI GDGQ +LG T+ K N  KVR+L  G ++ GFA
Sbjct: 1   MPNKGIIMEAIKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           GS+ADAFTL E+ E+KLE Y   L R++VE+ ++WR+D+ L  LEAMI++AD+ ++L+I+
Sbjct: 61  GSTADAFTLFEKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLIS 120

Query: 123 GMGDVL-EPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNI 180
           G GDV+   +N +++IGSG +YA SAA AL+ +T  SAEEI RK+++IAAD C+YTNHN 
Sbjct: 121 GAGDVMAADKNDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNF 180

Query: 181 VLETLK 186
            +E+L+
Sbjct: 181 TIESLE 186


>gi|312797559|ref|YP_004030481.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
           [Burkholderia rhizoxinica HKI 454]
 gi|312169334|emb|CBW76337.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV (EC
           3.4.25.-) [Burkholderia rhizoxinica HKI 454]
          Length = 178

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  A+KVRR+  G ++ GFAG +ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNSVALGGDGQVTLGNIVMKGGAKKVRRIYGGKVLVGFAGGTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE++   L R++VELAKDWR D+ LR LEAM++ AD   TLVITG GDVL+PE
Sbjct: 63  LDRFEGKLEKHQGNLTRAAVELAKDWRTDRMLRRLEAMLIAADAETTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA +AARAL  +T+ SA +I  KA++IA D+C+YTNH+ V+ET++
Sbjct: 123 GGLCAIGSGGAYAQAAARALADNTELSARDIVEKALAIAGDMCIYTNHSRVIETIE 178


>gi|312879577|ref|ZP_07739377.1| 20S proteasome A and B subunits [Aminomonas paucivorans DSM 12260]
 gi|310782868|gb|EFQ23266.1| 20S proteasome A and B subunits [Aminomonas paucivorans DSM 12260]
          Length = 177

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 102/174 (58%), Positives = 132/174 (75%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL VRKDG V +AGDGQV+LG  ++KA ARKVRRL +G I+AGFAGS+ADA TLL
Sbjct: 2   FKGTTILCVRKDGRVAMAGDGQVTLGSQIVKAGARKVRRLHEGQILAGFAGSTADAMTLL 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER EK+LE+    LLRS+  L K+WR DK LR LEAM+L+AD+  TL+++G GD+LEPE 
Sbjct: 62  ERFEKRLEENQGHLLRSAAALVKEWRTDKALRRLEAMLLVADREQTLLLSGAGDILEPEG 121

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           GV +IGSG  YAL+AAR L+  +  +A  IAR+++ +A++IC+YTN  I LE L
Sbjct: 122 GVASIGSGSGYALAAARGLLEGSDWAAGAIARRSLELASEICIYTNDQITLEEL 175


>gi|285019334|ref|YP_003377045.1| peptidase component of the hsluv protease [Xanthomonas albilineans
           GPE PC73]
 gi|283474552|emb|CBA17053.1| probable peptidase component of the hsluv protease protein
           [Xanthomonas albilineans]
          Length = 183

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 111/184 (60%), Positives = 141/184 (76%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M         HATTIL+VR+DG V +AGDGQV+LG TVMK NARKVRRLG  G ++AGFA
Sbjct: 1   MDPSQNPHVFHATTILSVRRDGRVAVAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KLE+Y  QL R++VELAKDWR ++ L  LEA++ +AD+  +L+I 
Sbjct: 61  GAAADAFTLFELFEAKLEKY-GQLTRAAVELAKDWRTERRLGKLEALLAVADQETSLIIG 119

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSYALSAARAL+  T   A  IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLGHTSLDARTIAVEALNIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|295696107|ref|YP_003589345.1| 20S proteasome A and B subunits [Bacillus tusciae DSM 2912]
 gi|295411709|gb|ADG06201.1| 20S proteasome A and B subunits [Bacillus tusciae DSM 2912]
          Length = 180

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 90/178 (50%), Positives = 127/178 (71%), Gaps = 3/178 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++H TTI  +   G  V+AGDGQV++G  TVMK  A+KVRRL +G ++AGFAGS ADA  
Sbjct: 3   QLHGTTIFAILDRGHAVMAGDGQVTMGNATVMKHGAKKVRRLYQGRVLAGFAGSVADALA 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L ER E  LE +   L R++V++AK+WR D+ LR LEAM+++ D+   L+++G G+V+EP
Sbjct: 63  LFERFEASLESHSGNLPRAAVDVAKEWRTDRVLRRLEAMLVVCDREHLLLLSGSGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G++A+GSGG YAL+A RAL       S  EIA +AM IA++ICVYTN   V+E L+
Sbjct: 123 DDGILAVGSGGVYALAAGRALKRHAAGLSPREIALEAMRIASEICVYTNDRFVVEELE 180


>gi|218778263|ref|YP_002429581.1| ATP-dependent protease peptidase subunit [Desulfatibacillum
           alkenivorans AK-01]
 gi|218759647|gb|ACL02113.1| 20S proteasome A and B subunits [Desulfatibacillum alkenivorans
           AK-01]
          Length = 180

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 86/180 (47%), Positives = 118/180 (65%), Gaps = 1/180 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               +    TTIL VRKDG   IAGDGQV+LG TV+K  A+KVR++    I+ GFAG++A
Sbjct: 1   MSNPLDFRGTTILAVRKDGKTAIAGDGQVTLGNTVVKHTAQKVRKIYHDKIVVGFAGATA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DA  L ++ E KLEQY   L R++VELA+DWR DKYLR LEAM++  D     +I+G GD
Sbjct: 61  DALNLFDKFEGKLEQYNGNLTRAAVELARDWRTDKYLRKLEAMMIAVDDQRMFLISGNGD 120

Query: 127 VLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++EP+ GV+ IGSGG++   +A   +  +   A  IA+ AM +AA IC+YTN  + L  +
Sbjct: 121 IIEPDEGVIGIGSGGAFAQAAATGLIRHSDLDASAIAKAAMDVAASICIYTNQVVTLHEI 180


>gi|110597420|ref|ZP_01385707.1| 20S proteasome, A and B subunits [Chlorobium ferrooxidans DSM
           13031]
 gi|110340964|gb|EAT59435.1| 20S proteasome, A and B subunits [Chlorobium ferrooxidans DSM
           13031]
          Length = 182

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 95/182 (52%), Positives = 135/182 (74%), Gaps = 2/182 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +    + + +TT++ V +DG   +  DGQ++LG TV+K + RK+RRL +G +IAGFAG
Sbjct: 1   MKNNEKPI-IRSTTVIGVLRDGKAALGSDGQMTLGNTVIKHSTRKIRRLYQGKLIAGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TLL+R E+KLE Y  +L R++VELAK+WR DKYLR LEAM+ I      L+I+G
Sbjct: 60  ATADAVTLLDRFEEKLEAYNGKLDRAAVELAKEWRTDKYLRRLEAMLAIVSSDKALIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+EPE+G++AIGSG  YALSAARALM     SA +I ++++ IA+DIC+YTN +I++
Sbjct: 120 TGDVIEPEDGIVAIGSGSMYALSAARALMKHSSLSARDIVQESLKIASDICIYTNDHIIV 179

Query: 183 ET 184
           E 
Sbjct: 180 EE 181


>gi|83816553|ref|YP_445762.1| ATP-dependent protease peptidase subunit [Salinibacter ruber DSM
           13855]
 gi|83757947|gb|ABC46060.1| heat shock protein [Salinibacter ruber DSM 13855]
          Length = 213

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 91/179 (50%), Positives = 131/179 (73%), Gaps = 2/179 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATT+L VR +G + +  DGQ ++ +TV+K  A KVR L  G+I+AGFAGS+ADAFTL E
Sbjct: 35  HATTVLGVRHNGQIALGSDGQATMNETVVKHKAEKVRSLYDGDILAGFAGSTADAFTLFE 94

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R E+KL++Y   + R++VELAK+WR DKYLR LEA++ +A     L+I+G GDV+EP++ 
Sbjct: 95  RFEEKLQEYGGNVARAAVELAKEWRTDKYLRRLEALLAVASPGELLLISGAGDVIEPDDD 154

Query: 134 VMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           ++AIGSGGS+AL+A+RAL+      +A +I    +SIAADIC+YTNHN  +  ++   +
Sbjct: 155 IIAIGSGGSFALAASRALLQNAQGLTARDIVENGLSIAADICIYTNHNRTIRDIEAESD 213


>gi|330951293|gb|EGH51553.1| ATP-dependent protease subunit HslV [Pseudomonas syringae Cit 7]
          Length = 176

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 100/170 (58%), Positives = 130/170 (76%), Gaps = 1/170 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG+ ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGAPADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           A+GSGG     +A   L+ T  SA EIA  ++ IA DICV+TNHNI +E 
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 171


>gi|28872253|ref|NP_794872.1| heat shock protein HslV [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|301382645|ref|ZP_07231063.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060629|ref|ZP_07252170.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           tomato K40]
 gi|302132700|ref|ZP_07258690.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|38257952|sp|Q87V01|HSLV_PSESM RecName: Full=ATP-dependent protease subunit HslV
 gi|28855507|gb|AAO58567.1| heat shock protein HslV [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|330877950|gb|EGH12099.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964751|gb|EGH65011.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331016039|gb|EGH96095.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 176

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 101/175 (57%), Positives = 133/175 (76%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG     +A   L+ T  SA EIA  ++ IA DICV+TNHNI +E   + D
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEEQDLAD 176


>gi|220904717|ref|YP_002480029.1| ATP-dependent protease peptidase subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|254802409|sp|B8J0S4|HSLV_DESDA RecName: Full=ATP-dependent protease subunit HslV
 gi|219869016|gb|ACL49351.1| 20S proteasome A and B subunits [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 177

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 101/177 (57%), Positives = 134/177 (75%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++ HATTIL VRKDG+V +AGDGQV++GQT +MK  A+KVRRL  G I+AGFAG++ADAF
Sbjct: 1   METHATTILAVRKDGIVALAGDGQVTMGQTMIMKHAAQKVRRLHDGKILAGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E  E KL++    ++R++VE+ KDWR DKYLR LEAM+L+AD+   LV++G GDV+E
Sbjct: 61  TLFELFESKLKEVRGHMVRAAVEMTKDWRKDKYLRKLEAMLLLADREHILVLSGTGDVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++ V AIGSGG Y   +A      +   AE IAR++M IAA+ICVYTN ++ LETL
Sbjct: 121 PDDNVAAIGSGGPYALAAARALSRHSGLDAETIARESMRIAAEICVYTNDHVTLETL 177


>gi|269836346|ref|YP_003318574.1| 20S proteasome A and B subunits [Sphaerobacter thermophilus DSM
           20745]
 gi|269785609|gb|ACZ37752.1| 20S proteasome A and B subunits [Sphaerobacter thermophilus DSM
           20745]
          Length = 190

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 98/185 (52%), Positives = 132/185 (71%), Gaps = 1/185 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           ++ + + HATTIL V++DG V +AGDGQV+ G  VMK  ARK+R L  G ++AGFAG+ A
Sbjct: 2   QNQSTRWHATTILGVQRDGDVALAGDGQVTYGDVVMKHGARKIRTLLDGQVVAGFAGAVA 61

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DA TL E+ E  L  +   L R++VELAK+WR D+YLR LEA +++AD    LVI+G GD
Sbjct: 62  DALTLFEKFETHLRDWDGNLRRAAVELAKEWRTDRYLRRLEAQLIVADGDSLLVISGEGD 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+EP++GV AIG+G  YA +AARAL+  T   A EIA  AM + AD+C+YTN +IV+ET 
Sbjct: 122 VIEPDDGVAAIGTGAPYATAAARALLQHTDMPAREIAEAAMRVTADLCIYTNDHIVIETT 181

Query: 186 KVGDE 190
           +  DE
Sbjct: 182 RRQDE 186


>gi|21674018|ref|NP_662083.1| ATP-dependent protease peptidase subunit [Chlorobium tepidum TLS]
 gi|25008570|sp|Q8KD62|HSLV_CHLTE RecName: Full=ATP-dependent protease subunit HslV
 gi|21647166|gb|AAM72425.1| heat shock protein HslV [Chlorobium tepidum TLS]
          Length = 181

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 98/179 (54%), Positives = 134/179 (74%), Gaps = 1/179 (0%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           +   ++ +TT++ + +DG   +  DGQ++LG TVMK + RK+R L +G  I GFAG++AD
Sbjct: 3   YEKPQIRSTTVIGIIRDGKAALGSDGQMTLGNTVMKHSTRKIRSLYQGRFITGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           A TLL+R E KLE Y  +L R++VELAKDWR DKYLR LEAM+ +      L+I+G GDV
Sbjct: 63  ALTLLDRFESKLEAYSGKLDRAAVELAKDWRTDKYLRRLEAMLAVVSTDKALIISGTGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +EPE+G++AIGSG  YAL+AAR+LM  T  SAEEI R+++ IAADIC+YTN +IV+ETL
Sbjct: 123 IEPEDGIVAIGSGSMYALAAARSLMKHTTLSAEEIVRESLQIAADICIYTNDHIVIETL 181


>gi|302389651|ref|YP_003825472.1| ATP dependent peptidase CodWX, CodW component [Thermosediminibacter
           oceani DSM 16646]
 gi|302200279|gb|ADL07849.1| ATP dependent peptidase CodWX, CodW component [Thermosediminibacter
           oceani DSM 16646]
          Length = 176

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 93/175 (53%), Positives = 127/175 (72%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             ATTI+ V       IAGDGQV+ G  T+MK +A+K+R++  G ++AGFAGS ADA TL
Sbjct: 2   FSATTIVAVVNKKGAAIAGDGQVTFGENTIMKHHAKKIRKIYNGRVLAGFAGSVADAVTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE++   L+R++VELAK+WR D+ LR LEA+++ AD+   L+I+G G+V+EP+
Sbjct: 62  FEKFEGKLEEFHGNLVRAAVELAKEWRTDRMLRKLEALLIAADREHILIISGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGG YAL+AARAL   T   AE+I  +A+ IAADICVYTN  I +E L
Sbjct: 122 DGIAAIGSGGPYALAAARALARFTDLPAEKIVEEALKIAADICVYTNDFISVEAL 176


>gi|71733580|ref|YP_272685.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482923|ref|ZP_05636964.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289624153|ref|ZP_06457107.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289647386|ref|ZP_06478729.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298485094|ref|ZP_07003190.1| ATP-dependent protease hslV [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|123638631|sp|Q48PI4|HSLV_PSE14 RecName: Full=ATP-dependent protease subunit HslV
 gi|71554133|gb|AAZ33344.1| heat shock protein HslV [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|298160346|gb|EFI01371.1| ATP-dependent protease hslV [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330865706|gb|EGH00415.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330945992|gb|EGH47301.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330984742|gb|EGH82845.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009575|gb|EGH89631.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 176

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 100/170 (58%), Positives = 131/170 (77%), Gaps = 1/170 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           A+GSGG     +A   L+ T  SA EIA  ++ IA DICV+TNHNI +E 
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 171


>gi|323700574|ref|ZP_08112486.1| 20S proteasome, A and B subunits [Desulfovibrio sp. ND132]
 gi|323460506|gb|EGB16371.1| 20S proteasome, A and B subunits [Desulfovibrio desulfuricans
           ND132]
          Length = 179

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 104/176 (59%), Positives = 129/176 (73%), Gaps = 2/176 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++  TTI+ V+ +    +AGDGQV+LGQ V MK  ARKVRR+ K  +  GFAG++ADAF
Sbjct: 1   MELRGTTIVAVKDENGTAVAGDGQVTLGQAVAMKHTARKVRRIYKDRVSIGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER E KLE Y   LLR++VELAKDWR DKYLR LEAM+L AD    L+I+G GDV+E
Sbjct: 61  TLSERFESKLETYAGNLLRAAVELAKDWRTDKYLRKLEAMLLAADGEHILIISGTGDVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           P++GV AIGSGGSY   +A     +T   AE IARKAM IAADICVYTN++I +ET
Sbjct: 121 PDDGVAAIGSGGSYALAAARALQQNTDLPAETIARKAMEIAADICVYTNNHITIET 176


>gi|59712884|ref|YP_205660.1| ATP-dependent protease peptidase subunit [Vibrio fischeri ES114]
 gi|59480985|gb|AAW86772.1| peptidase component of the HslUV protease [Vibrio fischeri ES114]
          Length = 193

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 91/173 (52%), Positives = 127/173 (73%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+AGDGQ S G  + K N +KVRRL   +++ GFAGS+ADAF L +  
Sbjct: 21  TTIVSVRREGKVVVAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLC 80

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAK+WR D+ LR LEAM+++ADKT +L+I+G GD++  +N ++
Sbjct: 81  ERKLEMHQGNLTKAAVELAKEWRSDRALRRLEAMLIVADKTTSLIISGTGDLINADNDLL 140

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            IGSGG +A SAA AL+ +T   A EIA KA++IA DI VYTNHN  +E L  
Sbjct: 141 TIGSGGYFARSAATALLENTDLDAREIATKALTIAGDIDVYTNHNHTVEELNA 193


>gi|23099004|ref|NP_692470.1| ATP-dependent protease peptidase subunit [Oceanobacillus iheyensis
           HTE831]
 gi|47605697|sp|Q8CXH2|HSLV_OCEIH RecName: Full=ATP-dependent protease subunit HslV
 gi|22777232|dbj|BAC13505.1| ATP-dependent protease (heat shock protein HslV) [Oceanobacillus
           iheyensis HTE831]
          Length = 181

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 94/179 (52%), Positives = 130/179 (72%), Gaps = 3/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++MHATTI  V+  G   + GDGQV+LG +V MK  A+KVR L  G ++AGFAGS ADAF
Sbjct: 3   MEMHATTIFAVQHQGQSAMCGDGQVTLGNSVVMKHKAKKVRTLYNGKVLAGFAGSVADAF 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KL+ +   L R+SVELA++WR DK LR LEAM+++ +K    +++G G+V+E
Sbjct: 63  TLFEKFETKLQSFNGNLTRASVELAQEWRSDKVLRKLEAMLIVMNKEHMYLVSGTGEVIE 122

Query: 130 PENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           P++G++AIGSGG+YALSA RAL   +   SA +IAR A+ +A +ICV+TN  I LE L+
Sbjct: 123 PDDGILAIGSGGNYALSAGRALVRYADNMSAADIARSALEVAGEICVFTNDQITLEVLE 181


>gi|255994160|ref|ZP_05427295.1| ATP-dependent protease HslVU, peptidase subunit [Eubacterium
           saphenum ATCC 49989]
 gi|255993828|gb|EEU03917.1| ATP-dependent protease HslVU, peptidase subunit [Eubacterium
           saphenum ATCC 49989]
          Length = 184

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 88/184 (47%), Positives = 130/184 (70%), Gaps = 2/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFA 62
           M  +   ++   TTI  VR++G V I GDGQV++GQ ++MK NA KVR++ K  +++GFA
Sbjct: 1   MNRRGDTMEFRGTTICAVRRNGKVCIGGDGQVTMGQHSIMKNNAVKVRKIYKDTVLSGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           GS ADAF+L E+ E KLE+    L +++V LA+ WR DK LR L+A++L+ADK   L+I+
Sbjct: 61  GSVADAFSLTEKFENKLEENSGNLKKAAVALAQLWRSDKALRTLDALMLVADKDDILLIS 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
           G G+V+EP+    AIGSGG+YA +AA AL  +T+  A++I +K++ IA +ICVYTN +I 
Sbjct: 121 GNGEVIEPDEDYTAIGSGGNYAYAAATALYNNTELEAKDIVKKSLEIAGNICVYTNEHIT 180

Query: 182 LETL 185
           +  L
Sbjct: 181 VIEL 184


>gi|254759318|ref|ZP_05211343.1| ATP-dependent protease peptidase subunit [Bacillus anthracis str.
           Australia 94]
          Length = 180

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 97/177 (54%), Positives = 131/177 (74%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  V  +G   +AGDGQV++G   VMK  ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM+++ DKT  L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALS---AARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG+YALS   A +   S   +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGNYALSAGCALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 180


>gi|138894734|ref|YP_001125187.1| ATP-dependent protease peptidase subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247645|ref|ZP_03146347.1| 20S proteasome A and B subunits [Geobacillus sp. G11MC16]
 gi|166222977|sp|A4IM88|HSLV_GEOTN RecName: Full=ATP-dependent protease subunit HslV
 gi|134266247|gb|ABO66442.1| ATP-dependent protease HslV [Geobacillus thermodenitrificans
           NG80-2]
 gi|196212429|gb|EDY07186.1| 20S proteasome A and B subunits [Geobacillus sp. G11MC16]
          Length = 180

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 97/177 (54%), Positives = 129/177 (72%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  +R +G   +AGDGQV+ G   VMK  A+KVRRL  G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAIRHNGAAAMAGDGQVTFGNAVVMKHTAKKVRRLFHGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLEQ+   L R++VELAK+WR +K LR LEAM+++ D    L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEQFNGNLPRAAVELAKEWRSNKVLRRLEAMLIVMDGQHLLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG YAL+A RAL        +A+EIA+ A+ IAADICVYTN +I++E L
Sbjct: 124 DGMLAIGSGGHYALAAGRALKQYAGASMTAKEIAKAALEIAADICVYTNGHIIVEEL 180


>gi|157803952|ref|YP_001492501.1| ATP-dependent protease peptidase subunit [Rickettsia canadensis
           str. McKiel]
 gi|166222995|sp|A8EZD3|HSLV_RICCK RecName: Full=ATP-dependent protease subunit HslV
 gi|157785215|gb|ABV73716.1| hypothetical protein A1E_03945 [Rickettsia canadensis str. McKiel]
          Length = 182

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 103/180 (57%), Positives = 138/180 (76%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL ++K+  ++IA DGQVS G T++K++ARK+R +    IIAGFAGS+A
Sbjct: 1   MSDNLALHGTTILCLKKNEDIIIAADGQVSHGNTILKSSARKLRTIANNKIIAGFAGSTA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L E+LE K+E+Y   LLRS+VELAKDWR DKYLR LEAM+++AD++  L++TG GD
Sbjct: 61  DGLALFEKLEAKIEKYSYNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPEN V AIGSGG +ALSAARALM      +AEEIA K+M+IAAD+CV++N NI++E 
Sbjct: 121 VVEPENNVAAIGSGGLFALSAARALMSCENNLTAEEIALKSMNIAADLCVFSNRNIIMEK 180


>gi|56417065|ref|YP_154139.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
           St. Maries]
 gi|254995240|ref|ZP_05277430.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
           Mississippi]
 gi|255003418|ref|ZP_05278382.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
           Puerto Rico]
 gi|255004538|ref|ZP_05279339.1| ATP-dependent protease peptidase subunit [Anaplasma marginale str.
           Virginia]
 gi|81599106|sp|Q5P9Z6|HSLV_ANAMM RecName: Full=ATP-dependent protease subunit HslV
 gi|56388297|gb|AAV86884.1| heat shock protein [Anaplasma marginale str. St. Maries]
          Length = 189

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 108/189 (57%), Positives = 150/189 (79%), Gaps = 7/189 (3%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  +  +  M+ TTIL +R+ G V+IAGDGQVS+G  +MK +A+K++RL   ++I GFAG
Sbjct: 1   MSHR-DSYTMYGTTILCIRQGGSVIIAGDGQVSMGSAIMKTSAKKIKRLAGDSVITGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++L+I+G
Sbjct: 60  ATADAFTLFERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARAL------MSTQNSAEEIARKAMSIAADICVYTN 177
            GDVLEPENG+ AIGSGG++ALSAARAL      +S   + E IA  AM++A++ICVYTN
Sbjct: 120 GGDVLEPENGIAAIGSGGNFALSAARALCAARDELSLDMTLEYIATAAMAVASEICVYTN 179

Query: 178 HNIVLETLK 186
           +NI++E ++
Sbjct: 180 NNIIMEKIE 188


>gi|317152585|ref|YP_004120633.1| 20S proteasome subunits A/B [Desulfovibrio aespoeensis Aspo-2]
 gi|316942836|gb|ADU61887.1| 20S proteasome A and B subunits [Desulfovibrio aespoeensis Aspo-2]
          Length = 182

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 107/176 (60%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++  TTI+ V+ D    +AGDGQV+LGQ+V MK  ARKVRR+ K  +I GFAG++ADAF
Sbjct: 1   MEIRGTTIIAVKDDNGTAMAGDGQVTLGQSVAMKHTARKVRRIYKDKVIIGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER E KLE Y   LLR++VELAKDWR DKYLR LEAM+L AD    L+I+G GDV+E
Sbjct: 61  TLSERFEGKLETYSGNLLRAAVELAKDWRTDKYLRRLEAMLLAADGEHILIISGTGDVIE 120

Query: 130 PENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           P++G+ AIGSGG YAL+A RAL   T  +A  IA KAM IAA+ICV+TN  IVLET
Sbjct: 121 PDDGLAAIGSGGPYALAAGRALRRNTDFTAAVIATKAMEIAAEICVFTNDKIVLET 176


>gi|84514933|ref|ZP_01002296.1| ATP-dependent protease peptidase subunit [Loktanella vestfoldensis
           SKA53]
 gi|84511092|gb|EAQ07546.1| ATP-dependent protease peptidase subunit [Loktanella vestfoldensis
           SKA53]
          Length = 189

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 126/187 (67%), Positives = 149/187 (79%), Gaps = 3/187 (1%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NII 58
           MV M   ++    H TTI+ VRKDG VVIAGDGQVSLGQTV+K  ARKVRRL  G  ++I
Sbjct: 3   MVTMAQDNFP-GWHGTTIIGVRKDGKVVIAGDGQVSLGQTVIKGTARKVRRLSPGGQDVI 61

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
            GFAGS+ADAFTLLERLEKKLE  P QL R+SVELAKDWR DKYL+ LEAM++++D    
Sbjct: 62  CGFAGSTADAFTLLERLEKKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGKDL 121

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH 178
           LVITG GDVLEPE+ V AIGSGG+YAL+A RALM +  SAEEIAR+AM+IAADICVYTN 
Sbjct: 122 LVITGAGDVLEPEHDVTAIGSGGNYALAAGRALMDSDLSAEEIARRAMAIAADICVYTNG 181

Query: 179 NIVLETL 185
            + +E++
Sbjct: 182 KLTVESI 188


>gi|307297639|ref|ZP_07577445.1| 20S proteasome A and B subunits [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916899|gb|EFN47281.1| 20S proteasome A and B subunits [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 182

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 96/177 (54%), Positives = 131/177 (74%), Gaps = 1/177 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TTIL +RK G  VI GDGQ+++G TVMK  ARKVR+LG G+++AGFAGS ADA TL 
Sbjct: 4   FHGTTILVLRKKGKTVIVGDGQITIGDTVMKGTARKVRKLGDGSVLAGFAGSVADAMTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ E+KL +  + L R++V LAKDWR +K L+NL+A++L+AD+   L+I+G G+V+EP+ 
Sbjct: 64  EKFEEKLHESNSNLKRAAVNLAKDWRTNKILKNLQALLLVADRESILLISGNGEVIEPDE 123

Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            V+AIGSGGSY   +A   L ++Q  AEEIA K+M IA++IC+YTN N  +ETL   
Sbjct: 124 EVLAIGSGGSYALAAARALLRNSQLEAEEIAVKSMEIASEICIYTNTNFTMETLGGE 180


>gi|307718593|ref|YP_003874125.1| ATP-dependent protease HslV [Spirochaeta thermophila DSM 6192]
 gi|306532318|gb|ADN01852.1| ATP-dependent protease HslV [Spirochaeta thermophila DSM 6192]
          Length = 178

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 94/175 (53%), Positives = 132/175 (75%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ +TT++ VR++GVV +AGDGQV++G T+MK NARKVR L  G ++ GFAG++ADAFTL
Sbjct: 3   EVKSTTVIAVRRNGVVAMAGDGQVTMGTTIMKGNARKVRTLYDGRVLVGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KL+++   +LRS+V LAKDWR D+ LR LEA++L+AD+   L+++G GDV+EPE
Sbjct: 63  FERFEGKLKEFSGDVLRSAVALAKDWRTDRMLRRLEALLLVADRERMLLLSGTGDVVEPE 122

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +GV+AIGSGG Y   +A   L  T  SA  IA +++ IAA IC+YTN  I++E L
Sbjct: 123 DGVLAIGSGGPYAHAAAKALLAHTDLSARRIAEESLRIAASICIYTNEQIIVEEL 177


>gi|86159116|ref|YP_465901.1| ATP-dependent protease peptidase subunit [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|123498717|sp|Q2ILD4|HSLV_ANADE RecName: Full=ATP-dependent protease subunit HslV
 gi|85775627|gb|ABC82464.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 181

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 95/178 (53%), Positives = 130/178 (73%), Gaps = 5/178 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MH TT+L VR++G VVIAGDGQV+L +TVMKA ARKVRRLG+G ++AGFAG++ADAF L 
Sbjct: 4   MHGTTVLCVRREGRVVIAGDGQVTLDKTVMKATARKVRRLGEGQVVAGFAGATADAFQLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
           E  EKKL+++   L R++VELAK WR D+ LR LEA++++AD+   LV++G GDV+EP+ 
Sbjct: 64  ELFEKKLKEHARSLPRAAVELAKQWRTDRMLRRLEALLVVADREHVLVLSGAGDVIEPDP 123

Query: 132 ---NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
                 +AIGSGG Y   +A   L  +   A  +A +AM +AA+IC+YTN N+ +E L
Sbjct: 124 VANGAAVAIGSGGPYALAAARALLAHSSLDARRVAEEAMKLAAEICIYTNGNLTIEEL 181


>gi|328948446|ref|YP_004365783.1| ATP-dependent protease hslV [Treponema succinifaciens DSM 2489]
 gi|328448770|gb|AEB14486.1| ATP-dependent protease hslV [Treponema succinifaciens DSM 2489]
          Length = 180

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 93/183 (50%), Positives = 140/183 (76%), Gaps = 4/183 (2%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +++   K+ +TT++ VR++G V +AGDGQV++G TVMK NA+KVRR+  G ++ GFAG
Sbjct: 1   MENEN---KIRSTTVIAVRRNGKVAMAGDGQVTMGNTVMKGNAKKVRRIYDGKVLTGFAG 57

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ++ E+KL+ +   L R++VELAK WR ++ +  LEA++L+AD    L+I+G
Sbjct: 58  ATADAFTLFDKFEEKLKTFNGDLTRAAVELAKLWRTERSMSKLEALLLVADSKKILLISG 117

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+EPEN ++AIGSGG+YA +AA A M +   SA+EIA+K+++IA  IC+YTN N+V+
Sbjct: 118 SGDVIEPENDILAIGSGGNYAYAAAMAYMESSQFSAKEIAQKSLAIAGQICIYTNSNVVV 177

Query: 183 ETL 185
           E L
Sbjct: 178 EEL 180


>gi|257457893|ref|ZP_05623052.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
           vincentii ATCC 35580]
 gi|257444606|gb|EEV19690.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
           vincentii ATCC 35580]
          Length = 179

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 92/175 (52%), Positives = 134/175 (76%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TT++ V+++G V +AGDGQV++G+TVMK NARKVR++  G ++ GFAG++ADAFTL
Sbjct: 5   KVRSTTVIAVKRNGKVAMAGDGQVTMGETVMKGNARKVRKIYDGKVMTGFAGATADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LE+ E +L++Y   + R++VELAK+WR DK L+NLEA++L+AD    L+I+G GDV+EP+
Sbjct: 65  LEKFEGRLKEYSGDITRAAVELAKEWRTDKMLKNLEALLLVADAKTILLISGNGDVIEPQ 124

Query: 132 NGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             V+AIGSGG+    +A   L +T  SA EIA K++SIA  ICVYTN N+ +E +
Sbjct: 125 EEVLAIGSGGNYAYAAALALLRNTDLSAREIAEKSLSIAGQICVYTNENVHIEEI 179


>gi|229170803|ref|YP_233503.2| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           syringae B728a]
 gi|237798088|ref|ZP_04586549.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|302189055|ref|ZP_07265728.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           syringae 642]
 gi|330961996|gb|EGH62256.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330971747|gb|EGH71813.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330977163|gb|EGH77121.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|331020940|gb|EGI00997.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 176

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 100/170 (58%), Positives = 131/170 (77%), Gaps = 1/170 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           A+GSGG     +A   L+ T  SA EIA  ++ IA DICV+TNHNI +E 
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 171


>gi|320322073|gb|EFW78169.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330826|gb|EFW86800.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330872046|gb|EGH06195.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 176

 Score =  167 bits (423), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 100/170 (58%), Positives = 130/170 (76%), Gaps = 1/170 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R+ VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EAQLEKHQGHLVRAVVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           A+GSGG     +A   L+ T  SA EIA  ++ IA DICV+TNHNI +E 
Sbjct: 122 AMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 171


>gi|188990097|ref|YP_001902107.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
           pv. campestris str. B100]
 gi|167731857|emb|CAP50041.1| proteasome-like complex protease subunit [Xanthomonas campestris
           pv. campestris]
          Length = 259

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 102/184 (55%), Positives = 138/184 (75%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG  G ++AGFA
Sbjct: 77  MDPSQNPNVVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 136

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 137 GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 195

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSY   +A   L  T+  A+ IA +A++IA DIC+YTN N+V
Sbjct: 196 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 255

Query: 182 LETL 185
           +E L
Sbjct: 256 VEEL 259


>gi|153840197|ref|ZP_01992864.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
 gi|149746139|gb|EDM57269.1| ATP-dependent protease HslV [Vibrio parahaemolyticus AQ3810]
          Length = 176

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 101/170 (59%), Positives = 131/170 (77%), Gaps = 1/170 (0%)

Query: 22  RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
           R++  VVIAGDGQVSLG TVMK NARKVRRL    ++AGFAG +ADAFTL ERLE KL+ 
Sbjct: 1   RRNNKVVIAGDGQVSLGNTVMKGNARKVRRLYNNKVLAGFAGGTADAFTLFERLESKLQM 60

Query: 82  YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
           +   L +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG
Sbjct: 61  HQGHLTKAAVELAKDWRSDRALRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGG 120

Query: 142 SYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           +YA +AA AL+ +T   A EIA KA++IA DICV+TNH+  +E L    E
Sbjct: 121 AYAQAAATALLENTDLDAREIAEKALNIAGDICVFTNHHHTVEELDSTTE 170


>gi|323489573|ref|ZP_08094800.1| ATP-dependent protease subunit HslV [Planococcus donghaensis
           MPA1U2]
 gi|323396704|gb|EGA89523.1| ATP-dependent protease subunit HslV [Planococcus donghaensis
           MPA1U2]
          Length = 181

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 98/178 (55%), Positives = 126/178 (70%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + HATTI  VR +G   ++GDGQV+ G   VMK  ARKVR+L  G ++ GFAGS ADAFT
Sbjct: 3   EFHATTIFAVRHNGQCAMSGDGQVTFGNAVVMKHTARKVRKLYNGQVLTGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KL +Y   L R++VELAK WR DK LR LEAM++I +K   L+++G G+V+EP
Sbjct: 63  LFEMFEGKLTEYNGNLQRAAVELAKQWRGDKMLRQLEAMLIIMNKDELLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YAL+A RAL         A EIA+ A+  AADICVYTNH IV+E L
Sbjct: 123 DDGILAIGSGGNYALAAGRALKKFAGDHFTASEIAKSALETAADICVYTNHQIVVEEL 180


>gi|260892477|ref|YP_003238574.1| 20S proteasome A and B subunits [Ammonifex degensii KC4]
 gi|260864618|gb|ACX51724.1| 20S proteasome A and B subunits [Ammonifex degensii KC4]
          Length = 177

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 90/177 (50%), Positives = 125/177 (70%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVS-LGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++  TTI+ VR++G   +AGDGQV+    TV+K NARKVRRL +G ++AGFAGS ADA 
Sbjct: 1   MRLEGTTIVAVRRNGRTAMAGDGQVTLAQNTVIKHNARKVRRLYQGRVLAGFAGSVADAL 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E  E K+E+    LLR++V LAK+WR D+    LEA++++AD    L+ITG G+VLE
Sbjct: 61  TLFECFESKIEEAQGNLLRAAVNLAKEWRTDRRFERLEALLVVADTEHLLLITGGGEVLE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G++A+GSGG +   +A   L  T   A  IAR+A+ IAA ICVYTN NIV+E +
Sbjct: 121 PDDGIVAVGSGGPFALAAARALLHHTDYDAATIAREALRIAASICVYTNENIVVEEI 177


>gi|194336303|ref|YP_002018097.1| 20S proteasome A and B subunits [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|238693421|sp|B4SGR7|HSLV_PELPB RecName: Full=ATP-dependent protease subunit HslV
 gi|194308780|gb|ACF43480.1| 20S proteasome A and B subunits [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 182

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 94/182 (51%), Positives = 133/182 (73%), Gaps = 2/182 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +    V + +TT++ V +DG   +  DGQ++LG TV+K + RK+RRL  G ++AGFAG
Sbjct: 1   MKNNQRPV-IRSTTVIGVIRDGKAALGSDGQMTLGNTVIKHSTRKIRRLYHGKLVAGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TLL+R E+KLE Y  +L R++VELA+DWR DKYLR LEAM+ I      L+I+G
Sbjct: 60  ATADAVTLLDRFEEKLEAYNGKLDRAAVELARDWRTDKYLRRLEAMLAIVSHDKALIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+EPE+G++AIGSG  YAL+AAR+LM      A+EI  +++ IAADIC+YTN +I++
Sbjct: 120 TGDVIEPEDGIVAIGSGSMYALAAARSLMKHSSLPAKEIVLESLKIAADICIYTNDHIIV 179

Query: 183 ET 184
           E 
Sbjct: 180 EE 181


>gi|94309076|ref|YP_582286.1| ATP-dependent protease peptidase subunit [Cupriavidus metallidurans
           CH34]
 gi|166222992|sp|Q1LS59|HSLV_RALME RecName: Full=ATP-dependent protease subunit HslV
 gi|93352928|gb|ABF07017.1| peptidase component of the HslUV protease [Cupriavidus
           metallidurans CH34]
          Length = 178

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 135/176 (76%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+  G ++ GFAGS+ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE+Y   L R++V+LAKDWR D+ LR LEAM++ ADK  TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADKDTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA SAA+AL+ +T+   +++  KA++IA ++C+YTN N V+ETL 
Sbjct: 123 GGIAAIGSGGAYAQSAAKALVENTELPPKDVVEKALTIAGELCIYTNTNFVIETLD 178


>gi|228992558|ref|ZP_04152485.1| ATP-dependent protease hslV [Bacillus pseudomycoides DSM 12442]
 gi|228998606|ref|ZP_04158193.1| ATP-dependent protease hslV [Bacillus mycoides Rock3-17]
 gi|229006106|ref|ZP_04163794.1| ATP-dependent protease hslV [Bacillus mycoides Rock1-4]
 gi|228755182|gb|EEM04539.1| ATP-dependent protease hslV [Bacillus mycoides Rock1-4]
 gi|228761074|gb|EEM10033.1| ATP-dependent protease hslV [Bacillus mycoides Rock3-17]
 gi|228767192|gb|EEM15828.1| ATP-dependent protease hslV [Bacillus pseudomycoides DSM 12442]
          Length = 180

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 96/177 (54%), Positives = 129/177 (72%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  +  +G   +AGDGQV+ G   VMK  ARKVR+L +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAIHHNGECAMAGDGQVTFGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM+++ D+T  L+++G G+V+EP+
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDQTTLLLVSGTGEVIEPD 123

Query: 132 NGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG YAL+A RAL        +A+ IA+ ++ IA DICVYTNHNI++E L
Sbjct: 124 DGILAIGSGGHYALAAGRALKQHASEHLTAKAIAKASLEIAGDICVYTNHNIIVEEL 180


>gi|239636269|ref|ZP_04677271.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           warneri L37603]
 gi|239597624|gb|EEQ80119.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           warneri L37603]
 gi|330685681|gb|EGG97322.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           epidermidis VCU121]
          Length = 181

 Score =  167 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 135/177 (76%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL  G ++AGFAGS ADAFT
Sbjct: 5   SLHATTIYAVRHNGGAAMAGDGQVTLGQQVIMKQTARKVRRLYDGKVLAGFAGSVADAFT 64

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK   LV++G G+V+ P
Sbjct: 65  LFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAP 124

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL     Q SAEE+A +++ +A+DICV+TN NI++ETL
Sbjct: 125 DDDLIAIGSGGNYALSAGRALKRHAGQMSAEEMAYESLKVASDICVFTNDNIIVETL 181


>gi|224476376|ref|YP_002633982.1| ATP-dependent protease peptidase subunit [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|254765619|sp|B9DPG5|HSLV_STACT RecName: Full=ATP-dependent protease subunit HslV
 gi|222420983|emb|CAL27797.1| ATP-dependent protease HslV [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 179

 Score =  167 bits (422), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 95/176 (53%), Positives = 135/176 (76%), Gaps = 2/176 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  +R++G   +AGDGQV+LG Q +MK  ARKVRRL  G ++AGFAGS ADAFT
Sbjct: 4   SIHATTIFAIRQNGHAAMAGDGQVTLGEQVIMKQTARKVRRLYDGKVLAGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+++   L R++VELA++WR DK LR LEAM+++ DK   LV++G G+V+ P
Sbjct: 64  LFEKFETKLQEFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKNSILVVSGTGEVISP 123

Query: 131 ENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL   T+ SA++IA  ++ +A++ICV+TN NI++E L
Sbjct: 124 DDDLIAIGSGGNYALSAGRALKRHTEMSAKDIAYASLKVASEICVFTNDNIIVEEL 179


>gi|257419374|ref|ZP_05596368.1| 20S proteasome peptidase subunit [Enterococcus faecalis T11]
 gi|257161202|gb|EEU91162.1| 20S proteasome peptidase subunit [Enterococcus faecalis T11]
          Length = 182

 Score =  167 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 91/178 (51%), Positives = 134/178 (75%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + H+TTI  V KDG   +AGDGQV++G   VMK  A+KVRR+    ++ GFAGS ADAFT
Sbjct: 5   QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 64

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ +K   L+++G G+V+ P
Sbjct: 65  LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 124

Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG++ALSAARA+ +    + SA+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 125 DDGILAIGSGGNFALSAARAMKNFGDKEMSAKEIAKNALNIAADICVFTNHNIIVEEL 182


>gi|116747517|ref|YP_844204.1| ATP-dependent protease peptidase subunit [Syntrophobacter
           fumaroxidans MPOB]
 gi|189036246|sp|A0LEB7|HSLV_SYNFM RecName: Full=ATP-dependent protease subunit HslV
 gi|116696581|gb|ABK15769.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
           family T01B [Syntrophobacter fumaroxidans MPOB]
          Length = 179

 Score =  167 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 98/173 (56%), Positives = 130/173 (75%), Gaps = 1/173 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT+L ++KDG VV+AGDGQV++G TV+K  A+KVR++    I+ GF+GS+ADAFTL E
Sbjct: 7   HGTTVLAIKKDGKVVMAGDGQVTMGDTVVKHQAKKVRKMYHDRILTGFSGSTADAFTLFE 66

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           RLE KLEQY   L R++VELAKDWRMD+ LR LEA+++ AD+    +++G GDV+EP++G
Sbjct: 67  RLEGKLEQYNGNLKRAAVELAKDWRMDRALRRLEALLVAADRNDCFILSGTGDVIEPDDG 126

Query: 134 VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + A+GSG  YAL+AARAL   T  S  EIA +AM+IAA IC+YTN     E L
Sbjct: 127 LAAVGSGAPYALAAARALIRHTGMSIREIAEEAMNIAASICIYTNREFTFEEL 179


>gi|260220004|emb|CBA27108.1| ATP-dependent protease hslV [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 181

 Score =  167 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 96/179 (53%), Positives = 133/179 (74%), Gaps = 5/179 (2%)

Query: 12  KMHATTILTVRKDG----VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           + H TTI++VR+       V I GDGQV+LG  V+K  ARKVR+L  G ++AGFAG++AD
Sbjct: 3   QFHGTTIISVRRQTPTGMQVAIGGDGQVTLGNIVIKGTARKVRKLYHGKVLAGFAGATAD 62

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL ER E KLE++   L+R+++EL KDWR D+ LR LEAM+ +ADK  +L+ITG GDV
Sbjct: 63  AFTLFERFEAKLEKHQGHLVRAAIELTKDWRTDRVLRKLEAMLAVADKDASLIITGNGDV 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           LEPENG++ IGSGG+YA +AA AL++    SA +I ++++ IA ++C+YTN N  +ETL
Sbjct: 123 LEPENGIVTIGSGGAYAQAAAVALLNHSDLSAADIVKRSLEIAGELCIYTNMNHTIETL 181


>gi|297569002|ref|YP_003690346.1| 20S proteasome A and B subunits [Desulfurivibrio alkaliphilus AHT2]
 gi|296924917|gb|ADH85727.1| 20S proteasome A and B subunits [Desulfurivibrio alkaliphilus AHT2]
          Length = 176

 Score =  167 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 89/176 (50%), Positives = 128/176 (72%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +++ +TT++ VR   +V +AGDGQV+LG  V+K  ARK+RRL  G +I GFAG++ADAFT
Sbjct: 1   MQVRSTTVVAVRHREMVAMAGDGQVTLGNVVVKHQARKIRRLYHGRVITGFAGATADAFT 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L ++LE++LEQY   LLR++VELAK+WR D+ LR LEAM++  D   +L+++G GDV+EP
Sbjct: 61  LFDKLEQQLEQYSGNLLRAAVELAKEWRTDRMLRRLEAMMVAVDAERSLLLSGNGDVIEP 120

Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG Y   +A   +  +   A EI R AM IA  +C+YTN +I LE L
Sbjct: 121 DDGILAIGSGGPYAHAAAKALVAHSGLDAPEICRAAMEIAGGLCIYTNDSIHLEVL 176


>gi|78188753|ref|YP_379091.1| ATP-dependent protease peptidase subunit [Chlorobium
           chlorochromatii CaD3]
 gi|123580058|sp|Q3ASH7|HSLV_CHLCH RecName: Full=ATP-dependent protease subunit HslV
 gi|78170952|gb|ABB28048.1| heat shock protein HslV [Chlorobium chlorochromatii CaD3]
          Length = 182

 Score =  167 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 96/183 (52%), Positives = 138/183 (75%), Gaps = 2/183 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M       ++ +TT++ V ++G   +  DGQ++LG TV+K + +K+RRL +G ++AGFAG
Sbjct: 1   MKHTSLP-EIRSTTVIGVIRNGQAALGSDGQMTLGNTVVKHSTKKIRRLYQGKLLAGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TLL+R E KLE +  +L R+SVELA+DWR DKYLR LEAMI I      L+I+G
Sbjct: 60  ATADALTLLDRFEAKLEAFGGKLERASVELARDWRTDKYLRRLEAMIAIVSNDRALIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+EPE+G++AIGSG  YAL+AAR+LM  T  SA+EI +++++IAADIC+YTN++IV+
Sbjct: 120 TGDVIEPEDGIVAIGSGSMYALAAARSLMKHTSLSAQEIVQESLAIAADICIYTNNHIVV 179

Query: 183 ETL 185
           E L
Sbjct: 180 EEL 182


>gi|197335089|ref|YP_002157072.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Vibrio fischeri MJ11]
 gi|238065951|sp|B5FBL7|HSLV_VIBFM RecName: Full=ATP-dependent protease subunit HslV
 gi|197316579|gb|ACH66026.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Vibrio fischeri MJ11]
          Length = 174

 Score =  167 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 91/173 (52%), Positives = 127/173 (73%), Gaps = 1/173 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+AGDGQ S G  + K N +KVRRL   +++ GFAGS+ADAF L +  
Sbjct: 2   TTIVSVRREGKVVVAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLC 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAK+WR D+ LR LEAM+++ADKT +L+I+G GD++  +N ++
Sbjct: 62  ERKLEMHQGNLTKAAVELAKEWRSDRALRRLEAMLIVADKTTSLIISGTGDLINADNDLL 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            IGSGG +A SAA AL+ +T   A EIA KA++IA DI VYTNHN  +E L  
Sbjct: 122 TIGSGGYFARSAATALLENTDLDAREIATKALTIAGDIDVYTNHNHTVEELNA 174


>gi|254369291|ref|ZP_04985303.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122241|gb|EDO66381.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 183

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 94/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TTIL VRK   VVI GDGQ +LG T+ K N  KVR+L  G ++ GFAGS+ADAFTL 
Sbjct: 4   IRGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL-EPE 131
           E+ E+KLE Y   L R++VE+ ++WR+D+ L  LEAMI++AD+ ++L+I+G GDV+   +
Sbjct: 64  EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 123

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           N +++IGSG +YA SAA AL+ +T  SAEEI RK+++IAAD C+YTNHN  +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179


>gi|315027187|gb|EFT39119.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX2137]
          Length = 194

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 90/178 (50%), Positives = 132/178 (74%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + H+TTI  V KDG   +AGDGQV++G   VMK  A+KVRR+    ++ GFAGS ADAFT
Sbjct: 17  QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ +K   L+++G G+V+ P
Sbjct: 77  LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136

Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G +AIGSGG++ALSAARA+ +    +  A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 137 DDGFLAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 194


>gi|15606773|ref|NP_214153.1| ATP-dependent protease peptidase subunit [Aquifex aeolicus VF5]
 gi|11132846|sp|O67587|HSLV_AQUAE RecName: Full=ATP-dependent protease subunit HslV
 gi|2984006|gb|AAC07551.1| heat shock protein HsLV [Aquifex aeolicus VF5]
          Length = 176

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 93/176 (52%), Positives = 128/176 (72%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +++ ATTIL VR+DG   + GDGQV+LG +V+K  ARK+R+L KG +I GFAGS+AD   
Sbjct: 1   MEVKATTILAVRRDGKTAVGGDGQVTLGSSVIKHTARKIRKLYKGQVIVGFAGSAADGLA 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L+ERLE KLE+Y   LL++SV+LAKDWRMDKYLR LEA++L  D+   L+I+G GD++EP
Sbjct: 61  LMERLEAKLEEYRGNLLKASVQLAKDWRMDKYLRRLEALLLAVDREHMLLISGNGDIIEP 120

Query: 131 ENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +  V+AIGSGG     +A     +T  SA EI  K++ IA++IC+YTN   V+E +
Sbjct: 121 DEPVLAIGSGGDYARAAALALYRNTDLSAREIVEKSLKIASEICIYTNDKFVIEEI 176


>gi|167627817|ref|YP_001678317.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|241668378|ref|ZP_04755956.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254876911|ref|ZP_05249621.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|167597818|gb|ABZ87816.1| ATP-dependent protease HslVU, peptidase subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|254842932|gb|EET21346.1| ATP-dependent protease peptidase subunit [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 183

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  TTIL VRK   VVI GDGQ +LG T+ K N  KVR+L  G ++ GFAGS+ADAFTL 
Sbjct: 4   MKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL-EPE 131
           E+ E+KLE Y   L R++VE+ ++WR+D+ L  LEAMI++AD+ ++L+I+G GDV+   +
Sbjct: 64  EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 123

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           N +++IGSG +YA SAA AL+ +T  SAEEI RK+++IAAD C+YTNHN  +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179


>gi|308271352|emb|CBX27960.1| ATP-dependent protease hslV [uncultured Desulfobacterium sp.]
          Length = 194

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 93/181 (51%), Positives = 121/181 (66%), Gaps = 1/181 (0%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            ++  +  H TTIL VR    + +AGDGQV+L   V+K  A+KVRR+    II GFAG++
Sbjct: 14  QENEIMNFHGTTILAVRHKDKIAVAGDGQVTLNNMVVKHTAKKVRRIYNDTIIVGFAGAT 73

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADA  L ERLE KLE+Y   L RS+VELAKDWR DKYLR LEA+++  D T   +I+G G
Sbjct: 74  ADALNLSERLEGKLERYNGNLTRSAVELAKDWRTDKYLRRLEALMIAVDNTRIFLISGNG 133

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLET 184
           DV+EP+ G + IGSGG  A +AA AL+     SA EI  ++M IA+ +CVYTN  I +E 
Sbjct: 134 DVIEPDEGFIGIGSGGIGAQAAAAALIKHSNLSAREIVEESMKIASSLCVYTNDKITIEE 193

Query: 185 L 185
           L
Sbjct: 194 L 194


>gi|330836613|ref|YP_004411254.1| ATP-dependent protease hslV [Spirochaeta coccoides DSM 17374]
 gi|329748516|gb|AEC01872.1| ATP-dependent protease hslV [Spirochaeta coccoides DSM 17374]
          Length = 177

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 129/177 (72%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TTI+ VR+ G V IAGDGQV+ G TVMK NARKVR L  G II GFAG++ADAFT
Sbjct: 1   MSFKGTTIIAVRRGGHVAIAGDGQVTAGDTVMKGNARKVRTLYDGKIIIGFAGATADAFT 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KL+++   L R++V+LAK+WR+D+ LR LEAM+L +D +   +I+G GDVLEP
Sbjct: 61  LFELFETKLKKFNGDLTRAAVDLAKEWRIDRNLRRLEAMMLASDGSKIFLISGTGDVLEP 120

Query: 131 ENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSIAADICVYTNHNIVLETL 185
           E   + IGSGGSYA +AARA + +    SAEEIARK++ IAA IC+YTN +I +E L
Sbjct: 121 EYDAIGIGSGGSYAYAAARAYLDSDTSSSAEEIARKSLEIAAHICIYTNTSINVEVL 177


>gi|33152976|ref|NP_874329.1| ATP-dependent protease peptidase subunit [Haemophilus ducreyi
           35000HP]
 gi|47605650|sp|Q7VKB4|HSLV_HAEDU RecName: Full=ATP-dependent protease subunit HslV
 gi|33149201|gb|AAP96718.1| ATP-dependent protease HslV [Haemophilus ducreyi 35000HP]
          Length = 173

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 92/171 (53%), Positives = 127/171 (74%), Gaps = 2/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRKDG V I GDGQ +LG  V K   RKVRRL K  +I GFAGS+ADAF L +  
Sbjct: 2   TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRLYKDKVITGFAGSTADAFILRDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++S+VELAK+WR ++ LR LEAM+++A+++  L+++G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLVKSAVELAKEWRTERALRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121

Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG++A SAA AL+ T+   +A++I  +A+ IA DI +Y+NHN V+E 
Sbjct: 122 AIGSGGNFAKSAALALLRTENNLTAKQIVAEALKIAGDIDIYSNHNHVIEE 172


>gi|254796565|ref|YP_003081401.1| ATP-dependent protease HslV [Neorickettsia risticii str. Illinois]
 gi|254589802|gb|ACT69164.1| ATP-dependent protease HslV [Neorickettsia risticii str. Illinois]
          Length = 187

 Score =  166 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 129/177 (72%), Gaps = 3/177 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            H TTIL++RK   VV+ GDGQV++G   V+K+ A+KV+RL  G II+GFAGS+ADAFTL
Sbjct: 4   FHGTTILSIRKGDKVVMIGDGQVTMGNAVVVKSTAQKVKRLSNGKIISGFAGSTADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLE +P QLLRS VELAKDWR DK+LR LEAM+++AD   T ++ G GDV+EPE
Sbjct: 64  FERLESKLEAHPGQLLRSCVELAKDWRTDKFLRRLEAMMIVADARGTFILNGAGDVIEPE 123

Query: 132 NGVMAIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + V AIGSGG+Y  A + A  + ++   A +IA  AM IAA ICV+TN N  +E + 
Sbjct: 124 DSVAAIGSGGNYALAAAKALVVHASDLDAFQIAEAAMKIAAKICVFTNENFTVEVID 180


>gi|229577466|ref|YP_001170893.2| ATP-dependent protease peptidase subunit [Pseudomonas stutzeri
           A1501]
 gi|327479008|gb|AEA82318.1| ATP-dependent protease peptidase subunit [Pseudomonas stutzeri DSM
           4166]
          Length = 178

 Score =  166 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 94/175 (53%), Positives = 129/175 (73%), Gaps = 3/175 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VV+ GDGQVSLG TVMK NA+KVRRL  G ++AGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV++PE+ ++
Sbjct: 62  EGQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVQPEDDLI 121

Query: 136 AIGSGGSY---ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           A+GSGG +   A  A         SA+EIA  A++IA  ICV+TN N+ +E L  
Sbjct: 122 AMGSGGGFAQAAAKALLLKAGADMSAQEIAETALNIAGSICVFTNQNLTIEELDS 176


>gi|89256314|ref|YP_513676.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. holarctica LVS]
 gi|118497587|ref|YP_898637.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. novicida U112]
 gi|134302009|ref|YP_001121978.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|167010171|ref|ZP_02275102.1| ATP-dependent protease HslV [Francisella tularensis subsp.
           holarctica FSC200]
 gi|187931846|ref|YP_001891831.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|195536285|ref|ZP_03079292.1| ATP-dependent protease HslV [Francisella tularensis subsp. novicida
           FTE]
 gi|208779387|ref|ZP_03246733.1| ATP-dependent protease HslV [Francisella novicida FTG]
 gi|224456877|ref|ZP_03665350.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254367646|ref|ZP_04983667.1| T01 family hslV component of hslUV peptidase (clpQ) [Francisella
           tularensis subsp. holarctica 257]
 gi|254370305|ref|ZP_04986310.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254372952|ref|ZP_04988441.1| hypothetical protein FTCG_00523 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|254374403|ref|ZP_04989885.1| ATP dependent protease HslV [Francisella novicida GA99-3548]
 gi|254874622|ref|ZP_05247332.1| hslV, ATP-dependent protease, proteasome-related peptidase subunit
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|290953148|ref|ZP_06557769.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. holarctica URFT1]
 gi|295313676|ref|ZP_06804260.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. holarctica URFT1]
 gi|89144145|emb|CAJ79404.1| ATP-dependent protease, proteasome-related peptidase subunit
           [Francisella tularensis subsp. holarctica LVS]
 gi|118423493|gb|ABK89883.1| ATP-dependent protease HslVU, peptidase subunit [Francisella
           novicida U112]
 gi|134049786|gb|ABO46857.1| ATP dependent protease HslV [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134253457|gb|EBA52551.1| T01 family hslV component of hslUV peptidase (clpQ) [Francisella
           tularensis subsp. holarctica 257]
 gi|151568548|gb|EDN34202.1| ATP-dependent protease HslVU [Francisella tularensis subsp.
           tularensis FSC033]
 gi|151570679|gb|EDN36333.1| hypothetical protein FTCG_00523 [Francisella novicida GA99-3549]
 gi|151572123|gb|EDN37777.1| ATP dependent protease HslV [Francisella novicida GA99-3548]
 gi|187712755|gb|ACD31052.1| ATP-dependent protease HslV, peptidase subunit [Francisella
           tularensis subsp. mediasiatica FSC147]
 gi|194372762|gb|EDX27473.1| ATP-dependent protease HslV [Francisella tularensis subsp. novicida
           FTE]
 gi|208745187|gb|EDZ91485.1| ATP-dependent protease HslV [Francisella novicida FTG]
 gi|254840621|gb|EET19057.1| hslV, ATP-dependent protease, proteasome-related peptidase subunit
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|332678289|gb|AEE87418.1| ATP-dependent protease HslV [Francisella cf. novicida Fx1]
          Length = 183

 Score =  166 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 94/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TTIL VRK   VVI GDGQ +LG T+ K N  KVR+L  G ++ GFAGS+ADAFTL 
Sbjct: 4   IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL-EPE 131
           E+ E+KLE Y   L R++VE+ ++WR+D+ L  LEAMI++AD+ ++L+I+G GDV+   +
Sbjct: 64  EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVADEKLSLLISGAGDVMAADK 123

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           N +++IGSG +YA SAA AL+ +T  SAEEI RK+++IAAD C+YTNHN  +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179


>gi|227551196|ref|ZP_03981245.1| T01 family HslV component of HslUV peptidase [Enterococcus faecium
           TX1330]
 gi|257887687|ref|ZP_05667340.1| 20S proteasome protein [Enterococcus faecium 1,141,733]
 gi|257896181|ref|ZP_05675834.1| 20S proteasome protein [Enterococcus faecium Com12]
 gi|257898818|ref|ZP_05678471.1| 20S proteasome protein [Enterococcus faecium Com15]
 gi|293377181|ref|ZP_06623389.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium PC4.1]
 gi|293570279|ref|ZP_06681348.1| ATP-dependent protease HslV [Enterococcus faecium E980]
 gi|227179664|gb|EEI60636.1| T01 family HslV component of HslUV peptidase [Enterococcus faecium
           TX1330]
 gi|257823741|gb|EEV50673.1| 20S proteasome protein [Enterococcus faecium 1,141,733]
 gi|257832746|gb|EEV59167.1| 20S proteasome protein [Enterococcus faecium Com12]
 gi|257836730|gb|EEV61804.1| 20S proteasome protein [Enterococcus faecium Com15]
 gi|291609686|gb|EFF38947.1| ATP-dependent protease HslV [Enterococcus faecium E980]
 gi|292644201|gb|EFF62303.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium PC4.1]
          Length = 182

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 89/177 (50%), Positives = 132/177 (74%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            H+TTI  V KDG   +AGDGQV++G   VMK  A+KVRR+  G ++ GFAGS ADAFTL
Sbjct: 6   FHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNGEVVVGFAGSVADAFTL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ ++   L+++G G+V+ P+
Sbjct: 66  EEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNEKEMLLVSGTGEVITPD 125

Query: 132 NGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG++AL+AARA+ +      SA+EIA  A++IAADIC++TNHNI++E L
Sbjct: 126 DGILAIGSGGNFALAAARAMKNYAQNDMSAKEIAENALNIAADICIFTNHNIIVEEL 182


>gi|325971100|ref|YP_004247291.1| ATP-dependent protease hslV [Spirochaeta sp. Buddy]
 gi|324026338|gb|ADY13097.1| ATP-dependent protease hslV [Spirochaeta sp. Buddy]
          Length = 178

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 93/176 (52%), Positives = 123/176 (69%), Gaps = 2/176 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
               TTI+ VRKDG V IAGDGQV+ G T++K+NA KVR L  G +I GFAG++ADAFTL
Sbjct: 3   SFKGTTIVAVRKDGHVAIAGDGQVTAGDTILKSNAHKVRTLYDGKVITGFAGTTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KL+Q+   L RS+VELAK WR+DK LR LEAM+L++D     +I G GDV++PE
Sbjct: 63  FELFETKLKQFNGDLTRSAVELAKQWRVDKQLRQLEAMMLVSDGKRIFLINGAGDVVDPE 122

Query: 132 NGVMAIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
              + IGSGG+Y  + + A    S   SAE+IARK++ IAA +C+YT+ +I +E L
Sbjct: 123 RDAIGIGSGGNYALSAALAYLEASPTMSAEQIARKSVEIAAKLCIYTDDSINVEVL 178


>gi|29376201|ref|NP_815355.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           V583]
 gi|255972715|ref|ZP_05423301.1| 20S proteasome [Enterococcus faecalis T1]
 gi|255975767|ref|ZP_05426353.1| 20S proteasome [Enterococcus faecalis T2]
 gi|256619142|ref|ZP_05475988.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           ATCC 4200]
 gi|256762578|ref|ZP_05503158.1| 20S proteasome [Enterococcus faecalis T3]
 gi|256853204|ref|ZP_05558574.1| heat shock protein HslV [Enterococcus faecalis T8]
 gi|256959058|ref|ZP_05563229.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           DS5]
 gi|256961849|ref|ZP_05566020.1| hypothetical protein EFGG_00927 [Enterococcus faecalis Merz96]
 gi|256965046|ref|ZP_05569217.1| hypothetical protein EFHG_00342 [Enterococcus faecalis HIP11704]
 gi|257079089|ref|ZP_05573450.1| hypothetical protein EFIG_00354 [Enterococcus faecalis JH1]
 gi|257082472|ref|ZP_05576833.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           E1Sol]
 gi|257085104|ref|ZP_05579465.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           Fly1]
 gi|257086665|ref|ZP_05581026.1| hypothetical protein EFLG_00256 [Enterococcus faecalis D6]
 gi|257089963|ref|ZP_05584324.1| 20S proteasome peptidase subunit [Enterococcus faecalis CH188]
 gi|257416172|ref|ZP_05593166.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           AR01/DG]
 gi|257422532|ref|ZP_05599522.1| heat shock protein hslV [Enterococcus faecalis X98]
 gi|294781640|ref|ZP_06746976.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis PC1.1]
 gi|300860692|ref|ZP_07106779.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|47605678|sp|Q834K3|HSLV_ENTFA RecName: Full=ATP-dependent protease subunit HslV
 gi|29343664|gb|AAO81425.1| heat shock protein HslV [Enterococcus faecalis V583]
 gi|255963733|gb|EET96209.1| 20S proteasome [Enterococcus faecalis T1]
 gi|255968639|gb|EET99261.1| 20S proteasome [Enterococcus faecalis T2]
 gi|256598669|gb|EEU17845.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           ATCC 4200]
 gi|256683829|gb|EEU23524.1| 20S proteasome [Enterococcus faecalis T3]
 gi|256711663|gb|EEU26701.1| heat shock protein HslV [Enterococcus faecalis T8]
 gi|256949554|gb|EEU66186.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           DS5]
 gi|256952345|gb|EEU68977.1| hypothetical protein EFGG_00927 [Enterococcus faecalis Merz96]
 gi|256955542|gb|EEU72174.1| hypothetical protein EFHG_00342 [Enterococcus faecalis HIP11704]
 gi|256987119|gb|EEU74421.1| hypothetical protein EFIG_00354 [Enterococcus faecalis JH1]
 gi|256990502|gb|EEU77804.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           E1Sol]
 gi|256993134|gb|EEU80436.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           Fly1]
 gi|256994695|gb|EEU81997.1| hypothetical protein EFLG_00256 [Enterococcus faecalis D6]
 gi|256998775|gb|EEU85295.1| 20S proteasome peptidase subunit [Enterococcus faecalis CH188]
 gi|257158000|gb|EEU87960.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           ARO1/DG]
 gi|257164356|gb|EEU94316.1| heat shock protein hslV [Enterococcus faecalis X98]
 gi|294451336|gb|EFG19802.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis PC1.1]
 gi|295113044|emb|CBL31681.1| ATP dependent peptidase CodWX, CodW component. Threonine peptidase.
           MEROPS family T01B [Enterococcus sp. 7L76]
 gi|300849731|gb|EFK77481.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|323480808|gb|ADX80247.1| ATP-dependent protease HslV [Enterococcus faecalis 62]
          Length = 182

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 90/178 (50%), Positives = 133/178 (74%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + H+TTI  V KDG   +AGDGQV++G   VMK  A+KVRR+    ++ GFAGS ADAFT
Sbjct: 5   QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 64

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ +K   L+++G G+V+ P
Sbjct: 65  LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 124

Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG++ALSAARA+ +    +  A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 125 DDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 182


>gi|294507659|ref|YP_003571717.1| ATP-dependent protease hslV [Salinibacter ruber M8]
 gi|294343987|emb|CBH24765.1| ATP-dependent protease hslV [Salinibacter ruber M8]
          Length = 187

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 91/179 (50%), Positives = 131/179 (73%), Gaps = 2/179 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATT+L VR +G + +  DGQ ++ +TV+K  A KVR L  G+I+AGFAGS+ADAFTL E
Sbjct: 9   HATTVLGVRHNGQIALGSDGQATMNETVVKHKAEKVRSLYDGDILAGFAGSTADAFTLFE 68

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R E+KL++Y   + R++VELAK+WR DKYLR LEA++ +A     L+I+G GDV+EP++ 
Sbjct: 69  RFEEKLQEYGGNVARAAVELAKEWRTDKYLRRLEALLAVASPGELLLISGAGDVIEPDDD 128

Query: 134 VMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           ++AIGSGGS+AL+A+RAL+      +A +I    +SIAADIC+YTNHN  +  ++   +
Sbjct: 129 IIAIGSGGSFALAASRALLQNAQGLTARDIVENGLSIAADICIYTNHNRTIRDIEAESD 187


>gi|15924243|ref|NP_371777.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|15926836|ref|NP_374369.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus N315]
 gi|21282865|ref|NP_645953.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49483416|ref|YP_040640.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|49486092|ref|YP_043313.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57651822|ref|YP_186128.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus COL]
 gi|87160493|ref|YP_493843.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88194961|ref|YP_499761.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|148267743|ref|YP_001246686.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150393801|ref|YP_001316476.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus JH1]
 gi|151221375|ref|YP_001332197.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156979574|ref|YP_001441833.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|161509419|ref|YP_001575078.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|221142043|ref|ZP_03566536.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus str. JKD6009]
 gi|253731872|ref|ZP_04866037.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253733509|ref|ZP_04867674.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|255006040|ref|ZP_05144641.2| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|257425307|ref|ZP_05601732.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427968|ref|ZP_05604366.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257430601|ref|ZP_05606983.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433361|ref|ZP_05609719.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus E1410]
 gi|257436203|ref|ZP_05612250.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus M876]
 gi|257795691|ref|ZP_05644670.1| heat shock protein HslV [Staphylococcus aureus A9781]
 gi|258415915|ref|ZP_05682185.1| heat shock protein HslV [Staphylococcus aureus A9763]
 gi|258421677|ref|ZP_05684601.1| heat shock protein HslV [Staphylococcus aureus A9719]
 gi|258423906|ref|ZP_05686791.1| heat shock protein HslVU [Staphylococcus aureus A9635]
 gi|258434833|ref|ZP_05688907.1| heat shock protein HslV [Staphylococcus aureus A9299]
 gi|258444591|ref|ZP_05692920.1| heat shock protein HslVU [Staphylococcus aureus A8115]
 gi|258447576|ref|ZP_05695720.1| heat shock protein HslVU [Staphylococcus aureus A6300]
 gi|258449418|ref|ZP_05697521.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           A6224]
 gi|258452552|ref|ZP_05700558.1| heat shock protein HslV [Staphylococcus aureus A5948]
 gi|258454797|ref|ZP_05702761.1| heat shock protein HslV [Staphylococcus aureus A5937]
 gi|262048147|ref|ZP_06021034.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           D30]
 gi|262051315|ref|ZP_06023538.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           930918-3]
 gi|269202869|ref|YP_003282138.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282892741|ref|ZP_06300976.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus A8117]
 gi|282903808|ref|ZP_06311696.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905571|ref|ZP_06313426.1| ATP-dependent HslUV protease peptidase subunit HslV [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282908546|ref|ZP_06316376.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910825|ref|ZP_06318628.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914030|ref|ZP_06321817.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           aureus subsp. aureus M899]
 gi|282916513|ref|ZP_06324271.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus subsp. aureus D139]
 gi|282918952|ref|ZP_06326687.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
           C427]
 gi|282920497|ref|ZP_06328218.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus A9765]
 gi|282924075|ref|ZP_06331751.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus subsp. aureus C101]
 gi|282927595|ref|ZP_06335211.1| ATP-dependent protease hslV [Staphylococcus aureus A10102]
 gi|283770317|ref|ZP_06343209.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
           H19]
 gi|284024246|ref|ZP_06378644.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus 132]
 gi|293501062|ref|ZP_06666913.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510024|ref|ZP_06668732.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526610|ref|ZP_06671295.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           aureus subsp. aureus M1015]
 gi|294848248|ref|ZP_06788995.1| ATP-dependent HslUV protease [Staphylococcus aureus A9754]
 gi|295406189|ref|ZP_06815996.1| ATP-dependent HslUV protease [Staphylococcus aureus A8819]
 gi|295427740|ref|ZP_06820372.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|296274811|ref|ZP_06857318.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297208101|ref|ZP_06924532.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297244417|ref|ZP_06928300.1| ATP-dependent protease hslV [Staphylococcus aureus A8796]
 gi|297591302|ref|ZP_06949940.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300912182|ref|ZP_07129625.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304381183|ref|ZP_07363836.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|54037329|sp|P65797|HSLV_STAAN RecName: Full=ATP-dependent protease subunit HslV
 gi|54037330|sp|P65798|HSLV_STAAW RecName: Full=ATP-dependent protease subunit HslV
 gi|54041541|sp|P65796|HSLV_STAAM RecName: Full=ATP-dependent protease subunit HslV
 gi|56748979|sp|Q6G9W0|HSLV_STAAS RecName: Full=ATP-dependent protease subunit HslV
 gi|56749033|sp|Q6GHI2|HSLV_STAAR RecName: Full=ATP-dependent protease subunit HslV
 gi|71152139|sp|Q5HGH9|HSLV_STAAC RecName: Full=ATP-dependent protease subunit HslV
 gi|122539695|sp|Q2FZ29|HSLV_STAA8 RecName: Full=ATP-dependent protease subunit HslV
 gi|123486189|sp|Q2FHI5|HSLV_STAA3 RecName: Full=ATP-dependent protease subunit HslV
 gi|166223003|sp|A7X1M9|HSLV_STAA1 RecName: Full=ATP-dependent protease subunit HslV
 gi|172048863|sp|A6QGF3|HSLV_STAAE RecName: Full=ATP-dependent protease subunit HslV
 gi|189036243|sp|A6U171|HSLV_STAA2 RecName: Full=ATP-dependent protease subunit HslV
 gi|189036244|sp|A5ISD7|HSLV_STAA9 RecName: Full=ATP-dependent protease subunit HslV
 gi|189036245|sp|A8Z3T3|HSLV_STAAT RecName: Full=ATP-dependent protease subunit HslV
 gi|13701053|dbj|BAB42348.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus N315]
 gi|14247023|dbj|BAB57415.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204304|dbj|BAB95001.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus MW2]
 gi|49241545|emb|CAG40231.1| putative ATP-dependent protease [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49244535|emb|CAG42964.1| putative ATP-dependent protease [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57286008|gb|AAW38102.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           aureus subsp. aureus COL]
 gi|87126467|gb|ABD20981.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202519|gb|ABD30329.1| heat shock protein HslV, putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|147740812|gb|ABQ49110.1| 20S proteasome, A and B subunits [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946253|gb|ABR52189.1| 20S proteasome A and B subunits [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150374175|dbj|BAF67435.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156721709|dbj|BAF78126.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368228|gb|ABX29199.1| T01 family HslV component of HsIUV peptidase [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|253724282|gb|EES93011.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|253728563|gb|EES97292.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|257271764|gb|EEV03902.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274809|gb|EEV06296.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257278729|gb|EEV09348.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281454|gb|EEV11591.1| heat shock protein HslV [Staphylococcus aureus subsp. aureus E1410]
 gi|257284485|gb|EEV14605.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus M876]
 gi|257789663|gb|EEV28003.1| heat shock protein HslV [Staphylococcus aureus A9781]
 gi|257839251|gb|EEV63725.1| heat shock protein HslV [Staphylococcus aureus A9763]
 gi|257842363|gb|EEV66788.1| heat shock protein HslV [Staphylococcus aureus A9719]
 gi|257845935|gb|EEV69964.1| heat shock protein HslVU [Staphylococcus aureus A9635]
 gi|257849194|gb|EEV73176.1| heat shock protein HslV [Staphylococcus aureus A9299]
 gi|257850084|gb|EEV74037.1| heat shock protein HslVU [Staphylococcus aureus A8115]
 gi|257853767|gb|EEV76726.1| heat shock protein HslVU [Staphylococcus aureus A6300]
 gi|257857406|gb|EEV80304.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           A6224]
 gi|257859770|gb|EEV82612.1| heat shock protein HslV [Staphylococcus aureus A5948]
 gi|257863180|gb|EEV85944.1| heat shock protein HslV [Staphylococcus aureus A5937]
 gi|259160690|gb|EEW45711.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           930918-3]
 gi|259163713|gb|EEW48268.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           D30]
 gi|262075159|gb|ACY11132.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269940744|emb|CBI49126.1| putative ATP-dependent protease [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282314047|gb|EFB44439.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus subsp. aureus C101]
 gi|282316762|gb|EFB47136.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
           C427]
 gi|282319000|gb|EFB49352.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus subsp. aureus D139]
 gi|282322098|gb|EFB52422.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           aureus subsp. aureus M899]
 gi|282325430|gb|EFB55739.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327608|gb|EFB57891.1| heat shock protein HslVU [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330863|gb|EFB60377.1| ATP-dependent HslUV protease peptidase subunit HslV [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282590598|gb|EFB95675.1| ATP-dependent protease hslV [Staphylococcus aureus A10102]
 gi|282594159|gb|EFB99146.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus A9765]
 gi|282595426|gb|EFC00390.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           aureus subsp. aureus C160]
 gi|282764738|gb|EFC04863.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus A8117]
 gi|283460464|gb|EFC07554.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
           H19]
 gi|283470468|emb|CAQ49679.1| ATP-dependent protease HslV [Staphylococcus aureus subsp. aureus
           ST398]
 gi|285816935|gb|ADC37422.1| ATP-dependent protease HslV [Staphylococcus aureus 04-02981]
 gi|290920682|gb|EFD97745.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           aureus subsp. aureus M1015]
 gi|291096067|gb|EFE26328.1| ATP-dependent HslUV protease, peptidase subunit HslV
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466968|gb|EFF09486.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
           M809]
 gi|294825048|gb|EFG41470.1| ATP-dependent HslUV protease [Staphylococcus aureus A9754]
 gi|294968777|gb|EFG44799.1| ATP-dependent HslUV protease [Staphylococcus aureus A8819]
 gi|295128098|gb|EFG57732.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|296887344|gb|EFH26246.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297178447|gb|EFH37693.1| ATP-dependent protease hslV [Staphylococcus aureus A8796]
 gi|297576188|gb|EFH94904.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
           MN8]
 gi|298694545|gb|ADI97767.1| ATP-dependent protease heat shock protein [Staphylococcus aureus
           subsp. aureus ED133]
 gi|300886428|gb|EFK81630.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302332859|gb|ADL23052.1| T01 family HslV component of HsIUV peptidase [Staphylococcus aureus
           subsp. aureus JKD6159]
 gi|302751076|gb|ADL65253.1| T01 family HslV component of HsIUV peptidase [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304340166|gb|EFM06107.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|312438368|gb|ADQ77439.1| ATP-dependent protease HslVU [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|312829647|emb|CBX34489.1| ATP-dependent protease hslV [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315131046|gb|EFT87030.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus CGS03]
 gi|315194140|gb|EFU24533.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus CGS00]
 gi|315198493|gb|EFU28822.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320140930|gb|EFW32777.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           aureus subsp. aureus MRSA131]
 gi|320144354|gb|EFW36120.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           aureus subsp. aureus MRSA177]
 gi|329313923|gb|AEB88336.1| ATP-dependent protease subunit HslV [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727322|gb|EGG63778.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           aureus subsp. aureus 21172]
 gi|329727843|gb|EGG64294.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           aureus subsp. aureus 21189]
 gi|329733602|gb|EGG69930.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           aureus subsp. aureus 21193]
          Length = 181

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 135/176 (76%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6   LHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK   LV++G G+V+ P+
Sbjct: 66  FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + ++AIGSGG+YALSA RAL       SAEE+A +++ +AADICV+TN NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYESLKVAADICVFTNDNIVVETL 181


>gi|300692948|ref|YP_003753943.1| peptidase component of the HslUV protease [Ralstonia solanacearum
           PSI07]
 gi|299080008|emb|CBJ52683.1| peptidase component of the HslUV protease [Ralstonia solanacearum
           PSI07]
          Length = 178

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 98/176 (55%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVR +  G ++ GFAG++ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KL++Y   LLR++V+LAKDWR D+ LR+LEAM+++AD+  TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA SAA+AL  +T+ S  E+  K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALAENTELSPREVVEKSLRIAGELCIYTNTNFVIETLE 178


>gi|194333991|ref|YP_002015851.1| ATP-dependent protease peptidase subunit [Prosthecochloris
           aestuarii DSM 271]
 gi|238693333|sp|B4S817|HSLV_PROA2 RecName: Full=ATP-dependent protease subunit HslV
 gi|194311809|gb|ACF46204.1| 20S proteasome A and B subunits [Prosthecochloris aestuarii DSM
           271]
          Length = 182

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 94/182 (51%), Positives = 132/182 (72%), Gaps = 2/182 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M       ++ ATT+L V ++G   +  DGQ++LG TV+K + +K+RR+   N+I GFAG
Sbjct: 1   MNRSEKP-QLRATTVLGVIRNGKAALGSDGQMTLGNTVIKHSTKKIRRIQHANLITGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TLL+R ++KL+ +  QL RS+VELA+DWR DKYLR LEAM+ +      L+I+G
Sbjct: 60  ATADAVTLLDRFDEKLQAFGGQLERSAVELARDWRTDKYLRRLEAMLAVVSADKALIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+EPE+G++AIGSG  YALSAARAL+  T  SA EI  +++ IAADIC+YTN +IV+
Sbjct: 120 TGDVIEPEDGIVAIGSGSMYALSAARALIRYTDLSAREIVTESLKIAADICIYTNDHIVV 179

Query: 183 ET 184
           E 
Sbjct: 180 EE 181


>gi|69246762|ref|ZP_00604110.1| 20S proteasome, A and B subunits [Enterococcus faecium DO]
 gi|257878025|ref|ZP_05657678.1| 20S proteasome protein [Enterococcus faecium 1,230,933]
 gi|257881189|ref|ZP_05660842.1| 20S proteasome protein [Enterococcus faecium 1,231,502]
 gi|257884852|ref|ZP_05664505.1| 20S proteasome protein [Enterococcus faecium 1,231,501]
 gi|257889776|ref|ZP_05669429.1| 20S proteasome protein [Enterococcus faecium 1,231,410]
 gi|257892287|ref|ZP_05671940.1| 20S proteasome protein [Enterococcus faecium 1,231,408]
 gi|258616484|ref|ZP_05714254.1| ATP-dependent protease peptidase subunit [Enterococcus faecium DO]
 gi|260559075|ref|ZP_05831261.1| 20S proteasome protein [Enterococcus faecium C68]
 gi|261207609|ref|ZP_05922294.1| 20S proteasome protein [Enterococcus faecium TC 6]
 gi|289565121|ref|ZP_06445574.1| ATP-dependent protease hslV [Enterococcus faecium D344SRF]
 gi|293556769|ref|ZP_06675332.1| ATP-dependent protease HslV [Enterococcus faecium E1039]
 gi|293563427|ref|ZP_06677876.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium E1162]
 gi|293568160|ref|ZP_06679496.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium E1071]
 gi|294614816|ref|ZP_06694711.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium E1636]
 gi|294617495|ref|ZP_06697126.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium E1679]
 gi|294622308|ref|ZP_06701351.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium U0317]
 gi|314938037|ref|ZP_07845347.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133a04]
 gi|314941977|ref|ZP_07848838.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133C]
 gi|314948770|ref|ZP_07852142.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0082]
 gi|314951788|ref|ZP_07854827.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133A]
 gi|314991805|ref|ZP_07857263.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133B]
 gi|314995846|ref|ZP_07860933.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133a01]
 gi|68195116|gb|EAN09576.1| 20S proteasome, A and B subunits [Enterococcus faecium DO]
 gi|257812253|gb|EEV41011.1| 20S proteasome protein [Enterococcus faecium 1,230,933]
 gi|257816847|gb|EEV44175.1| 20S proteasome protein [Enterococcus faecium 1,231,502]
 gi|257820690|gb|EEV47838.1| 20S proteasome protein [Enterococcus faecium 1,231,501]
 gi|257826136|gb|EEV52762.1| 20S proteasome protein [Enterococcus faecium 1,231,410]
 gi|257828666|gb|EEV55273.1| 20S proteasome protein [Enterococcus faecium 1,231,408]
 gi|260074832|gb|EEW63148.1| 20S proteasome protein [Enterococcus faecium C68]
 gi|260077992|gb|EEW65698.1| 20S proteasome protein [Enterococcus faecium TC 6]
 gi|289163128|gb|EFD10975.1| ATP-dependent protease hslV [Enterococcus faecium D344SRF]
 gi|291589150|gb|EFF20962.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium E1071]
 gi|291592278|gb|EFF23892.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium E1636]
 gi|291596235|gb|EFF27497.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium E1679]
 gi|291598200|gb|EFF29298.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium U0317]
 gi|291601101|gb|EFF31390.1| ATP-dependent protease HslV [Enterococcus faecium E1039]
 gi|291604688|gb|EFF34173.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Enterococcus faecium E1162]
 gi|313589950|gb|EFR68795.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133a01]
 gi|313593616|gb|EFR72461.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133B]
 gi|313596067|gb|EFR74912.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133A]
 gi|313599229|gb|EFR78074.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133C]
 gi|313642612|gb|EFS07192.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0133a04]
 gi|313644836|gb|EFS09416.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecium TX0082]
          Length = 182

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 89/177 (50%), Positives = 131/177 (74%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            H+TTI  V KDG   +AGDGQV++G   VMK  A+KVRR+  G ++ GFAGS ADAFTL
Sbjct: 6   FHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNGEVVVGFAGSVADAFTL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ +    L+++G G+V+ P+
Sbjct: 66  EEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNDKEMLLVSGTGEVITPD 125

Query: 132 NGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG++AL+AARA+ +      SA+EIA  A++IAADIC++TNHNI++E L
Sbjct: 126 DGILAIGSGGNFALAAARAMKNYAQNDMSAKEIAENALNIAADICIFTNHNIIVEEL 182


>gi|332703814|ref|ZP_08423902.1| ATP-dependent protease hslV [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332553963|gb|EGJ51007.1| ATP-dependent protease hslV [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 178

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 106/178 (59%), Positives = 134/178 (75%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           MHATTIL V  D  V +AGDGQV+LGQ TVMK  ARKVRR+ K +I+ GFAGS+ADAFTL
Sbjct: 1   MHATTILAVLDDRGVAMAGDGQVTLGQQTVMKHTARKVRRIYKESILVGFAGSTADAFTL 60

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LER E KLEQ+   L R+SVELAK+WR DKYLR LEAM+L +D T  L+++G GDV+EP+
Sbjct: 61  LERFEAKLEQFKGNLPRASVELAKEWRTDKYLRRLEAMLLASDGTQILLLSGNGDVIEPD 120

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           +G+ AIGSGGSY   +A      T  +A EI  ++M+IAA+ICV+TN  +V+ET+  G
Sbjct: 121 DGMAAIGSGGSYALAAARALKRHTGMAAREICERSMAIAAEICVFTNDKLVVETIDKG 178


>gi|190575907|ref|YP_001973752.1| ATP-dependent protease peptidase subunit [Stenotrophomonas
           maltophilia K279a]
 gi|194367244|ref|YP_002029854.1| ATP-dependent protease peptidase subunit [Stenotrophomonas
           maltophilia R551-3]
 gi|254521094|ref|ZP_05133149.1| ATP-dependent protease HslV [Stenotrophomonas sp. SKA14]
 gi|229486364|sp|B2FUV7|HSLV_STRMK RecName: Full=ATP-dependent protease subunit HslV
 gi|238065942|sp|B4SJN0|HSLV_STRM5 RecName: Full=ATP-dependent protease subunit HslV
 gi|190013829|emb|CAQ47467.1| putative heat shock protein [Stenotrophomonas maltophilia K279a]
 gi|194350048|gb|ACF53171.1| 20S proteasome A and B subunits [Stenotrophomonas maltophilia
           R551-3]
 gi|219718685|gb|EED37210.1| ATP-dependent protease HslV [Stenotrophomonas sp. SKA14]
          Length = 183

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 110/184 (59%), Positives = 139/184 (75%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M         HATTI+ VR+   V IAGDGQV+LG TVMK NARKVRRLG  G ++AGFA
Sbjct: 1   MDPSQNPNVFHATTIVCVRRGEHVAIAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KLE++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 61  GAAADAFTLFELFEAKLEKH-GQLQRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSYALSAARALM  T+  A  IA +A+ IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALMAHTELDARTIASEAIGIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|56698691|ref|YP_169068.1| ATP-dependent protease peptidase subunit [Ruegeria pomeroyi DSS-3]
 gi|81558231|sp|Q5LLP2|HSLV_SILPO RecName: Full=ATP-dependent protease subunit HslV
 gi|56680428|gb|AAV97094.1| ATP-dependent protease hslV [Ruegeria pomeroyi DSS-3]
          Length = 185

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 120/184 (65%), Positives = 145/184 (78%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGF 61
           M D  +    H TTI+ V+K G VVIAGDGQVSLGQTV+K  ARKVRRL  G  +++AGF
Sbjct: 1   MADDQFP-GWHGTTIIGVKKGGEVVIAGDGQVSLGQTVIKGTARKVRRLSPGGYHVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM++++D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEATPGQLARASVELAKDWRTDKYLQKLEAMLIVSDGQDMFVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AARA+M +  SAEE+AR AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARAMMDSDKSAEEVARAAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +E +
Sbjct: 180 VEKI 183


>gi|82750854|ref|YP_416595.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           RF122]
 gi|123549065|sp|Q2YXL5|HSLV_STAAB RecName: Full=ATP-dependent protease subunit HslV
 gi|82656385|emb|CAI80804.1| ATP-dependent protease heat shock protein [Staphylococcus aureus
           RF122]
          Length = 181

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 135/176 (76%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6   LHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK   LV++G G+V+ P+
Sbjct: 66  FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + ++AIGSGG+YALSA RAL       SAEE+A +++ +AADICV+TN NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKHHASHLSAEEMAYESLKVAADICVFTNDNIVVETL 181


>gi|94500582|ref|ZP_01307113.1| ATP-dependent protease peptidase subunit [Oceanobacter sp. RED65]
 gi|94427372|gb|EAT12351.1| ATP-dependent protease peptidase subunit [Oceanobacter sp. RED65]
          Length = 175

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 95/174 (54%), Positives = 130/174 (74%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR++  VV+ GDGQVSLG TVMK NARKVR L  G +IAGFAG++ADAFTL E+ 
Sbjct: 2   TTILSVRREDEVVMGGDGQVSLGNTVMKGNARKVRTLYDGKVIAGFAGATADAFTLFEKF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E  L+++   L R++VE+AK+WR D+ LR LEA++ +ADK  +L+ITG GDVLEPE+ ++
Sbjct: 62  EGHLQKHGGHLTRAAVEMAKEWRSDRALRKLEAILAVADKDASLIITGNGDVLEPEDSLI 121

Query: 136 AIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           A+GSGG+    +A      T   A +I  K ++IAADICV+TNHN+ +E+LK+ 
Sbjct: 122 AVGSGGNYALAAAKALYHETDMGARDIVEKGLTIAADICVFTNHNLTIESLKIK 175


>gi|153005548|ref|YP_001379873.1| ATP-dependent protease peptidase subunit [Anaeromyxobacter sp.
           Fw109-5]
 gi|189043928|sp|A7HDU3|HSLV_ANADF RecName: Full=ATP-dependent protease subunit HslV
 gi|152029121|gb|ABS26889.1| 20S proteasome A and B subunits [Anaeromyxobacter sp. Fw109-5]
          Length = 181

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 97/178 (54%), Positives = 134/178 (75%), Gaps = 5/178 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT+L VR+DG VV+A DGQV+L +TVMK+ ARKVRRL +G ++AGFAG++ADAF L 
Sbjct: 4   FHGTTVLCVRRDGKVVMASDGQVTLDKTVMKSTARKVRRLAEGAVLAGFAGATADAFQLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE- 131
           E  EKKL+++   L R++VELAK WR D+ LR LEAM+++AD+   LV++G GDV+EP+ 
Sbjct: 64  ELFEKKLKEHARSLPRAAVELAKQWRTDRMLRRLEAMLVVADREHILVLSGAGDVIEPDP 123

Query: 132 ---NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
               GV+AIGSG  YA++AARAL+  +   A ++A +AM +AA+IC+YTN N+  E L
Sbjct: 124 VPGGGVVAIGSGAPYAVAAARALLGHSALPARQVAEEAMKLAAEICIYTNANLTFEEL 181


>gi|308173577|ref|YP_003920282.1| two-component ATP-dependent protease [Bacillus amyloliquefaciens
           DSM 7]
 gi|307606441|emb|CBI42812.1| two-component ATP-dependent protease (N-terminal serine protease)
           [Bacillus amyloliquefaciens DSM 7]
 gi|328553490|gb|AEB23982.1| ATP-dependent protease subunit HslV [Bacillus amyloliquefaciens
           TA208]
 gi|328911718|gb|AEB63314.1| two-component ATP-dependent protease (N-terminal serine protease)
           [Bacillus amyloliquefaciens LL3]
          Length = 181

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 99/179 (55%), Positives = 130/179 (72%), Gaps = 4/179 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             HATTI  V+  G   ++GDGQV+ GQ  VMK  ARKVR+L  G ++AGFAGS ADAFT
Sbjct: 3   SFHATTIFAVQHKGKSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KLE+Y   L R+SVELAK+WR DK LR LEAM+++ ++   L+++G G+V+EP
Sbjct: 63  LFEMFEAKLEEYNGNLKRASVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G+MAIGSGG+YALSA RAL +      SA++IA  A+ IA +ICVYTN  I+LE L+
Sbjct: 123 DDGIMAIGSGGNYALSAGRALKTYAGENLSAKDIAHAALKIAGEICVYTNDQIILEELE 181


>gi|323441031|gb|EGA98738.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           O11]
 gi|323443900|gb|EGB01511.1| ATP-dependent protease peptidase subunit [Staphylococcus aureus
           O46]
          Length = 181

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 136/176 (77%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6   LHATTIYAVRHNGKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK   LV++G G+V+ P+
Sbjct: 66  FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + ++AIGSGG+YALSA RAL       SAEE+A +++ +AADICV+TN+NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYESLKVAADICVFTNNNIVVETL 181


>gi|295698590|ref|YP_003603245.1| ATP-dependent protease HslV [Candidatus Riesia pediculicola USDA]
 gi|291157475|gb|ADD79920.1| ATP-dependent protease HslV [Candidatus Riesia pediculicola USDA]
          Length = 176

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 88/174 (50%), Positives = 129/174 (74%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VVI GDGQ ++G T++K N +K+RRL    +IAGFAG +ADAF L +  
Sbjct: 2   TTIISVRRSGSVVIGGDGQATMGNTIIKGNVKKIRRLYHERVIAGFAGGTADAFALFDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKK+E     L++++VEL K+WR D+ LR LEA++ +AD+T +L+ITG GDV++PE+ ++
Sbjct: 62  EKKIEICQGHLVKAAVELTKEWRTDRMLRRLEAILAVADRTNSLIITGNGDVIQPESSLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG Y  +AA+A++ +TQ SA +I  KA+ IA++IC+YTNHN   E +   
Sbjct: 122 AIGSGGPYGKAAAKAMLENTQMSARDITEKALKIASEICIYTNHNFNFEEISSN 175


>gi|315172225|gb|EFU16242.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX1346]
          Length = 194

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 90/178 (50%), Positives = 133/178 (74%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + H+TTI  V KDG   +AGDGQV++G   VMK  A+KVRR+    ++ GFAGS ADAFT
Sbjct: 17  QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ +K   L+++G G+V+ P
Sbjct: 77  LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136

Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG++ALSAARA+ +    +  A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 137 DDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 194


>gi|242373544|ref|ZP_04819118.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
           epidermidis M23864:W1]
 gi|242348907|gb|EES40509.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
           epidermidis M23864:W1]
          Length = 180

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 99/177 (55%), Positives = 136/177 (76%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL +G ++AGFAGS ADAFT
Sbjct: 4   SLHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ +K   LV++G G+V+ P
Sbjct: 64  LFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILVVSGTGEVIAP 123

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL     Q SA+E+A +++ +AADICV+TN NI++ETL
Sbjct: 124 DDDLIAIGSGGNYALSAGRALKRHASQLSAKEMAYESLKVAADICVFTNDNIIVETL 180


>gi|319892268|ref|YP_004149143.1| ATP-dependent protease HslV [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161964|gb|ADV05507.1| ATP-dependent protease HslV [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464635|gb|ADX76788.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           pseudintermedius ED99]
          Length = 180

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 94/177 (53%), Positives = 130/177 (73%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  VR +G   +AGDGQV+LG+  +MK  A+KVR+L  G +IAGFAGS ADAFT
Sbjct: 4   SIHATTIYAVRHNGGAAMAGDGQVTLGEKVIMKQTAKKVRKLYNGKVIAGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+QY   L R++VELAK+WR DK LR LEAM+++ DK   LV++G G+V+ P
Sbjct: 64  LFEKFEAKLQQYSGNLERAAVELAKEWRGDKQLRQLEAMLIVMDKEHILVVSGTGEVIAP 123

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG++ALSA RA        SA E+A +++ +A+DICV+TN +I +E L
Sbjct: 124 DDDLIAIGSGGNFALSAGRAFKRHASHLSAREMAYESLKVASDICVFTNDHITVEEL 180


>gi|255020690|ref|ZP_05292752.1| ATP-dependent protease HslV [Acidithiobacillus caldus ATCC 51756]
 gi|254969926|gb|EET27426.1| ATP-dependent protease HslV [Acidithiobacillus caldus ATCC 51756]
          Length = 180

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 105/180 (58%), Positives = 138/180 (76%), Gaps = 2/180 (1%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               + +H TTIL+VR+   VV+AGDGQV+ G TVMKANARKVRRL    ++ GFAG++A
Sbjct: 1   MSQNLDLHGTTILSVRRGQNVVMAGDGQVTFGNTVMKANARKVRRLEAD-VLVGFAGATA 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTLLER E KL+ +P QL +++VELAK+WR D+ LR LEAM+ +AD+  +L++TG GD
Sbjct: 60  DAFTLLERFEAKLKAHPGQLAKAAVELAKEWRTDRVLRRLEAMLAVADRQQSLILTGQGD 119

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEPE G++AIGSGG YAL+AARAL+  ++ SA  IA +A+ IAADIC+YTN    +E L
Sbjct: 120 VLEPEYGIIAIGSGGPYALAAARALLEHSELSARAIAERALVIAADICIYTNQQHSVEEL 179


>gi|317121810|ref|YP_004101813.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
           marianensis DSM 12885]
 gi|315591790|gb|ADU51086.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
           marianensis DSM 12885]
          Length = 182

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 91/180 (50%), Positives = 126/180 (70%), Gaps = 2/180 (1%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSA 66
              V+ H TT+L VR+DG V +AGDGQV++    VMK  ARKVRRL  G ++AGFAGS A
Sbjct: 3   QGPVRFHGTTVLAVRRDGKVAMAGDGQVTMEQHMVMKHRARKVRRLYHGRVLAGFAGSVA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DA  L+ER E KLE++  QL+R++VELAKDWR D+ LR LEA++++AD    L+++G G+
Sbjct: 63  DAVALMERFEAKLEEHAGQLVRAAVELAKDWRTDRLLRRLEAVMVVADADHVLLVSGSGE 122

Query: 127 VLEPENGVMAIGS-GGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEP++G++A+GS  G    +A      T   A  I R+AM IAA++CVYTN  +++E L
Sbjct: 123 VLEPDDGIVAVGSGAGFALAAARALARHTNLDAAAICREAMRIAAELCVYTNDQLIVEEL 182


>gi|27904994|ref|NP_778120.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           Bp (Baizongia pistaciae)]
 gi|29839275|sp|P59581|HSLV_BUCBP RecName: Full=ATP-dependent protease subunit HslV
 gi|27904392|gb|AAO27225.1| ATP-dependent protease HslV [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 176

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 95/174 (54%), Positives = 128/174 (73%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VR +  VVI GDGQ +LG T++K+N +KVR L    +IAGFAG +ADAFTL E  
Sbjct: 2   TTILSVRLNKQVVIGGDGQATLGNTIIKSNVKKVRTLYNNKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKL  Y  QL RS++ELAKDWR DK LR LEA++ +ADK  +L++TG GDV++PEN +M
Sbjct: 62  EKKLLMYQGQLQRSAIELAKDWRTDKILRKLEALLAVADKETSLIVTGNGDVIQPENNLM 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGGSYA +AA A++ +T  +A++I  KA+ I + IC+YTN+   ++ L   
Sbjct: 122 AIGSGGSYAQAAAIAMIENTSLTAKQIVEKALKITSGICIYTNNIFTIKELTSE 175


>gi|73539873|ref|YP_294393.1| ATP-dependent protease peptidase subunit [Ralstonia eutropha
           JMP134]
 gi|123626065|sp|Q476Y4|HSLV_RALEJ RecName: Full=ATP-dependent protease subunit HslV
 gi|72117286|gb|AAZ59549.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Ralstonia eutropha JMP134]
          Length = 178

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+  G ++ GFAGS+ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE+Y   L R++V+LAKDWR D+ LR LEAM++ AD+  TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRETTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA SAA+AL+ +T+ +  ++  KA++IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALVENTELAPRDVVEKALTIAGELCIYTNTNFVIETLE 178


>gi|332686605|ref|YP_004456379.1| ATP-dependent protease HslV [Melissococcus plutonius ATCC 35311]
 gi|332370614|dbj|BAK21570.1| ATP-dependent protease HslV [Melissococcus plutonius ATCC 35311]
          Length = 182

 Score =  165 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 90/178 (50%), Positives = 138/178 (77%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + H+TTI  + KDG   +AGDGQV++GQ+V MK +A+KVRR+    ++ GFAGS ADAFT
Sbjct: 5   QFHSTTICAIEKDGKFAMAGDGQVTMGQSVVMKGSAKKVRRIYNNEVVVGFAGSVADAFT 64

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ +K   L+++G G+V++P
Sbjct: 65  LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVIQP 124

Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG++AL+AARA+ +    + SA+EIA+ A+SIAADICV+TNHNI++E +
Sbjct: 125 DDGILAIGSGGNFALAAARAMKNYGDKEISAKEIAKNALSIAADICVFTNHNIIVEEI 182


>gi|171060507|ref|YP_001792856.1| ATP-dependent protease peptidase subunit [Leptothrix cholodnii
           SP-6]
 gi|238065881|sp|B1Y6R3|HSLV_LEPCP RecName: Full=ATP-dependent protease subunit HslV
 gi|170777952|gb|ACB36091.1| 20S proteasome A and B subunits [Leptothrix cholodnii SP-6]
          Length = 178

 Score =  165 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 96/176 (54%), Positives = 137/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             H TTIL+VR+   V + GDGQV+LG  V+KA+ARKVRRL +  ++AGFAG++ADAFTL
Sbjct: 3   SFHGTTILSVRRGEQVAMGGDGQVTLGHIVVKASARKVRRLYREQVLAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+R++VEL +DWR D+ LR LEAM+ +AD++ +L+ITG GDVLEPE
Sbjct: 63  FERFESKLEKHQGHLVRAAVELTRDWRTDRVLRRLEAMLAVADRSASLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G++AIGSGG+YA +AARA++  T+ S  +I ++++ IA D+C+YTN +  +ETL+
Sbjct: 123 YGIVAIGSGGAYAQAAARAMLQHTEQSPADIVKRSLEIAGDLCIYTNQSHTIETLE 178


>gi|56707808|ref|YP_169704.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110670279|ref|YP_666836.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. tularensis FSC198]
 gi|54113081|gb|AAV29174.1| NT02FT1012 [synthetic construct]
 gi|56604300|emb|CAG45321.1| ATP-dependent protease, proteasome-related peptidase subunit
           [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110320612|emb|CAL08704.1| ATP-dependent protease, proteasome-related peptidase subunit
           [Francisella tularensis subsp. tularensis FSC198]
 gi|282158982|gb|ADA78373.1| ATP-dependent protease peptidase subunit [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 183

 Score =  165 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 93/176 (52%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TTIL VRK   VVI GDGQ +LG T+ K N  KVR+L  G ++ GFAGS+ADAFTL 
Sbjct: 4   IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL-EPE 131
           E+ E+KLE Y   L R++VE+ ++WR+D+ L  LEAMI++A++ ++L+I+G GDV+   +
Sbjct: 64  EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVANEKLSLLISGAGDVMAADK 123

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           N +++IGSG +YA SAA AL+ +T  SAEEI RK+++IAAD C+YTNHN  +E+L+
Sbjct: 124 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 179


>gi|227518832|ref|ZP_03948881.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           TX0104]
 gi|227553449|ref|ZP_03983498.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           HH22]
 gi|229545743|ref|ZP_04434468.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           TX1322]
 gi|229549932|ref|ZP_04438657.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           ATCC 29200]
 gi|293382914|ref|ZP_06628832.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis R712]
 gi|293389597|ref|ZP_06634054.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis S613]
 gi|307270939|ref|ZP_07552222.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX4248]
 gi|307273144|ref|ZP_07554390.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0855]
 gi|307274879|ref|ZP_07556042.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX2134]
 gi|307277986|ref|ZP_07559070.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0860]
 gi|307289186|ref|ZP_07569142.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0109]
 gi|307291917|ref|ZP_07571786.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0411]
 gi|312899494|ref|ZP_07758824.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0470]
 gi|312903387|ref|ZP_07762567.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0635]
 gi|312907616|ref|ZP_07766607.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis DAPTO 512]
 gi|312910233|ref|ZP_07769080.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis DAPTO 516]
 gi|312951577|ref|ZP_07770473.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0102]
 gi|227073745|gb|EEI11708.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           TX0104]
 gi|227177425|gb|EEI58397.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           HH22]
 gi|229304945|gb|EEN70941.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           ATCC 29200]
 gi|229309193|gb|EEN75180.1| ATP-dependent protease peptidase subunit [Enterococcus faecalis
           TX1322]
 gi|291079579|gb|EFE16943.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis R712]
 gi|291081214|gb|EFE18177.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis S613]
 gi|306496915|gb|EFM66463.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0411]
 gi|306499895|gb|EFM69256.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0109]
 gi|306505383|gb|EFM74569.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0860]
 gi|306508327|gb|EFM77434.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX2134]
 gi|306510129|gb|EFM79153.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0855]
 gi|306512437|gb|EFM81086.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX4248]
 gi|310626644|gb|EFQ09927.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis DAPTO 512]
 gi|310630543|gb|EFQ13826.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0102]
 gi|310633263|gb|EFQ16546.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0635]
 gi|311289506|gb|EFQ68062.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis DAPTO 516]
 gi|311293364|gb|EFQ71920.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0470]
 gi|315029304|gb|EFT41236.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX4000]
 gi|315034050|gb|EFT45982.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0017]
 gi|315037058|gb|EFT48990.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0027]
 gi|315145126|gb|EFT89142.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX2141]
 gi|315147343|gb|EFT91359.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX4244]
 gi|315150457|gb|EFT94473.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0012]
 gi|315152401|gb|EFT96417.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0031]
 gi|315155673|gb|EFT99689.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0043]
 gi|315160540|gb|EFU04557.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0645]
 gi|315164095|gb|EFU08112.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX1302]
 gi|315168955|gb|EFU12972.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX1341]
 gi|315169811|gb|EFU13828.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX1342]
 gi|315575785|gb|EFU87976.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0309B]
 gi|315577627|gb|EFU89818.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0630]
 gi|315580437|gb|EFU92628.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0309A]
 gi|327535212|gb|AEA94046.1| ATP-dependent protease HslVU [Enterococcus faecalis OG1RF]
 gi|329571617|gb|EGG53298.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX1467]
          Length = 194

 Score =  165 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 90/178 (50%), Positives = 133/178 (74%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + H+TTI  V KDG   +AGDGQV++G   VMK  A+KVRR+    ++ GFAGS ADAFT
Sbjct: 17  QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ +K   L+++G G+V+ P
Sbjct: 77  LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136

Query: 131 ENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG++ALSAARA+ +    +  A+EIA+ A++IAADICV+TNHNI++E L
Sbjct: 137 DDGILAIGSGGNFALSAARAMKNFGDKEMPAKEIAKNALNIAADICVFTNHNIIVEEL 194


>gi|88606825|ref|YP_505626.1| ATP-dependent protease peptidase subunit [Anaplasma phagocytophilum
           HZ]
 gi|123494508|sp|Q2GJ25|HSLV_ANAPZ RecName: Full=ATP-dependent protease subunit HslV
 gi|88597888|gb|ABD43358.1| ATP-dependent protease HslV [Anaplasma phagocytophilum HZ]
          Length = 189

 Score =  165 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 106/188 (56%), Positives = 143/188 (76%), Gaps = 6/188 (3%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            D     KM+ TTIL++R+   V++AGDGQV+LG T+MK +ARK++RL    +I GFAG+
Sbjct: 1   MDHTDDRKMYGTTILSIRRGNSVIVAGDGQVTLGSTIMKTSARKIKRLASNTVITGFAGA 60

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++LVI+G 
Sbjct: 61  TADAFTLFERLEGKLEKHPGQLMRACVELAKDWRQDKYLRRLEAMMIVADKSVSLVISGG 120

Query: 125 GDVLEPENGVMAIGSGGS------YALSAARALMSTQNSAEEIARKAMSIAADICVYTNH 178
           GDVLEPENG+ AIGSGG+       AL AA+   +     E I  K+M+IAA+IC+YTN+
Sbjct: 121 GDVLEPENGIAAIGSGGNLALAAARALCAAQDEFAPAMPLEYIVAKSMAIAAEICIYTNN 180

Query: 179 NIVLETLK 186
           NIV+E ++
Sbjct: 181 NIVMEKIE 188


>gi|78186792|ref|YP_374835.1| ATP-dependent protease peptidase subunit [Chlorobium luteolum DSM
           273]
 gi|123583124|sp|Q3B4D9|HSLV_PELLD RecName: Full=ATP-dependent protease subunit HslV
 gi|78166694|gb|ABB23792.1| heat shock protein HslV [Chlorobium luteolum DSM 273]
          Length = 182

 Score =  165 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 94/182 (51%), Positives = 134/182 (73%), Gaps = 2/182 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M      V + +TT++ V +DG   +  DGQ++LG TV+K + RK+R L +G ++AGFAG
Sbjct: 1   MKHPKRPV-IRSTTVIGVLRDGKAALGSDGQMTLGNTVVKHSTRKIRSLYQGRLLAGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TLL+R E+KLE Y  +L R++VELA+DWR DKYLR LEAM+ I      L+I+G
Sbjct: 60  ATADAITLLDRFEEKLEAYNGKLERAAVELARDWRTDKYLRRLEAMLAIVSSERALIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+EPE+G++AIGSG  YAL+AAR+LM  T  SA +I R+++  AA+IC+YTN++IV+
Sbjct: 120 TGDVIEPEDGIVAIGSGSMYALAAARSLMKHTGLSARDIVRESLETAAEICIYTNNHIVV 179

Query: 183 ET 184
           E 
Sbjct: 180 EE 181


>gi|188590937|ref|YP_001795537.1| ATP-dependent protease peptidase subunit [Cupriavidus taiwanensis
           LMG 19424]
 gi|238065852|sp|B2AGB6|HSLV_CUPTR RecName: Full=ATP-dependent protease subunit HslV
 gi|170937831|emb|CAP62815.1| peptidase component of the HslUV protease [Cupriavidus taiwanensis
           LMG 19424]
          Length = 178

 Score =  165 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 137/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+  G ++ GFAGS+ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE+Y   L R++V+LAKDWR D+ LR LEAM++ AD+  TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRDTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA SAA+ALM +T+ + +++  KA++IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALMENTEMAPKDVVEKALTIAGELCIYTNTNFVIETLE 178


>gi|317129215|ref|YP_004095497.1| 20S proteasome A and subunit betas [Bacillus cellulosilyticus DSM
           2522]
 gi|315474163|gb|ADU30766.1| 20S proteasome A and B subunits [Bacillus cellulosilyticus DSM
           2522]
          Length = 180

 Score =  165 bits (417), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 90/177 (50%), Positives = 129/177 (72%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++  TTI  V+  G   +AGDGQV+ G   VMK  A+KVR++ +G ++AGFAGS ADAFT
Sbjct: 3   QIRGTTIFAVKHQGKCAMAGDGQVTFGNAVVMKHTAKKVRKIYRGKVVAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E+KLE++   L R++VE+AKDWR D+ LR LEAM+++ D++   +I G G+V+EP
Sbjct: 63  LFEKFEQKLEEFSGNLQRAAVEMAKDWRSDRVLRKLEAMLIVMDESNLYLIAGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG YAL+A R+L   +   +A+EIA  A+  AADICVYTN  I++E L
Sbjct: 123 DDGILAIGSGGHYALAAGRSLKEYAQHLTAKEIAYAALKTAADICVYTNSEIIVEEL 179


>gi|320535375|ref|ZP_08035489.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
           phagedenis F0421]
 gi|320147777|gb|EFW39279.1| ATP-dependent protease HslVU, peptidase subunit [Treponema
           phagedenis F0421]
          Length = 193

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 95/175 (54%), Positives = 133/175 (76%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TT++ VRK+G + +AGDGQV++G TVMK NARKVR++  G II GFAG++ADAFTL
Sbjct: 19  KVRSTTVIAVRKNGKIAMAGDGQVTMGNTVMKGNARKVRKIYDGKIITGFAGATADAFTL 78

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LE+ + KL+ Y   L R++VELAK+WR DK L+NLEA++L+ADK   L+I+G GD++EP+
Sbjct: 79  LEKFDGKLKTYNGDLTRAAVELAKEWRTDKMLKNLEALLLVADKDTILLISGNGDIIEPQ 138

Query: 132 NGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
              +AIGSGG+    +A   L +T+ +A+EIA K++ IA  IC+YTNH I LE L
Sbjct: 139 EDTIAIGSGGNYAYAAALALLRNTELTAKEIAEKSLEIAGQICIYTNHTIQLEEL 193


>gi|146329277|ref|YP_001210212.1| ATP-dependent protease peptidase subunit [Dichelobacter nodosus
           VCS1703A]
 gi|189028446|sp|A5EX24|HSLV_DICNV RecName: Full=ATP-dependent protease subunit HslV
 gi|146232747|gb|ABQ13725.1| heat shock protein HslVU, protease HslV [Dichelobacter nodosus
           VCS1703A]
          Length = 180

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 101/174 (58%), Positives = 132/174 (75%), Gaps = 1/174 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H+TTIL+VR+   V IAGDGQVSLGQT+MK NARK+RRL    I+AGFAG++ADAFTL E
Sbjct: 5   HSTTILSVRRGNHVAIAGDGQVSLGQTIMKGNARKIRRLYHDQILAGFAGATADAFTLFE 64

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
             E KLE    QLLR++VE+AK+WR D+ LR LEAM+++AD+  TL+++G GD++EPEN 
Sbjct: 65  LFEGKLEAQDGQLLRAAVEMAKEWRTDRSLRRLEAMLIVADRNNTLILSGNGDIVEPENS 124

Query: 134 VMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           + AIGSGG     +A     +T+  A  IA K+++IAADIC+YTNHNIV + LK
Sbjct: 125 LAAIGSGGMYALAAARALYHNTEMDALSIAEKSLNIAADICIYTNHNIVSDELK 178


>gi|310778331|ref|YP_003966664.1| ATP dependent peptidase CodWX, CodW component [Ilyobacter
           polytropus DSM 2926]
 gi|309747654|gb|ADO82316.1| ATP dependent peptidase CodWX, CodW component [Ilyobacter
           polytropus DSM 2926]
          Length = 177

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 93/175 (53%), Positives = 133/175 (76%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K  ATTI+ V+KD  V IAGDGQV+ G TV K+ A+K+R++    I+ GFAGS+ADAF L
Sbjct: 3   KFRATTIIAVKKDNKVAIAGDGQVTFGDTVFKSGAKKIRKMYDNTILMGFAGSAADAFAL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ++ E KL+++   L ++SVELAK+WR DK LR LEAM+++ADK+  L+++G GDV+EP+
Sbjct: 63  FDKFEGKLDEFGGNLKKASVELAKEWRHDKALRVLEAMLVVADKSNVLIVSGNGDVIEPD 122

Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G+ AIGSGGSYA +AA+AL M +   A ++A +A+ IA ++C+YTN NI +ETL
Sbjct: 123 DGIAAIGSGGSYAYAAAKALVMHSDLGAPQVAEEALKIAGNMCIYTNLNISVETL 177


>gi|113866230|ref|YP_724719.1| ATP-dependent protease peptidase subunit [Ralstonia eutropha H16]
 gi|123134531|sp|Q0KF70|HSLV_RALEH RecName: Full=ATP-dependent protease subunit HslV
 gi|113525006|emb|CAJ91351.1| ATP-dependent protease HslVU, peptidase subunit [Ralstonia eutropha
           H16]
          Length = 178

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVRR+  G ++ GFAGS+ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRRIYNGKVLVGFAGSTADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KLE+Y   L R++V+LAKDWR D+ LR LEAM++ AD+  TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLEKYQGNLTRAAVDLAKDWRSDRALRRLEAMLITADRDTTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA SAA+AL  +T+ + +++  KA++IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALAENTEMAPKDVVEKALTIAGELCIYTNTNFVIETLE 178


>gi|114762243|ref|ZP_01441711.1| ATP-dependent protease peptidase subunit [Pelagibaca bermudensis
           HTCC2601]
 gi|114545267|gb|EAU48270.1| ATP-dependent protease peptidase subunit [Roseovarius sp. HTCC2601]
          Length = 185

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 117/184 (63%), Positives = 146/184 (79%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M D+ +    H TTI+ VRK G VV+AGDGQVSLGQTV+K +ARKVRRL  G  +++ GF
Sbjct: 1   MADQEFP-GWHGTTIIGVRKGGQVVVAGDGQVSLGQTVIKGSARKVRRLSPGGSDVVCGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAF LLERLE KLE+ P QL R+ VELAKDWR DKYL+ LEAM+++ D     VI
Sbjct: 60  AGSTADAFALLERLEAKLEKTPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGRELYVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ + AIGSGG++AL+AAR +M ++ SAEEIAR+AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDIAAIGSGGNFALAAARGMMDSERSAEEIARRAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +ET+
Sbjct: 180 VETI 183


>gi|332976817|gb|EGK13645.1| ATP-dependent protease HslVU [Desmospora sp. 8437]
          Length = 176

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 97/175 (55%), Positives = 132/175 (75%), Gaps = 3/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           MHATTI  +  +G   IAGDGQV+ G   VMK  A+KVRRL +G ++AGFAGS ADA TL
Sbjct: 1   MHATTIFAIHHNGSGAIAGDGQVTFGNQMVMKHQAKKVRRLYRGQVVAGFAGSVADAVTL 60

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E +LE++   L R++VELAK+WR DK LR LEAM+++ D+   L+++G G+V+EP+
Sbjct: 61  FEKFEGRLEEFHGNLPRAAVELAKEWRADKVLRRLEAMLVVMDREHLLLVSGNGEVIEPD 120

Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           +G+MAIGSGGSYALSA RAL   ++  +A EIA+ A++IA++ICV+TN  IVLE 
Sbjct: 121 DGMMAIGSGGSYALSAGRALSRYASDLTAREIAKAALTIASEICVFTNDQIVLEE 175


>gi|222151086|ref|YP_002560240.1| heat shock protein HslV [Macrococcus caseolyticus JCSC5402]
 gi|254802417|sp|B9EBD3|HSLV_MACCJ RecName: Full=ATP-dependent protease subunit HslV
 gi|222120209|dbj|BAH17544.1| heat shock protein HslV [Macrococcus caseolyticus JCSC5402]
          Length = 180

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 95/177 (53%), Positives = 131/177 (74%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++HATTI  +R +G   ++GDGQV+LGQ  +MK  ARKVRRL    ++AGFAGS ADAFT
Sbjct: 4   QLHATTIFAIRHNGRAAMSGDGQVTLGQQVIMKQTARKVRRLFNDEVVAGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KL +Y   L R++VELAK+WR DK LR LEAM+++ +K   LV++G G+V++P
Sbjct: 64  LFEMFEAKLYEYNGNLSRAAVELAKEWRGDKMLRQLEAMLIVMNKDELLVVSGTGEVIQP 123

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL       SA +IA+ ++  AADICV+TNHNI++E +
Sbjct: 124 DDDIIAIGSGGNYALSAGRALKRHASTLSARDIAQASLETAADICVFTNHNIIIEEI 180


>gi|269958526|ref|YP_003328313.1| ATP-dependent protease peptidase subunit [Anaplasma centrale str.
           Israel]
 gi|269848355|gb|ACZ48999.1| ATP-dependent protease peptidase subunit [Anaplasma centrale str.
           Israel]
          Length = 189

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 108/183 (59%), Positives = 144/183 (78%), Gaps = 6/183 (3%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
               M+ TTIL +R+   VVIAGDGQVS+G  +MK +ARK++RL    +I GFAG++ADA
Sbjct: 5   DGYTMYGTTILCIRRGDSVVIAGDGQVSMGSAIMKTSARKIKRLAGDTVITGFAGATADA 64

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           FTL ERLE KLE++P QL+R+ VELAKDWR DKYLR LEAM+++ADK+++L+I+G GDVL
Sbjct: 65  FTLFERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLIISGGGDVL 124

Query: 129 EPENGVMAIGSGGSYALSAARAL------MSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
           EPENG+ AIGSGG++ALSAARAL      +S   + E IA  AM++A++ICVYTN+NI++
Sbjct: 125 EPENGIAAIGSGGNFALSAARALCTARDELSLDMTLEYIATAAMAVASEICVYTNNNIIM 184

Query: 183 ETL 185
           E +
Sbjct: 185 EKI 187


>gi|260428765|ref|ZP_05782742.1| ATP-dependent protease HslV [Citreicella sp. SE45]
 gi|260419388|gb|EEX12641.1| ATP-dependent protease HslV [Citreicella sp. SE45]
          Length = 185

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 118/184 (64%), Positives = 146/184 (79%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M D+ +    H TTI+ VRK G VV+AGDGQVSLGQTV+K  ARKVRRL  G  +++ GF
Sbjct: 1   MADQEFP-GWHGTTIIGVRKGGQVVVAGDGQVSLGQTVIKGTARKVRRLSPGGSDVVCGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAF LLERLE KLE+ P QL R+ VELAKDWR DKYL+ LEAM+++ D     VI
Sbjct: 60  AGSTADAFALLERLEAKLEKTPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGRELYVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AARA+M ++ SAE+IAR+AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVAAIGSGGNFALAAARAMMDSERSAEDIARRAMAIAADICVYTNGNLT 179

Query: 182 LETL 185
           +ET+
Sbjct: 180 VETI 183


>gi|311747699|ref|ZP_07721484.1| heat shock protein HslVU, ATPase subunit HslV [Algoriphagus sp.
           PR1]
 gi|126575687|gb|EAZ79997.1| heat shock protein HslVU, ATPase subunit HslV [Algoriphagus sp.
           PR1]
          Length = 179

 Score =  164 bits (416), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 90/175 (51%), Positives = 131/175 (74%), Gaps = 2/175 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ +TT++ +R +G VVI  DGQ +LG TV K+  +K+R L  G I+ GFAGS+ADAFTL
Sbjct: 3   RIKSTTVVAIRHNGEVVIGADGQATLGNTVAKSTVKKLRVLQGGKIVTGFAGSTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LE+ E+KL  + N + R++VELAK+WR D+ L  LEAM+++AD+   L+I+G GDV+EP+
Sbjct: 63  LEKFEEKLGAFGNNMKRAAVELAKEWRTDRMLSKLEAMMIVADQDDILIISGTGDVIEPD 122

Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
             +  IGSG  YA SAARA+   + Q SAEE+ R++++IAAD+C+YTNHN+V+E 
Sbjct: 123 MEIATIGSGSMYAQSAARAMKQFAPQMSAEEMVRESLNIAADVCIYTNHNLVIEK 177


>gi|488725|emb|CAA83919.1| heat shock protein [Bacillus subtilis]
          Length = 177

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 94/176 (53%), Positives = 127/176 (72%), Gaps = 4/176 (2%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ATTI  V+  G   ++GDGQV+ GQ  VMK  ARKVR+L  G ++AGFAGS AD FTL E
Sbjct: 2   ATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADRFTLFE 61

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           + E KL++Y   L R++VELAK+WR DK LR LEAM+++ ++   L+++G G+V+EP++G
Sbjct: 62  KFEAKLKEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPDDG 121

Query: 134 VMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++AIGSGG+YAL+A RAL        SA EIAR A+  A +ICVYTN  I+LE L+
Sbjct: 122 ILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE 177


>gi|315924467|ref|ZP_07920689.1| heat shock protein HslVU [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622346|gb|EFV02305.1| heat shock protein HslVU [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 180

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 91/178 (51%), Positives = 126/178 (70%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + ATTI+ +R +G V IAGDGQV++G+  +MKA A+KVR L  G ++AGFAGS ADAFTL
Sbjct: 2   LKATTIVGIRHNGEVAIAGDGQVTMGEAVIMKATAKKVRTLYNGKVLAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE Y   L R++VELAKDWR DK +R LEA++++ D    L+I+G G+V+EP+
Sbjct: 62  CELFEHKLETYNGNLKRAAVELAKDWRQDKIMRKLEALLIVMDADTLLIISGTGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           + + AIGSGG+Y   +A      +  SA++IA +A+ IA+ ICVYTN NI + TL+  
Sbjct: 122 DEIAAIGSGGNYALAAARALKAHSDLSAKKIAHEALKIASQICVYTNDNIRVLTLEDE 179


>gi|70726662|ref|YP_253576.1| ATP-dependent protease peptidase subunit [Staphylococcus
           haemolyticus JCSC1435]
 gi|123660048|sp|Q4L5V5|HSLV_STAHJ RecName: Full=ATP-dependent protease subunit HslV
 gi|68447386|dbj|BAE04970.1| heat shock protein HslV [Staphylococcus haemolyticus JCSC1435]
          Length = 181

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 99/177 (55%), Positives = 136/177 (76%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  VR +G   +AGDGQV+LG Q +MK  ARKVRRL +G ++AGFAGS ADAFT
Sbjct: 5   SLHATTIYAVRHNGEAAMAGDGQVTLGEQVIMKQTARKVRRLYEGKVLAGFAGSVADAFT 64

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK   LV++G G+V+ P
Sbjct: 65  LFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAP 124

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL     Q SA+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 125 DDDLIAIGSGGNYALSAGRALKRHASQLSAKEMAYESLKVASDICVFTNDNIIVETL 181


>gi|242242535|ref|ZP_04796980.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
           epidermidis W23144]
 gi|242233962|gb|EES36274.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
           epidermidis W23144]
 gi|319401457|gb|EFV89667.1| ATP-dependent protease hslV [Staphylococcus epidermidis FRI909]
          Length = 180

 Score =  164 bits (415), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 136/177 (76%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL +G ++AGFAGS ADAFT
Sbjct: 4   SLHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK   L+++G G+V+ P
Sbjct: 64  LFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILIVSGTGEVIAP 123

Query: 131 ENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL    TQ SA E+A +++ +AADICV+TN NI++ETL
Sbjct: 124 DDDLIAIGSGGNYALSAGRALKRHATQLSASEMAYESLKVAADICVFTNDNIIVETL 180


>gi|288550547|ref|ZP_05970868.2| hypothetical protein ENTCAN_09613 [Enterobacter cancerogenus ATCC
           35316]
 gi|288314762|gb|EFC53700.1| ATP-dependent protease HslVU, peptidase subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 164

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 94/159 (59%), Positives = 123/159 (77%), Gaps = 1/159 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 2   VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62  KAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVIQPENDLIAIGSGGPYAQAA 121

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ARAL+ +T  +A +IA KA+ IA DIC+YTNHN  +E L
Sbjct: 122 ARALLENTDMNARDIAVKALDIAGDICIYTNHNHTIEEL 160


>gi|163784237|ref|ZP_02179160.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880490|gb|EDP74071.1| ATP-dependent protease peptidase subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 162

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 90/160 (56%), Positives = 121/160 (75%), Gaps = 1/160 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VIAGDGQV+LG +VMKA A+K+R+L  G +I GFAGS+AD   L+ERLE+KL +Y   LL
Sbjct: 3   VIAGDGQVTLGNSVMKATAKKIRKLNDGKVIVGFAGSAADGLALMERLEEKLNKYGGNLL 62

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           R+SVELAK+WRMDK+LR LEA+++ ADK   L+I+G GDV++P+  ++A GSGG +A SA
Sbjct: 63  RASVELAKEWRMDKFLRRLEAVLIAADKEHMLLISGNGDVIQPDEPILATGSGGDFARSA 122

Query: 148 ARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           A AL   T   A +I  +AM IA +IC+YTN NI +E ++
Sbjct: 123 ALALYRNTDLDARKIVEEAMKIAGEICIYTNQNITIEEIQ 162


>gi|77920005|ref|YP_357820.1| ATP-dependent protease peptidase subunit [Pelobacter carbinolicus
           DSM 2380]
 gi|123573598|sp|Q3A1V7|HSLV_PELCD RecName: Full=ATP-dependent protease subunit HslV
 gi|77546088|gb|ABA89650.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Pelobacter carbinolicus DSM 2380]
          Length = 177

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 90/176 (51%), Positives = 128/176 (72%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + +  TTI+ VR  G V +AGDGQV+LG TVMK  ARK+RR+ +G I+AGFAGS+ADAFT
Sbjct: 1   MDIRGTTIICVRHQGQVTMAGDGQVTLGNTVMKHGARKIRRMYEGRILAGFAGSTADAFT 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E K++++   L +++V LAKDWR D+ LR LEA++++AD   TLV++G GDV+EP
Sbjct: 61  LFEKFEAKVQEFHGNLPKAAVALAKDWRTDQILRKLEALLIVADTNTTLVLSGAGDVIEP 120

Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G+ AIGSGGSY   +A          +E+IA +A+ IA +IC+YTN +I  E+L
Sbjct: 121 DDGIAAIGSGGSYALAAARALTRHAGLPSEQIATEALRIAGEICIYTNDHISSESL 176


>gi|317484380|ref|ZP_07943299.1| proteasome A-type and B-type [Bilophila wadsworthia 3_1_6]
 gi|316924388|gb|EFV45555.1| proteasome A-type and B-type [Bilophila wadsworthia 3_1_6]
          Length = 177

 Score =  164 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 136/177 (76%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++  TTIL VR  G V + GDGQV++GQ++ MK  A+KVRR+ K  I+AGFAG++ADAF
Sbjct: 1   MELRGTTILAVRHKGHVALIGDGQVTMGQSIVMKHTAKKVRRMYKDQIVAGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER +  LEQ    L+R++VELAKDWR DK+LR LEAM+L+AD+  TLV+TG GDV+E
Sbjct: 61  TLFERFDAHLEQTGGNLIRAAVELAKDWRSDKFLRKLEAMLLVADRDHTLVLTGTGDVIE 120

Query: 130 PENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P++G+ +IGSGG YALSAARAL   +   AE+IA ++M IA+++CV+TN +  LE L
Sbjct: 121 PDDGIASIGSGGPYALSAARALVRHSDLGAEDIALESMKIASELCVFTNGHYTLEVL 177


>gi|159469063|ref|XP_001692687.1| peptidase subunit of mitochondrial ATP-dependent protease hslUV
           [Chlamydomonas reinhardtii]
 gi|158277940|gb|EDP03706.1| peptidase subunit of mitochondrial ATP-dependent protease hslUV
           [Chlamydomonas reinhardtii]
          Length = 248

 Score =  164 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 106/175 (60%), Positives = 138/175 (78%), Gaps = 2/175 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H+TTIL VRKD +VV+ GDGQVS+G   +K N RKVRR+G+G ++AGFAGS+AD  +L
Sbjct: 51  ETHSTTILCVRKDDMVVMIGDGQVSVGSVSVKPNVRKVRRIGEG-VVAGFAGSAADGLSL 109

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LERLE KLE++P QLLR++VELAK WR DK LR L+A +L+AD + TL I+G GDVLEP 
Sbjct: 110 LERLEMKLEEHPGQLLRAAVELAKQWRQDKALRFLQAELLVADASTTLTISGNGDVLEPH 169

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +GVMAIGSGG++AL+AARALM   +  A  I  K+M IAAD+C+YTN N  +E++
Sbjct: 170 DGVMAIGSGGNFALAAARALMDVPEMDAMTIGTKSMKIAADMCIYTNDNFTIESI 224


>gi|83950790|ref|ZP_00959523.1| ATP-dependent protease peptidase subunit [Roseovarius nubinhibens
           ISM]
 gi|83838689|gb|EAP77985.1| ATP-dependent protease peptidase subunit [Roseovarius nubinhibens
           ISM]
          Length = 185

 Score =  164 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 120/186 (64%), Positives = 146/186 (78%), Gaps = 3/186 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGF 61
           M  + +    H TTI+ VRK G VVIAGDGQVSLGQTV+K +ARKVRRL  G  +++AGF
Sbjct: 1   MQREEFP-GWHGTTIIGVRKGGEVVIAGDGQVSLGQTVIKGSARKVRRLSPGGFDVVAGF 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
           AGS+ADAFTLLERLE KLE  P QL R+SVELAKDWR DKYL+ LEAM+++ D     VI
Sbjct: 60  AGSTADAFTLLERLEAKLEASPGQLQRASVELAKDWRTDKYLQKLEAMLIVTDGQDLYVI 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           TG GDVLEPE+ V AIGSGG++AL+AARA+M +  SAEE+AR AM+IAADICVYTN N+ 
Sbjct: 120 TGAGDVLEPEHDVTAIGSGGNFALAAARAMMDSDKSAEEVARAAMAIAADICVYTNGNLT 179

Query: 182 LETLKV 187
           +E++  
Sbjct: 180 VESISR 185


>gi|328957572|ref|YP_004374958.1| ATP-dependent protease subunit HslV [Carnobacterium sp. 17-4]
 gi|328673896|gb|AEB29942.1| ATP-dependent protease subunit HslV [Carnobacterium sp. 17-4]
          Length = 179

 Score =  164 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 85/177 (48%), Positives = 133/177 (75%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + HATTI  ++ +G   +AGDGQV++G Q +MK  ARKVRR+    ++ GFAGS ADAFT
Sbjct: 3   EFHATTIFAIQHNGKCAMAGDGQVTMGEQVIMKGTARKVRRIYNDEVLVGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR D+ ++ LEA++++ +K   L+++G G+V++P
Sbjct: 63  LEEKFEAKLHEYKGNLTRAAVELAQEWRSDRAMQKLEALLIVMNKEEMLMVSGGGEVIQP 122

Query: 131 ENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG++AL+A RAL       +A +IA+++++ AADICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNFALAAGRALKKLGKDLTAAQIAQESLTTAADICVFTNHNIIVEEL 179


>gi|224373290|ref|YP_002607662.1| ATP-dependent protease peptidase subunit [Nautilia profundicola
           AmH]
 gi|223589415|gb|ACM93151.1| peptidase, T1 family [Nautilia profundicola AmH]
          Length = 182

 Score =  164 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 92/180 (51%), Positives = 128/180 (71%), Gaps = 2/180 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + M ATTIL  +KDGV VI GDGQV+ G TV+K NA K+R L  G ++AGFAGS+ADAF 
Sbjct: 3   INMEATTILGYKKDGVAVIGGDGQVTFGHTVLKGNATKIRTLYNGKVLAGFAGSTADAFI 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +  EK LE     L++S ++  K WR DKYLR LEAM+++ ++    +++G GDV+EP
Sbjct: 63  LFDMFEKNLENRKGDLVKSVIDFGKAWRQDKYLRRLEAMMIVLNQKHIFILSGNGDVVEP 122

Query: 131 EN-GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           E+  + AIGSGG+YA+SAARAL   +  S EE+ ++++ IAAD+C+YTNHNI +  L+  
Sbjct: 123 EDGELAAIGSGGNYAISAARALVKHSNLSPEELVKESLHIAADLCIYTNHNIKILKLEKE 182


>gi|167856215|ref|ZP_02478951.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
           29755]
 gi|219871414|ref|YP_002475789.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
           SH0165]
 gi|240947862|ref|ZP_04752302.1| ATP-dependent protease peptidase subunit [Actinobacillus minor
           NM305]
 gi|257464771|ref|ZP_05629142.1| ATP-dependent protease peptidase subunit [Actinobacillus minor 202]
 gi|254802415|sp|B8F689|HSLV_HAEPS RecName: Full=ATP-dependent protease subunit HslV
 gi|167852670|gb|EDS23948.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
           29755]
 gi|219691618|gb|ACL32841.1| ATP-dependent protease peptidase subunit [Haemophilus parasuis
           SH0165]
 gi|240297824|gb|EER48260.1| ATP-dependent protease peptidase subunit [Actinobacillus minor
           NM305]
 gi|257450431|gb|EEV24474.1| ATP-dependent protease peptidase subunit [Actinobacillus minor 202]
          Length = 173

 Score =  164 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 93/171 (54%), Positives = 127/171 (74%), Gaps = 2/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRKDG V I GDGQ +LG  V K   RKVRRL K  ++ GFAGS+ADAF L +  
Sbjct: 2   TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++S+VELAK+WR ++ LR LEAM+++A+++  L+++G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLVKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEFDVL 121

Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG+YA +AA AL+ T+   SA+EI  +A+ IA DI +Y+NHN V+E 
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHNHVIEE 172


>gi|114776987|ref|ZP_01452007.1| 20S proteasome, A and B subunits [Mariprofundus ferrooxydans PV-1]
 gi|114552508|gb|EAU54968.1| 20S proteasome, A and B subunits [Mariprofundus ferrooxydans PV-1]
          Length = 185

 Score =  164 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 98/181 (54%), Positives = 133/181 (73%), Gaps = 1/181 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + M  TTI  VRK+  V I GDGQV+LG TV+K   RKVR +  G I+ GFAGS+ADA  
Sbjct: 4   ISMRGTTICCVRKNSEVAIGGDGQVTLGDTVVKHGGRKVRSIRNGAILTGFAGSTADAMN 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L ER E KL+++   L+R++V LAK+WR DKYLR LEAM+++AD   TL+I+G GDVLEP
Sbjct: 64  LFERFEAKLDEHGGSLMRAAVGLAKEWRTDKYLRQLEAMMIVADADNTLIISGNGDVLEP 123

Query: 131 ENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           ++GV AIGSGG+YA +AA AL   ++  A +IAR+AM IAA+IC+YTN NI ++++   +
Sbjct: 124 DDGVAAIGSGGAYAKAAATALVHHSELKASDIAREAMLIAANICIYTNSNITIKSIPEEN 183

Query: 190 E 190
           +
Sbjct: 184 Q 184


>gi|62263520|gb|AAX78168.1| unknown protein [synthetic construct]
          Length = 218

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 93/176 (52%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TTIL VRK   VVI GDGQ +LG T+ K N  KVR+L  G ++ GFAGS+ADAFTL 
Sbjct: 30  IKGTTILCVRKGDKVVIGGDGQATLGHTIAKENIIKVRKLNGGKVLTGFAGSTADAFTLF 89

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL-EPE 131
           E+ E+KLE Y   L R++VE+ ++WR+D+ L  LEAMI++A++ ++L+I+G GDV+   +
Sbjct: 90  EKFEQKLEFYQGNLERAAVEMVREWRLDRMLSKLEAMIIVANEKLSLLISGAGDVMAADK 149

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           N +++IGSG +YA SAA AL+ +T  SAEEI RK+++IAAD C+YTNHN  +E+L+
Sbjct: 150 NDIISIGSGSTYARSAATALVENTDLSAEEIVRKSLTIAADTCIYTNHNFTIESLE 205


>gi|189500377|ref|YP_001959847.1| ATP-dependent protease peptidase subunit [Chlorobium
           phaeobacteroides BS1]
 gi|238692220|sp|B3EJG6|HSLV_CHLPB RecName: Full=ATP-dependent protease subunit HslV
 gi|189495818|gb|ACE04366.1| 20S proteasome A and B subunits [Chlorobium phaeobacteroides BS1]
          Length = 182

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 92/181 (50%), Positives = 134/181 (74%), Gaps = 1/181 (0%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +++   ++ ATT+L V ++G   +  DGQ++LG TV+K + RK+RRL +  I+ GFAG+
Sbjct: 1   MERYGKPELRATTVLGVIRNGKAALGSDGQMTLGNTVIKHSTRKIRRLRQAQIVTGFAGA 60

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADA TLL+R E+KL+ Y   L R++VELA+DWR DKYLR LEAM+ +      L+I+G 
Sbjct: 61  TADAVTLLDRFEEKLQTYGGLLERAAVELARDWRTDKYLRRLEAMLAVVSPEKALIISGT 120

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           GDV+EPE+G++AIGSG  +AL+AAR+LM  T  +A +I R+++ IAADIC+YTN +IVLE
Sbjct: 121 GDVIEPEDGIVAIGSGSMFALAAARSLMKHTDLNAADIVRESLLIAADICIYTNDHIVLE 180

Query: 184 T 184
            
Sbjct: 181 E 181


>gi|258645672|ref|ZP_05733141.1| ATP-dependent protease HslVU, peptidase subunit [Dialister invisus
           DSM 15470]
 gi|260403039|gb|EEW96586.1| ATP-dependent protease HslVU, peptidase subunit [Dialister invisus
           DSM 15470]
          Length = 177

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 94/175 (53%), Positives = 131/175 (74%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             ATTIL V+KDG   +AGDGQV++G   VMK  ARKVRRL  G +IAGFAGS ADAF L
Sbjct: 2   FTATTILAVKKDGHTAVAGDGQVTMGSAVVMKNTARKVRRLYHGKVIAGFAGSVADAFAL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ++ E KL      L+R++VE AK+WR D+ L+ LEA++++ D     +++G G+V+EP+
Sbjct: 62  FDKFEGKLSDCNGNLVRAAVEFAKEWRRDRVLQKLEALLIMTDGDHLFLVSGSGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG+YAL+AARAL S +  SA EIA +++ +AADICVYTNHN+++E +
Sbjct: 122 DGILAIGSGGNYALAAARALCSVSDLSAREIAEQSLHVAADICVYTNHNVIVEEI 176


>gi|241664960|ref|YP_002983320.1| ATP-dependent protease peptidase subunit [Ralstonia pickettii 12D]
 gi|240866987|gb|ACS64648.1| 20S proteasome A and B subunits [Ralstonia pickettii 12D]
          Length = 178

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 97/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK +ARKVR +  G ++ GFAG++ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGSARKVRAIYDGKVLVGFAGATADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KL+++   LLRS+V+LAKDWR D+ LR+LEAM+++AD+  TL+ITG GDVL+PE
Sbjct: 63  LDRFEAKLQKHQGNLLRSAVDLAKDWRTDRALRHLEAMLIVADREATLIITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA SAA+ALM +T  +  ++  K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGSYAQSAAKALMENTDLAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178


>gi|57236973|ref|YP_178774.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
           RM1221]
 gi|86149885|ref|ZP_01068114.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88596932|ref|ZP_01100168.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|148926639|ref|ZP_01810320.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205355513|ref|ZP_03222284.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218562308|ref|YP_002344087.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|11133089|sp|Q9PHK9|HSLV_CAMJE RecName: Full=ATP-dependent protease subunit HslV
 gi|81557530|sp|Q5HVB1|HSLV_CAMJR RecName: Full=ATP-dependent protease subunit HslV
 gi|57165777|gb|AAW34556.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           RM1221]
 gi|85839703|gb|EAQ56963.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni CF93-6]
 gi|88190621|gb|EAQ94594.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni 84-25]
 gi|112360014|emb|CAL34804.1| ATP-dependent protease HslV [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145845158|gb|EDK22253.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205346747|gb|EDZ33379.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|315058078|gb|ADT72407.1| ATP-dependent protease HslV [Campylobacter jejuni subsp. jejuni S3]
 gi|315926780|gb|EFV06154.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929327|gb|EFV08535.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
           305]
          Length = 180

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 87/178 (48%), Positives = 121/178 (67%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R+L  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L+     LL+++++ +K+WR DKYLR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + AIGSGG+YALSAARAL   T    EE+ + ++ IA +IC+YTN NI    ++  
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIAGEICIYTNTNIKTYVIEDE 179


>gi|223044218|ref|ZP_03614255.1| ATP-dependent protease HslV [Staphylococcus capitis SK14]
 gi|222442368|gb|EEE48476.1| ATP-dependent protease HslV [Staphylococcus capitis SK14]
          Length = 180

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5   LHATTIYAVRHNGDAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ +K   LV++G G+V+ P+
Sbjct: 65  FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILVVSGTGEVIAPD 124

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + ++AIGSGG+YALSA RAL     Q SA+E+A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHASQLSAKEMAYESLKVAADICVFTNDNIIVETL 180


>gi|187930770|ref|YP_001901257.1| ATP-dependent protease peptidase subunit [Ralstonia pickettii 12J]
 gi|309780234|ref|ZP_07674985.1| ATP-dependent protease HslV [Ralstonia sp. 5_7_47FAA]
 gi|238065931|sp|B2U7X2|HSLV_RALPJ RecName: Full=ATP-dependent protease subunit HslV
 gi|187727660|gb|ACD28825.1| 20S proteasome A and B subunits [Ralstonia pickettii 12J]
 gi|308920937|gb|EFP66583.1| ATP-dependent protease HslV [Ralstonia sp. 5_7_47FAA]
          Length = 178

 Score =  163 bits (413), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 98/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK +ARKVR +  G ++ GFAG++ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGSARKVRAIYDGKVLVGFAGATADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KL+++   LLRS+V+LAKDWR D+ LR+LEAM+++AD+  TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLQKHQGNLLRSAVDLAKDWRTDRALRHLEAMLIVADREATLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGGSYA SAA+ALM +T  +  ++  K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGSYAQSAAKALMENTDLAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178


>gi|283957996|ref|ZP_06375447.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|283790145|gb|EFC28962.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           aureus subsp. aureus A017934/97]
          Length = 181

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 100/176 (56%), Positives = 134/176 (76%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +HATTI  VR +    +AGDGQV+LGQ  +MK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 6   LHATTIYAVRHNRKAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK   LV++G G+V+ P+
Sbjct: 66  FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDAILVVSGTGEVIAPD 125

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + ++AIGSGG+YALSA RAL       SAEE+A +++ +AADICV+TN NIV+ETL
Sbjct: 126 DDLIAIGSGGNYALSAGRALKRHASHLSAEEMAYESLKVAADICVFTNDNIVVETL 181


>gi|212639573|ref|YP_002316093.1| ATP-dependent protease peptidase subunit [Anoxybacillus
           flavithermus WK1]
 gi|254802328|sp|B7GGC6|HSLV_ANOFW RecName: Full=ATP-dependent protease subunit HslV
 gi|212561053|gb|ACJ34108.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Anoxybacillus flavithermus WK1]
          Length = 182

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 96/181 (53%), Positives = 133/181 (73%), Gaps = 4/181 (2%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSAD 67
           +  + HATTI  +R  G   +AGDGQV+ G   VMK  ARK+R+L  GN++AGFAG+ AD
Sbjct: 2   FMSQFHATTIFAIRHQGKGAMAGDGQVTFGNAVVMKHTARKIRKLFHGNVLAGFAGAVAD 61

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           AFTL E  E KLE+Y   L R++VELAK+WR DK LR LEAM+++ D T  L+I+G G+V
Sbjct: 62  AFTLFEMFEGKLEEYNGNLQRAAVELAKEWRSDKVLRRLEAMLIVMDATHLLLISGTGEV 121

Query: 128 LEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLET 184
           +EP++G++AIGSGG+YAL+A RAL +      +A++IA+ A+ +A+DICVYTN  I++E 
Sbjct: 122 IEPDDGILAIGSGGNYALAAGRALKAYAGEHLTAKQIAQAALKVASDICVYTNDCIIVEE 181

Query: 185 L 185
           L
Sbjct: 182 L 182


>gi|314933432|ref|ZP_07840797.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           caprae C87]
 gi|313653582|gb|EFS17339.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           caprae C87]
          Length = 180

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 98/176 (55%), Positives = 136/176 (77%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 5   LHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ +K   LV++G G+V+ P+
Sbjct: 65  FEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILVVSGTGEVIAPD 124

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + ++AIGSGG+YALSA RAL     Q SA+++A +++ +AADICV+TN NI++ETL
Sbjct: 125 DDLIAIGSGGNYALSAGRALKRHASQLSAKDMAYESLKVAADICVFTNDNIIVETL 180


>gi|160903078|ref|YP_001568659.1| ATP-dependent protease peptidase subunit [Petrotoga mobilis SJ95]
 gi|189036230|sp|A9BI45|HSLV_PETMO RecName: Full=ATP-dependent protease subunit HslV
 gi|160360722|gb|ABX32336.1| 20S proteasome A and B subunits [Petrotoga mobilis SJ95]
          Length = 177

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 91/177 (51%), Positives = 127/177 (71%), Gaps = 1/177 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  H TTIL V+++G  VI GDGQV++G+T+ K NA+KVRRLG+G +I+GFAGS ADA  
Sbjct: 1   MDFHGTTILGVKRNGKTVICGDGQVTMGETIFKGNAKKVRRLGEGKVISGFAGSVADALA 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L ER E K +     L++++VEL K+WRMDK LR LEA++L+ADK    +I+G G+V+EP
Sbjct: 61  LYERFEGKYKSSHGNLMKAAVELTKEWRMDKALRRLEALLLVADKENIFLISGNGEVMEP 120

Query: 131 ENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +   +AIGSGG     +A   L +T   AEEIA+KA+ IA +IC+YTN NI +E ++
Sbjct: 121 QEDAIAIGSGGPYAYAAAMALLRNTDLDAEEIAQKAIKIAGEICIYTNDNITMEIIE 177


>gi|169830787|ref|YP_001716769.1| ATP-dependent protease peptidase subunit [Candidatus Desulforudis
           audaxviator MP104C]
 gi|238065854|sp|B1I260|HSLV_DESAP RecName: Full=ATP-dependent protease subunit HslV
 gi|169637631|gb|ACA59137.1| 20S proteasome, A and B subunits [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 177

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 87/175 (49%), Positives = 123/175 (70%), Gaps = 2/175 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +    TTI+ V++DG V +AGDGQV LG   ++K +A K+RRL K  ++AGFAGS ADAF
Sbjct: 1   MTFKGTTIVAVKRDGAVALAGDGQVGLGNGIIVKRDAVKLRRLYKDRVVAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            L ER E KLE+    L R++V+LAKDWR DKYLR LEA++++AD+   L+I+G G+V+E
Sbjct: 61  ALFERFEGKLEESQGNLRRAAVQLAKDWRTDKYLRRLEALLVVADREAVLLISGGGEVIE 120

Query: 130 PENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           P++G++A+GSGG     +A      T   A +IAR+A+ IA+ ICV+TN  I +E
Sbjct: 121 PDDGIIAVGSGGAFALAAARALARHTALPAVDIAREALQIASQICVHTNDRITVE 175


>gi|315639033|ref|ZP_07894203.1| ATP-dependent protease HslVU [Campylobacter upsaliensis JV21]
 gi|315480945|gb|EFU71579.1| ATP-dependent protease HslVU [Campylobacter upsaliensis JV21]
          Length = 181

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 90/179 (50%), Positives = 121/179 (67%), Gaps = 3/179 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVSLG TVMK NA K+R+L  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSLGNTVMKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L+     LL+++++ +K+WR DKYLR LEAM+L+ D+    +++G GDVLEPE+
Sbjct: 62  DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRKHIFLLSGTGDVLEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + AIGSGG+YALSAARAL         EE+ + ++ IA +ICVYTN NI    ++  
Sbjct: 122 NQIAAIGSGGNYALSAARALKKHAQNLDEEELVKSSLQIAGEICVYTNTNIKTYVIEDE 180


>gi|209696146|ref|YP_002264076.1| ATP-dependent protease peptidase subunit [Aliivibrio salmonicida
           LFI1238]
 gi|208010099|emb|CAQ80424.1| ATP-dependent protease HslV (heat shock protein HslV) [Aliivibrio
           salmonicida LFI1238]
          Length = 176

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 90/174 (51%), Positives = 125/174 (71%), Gaps = 1/174 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ S G  + K N +KVRRL   +++ GFAGS+ADAF L +  
Sbjct: 2   TTIVSVRREGKVVIAGDGQASQGDMIAKGNVKKVRRLYNDSVLVGFAGSTADAFILFDLC 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E+KLE +   L +++VELAKDWR D+ LR LEAM+++AD T +L+I+G GD++  +N ++
Sbjct: 62  ERKLEMHQGNLTKAAVELAKDWRSDRNLRRLEAMLIVADDTTSLIISGTGDLINADNDLL 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            IGSGG +A SAA AL+ +T   A +IA KA++IA D  VYTNHN  +E L   
Sbjct: 122 TIGSGGYFARSAATALLENTDLDAYDIAVKALTIAGDTDVYTNHNHTVEVLDTN 175


>gi|283953974|ref|ZP_06371503.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni 414]
 gi|283794579|gb|EFC33319.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni 414]
          Length = 180

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 87/178 (48%), Positives = 121/178 (67%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R+L  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L+     LL+++++ +K+WR DKYLR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + AIGSGG+YALSAARAL   T    EE+ + ++ IA +IC+YTN NI    ++  
Sbjct: 122 GKIAAIGSGGNYALSAARALAKHTDLDEEELVKSSLQIAGEICIYTNTNIKTYVIEDE 179


>gi|159139475|gb|AAK85868.2| heat shock protein hslV [Agrobacterium tumefaciens str. C58]
          Length = 160

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 121/160 (75%), Positives = 144/160 (90%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           +AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLL+RLEKKLEQYP QL+R
Sbjct: 1   MAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRLEKKLEQYPGQLMR 60

Query: 89  SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
           ++VELAKDWR DKYLRNLEAM+L+ADK+ TL ITG GDVLEPE+G +AIGSGG+YA +AA
Sbjct: 61  AAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAIAIGSGGNYAFAAA 120

Query: 149 RALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           RA+M T  SAEE+AR+++ IAADICVYTNHN+V+ETL   
Sbjct: 121 RAMMDTDKSAEEVARQSLDIAADICVYTNHNLVVETLDAE 160


>gi|319785876|ref|YP_004145351.1| 20S proteasome A and subunit betas [Pseudoxanthomonas suwonensis
           11-1]
 gi|317464388|gb|ADV26120.1| 20S proteasome A and B subunits [Pseudoxanthomonas suwonensis 11-1]
          Length = 183

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 104/184 (56%), Positives = 133/184 (72%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M         HATTI+ VR+   V IAGDGQV+LG TVMK NARKVRRLG  G ++AGFA
Sbjct: 1   MDPSQNPNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KLE++  QL R++VELAKDWR ++ L  LEA++ +AD+  +LVI+
Sbjct: 61  GAAADAFTLFELFEAKLEKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADRETSLVIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSY   +A   L  TQ  A  IA +A+ IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTQLDARTIATEAIGIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|303253152|ref|ZP_07339301.1| ATP-dependent protease peptidase subunit [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307257825|ref|ZP_07539582.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307262229|ref|ZP_07543879.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|322513250|ref|ZP_08066374.1| ATP-dependent protease HslV [Actinobacillus ureae ATCC 25976]
 gi|302647834|gb|EFL78041.1| ATP-dependent protease peptidase subunit [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306863731|gb|EFM95657.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306868103|gb|EFM99929.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|322120957|gb|EFX92804.1| ATP-dependent protease HslV [Actinobacillus ureae ATCC 25976]
          Length = 173

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 92/171 (53%), Positives = 126/171 (73%), Gaps = 2/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRKDG V I GDGQ +LG  V K   RKVRR+ K  ++ GFAGS+ADAF L +  
Sbjct: 2   TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++S+VELAK+WR ++ LR LEAM+++A+++  L+++G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121

Query: 136 AIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG+YA +AA AL+ T    SA+EI  +A+ IA DI +Y+NHN V+E 
Sbjct: 122 AIGSGGNYAKAAALALLRTQNNLSAKEIVAEALKIAGDIDIYSNHNHVIEE 172


>gi|32035736|ref|ZP_00135612.1| COG5405: ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209200|ref|YP_001054425.1| ATP-dependent protease peptidase subunit [Actinobacillus
           pleuropneumoniae L20]
 gi|165977173|ref|YP_001652766.1| ATP-dependent protease peptidase subunit [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190151066|ref|YP_001969591.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307264430|ref|ZP_07546016.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|166221619|sp|A3N334|HSLV_ACTP2 RecName: Full=ATP-dependent protease subunit HslV
 gi|238065805|sp|B3GYW3|HSLV_ACTP7 RecName: Full=ATP-dependent protease subunit HslV
 gi|238065806|sp|B0BSG5|HSLV_ACTPJ RecName: Full=ATP-dependent protease subunit HslV
 gi|126097992|gb|ABN74820.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|165877274|gb|ABY70322.1| ATP-dependent protease [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|189916197|gb|ACE62449.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306870246|gb|EFN02004.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 173

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 92/171 (53%), Positives = 127/171 (74%), Gaps = 2/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRKDG V I GDGQ +LG  V K   RKVRR+ K  ++ GFAGS+ADAF L +  
Sbjct: 2   TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++S+VELAK+WR ++ LR LEAM+++A+++  L+++G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121

Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG+YA +AA AL+ T+   SA+EI  +A+ IA DI +Y+NHN V+E 
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHNHVIEE 172


>gi|27467847|ref|NP_764484.1| ATP-dependent protease peptidase subunit [Staphylococcus
           epidermidis ATCC 12228]
 gi|57866719|ref|YP_188401.1| ATP-dependent protease peptidase subunit [Staphylococcus
           epidermidis RP62A]
 gi|251810684|ref|ZP_04825157.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282876315|ref|ZP_06285182.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           epidermidis SK135]
 gi|293366783|ref|ZP_06613459.1| heat shock protein HslVU [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|38258090|sp|Q8CPH1|HSLV_STAES RecName: Full=ATP-dependent protease subunit HslV
 gi|71152140|sp|Q5HPT9|HSLV_STAEQ RecName: Full=ATP-dependent protease subunit HslV
 gi|27315392|gb|AAO04526.1|AE016747_23 heat shock protein HslV [Staphylococcus epidermidis ATCC 12228]
 gi|57637377|gb|AAW54165.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           epidermidis RP62A]
 gi|251805844|gb|EES58501.1| T01 family HslV component of HsIUV peptidase [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295340|gb|EFA87867.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           epidermidis SK135]
 gi|291319084|gb|EFE59454.1| heat shock protein HslVU [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329724353|gb|EGG60865.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           epidermidis VCU144]
 gi|329736215|gb|EGG72487.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           epidermidis VCU028]
 gi|329736581|gb|EGG72847.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           epidermidis VCU045]
          Length = 180

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 98/177 (55%), Positives = 135/177 (76%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL +G ++AGFAGS ADAFT
Sbjct: 4   SLHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYEGKVLAGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ +K   L+++G G+V+ P
Sbjct: 64  LFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMNKDAILIVSGTGEVIAP 123

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL     Q SA E+A +++ +AADICV+TN NI++ETL
Sbjct: 124 DDDLIAIGSGGNYALSAGRALKRHAAQLSASEMAYESLKVAADICVFTNDNIIVETL 180


>gi|57242465|ref|ZP_00370403.1| heat shock protein [Campylobacter upsaliensis RM3195]
 gi|57016750|gb|EAL53533.1| heat shock protein [Campylobacter upsaliensis RM3195]
          Length = 181

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 89/179 (49%), Positives = 121/179 (67%), Gaps = 3/179 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVSLG T+MK NA K+R+L  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSLGNTIMKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L+     LL+++++ +K+WR DKYLR LEAM+L+ D+    +++G GDVLEPE+
Sbjct: 62  DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRKHIFLLSGTGDVLEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + AIGSGG+YALSAARAL         EE+ + ++ IA +ICVYTN NI    ++  
Sbjct: 122 NQIAAIGSGGNYALSAARALKKHALNLDEEELVKSSLQIAGEICVYTNTNIKTYVIEDE 180


>gi|159901850|gb|ABX10585.1| ATP-dependent protease [uncultured planctomycete 5H12]
          Length = 206

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 96/185 (51%), Positives = 133/185 (71%), Gaps = 1/185 (0%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           D    +K+HATTILTV   G V + GDGQV+LG  VMK +A K+R+L  G ++ GFAGSS
Sbjct: 22  DWKQKMKIHATTILTVEHQGSVAMGGDGQVTLGNAVMKTDAMKIRKLLGGRVLCGFAGSS 81

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           ADAF LLER E++L+  P  + R++ ELA+ WR DK LR LEA++ + D   TL+I+G G
Sbjct: 82  ADAFALLERFEEQLKDSPENIPRAATELARQWRTDKALRQLEALLTVTDGKNTLLISGTG 141

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           DV++P +GV+ IGSGG+YA++AARAL   +Q SA EI  +++ IA  I +YTN NI++ET
Sbjct: 142 DVIQPTDGVVGIGSGGNYAIAAARALKEHSQLSASEIVVESLKIAGGIDIYTNTNIIVET 201

Query: 185 LKVGD 189
           L + +
Sbjct: 202 LGLME 206


>gi|258511366|ref|YP_003184800.1| ATP-dependent protease peptidase subunit [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478092|gb|ACV58411.1| 20S proteasome A and B subunits [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 181

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 93/179 (51%), Positives = 126/179 (70%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
            +MH TTI  + +DG   +AGDGQV+ G   VMK +ARKVRRL    ++AGFAGS ADAF
Sbjct: 3   YEMHGTTIFAMLRDGRGAMAGDGQVTFGNSMVMKHSARKVRRLYHDRVVAGFAGSVADAF 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER EKKLE++   L R++VELAK WR DK L+ LEAM+++ D    L+++G G+V++
Sbjct: 63  TLFERFEKKLEEFQGNLPRAAVELAKAWRSDKILQKLEAMLVVMDARDLLIVSGGGEVIQ 122

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P++G+ AIGSGG Y   +      +TQ    EIA++A+ IA++ICVYTN  IVLET+ V
Sbjct: 123 PDDGICAIGSGGGYALAAGRALARNTQLEPAEIAKQALIIASEICVYTNDQIVLETVGV 181


>gi|219682474|ref|YP_002468858.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|219622207|gb|ACL30363.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
          Length = 170

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 92/166 (55%), Positives = 126/166 (75%), Gaps = 1/166 (0%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +R    VVI GDGQ +LG T+MK+N +K+R L    +IAGFAG +ADAFTL E  +KKL 
Sbjct: 1   MRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLA 60

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
            Y  QL R+++ELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PE+ ++AIGSG
Sbjct: 61  MYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLIAIGSG 120

Query: 141 GSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           GSYA S+ARAL+ +T   A +I RK+++IAA+IC+YTNHN  ++ L
Sbjct: 121 GSYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 166


>gi|289550956|ref|YP_003471860.1| ATP-dependent protease HslV [Staphylococcus lugdunensis HKU09-01]
 gi|289180488|gb|ADC87733.1| ATP-dependent protease HslV [Staphylococcus lugdunensis HKU09-01]
          Length = 180

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 97/177 (54%), Positives = 134/177 (75%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL    ++AGFAGS ADAFT
Sbjct: 4   SIHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYDDKVLAGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK+  LV++G G+V+ P
Sbjct: 64  LFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVVDKSGILVVSGTGEVIAP 123

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL       SA+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 124 DDDIIAIGSGGNYALSAGRALKRHAAHLSAKEMAYESLKVASDICVFTNDNIIVETL 180


>gi|332524480|ref|ZP_08400689.1| ATP-dependent protease subunit HslV [Rubrivivax benzoatilyticus
           JA2]
 gi|332107798|gb|EGJ09022.1| ATP-dependent protease subunit HslV [Rubrivivax benzoatilyticus
           JA2]
          Length = 179

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 89/177 (50%), Positives = 129/177 (72%), Gaps = 1/177 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             H TTIL+VR+  +V + GDGQV+LG  V+K++ARKVR+L +  ++AGFAG++ADAFTL
Sbjct: 3   SFHGTTILSVRRGPLVALGGDGQVTLGTIVVKSSARKVRKLYRDQVLAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L R+++EL KDWR D+ LR LEAM+ +AD T +L+ITG GDVLEPE
Sbjct: 63  FERFEAKLEKHQGHLQRAAIELTKDWRTDRVLRRLEAMLAVADATSSLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           +G++AIGSGG     +A   L  T+ + ++I ++++ IA D+C+YTN +  +E L  
Sbjct: 123 HGIVAIGSGGAYAQAAARALLQHTELAPQDIVKRSLEIAGDLCIYTNQSHTIEVLGA 179


>gi|163791335|ref|ZP_02185748.1| ATP-dependent protease peptidase subunit [Carnobacterium sp. AT7]
 gi|159873414|gb|EDP67505.1| ATP-dependent protease peptidase subunit [Carnobacterium sp. AT7]
          Length = 179

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 86/177 (48%), Positives = 132/177 (74%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + HATTI  ++ DG   +AGDGQV++G Q +MK  ARKVRR+    ++ GFAGS ADAFT
Sbjct: 3   EFHATTIFAIQHDGKCAMAGDGQVTMGEQVIMKGTARKVRRIYNDEVLVGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR D+ ++ LEA++++ +K   L+++G G+V++P
Sbjct: 63  LEEKFEAKLHEYKGNLTRAAVELAQEWRSDRAMQKLEALLIVMNKEEMLMVSGGGEVIQP 122

Query: 131 ENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG++AL+A RAL       +A +IA ++++ AADICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNFALAAGRALKKLGKGLTAAQIAEESLNTAADICVFTNHNIIVEEL 179


>gi|228474958|ref|ZP_04059686.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           hominis SK119]
 gi|314936586|ref|ZP_07843933.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           hominis subsp. hominis C80]
 gi|228270943|gb|EEK12331.1| ATP-dependent protease HslVU, peptidase subunit [Staphylococcus
           hominis SK119]
 gi|313655205|gb|EFS18950.1| heat shock protein HslVU, ATPase subunit HslV [Staphylococcus
           hominis subsp. hominis C80]
          Length = 181

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 97/177 (54%), Positives = 135/177 (76%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  VR +G   +AGDGQV+LG Q +MK  ARKVRRL +G ++AGFAGS ADAFT
Sbjct: 5   SLHATTIYAVRHNGEAAMAGDGQVTLGEQVIMKQTARKVRRLYEGKVLAGFAGSVADAFT 64

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK   LV++G G+V+ P
Sbjct: 65  LFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKDGILVVSGTGEVIAP 124

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL       +A+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 125 DDDLIAIGSGGNYALSAGRALKRHASHMTAKEMAYESLKVASDICVFTNDNIIVETL 181


>gi|157164513|ref|YP_001466812.1| ATP-dependent protease peptidase subunit [Campylobacter concisus
           13826]
 gi|166221631|sp|A7ZDF4|HSLV_CAMC1 RecName: Full=ATP-dependent protease subunit HslV
 gi|112801304|gb|EAT98648.1| ATP-dependent protease HslV [Campylobacter concisus 13826]
          Length = 177

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 89/176 (50%), Positives = 121/176 (68%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R++  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKAVIGGDGQVSFGNTVLKGNAVKIRKIHNGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  EK LE     LL++ +E +K+WR DKYLR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFEKNLEHTKGDLLKAVIEFSKEWRKDKYLRKLEAMMLVLDRDKIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             + AIGSGG+YALSAARAL        EE+ ++++ IA +IC+YTN NI    L+
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFADIDEEELVKESLKIAGEICIYTNTNIKTYVLE 177


>gi|315658458|ref|ZP_07911330.1| ATP-dependent protease HslVU [Staphylococcus lugdunensis M23590]
 gi|315496787|gb|EFU85110.1| ATP-dependent protease HslVU [Staphylococcus lugdunensis M23590]
          Length = 180

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 97/177 (54%), Positives = 134/177 (75%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  VR +G   +AGDGQV+LGQ  +MK  ARKVRRL    ++AGFAGS ADAFT
Sbjct: 4   SIHATTIYAVRHNGEAAMAGDGQVTLGQQVIMKQTARKVRRLYDDKVLAGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ DK+  LV++G G+V+ P
Sbjct: 64  LFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDKSGILVVSGTGEVIAP 123

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL       SA+E+A +++ +A+DICV+TN NI++ETL
Sbjct: 124 DDDIIAIGSGGNYALSAGRALKRHAAHLSAKEMAYESLKVASDICVFTNDNIIVETL 180


>gi|257869687|ref|ZP_05649340.1| 20S proteasome protein [Enterococcus gallinarum EG2]
 gi|257803851|gb|EEV32673.1| 20S proteasome protein [Enterococcus gallinarum EG2]
          Length = 180

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 92/175 (52%), Positives = 130/175 (74%), Gaps = 3/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            H+TTI  V KDG   +AGDGQV++G Q VMK  ARKVRR+  G ++ GFAGS ADAFTL
Sbjct: 5   FHSTTICAVEKDGKFAMAGDGQVTMGEQVVMKGTARKVRRIYNGEVVVGFAGSVADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ ++   L+++G G+V+ P+
Sbjct: 65  EEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNQEEMLLVSGTGEVISPD 124

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
            G++AIGSGG+YAL+AARA+       SA+EIA  A++IAADICV+TNHNI++E 
Sbjct: 125 EGILAIGSGGNYALAAARAMKRYGGDLSAKEIAEGALNIAADICVFTNHNIIVEE 179


>gi|300921946|ref|ZP_07138095.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 182-1]
 gi|301328292|ref|ZP_07221408.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 78-1]
 gi|300421670|gb|EFK04981.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 182-1]
 gi|300845254|gb|EFK73014.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 78-1]
          Length = 164

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 95/159 (59%), Positives = 123/159 (77%), Gaps = 1/159 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 2   VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62  KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            RAL+ +T+ SA EIA KA+ IA DIC+YTNH   +E L
Sbjct: 122 VRALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 160


>gi|227885326|ref|ZP_04003131.1| ATP-dependent protease peptidase subunit [Escherichia coli 83972]
 gi|300819904|ref|ZP_07100088.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 107-1]
 gi|300825077|ref|ZP_07105172.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 119-7]
 gi|300899910|ref|ZP_07118118.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 198-1]
 gi|300919130|ref|ZP_07135667.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 115-1]
 gi|300931626|ref|ZP_07146936.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 187-1]
 gi|300938384|ref|ZP_07153131.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 21-1]
 gi|300948288|ref|ZP_07162403.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 116-1]
 gi|300954661|ref|ZP_07167102.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 175-1]
 gi|300975843|ref|ZP_07173192.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 45-1]
 gi|300986109|ref|ZP_07177723.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 200-1]
 gi|301022812|ref|ZP_07186653.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 69-1]
 gi|301048654|ref|ZP_07195666.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 185-1]
 gi|301303410|ref|ZP_07209534.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 124-1]
 gi|301645123|ref|ZP_07245081.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 146-1]
 gi|309783875|ref|ZP_07678520.1| ATP-dependent protease hslV [Shigella dysenteriae 1617]
 gi|309796645|ref|ZP_07691051.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 145-7]
 gi|312971780|ref|ZP_07785954.1| ATP-dependent protease hslV [Escherichia coli 1827-70]
 gi|227837702|gb|EEJ48168.1| ATP-dependent protease peptidase subunit [Escherichia coli 83972]
 gi|300299521|gb|EFJ55906.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 185-1]
 gi|300306417|gb|EFJ60937.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 200-1]
 gi|300318372|gb|EFJ68156.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 175-1]
 gi|300356538|gb|EFJ72408.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 198-1]
 gi|300397361|gb|EFJ80899.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 69-1]
 gi|300410196|gb|EFJ93734.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 45-1]
 gi|300413764|gb|EFJ97074.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 115-1]
 gi|300452189|gb|EFK15809.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 116-1]
 gi|300456654|gb|EFK20147.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 21-1]
 gi|300460590|gb|EFK24083.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 187-1]
 gi|300522429|gb|EFK43498.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 119-7]
 gi|300527544|gb|EFK48606.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 107-1]
 gi|300841364|gb|EFK69124.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 124-1]
 gi|301076550|gb|EFK91356.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 146-1]
 gi|308119801|gb|EFO57063.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 145-7]
 gi|308928246|gb|EFP73708.1| ATP-dependent protease hslV [Shigella dysenteriae 1617]
 gi|310334157|gb|EFQ00362.1| ATP-dependent protease hslV [Escherichia coli 1827-70]
 gi|315254305|gb|EFU34273.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 85-1]
 gi|315292704|gb|EFU52056.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 153-1]
 gi|315298415|gb|EFU57670.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 16-3]
 gi|315617727|gb|EFU98332.1| ATP-dependent protease hslV [Escherichia coli 3431]
 gi|320175374|gb|EFW50477.1| ATP-dependent protease HslV [Shigella dysenteriae CDC 74-1112]
 gi|320180701|gb|EFW55627.1| ATP-dependent protease HslV [Shigella boydii ATCC 9905]
 gi|320184936|gb|EFW59720.1| ATP-dependent protease HslV [Shigella flexneri CDC 796-83]
 gi|320190968|gb|EFW65618.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. EC1212]
 gi|320196804|gb|EFW71426.1| ATP-dependent protease HslV [Escherichia coli WV_060327]
 gi|323153991|gb|EFZ40200.1| ATP-dependent protease hslV [Escherichia coli EPECa14]
 gi|323161166|gb|EFZ47083.1| ATP-dependent protease hslV [Escherichia coli E128010]
 gi|323167401|gb|EFZ53109.1| ATP-dependent protease hslV [Shigella sonnei 53G]
 gi|323174330|gb|EFZ59956.1| ATP-dependent protease hslV [Escherichia coli LT-68]
 gi|323182345|gb|EFZ67754.1| ATP-dependent protease hslV [Escherichia coli 1357]
 gi|323189646|gb|EFZ74925.1| ATP-dependent protease hslV [Escherichia coli RN587/1]
 gi|324006728|gb|EGB75947.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 57-2]
 gi|324012499|gb|EGB81718.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 60-1]
 gi|324020555|gb|EGB89774.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 117-3]
 gi|325499330|gb|EGC97189.1| ATP-dependent protease peptidase subunit [Escherichia fergusonii
           ECD227]
 gi|326338055|gb|EGD61885.1| ATP-dependent protease HslV [Escherichia coli O157:H7 str. 1044]
 gi|332084173|gb|EGI89378.1| ATP-dependent protease hslV [Shigella boydii 5216-82]
 gi|332085169|gb|EGI90347.1| ATP-dependent protease hslV [Shigella dysenteriae 155-74]
 gi|332088327|gb|EGI93447.1| ATP-dependent protease hslV [Shigella boydii 3594-74]
 gi|332751578|gb|EGJ81977.1| ATP-dependent protease hslV [Shigella flexneri 4343-70]
 gi|332764528|gb|EGJ94760.1| ATP-dependent protease subunit HslV [Shigella flexneri 2930-71]
 gi|332997991|gb|EGK17597.1| ATP-dependent protease hslV [Shigella flexneri VA-6]
 gi|332998438|gb|EGK18036.1| ATP-dependent protease hslV [Shigella flexneri K-272]
 gi|333014131|gb|EGK33488.1| ATP-dependent protease hslV [Shigella flexneri K-227]
          Length = 164

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 96/159 (60%), Positives = 124/159 (77%), Gaps = 1/159 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 2   VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62  KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ARAL+ +T+ SA EIA KA+ IA DIC+YTNH   +E L
Sbjct: 122 ARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 160


>gi|83748662|ref|ZP_00945680.1| ATP-dependent protease hslV [Ralstonia solanacearum UW551]
 gi|207727529|ref|YP_002255923.1| atp-dependent protease hslv protein [Ralstonia solanacearum MolK2]
 gi|207741921|ref|YP_002258313.1| atp-dependent protease hslv protein [Ralstonia solanacearum
           IPO1609]
 gi|300705553|ref|YP_003747156.1| peptidase component of the hsluv protease [Ralstonia solanacearum
           CFBP2957]
 gi|83724706|gb|EAP71866.1| ATP-dependent protease hslV [Ralstonia solanacearum UW551]
 gi|206590766|emb|CAQ56378.1| atp-dependent protease hslv protein [Ralstonia solanacearum MolK2]
 gi|206593307|emb|CAQ60234.1| atp-dependent protease hslv protein [Ralstonia solanacearum
           IPO1609]
 gi|299073217|emb|CBJ44575.1| peptidase component of the HslUV protease [Ralstonia solanacearum
           CFBP2957]
          Length = 178

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 96/176 (54%), Positives = 138/176 (78%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK +ARKVR +  G ++ GFAG++ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGSARKVRTIYDGKVLVGFAGATADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KL++Y   LLR++V+LAKDWR D+ LR+LEAM+++AD+  TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA SAA+AL+ +T+ +  ++  K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALVENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178


>gi|282856242|ref|ZP_06265525.1| ATP-dependent protease HslVU, peptidase subunit [Pyramidobacter
           piscolens W5455]
 gi|282586001|gb|EFB91286.1| ATP-dependent protease HslVU, peptidase subunit [Pyramidobacter
           piscolens W5455]
          Length = 180

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 89/180 (49%), Positives = 134/180 (74%), Gaps = 1/180 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               V +H TTI+ VRK+G V + GDGQ++LG  ++KA  +KVR+L  GN++ GFAG++A
Sbjct: 1   MSQNVTIHGTTIVCVRKNGQVAMGGDGQMTLGNQIIKAGTKKVRKLYDGNVLVGFAGATA 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DA TL+E  EKKL++Y   L+R+SVELAK WR D+ L+ LEAM+L+AD+  T++++G GD
Sbjct: 61  DAMTLMELFEKKLQEYSGNLMRASVELAKMWRTDRMLQKLEAMLLVADREHTILLSGAGD 120

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+EPEN   ++GSG  YAL+AARA +  +   A EIA++++ IA++IC+YT++ + +E L
Sbjct: 121 VIEPENDAASVGSGSGYALAAARAYLDVSSLDAAEIAKRSLLIASEICIYTDNILTVEVL 180


>gi|30250192|ref|NP_842262.1| ATP-dependent protease peptidase subunit [Nitrosomonas europaea
           ATCC 19718]
 gi|47605675|sp|Q82SP7|HSLV_NITEU RecName: Full=ATP-dependent protease subunit HslV
 gi|30180987|emb|CAD86172.1| Multispecific proteasome proteases [Nitrosomonas europaea ATCC
           19718]
          Length = 173

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 102/172 (59%), Positives = 131/172 (76%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   V + GDGQV+LG  V KA+ARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGRQVALGGDGQVTLGAVVAKASARKVRRLYHNKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE++   L+RS+VELAKDWR D+ LR LEAM+++AD   TL+ITG GDV+EPE G+ 
Sbjct: 62  EAKLEKHQGHLMRSAVELAKDWRTDRILRRLEAMLVVADHEATLIITGAGDVIEPEQGIA 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG+YA +AARAL+ +T  S +EI  KA++IA DIC+YTN   V+E L 
Sbjct: 122 AIGSGGAYAQAAARALLENTDLSPKEIVTKALTIAGDICIYTNQVHVIEQLD 173


>gi|313892579|ref|ZP_07826166.1| ATP-dependent protease HslVU, peptidase subunit [Dialister
           microaerophilus UPII 345-E]
 gi|329121221|ref|ZP_08249848.1| heat shock protein HslV [Dialister micraerophilus DSM 19965]
 gi|313118976|gb|EFR42181.1| ATP-dependent protease HslVU, peptidase subunit [Dialister
           microaerophilus UPII 345-E]
 gi|327470155|gb|EGF15618.1| heat shock protein HslV [Dialister micraerophilus DSM 19965]
          Length = 176

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 91/175 (52%), Positives = 128/175 (73%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            +ATTI+ V+KDG   +AGDGQV++G   +MK  ARKVRRL  G +IAGFAGS ADAF L
Sbjct: 2   FNATTIIAVKKDGHTAVAGDGQVTMGNAVIMKNTARKVRRLYNGKVIAGFAGSVADAFAL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ++ E KL      LLR++VE AKDWR D+ L+ LEA++++ D T   +++G G+V+EP+
Sbjct: 62  FDKFEMKLSDCNGNLLRAAVEFAKDWRRDRVLQKLEALLIMTDGTHLFLVSGSGEVIEPD 121

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGG+Y   +A      T+ SA EIA K+++IAADICVYTNHN+++E +
Sbjct: 122 DGILAIGSGGNYALAAARALNAETELSAREIAEKSINIAADICVYTNHNVIVEEI 176


>gi|219681919|ref|YP_002468305.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           5A (Acyrthosiphon pisum)]
 gi|219624762|gb|ACL30917.1| ATP-dependent protease peptidase subunit [Buchnera aphidicola str.
           5A (Acyrthosiphon pisum)]
          Length = 170

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 93/166 (56%), Positives = 126/166 (75%), Gaps = 1/166 (0%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +R    VVI GDGQ +LG T+MK+N +K+R L    +IAGFAG +ADAFTL E  +KKL 
Sbjct: 1   MRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLA 60

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
            Y  QL R+++ELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PEN ++AIGSG
Sbjct: 61  MYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPENDLIAIGSG 120

Query: 141 GSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           GSYA S+ARAL+ +T   A +I RK+++IAA+IC+YTNHN  ++ L
Sbjct: 121 GSYAQSSARALIENTNLDANQIVRKSLNIAANICIYTNHNFTIKEL 166


>gi|32491027|ref|NP_871281.1| ATP-dependent protease peptidase subunit [Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis]
 gi|31340163|sp|Q8D2S6|HSLV_WIGBR RecName: Full=ATP-dependent protease subunit HslV
 gi|25166233|dbj|BAC24424.1| hslV [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 180

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 94/171 (54%), Positives = 128/171 (74%), Gaps = 1/171 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G +VI GDGQ +LG T+MK N +KVR L    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHIVIGGDGQATLGNTIMKNNVKKVRTLYNDTVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKL+ +  + ++S+VELAKDWR D+ LR LEA++ +ADK  +L+ITG  DV++PE+ V+
Sbjct: 62  EKKLQIHQGRFVKSAVELAKDWRTDRMLRRLEALLAVADKNTSLIITGNADVIQPESDVI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSGG YA SAARAL+ +T   A +I RK++ I+ DIC+Y+NH    E L
Sbjct: 122 AIGSGGPYAQSAARALLENTDLCARDIVRKSLQISGDICLYSNHFFSFEEL 172


>gi|320101719|ref|YP_004177310.1| ATP dependent peptidase CodWX, CodW component [Isosphaera pallida
           ATCC 43644]
 gi|319749001|gb|ADV60761.1| ATP dependent peptidase CodWX, CodW component [Isosphaera pallida
           ATCC 43644]
          Length = 176

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 86/174 (49%), Positives = 123/174 (70%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTILT R+   V + GDGQV+LG T+MKA+A K+RRL  G ++ GFAG +AD   L+
Sbjct: 2   WRRTTILTARRGNRVALGGDGQVTLGATIMKADASKIRRLLDGKVLVGFAGGAADGLALV 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ E KL+ +P+ L R++VELAK WR D+ LR LEAM++ AD   +L+I+G GDV++P +
Sbjct: 62  EKFEAKLKDHPDNLPRAAVELAKLWRTDRLLRRLEAMLIAADARHSLLISGSGDVIQPND 121

Query: 133 GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           G++A GSGG +AL+AARAL   T      + R+A++IAA I +YTN  +++E L
Sbjct: 122 GLVAAGSGGMFALAAARALVKHTDLDPAALVREALTIAAGIDIYTNDQLIVEEL 175


>gi|242280397|ref|YP_002992526.1| ATP-dependent protease peptidase subunit [Desulfovibrio salexigens
           DSM 2638]
 gi|259491385|sp|C6C0P0|HSLV_DESAD RecName: Full=ATP-dependent protease subunit HslV
 gi|242123291|gb|ACS80987.1| 20S proteasome A and B subunits [Desulfovibrio salexigens DSM 2638]
          Length = 179

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 106/179 (59%), Positives = 136/179 (75%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++M  TTIL V+ D    + GDGQV++GQ  VMK +A KVR L    +IAGFAG++ADAF
Sbjct: 1   MEMRGTTILAVKDDKGTAMIGDGQVTMGQAVVMKHSAVKVRTLYNDQVIAGFAGATADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER EKKL+ Y   L+RS+VE+A DWR DK+LR LEAMI++AD    L+I+G GDV+E
Sbjct: 61  TLFERFEKKLKTYSGNLVRSAVEMATDWRTDKFLRKLEAMIMVADAEHILIISGNGDVIE 120

Query: 130 PENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P++GV AIGSGGSYALSAARALM  T   A +IA+K+M IA++ICVYTN + VL+TL+ 
Sbjct: 121 PDDGVAAIGSGGSYALSAARALMRNTDMPAADIAQKSMEIASEICVYTNDHFVLKTLEK 179


>gi|17544762|ref|NP_518164.1| ATP-dependent protease peptidase subunit [Ralstonia solanacearum
           GMI1000]
 gi|21759166|sp|Q8Y3D7|HSLV_RALSO RecName: Full=ATP-dependent protease subunit HslV
 gi|17427051|emb|CAD13571.1| probable atp-dependent protease hslv protein [Ralstonia
           solanacearum GMI1000]
          Length = 178

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 97/176 (55%), Positives = 137/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVR +  G ++ GFAG++ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIYDGKVLVGFAGATADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KL++Y   LLR++V+LAKDWR D+ LR+LEAM+++AD+  TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADRESTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA SAA+ALM +T+ +  ++  K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178


>gi|315289637|gb|EFU49030.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 110-3]
          Length = 164

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 96/159 (60%), Positives = 124/159 (77%), Gaps = 1/159 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 2   VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLI 61

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62  KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ARAL+ +T+ SA EIA KA+ IA DIC+YTNH   +E L
Sbjct: 122 ARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 160


>gi|57167684|ref|ZP_00366824.1| heat shock protein [Campylobacter coli RM2228]
 gi|283956077|ref|ZP_06373564.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|305433191|ref|ZP_07402347.1| ATP-dependent protease HslVU [Campylobacter coli JV20]
 gi|57020806|gb|EAL57470.1| heat shock protein [Campylobacter coli RM2228]
 gi|283792397|gb|EFC31179.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni 1336]
 gi|304443892|gb|EFM36549.1| ATP-dependent protease HslVU [Campylobacter coli JV20]
          Length = 180

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 86/178 (48%), Positives = 120/178 (67%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R+L  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L+     LL+++++ +K+WR DKYLR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + AIGSGG+YALSAARAL        EE+ + ++ IA +IC+YTN NI    ++  
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIAGEICIYTNTNIKTYVIEDE 179


>gi|261491847|ref|ZP_05988426.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261494682|ref|ZP_05991162.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261309647|gb|EEY10870.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261312502|gb|EEY13626.1| ATP-dependent protease peptidase subunit [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 173

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 91/171 (53%), Positives = 125/171 (73%), Gaps = 2/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRKDG V I GDGQ +LG  + K   RKVRRL K  ++ GFAGS+ADAF L +  
Sbjct: 2   TTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++S+VELAK+WR ++ LR LEAM+++A+ +  L+++G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDSEFLLVSGSGDVIEPEQDVL 121

Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG+YA +AA AL+ T+   SA+EI  +A+ IA DI +Y+NH  V+E 
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHKHVIEE 172


>gi|294953411|ref|XP_002787750.1| ATP-dependent protease hslV, putative [Perkinsus marinus ATCC
           50983]
 gi|239902774|gb|EER19546.1| ATP-dependent protease hslV, putative [Perkinsus marinus ATCC
           50983]
          Length = 198

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 110/174 (63%), Positives = 137/174 (78%), Gaps = 1/174 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            +TTILTVRK   VVI GDGQV+LG  ++K N RK+RR+    IIAGFAGS+AD   L++
Sbjct: 22  RSTTILTVRKGPDVVIMGDGQVTLGDMIIKDNVRKLRRINDN-IIAGFAGSTADCLALMD 80

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           +LE KLE++P QLLRS VELAK WR DK LR+L+A+IL+AD+ ITL +TG GDVLE ++G
Sbjct: 81  KLEGKLEEHPQQLLRSCVELAKMWRTDKILRHLQAVILVADENITLEVTGNGDVLEAKDG 140

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           + AIGSGG YAL+AARAL+ T+ +A EI  KAM IAADICV+TNHN  +ETLK 
Sbjct: 141 IFAIGSGGPYALAAARALIDTELTAHEICEKAMKIAADICVHTNHNFAVETLKS 194


>gi|315640717|ref|ZP_07895819.1| heat shock protein HslV [Enterococcus italicus DSM 15952]
 gi|315483472|gb|EFU73966.1| heat shock protein HslV [Enterococcus italicus DSM 15952]
          Length = 180

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 93/175 (53%), Positives = 131/175 (74%), Gaps = 3/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            H+TTI  V KDG   +AGDGQV++G Q VMK  ARKVRR+    ++ GFAGS ADAFTL
Sbjct: 5   FHSTTICAVEKDGKFAMAGDGQVTMGEQIVMKGTARKVRRIYNNQVVVGFAGSVADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ ++   L+++G G+V+ P+
Sbjct: 65  EEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNEKEMLLVSGTGEVIAPD 124

Query: 132 NGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           +G++AIGSGG+YALSAARA+   S   SA+EIA  A++IAADICV+TNHNI++E 
Sbjct: 125 DGILAIGSGGNYALSAARAMKAYSPALSAKEIAENALNIAADICVFTNHNIIVEE 179


>gi|157084475|gb|ABV14153.1| hypothetical protein CKO_03062 [Citrobacter koseri ATCC BAA-895]
          Length = 164

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 95/159 (59%), Positives = 123/159 (77%), Gaps = 1/159 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 2   VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62  KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVIQPENDLIAIGSGGPYAQAA 121

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L
Sbjct: 122 ARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEEL 160


>gi|172057894|ref|YP_001814354.1| ATP-dependent protease peptidase subunit [Exiguobacterium sibiricum
           255-15]
 gi|171990415|gb|ACB61337.1| 20S proteasome A and B subunits [Exiguobacterium sibiricum 255-15]
          Length = 183

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 94/181 (51%), Positives = 131/181 (72%), Gaps = 3/181 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  ++ +G   ++GDGQV+ G   +MK +A+KVRRL  G +IAGFAGS ADAFTL
Sbjct: 2   FHATTIFAIQHNGQSAMSGDGQVTFGNQVIMKKSAKKVRRLYGGKVIAGFAGSVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE Y   L R++VELAK+WR DK LR LEA++L+ D T  L+++G G+V+EP+
Sbjct: 62  FEKFEAKLEMYNGNLQRAAVELAKEWRGDKMLRQLEALLLVMDGTHLLLVSGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           +G++AIGSGG+YAL+A RAL       +AE+IAR A+  A ++CV+TN  I+LET+    
Sbjct: 122 DGILAIGSGGNYALAAGRALARHAGHMTAEQIARAALETAGELCVFTNDQIILETIGGSA 181

Query: 190 E 190
           +
Sbjct: 182 D 182


>gi|300906260|ref|ZP_07123969.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 84-1]
 gi|300401941|gb|EFJ85479.1| ATP-dependent protease HslVU, peptidase subunit [Escherichia coli
           MS 84-1]
          Length = 164

 Score =  161 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 95/159 (59%), Positives = 124/159 (77%), Gaps = 1/159 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KL+ +   L+
Sbjct: 2   VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLKMHQGHLV 61

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62  KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ARAL+ +T+ SA EIA KA+ IA DIC+YTNH   +E L
Sbjct: 122 ARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEEL 160


>gi|291085930|ref|ZP_06354447.2| hypothetical protein CIT292_08924 [Citrobacter youngae ATCC 29220]
 gi|291069632|gb|EFE07741.1| ATP-dependent protease HslVU, peptidase subunit [Citrobacter
           youngae ATCC 29220]
          Length = 164

 Score =  161 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 94/162 (58%), Positives = 122/162 (75%), Gaps = 1/162 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 2   VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62  KAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           ARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L   
Sbjct: 122 ARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEELNSK 163


>gi|25403657|pir||C84997 heat shock protein hslV [imported] - Buchnera sp. (strain APS)
 gi|10039233|dbj|BAB13267.1| heat shock protein hslV [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 170

 Score =  161 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 92/166 (55%), Positives = 126/166 (75%), Gaps = 1/166 (0%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +R    VVI GDGQ +LG T+MK+N +K+R L    +IAGFAG +ADAFTL E  +KKL 
Sbjct: 1   MRLKNKVVIGGDGQATLGNTIMKSNVKKIRSLYHEKVIAGFAGGTADAFTLFEMFDKKLA 60

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
            Y  QL R+++ELAKDWR D+ LR LEA++ +ADK  +L+ITG GDV++PE+ ++AIGSG
Sbjct: 61  MYQGQLQRAAIELAKDWRSDRMLRKLEALLAVADKKTSLIITGNGDVIQPEDDLIAIGSG 120

Query: 141 GSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           GSYA S+ARAL+ +T   A +I RK+++IAA+IC+YTNHN  ++ L
Sbjct: 121 GSYAQSSARALIENTHLDANQIVRKSLNIAANICIYTNHNFTIKEL 166


>gi|86151772|ref|ZP_01069986.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|86153408|ref|ZP_01071612.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121613396|ref|YP_001000363.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|157414939|ref|YP_001482195.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|167005309|ref|ZP_02271067.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315124172|ref|YP_004066176.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|166221636|sp|A1VZ22|HSLV_CAMJJ RecName: Full=ATP-dependent protease subunit HslV
 gi|172047096|sp|A8FL81|HSLV_CAMJ8 RecName: Full=ATP-dependent protease subunit HslV
 gi|85841401|gb|EAQ58649.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni 260.94]
 gi|85843134|gb|EAQ60345.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87249439|gb|EAQ72399.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|157385903|gb|ABV52218.1| putative heat shock protein [Campylobacter jejuni subsp. jejuni
           81116]
 gi|284925921|gb|ADC28273.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
           subsp. jejuni IA3902]
 gi|307747578|gb|ADN90848.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni M1]
 gi|315017894|gb|ADT65987.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. jejuni ICDCCJ07001]
 gi|315931860|gb|EFV10815.1| ATP-dependent protease hslV [Campylobacter jejuni subsp. jejuni
           327]
          Length = 180

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 86/178 (48%), Positives = 120/178 (67%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R+L  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKLNNGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L+     LL+++++ +K+WR DKYLR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + AIGSGG+YALSAARAL        EE+ + ++ IA +IC+YTN NI    ++  
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHASLDEEELVKSSLQIAGEICIYTNTNIKTYVIEDE 179


>gi|260655110|ref|ZP_05860598.1| ATP-dependent protease HslVU, peptidase subunit [Jonquetella
           anthropi E3_33 E1]
 gi|260630221|gb|EEX48415.1| ATP-dependent protease HslVU, peptidase subunit [Jonquetella
           anthropi E3_33 E1]
          Length = 186

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 96/186 (51%), Positives = 137/186 (73%), Gaps = 1/186 (0%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M  + +      +H TTI+ VRKDG V +AGDGQ+++G  ++KA   KVRRL K +++ G
Sbjct: 1   MTTLANGTAFEPIHGTTIVCVRKDGSVAMAGDGQMTMGSQILKAGTVKVRRLYKDSVLVG 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAG++ADA TL++ L+KKLE+Y   LLR++VEL K WR D+ LR+LEAM+L AD+  T++
Sbjct: 61  FAGTTADAMTLMDLLDKKLEEYSGNLLRAAVELTKTWRTDRMLRHLEAMMLAADREHTVL 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHN 179
           I+G GDV+EPEN V AIGSGG +AL+A+RALM  +   A++IA  A+ IA++IC+YT+  
Sbjct: 121 ISGAGDVVEPENDVAAIGSGGGFALAASRALMMGSSYDAKKIAETAIRIASEICIYTDDK 180

Query: 180 IVLETL 185
           I +E L
Sbjct: 181 ITVEVL 186


>gi|115379319|ref|ZP_01466428.1| ATP-dependent protease HslV [Stigmatella aurantiaca DW4/3-1]
 gi|115363664|gb|EAU62790.1| ATP-dependent protease HslV [Stigmatella aurantiaca DW4/3-1]
          Length = 166

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 100/166 (60%), Positives = 133/166 (80%), Gaps = 1/166 (0%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +R++G VVIAGDGQVSL +T+MK  A+KVRR+G+GN++AGFAGS+ADAFTL ER E KL+
Sbjct: 1   MRREGKVVIAGDGQVSLDKTIMKNTAKKVRRIGEGNVLAGFAGSTADAFTLFERFEAKLK 60

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
           ++   L R+ VEL KDWR D++LR LEA++++AD+  T +++G GDV+EP++G+ A+GSG
Sbjct: 61  EHQKNLARACVELGKDWRTDRFLRRLEALLIVADREKTFILSGAGDVIEPDHGIAAVGSG 120

Query: 141 GSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           G YALSAARAL   T  SA EIA  AM+IAADICVYTN ++  E L
Sbjct: 121 GHYALSAARALQAHTSLSAREIATHAMAIAADICVYTNSHVTFEEL 166


>gi|225025432|ref|ZP_03714624.1| hypothetical protein EIKCOROL_02330 [Eikenella corrodens ATCC
           23834]
 gi|224941716|gb|EEG22925.1| hypothetical protein EIKCOROL_02330 [Eikenella corrodens ATCC
           23834]
          Length = 177

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 98/175 (56%), Positives = 132/175 (75%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI++VR+ G V I GDGQVSLG T++KA ARKVR+L    ++AGFAG +ADAFTL
Sbjct: 3   QFDGTTIVSVRRGGQVAIGGDGQVSLGNTIIKATARKVRKLYNNTVLAGFAGGTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +E  E KL+++  +L  S++ELAK+WR D+ LR LEAM+++ADK  TL+ITG GDVLEPE
Sbjct: 63  IELFEAKLQKHQGRLTVSAIELAKEWRTDRALRRLEAMLIVADKDNTLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            G+ AIGSGG++A +AARALM +T+   E + +KA+ IA  IC+YTN    +ETL
Sbjct: 123 GGIAAIGSGGAFAQAAARALMENTELPPETVVKKALEIAGSICIYTNDQHTVETL 177


>gi|257867812|ref|ZP_05647465.1| 20S proteasome protein [Enterococcus casseliflavus EC30]
 gi|257874139|ref|ZP_05653792.1| 20S proteasome protein [Enterococcus casseliflavus EC10]
 gi|257876704|ref|ZP_05656357.1| 20S proteasome protein [Enterococcus casseliflavus EC20]
 gi|325570910|ref|ZP_08146559.1| heat shock protein HslV [Enterococcus casseliflavus ATCC 12755]
 gi|257801895|gb|EEV30798.1| 20S proteasome protein [Enterococcus casseliflavus EC30]
 gi|257808303|gb|EEV37125.1| 20S proteasome protein [Enterococcus casseliflavus EC10]
 gi|257810870|gb|EEV39690.1| 20S proteasome protein [Enterococcus casseliflavus EC20]
 gi|325156314|gb|EGC68497.1| heat shock protein HslV [Enterococcus casseliflavus ATCC 12755]
          Length = 180

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 93/176 (52%), Positives = 131/176 (74%), Gaps = 3/176 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + H+TTI  V KDG   +AGDGQV++G Q VMK  ARKVRR+  G +I GFAGS ADAFT
Sbjct: 4   EFHSTTICAVEKDGKFAMAGDGQVTMGEQVVMKGTARKVRRIYNGEVIVGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ +    L+++G G+V+ P
Sbjct: 64  LEEKFEGKLNEYNGNLQRAAVELAQEWRTQQSMQKLEAMLIVMNDKEMLLVSGTGEVISP 123

Query: 131 ENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
           + G++AIGSGG+YAL+AARA+     + SA+EIA  A++IAADICV+TNHNI++E 
Sbjct: 124 DEGILAIGSGGNYALAAARAMKRYGGELSAKEIAEGALNIAADICVFTNHNIIVEE 179


>gi|124268573|ref|YP_001022577.1| ATP-dependent protease peptidase subunit [Methylibium
           petroleiphilum PM1]
 gi|166222986|sp|A2SLA3|HSLV_METPP RecName: Full=ATP-dependent protease subunit HslV
 gi|124261348|gb|ABM96342.1| putative heat shock protein [Methylibium petroleiphilum PM1]
          Length = 185

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 90/179 (50%), Positives = 127/179 (70%), Gaps = 1/179 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             H TTIL+VR+   V + GDGQV+LG  V+KA+ARKVRRL K  ++AGFAG++ADAFTL
Sbjct: 3   SYHGTTILSVRRGREVALGGDGQVTLGSIVVKASARKVRRLYKEQVLAGFAGATADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   L+R++++L +DWR D+ LR LEAM+ +AD+  +L+ITG GDVLEPE
Sbjct: 63  FERFEGKLEKHQGNLVRAAIDLTRDWRTDRVLRRLEAMLAVADRDTSLIITGNGDVLEPE 122

Query: 132 NGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           +G++AIGSGG     +A   L  T     E+ +K++ IA D+C+YTN +  +E L   +
Sbjct: 123 HGIVAIGSGGAYAQAAARALLAHTTLGPAEMVKKSLEIAGDLCIYTNQHHTIEVLTDPE 181


>gi|299068384|emb|CBJ39608.1| peptidase component of the HslUV protease [Ralstonia solanacearum
           CMR15]
          Length = 178

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 97/176 (55%), Positives = 136/176 (77%), Gaps = 1/176 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + H TTI++VR+   V + GDGQV+LG  VMK  ARKVR +  G ++ GFAG++ADAF+L
Sbjct: 3   QYHGTTIVSVRRGNQVALGGDGQVTLGNIVMKGTARKVRTIFDGKVLVGFAGATADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E KL++Y   LLR++V+LAKDWR D+ LR+LEAM+++AD   TLVITG GDVL+PE
Sbjct: 63  LDRFEAKLQKYQGHLLRAAVDLAKDWRTDRALRHLEAMLIVADHESTLVITGNGDVLDPE 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            G+ AIGSGG+YA SAA+ALM +T+ +  ++  K++ IA ++C+YTN N V+ETL+
Sbjct: 123 GGIAAIGSGGAYAQSAAKALMENTELAPRDVVEKSLRIAGELCIYTNTNFVIETLE 178


>gi|218288288|ref|ZP_03492587.1| 20S proteasome A and B subunits [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218241647|gb|EED08820.1| 20S proteasome A and B subunits [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 181

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 91/179 (50%), Positives = 126/179 (70%), Gaps = 2/179 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
            +MH TTI  + +DG   +AGDGQV+ G   VMK  ARKVRRL    ++AGFAGS ADAF
Sbjct: 3   YEMHGTTIFAMLRDGRGAMAGDGQVTFGNNMVMKRGARKVRRLYHDRVVAGFAGSVADAF 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ EKKL+++   L R++VELAK+WR DK L+ LEAM+++ D    L+++G G+V++
Sbjct: 63  TLFEKFEKKLDEFQGNLPRAAVELAKEWRSDKILQKLEAMLIVMDARDLLIVSGGGEVIQ 122

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P++G+ AIGSGG Y   +      +TQ    EIA++A+ IA++ICVYTN  IVLET+ V
Sbjct: 123 PDDGICAIGSGGGYALAAGRALARNTQLEPAEIAKQALIIASEICVYTNDQIVLETVGV 181


>gi|303249979|ref|ZP_07336181.1| ATP-dependent protease peptidase subunit [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307251033|ref|ZP_07532957.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307253409|ref|ZP_07535280.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302651042|gb|EFL81196.1| ATP-dependent protease peptidase subunit [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306856863|gb|EFM88995.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306859088|gb|EFM91130.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 173

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 91/171 (53%), Positives = 126/171 (73%), Gaps = 2/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRKD  V I GDGQ +LG  V K   RKVRR+ K  ++ GFAGS+ADAF L +  
Sbjct: 2   TTIVCVRKDSKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++S+VELAK+WR ++ LR LEAM+++A+++  L+++G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121

Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG+YA +AA AL+ T+   SA+EI  +A+ IA DI +Y+NHN V+E 
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNHNHVIEE 172


>gi|160866756|gb|ABX23379.1| hypothetical protein SARI_03564 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 164

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 95/162 (58%), Positives = 123/162 (75%), Gaps = 1/162 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 2   VIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 62  KAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAA 121

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           ARAL+ +T+  A EIA KA+ IA DIC+YTNH   +E L   
Sbjct: 122 ARALLENTELGAREIAEKALDIAGDICIYTNHFHTIEELTSK 163


>gi|307246665|ref|ZP_07528735.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307255650|ref|ZP_07537454.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307260101|ref|ZP_07541812.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306852365|gb|EFM84600.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306861327|gb|EFM93317.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865835|gb|EFM97712.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 173

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 91/171 (53%), Positives = 125/171 (73%), Gaps = 2/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRKD  V I GDGQ +LG  V K   RKVRR+ K  ++ GFAGS+ADAF L +  
Sbjct: 2   TTIVCVRKDSKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++S+VELAK+WR ++ LR LEAM+++A+++  L+++G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLIKSAVELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVL 121

Query: 136 AIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG+YA +AA AL+ T    SA+EI  +A+ IA DI +Y+NHN V+E 
Sbjct: 122 AIGSGGNYAKAAALALLRTQNNLSAKEIVAEALKIAGDIDIYSNHNHVIEE 172


>gi|221633580|ref|YP_002522806.1| ATP-dependent protease peptidase subunit [Thermomicrobium roseum
           DSM 5159]
 gi|221156008|gb|ACM05135.1| heat shock protein HslV [Thermomicrobium roseum DSM 5159]
          Length = 197

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 95/172 (55%), Positives = 122/172 (70%), Gaps = 1/172 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTIL V +DG V IAGDGQV+ G  V+K  ARK+R L  G ++AGFAG+ ADA TL E
Sbjct: 8   HGTTILGVLRDGRVAIAGDGQVTAGDVVLKHRARKIRALAGGKVLAGFAGAVADALTLFE 67

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           + E+ L      L R++VELAK+WR D+YLR LEA +L+AD    L+I+G GDV+EP++G
Sbjct: 68  KFEQHLRTADGDLRRAAVELAKEWRSDRYLRRLEAQLLVADPRQLLMISGDGDVIEPDDG 127

Query: 134 VMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V AIG+GG Y A +A   L  T+ SA EIAR AM +AAD+CVYTNH + + T
Sbjct: 128 VAAIGTGGPYAAAAARALLRHTRMSAAEIARAAMEVAADLCVYTNHAVTILT 179


>gi|254360689|ref|ZP_04976838.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica PHL213]
 gi|1346417|sp|P49617|HSLV_PASHA RecName: Full=ATP-dependent protease subunit HslV; AltName:
           Full=Protein lapC
 gi|387856|gb|AAA25533.1| membrane protein [Mannheimia haemolytica]
 gi|153091229|gb|EDN73234.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Mannheimia haemolytica PHL213]
          Length = 173

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 91/171 (53%), Positives = 126/171 (73%), Gaps = 2/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ VRKDG V I GDGQ +LG  + K   RKVRRL K  ++ GFAGS+ADAF L +  
Sbjct: 2   TTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVVTGFAGSTADAFILRDLF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLE +   L++S+VELAK+WR ++ LR LEAM+++A+ +  L+++G GDV+EPE  V+
Sbjct: 62  EKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDSEFLLVSGSGDVIEPEQDVL 121

Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLET 184
           AIGSGG+YA +AA AL+ T+   SA+EI  +A+ IA DI +Y+N+N V+E 
Sbjct: 122 AIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDIDIYSNYNHVIEE 172


>gi|121611468|ref|YP_999275.1| ATP-dependent protease peptidase subunit [Verminephrobacter
           eiseniae EF01-2]
 gi|189036250|sp|A1WRK0|HSLV_VEREI RecName: Full=ATP-dependent protease subunit HslV
 gi|121556108|gb|ABM60257.1| HslV component of HslUV peptidase. Threonine peptidase. MEROPS
           family T01B [Verminephrobacter eiseniae EF01-2]
          Length = 179

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 93/178 (52%), Positives = 126/178 (70%), Gaps = 5/178 (2%)

Query: 13  MHATTILTVRKDG----VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            H TTIL+VR+       V I GDGQV+LG  V+K  ARKVR+L  G ++AGFAG++ADA
Sbjct: 2   FHGTTILSVRRQTPQGVQVAIGGDGQVTLGAIVVKGTARKVRKLHHGKVLAGFAGATADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           FTL ER E KL+++   L+RS++EL KDWR D+ LR LEAM+ +AD+  +L+ITG GDVL
Sbjct: 62  FTLFERFEAKLDKHQGHLVRSAIELTKDWRTDRVLRRLEAMLAVADQESSLIITGNGDVL 121

Query: 129 EPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EPE G++AIGSGG     +A   L  T  SA +I ++A+ IA ++C+YTN +  +ETL
Sbjct: 122 EPEQGIIAIGSGGAYANAAAKALLNHTDLSAADIVKQALEIAGELCIYTNMHHTIETL 179


>gi|153952111|ref|YP_001398381.1| ATP-dependent protease peptidase subunit [Campylobacter jejuni
           subsp. doylei 269.97]
 gi|166221635|sp|A7H4F1|HSLV_CAMJD RecName: Full=ATP-dependent protease subunit HslV
 gi|152939557|gb|ABS44298.1| ATP-dependent protease HslVU, HslV subunit [Campylobacter jejuni
           subsp. doylei 269.97]
          Length = 180

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 86/178 (48%), Positives = 120/178 (67%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R+L  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAIKIRKLNNGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L+     LL+++++ +K+WR DKYLR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFENLLQSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + AIGSGG+YALSAARAL        EE+ + ++ IA +IC+YTN NI    ++  
Sbjct: 122 GQIAAIGSGGNYALSAARALAKHANLDEEELVKSSLQIAGEICIYTNTNIKTYVIEDE 179


>gi|258404688|ref|YP_003197430.1| ATP-dependent protease peptidase subunit [Desulfohalobium retbaense
           DSM 5692]
 gi|257796915|gb|ACV67852.1| 20S proteasome A and B subunits [Desulfohalobium retbaense DSM
           5692]
          Length = 181

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 102/175 (58%), Positives = 132/175 (75%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +  TTIL VR+   V +AGDGQV++GQ V  K  ARKVRR+  G I+AGFAGS+ADAFTL
Sbjct: 5   LRGTTILAVRRGDGVAMAGDGQVTMGQAVALKHTARKVRRMYHGKIVAGFAGSTADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ER E KLE++   LLRSSVELAK+WR DKYLR LEAM+++AD     V+TG GDV+EP+
Sbjct: 65  FERFEAKLEEFRGNLLRSSVELAKEWRTDKYLRRLEAMLVVADAENIFVLTGTGDVIEPD 124

Query: 132 NGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +GV+ IGSGGSY   +A   L  ++  A++IA +AM IAA++CVYTN ++VLET+
Sbjct: 125 DGVVGIGSGGSYALAAARALLRHSELPAKDIAEQAMHIAAELCVYTNDSLVLETI 179


>gi|289523580|ref|ZP_06440434.1| ATP-dependent protease HslVU, peptidase subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503272|gb|EFD24436.1| ATP-dependent protease HslVU, peptidase subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 178

 Score =  160 bits (405), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 90/177 (50%), Positives = 129/177 (72%), Gaps = 1/177 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI+ VR+   V +AGDGQV+L   ++K  A+KVRRL  GN++AGFAGS+ADA TLL
Sbjct: 2   FKGTTIICVRRGDEVAMAGDGQVTLEHQIIKNGAKKVRRLVGGNVLAGFAGSTADAMTLL 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E+ LE +   L+R++V+L K+WR DK LR LEAM+L+AD   TL+++G GDVLEP++
Sbjct: 62  ERFERYLEGHSGNLMRAAVDLVKEWRTDKALRRLEAMMLVADLRQTLLLSGAGDVLEPDS 121

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            V +IGSG  +AL+AA+A +  +   A EIA++++ IA+++C+YTN  I LE +K  
Sbjct: 122 DVASIGSGSGFALAAAKAFIEVSDMGAGEIAKRSLQIASELCIYTNDIITLEVIKGE 178


>gi|313901987|ref|ZP_07835403.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467776|gb|EFR63274.1| ATP dependent peptidase CodWX, CodW component [Thermaerobacter
           subterraneus DSM 13965]
          Length = 182

 Score =  160 bits (405), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 94/176 (53%), Positives = 128/176 (72%), Gaps = 2/176 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + H TTIL VR++G V +AGDGQV+L Q  VMK  ARKVRRL  G ++AGFAGS ADA  
Sbjct: 7   RFHGTTILAVRRNGRVAMAGDGQVTLQQHMVMKHRARKVRRLYHGRVLAGFAGSVADAVA 66

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L+ER E KLE++  QL+R++VELAKDWR D+ LR LEA++++AD    L+++G G+VLEP
Sbjct: 67  LMERFEGKLEEHGGQLVRAAVELAKDWRTDRLLRRLEALLVVADADHLLLVSGSGEVLEP 126

Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++A+GSGG +   +A      T   A  I R+AM IAA++CVYTN  +V+E L
Sbjct: 127 DDGIVAVGSGGGFALAAARALARHTGLDAAAICREAMRIAAELCVYTNDQLVIEEL 182


>gi|221061613|ref|XP_002262376.1| Heat shock protein hslv [Plasmodium knowlesi strain H]
 gi|193811526|emb|CAQ42254.1| Heat shock protein hslv, putative [Plasmodium knowlesi strain H]
          Length = 208

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 99/173 (57%), Positives = 131/173 (75%), Gaps = 2/173 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTIL VRK+  V + GDG VS G  ++K NA+K+RRL    I+ GFAG++AD FTLL+
Sbjct: 37  HGTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRLKDN-ILMGFAGATADCFTLLD 95

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           + E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK + L +TG GDVLEP   
Sbjct: 96  KFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDVLLEVTGNGDVLEPSGN 155

Query: 134 VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+  GSGG YA++AARAL      SA++IA KAM+IAAD+C +TN+N + ETL
Sbjct: 156 VLGTGSGGPYAIAAARALYDVENLSAKDIAYKAMNIAADMCCHTNNNFICETL 208


>gi|145219767|ref|YP_001130476.1| ATP-dependent protease peptidase subunit [Prosthecochloris
           vibrioformis DSM 265]
 gi|189036231|sp|A4SER5|HSLV_PROVI RecName: Full=ATP-dependent protease subunit HslV
 gi|145205931|gb|ABP36974.1| 20S proteasome, A and B subunits [Chlorobium phaeovibrioides DSM
           265]
          Length = 182

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 94/182 (51%), Positives = 133/182 (73%), Gaps = 2/182 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M     + ++ +TT++ V +DG   +  DGQ++LG TV+K + RK+R L +G ++AGFAG
Sbjct: 1   MKHSEES-RIRSTTVIGVLRDGKAALGSDGQMTLGNTVVKHSTRKIRSLYQGRLLAGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TLL+R E+KLE Y  +L R++VELA+DWR DKYLR LEAM+ I      L+I+G
Sbjct: 60  ATADALTLLDRFEEKLEAYNGKLERAAVELARDWRTDKYLRRLEAMLAIVSSEKALIISG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+EPE+G++AIGSG  YAL+AARALM  T   A EI ++++  AADIC+YTN +IV+
Sbjct: 120 TGDVIEPEDGIVAIGSGSMYALAAARALMKHTGLHAGEIVQESLRTAADICIYTNDHIVV 179

Query: 183 ET 184
           E 
Sbjct: 180 EE 181


>gi|259046719|ref|ZP_05737120.1| heat shock protein HslV [Granulicatella adiacens ATCC 49175]
 gi|259036615|gb|EEW37870.1| heat shock protein HslV [Granulicatella adiacens ATCC 49175]
          Length = 176

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 84/174 (48%), Positives = 128/174 (73%), Gaps = 4/174 (2%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  V+KD  V +AGDGQV++G+  +MK  ARK+RR+    ++ GFAG  ADA TL E 
Sbjct: 2   TTICAVKKDNQVAMAGDGQVTMGEKVIMKGTARKIRRIFDNQVLVGFAGGVADAITLEEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            E KL+Q+   L R+++E+AK WR D+ L+ LEAM+++ +K   L+++G G+V+EP++G+
Sbjct: 62  FEDKLKQFKGNLQRAAIEMAKQWRSDRGLQKLEAMLIVMNKEQVLLVSGTGEVIEPDDGI 121

Query: 135 MAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + IGSGG+YALSAAR L+    +  +AE+IAR+++ IA++I ++TN NI+ ETL
Sbjct: 122 LTIGSGGNYALSAARGLLRFGDSNLTAEDIARESLKIASEIDIFTNDNIITETL 175


>gi|1448947|gb|AAB04621.1| heat shock protein [Borrelia burgdorferi]
          Length = 182

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 90/182 (49%), Positives = 133/182 (73%), Gaps = 4/182 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ ++K+G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MSFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K+++  +    + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKIKRKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +EPE  V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180

Query: 187 VG 188
             
Sbjct: 181 NE 182


>gi|293393522|ref|ZP_06637832.1| ATP-dependent protease HslVU [Serratia odorifera DSM 4582]
 gi|291423857|gb|EFE97076.1| ATP-dependent protease HslVU [Serratia odorifera DSM 4582]
          Length = 164

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 91/159 (57%), Positives = 120/159 (75%), Gaps = 1/159 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           VI GDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 2   VIGGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLV 61

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++AIGSGG YA SA
Sbjct: 62  KAAVELAKDWRTDRMLRRLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQSA 121

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ARAL+ +T   A +I  K++ IA DIC+YTNH + +E L
Sbjct: 122 ARALLENTDLGARDIVEKSLGIAGDICIYTNHFLTIEEL 160


>gi|156103401|ref|XP_001617393.1| heat shock protein hslv [Plasmodium vivax SaI-1]
 gi|148806267|gb|EDL47666.1| heat shock protein hslv, putative [Plasmodium vivax]
          Length = 207

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 99/173 (57%), Positives = 131/173 (75%), Gaps = 2/173 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTIL VRK+  V + GDG VS G  ++K NA+K+RRL    I+ GFAG++AD FTLL+
Sbjct: 36  HGTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRLKDN-ILMGFAGATADCFTLLD 94

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           + E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK + L +TG GDVLEP   
Sbjct: 95  KFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDVLLEVTGNGDVLEPSGN 154

Query: 134 VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+  GSGG YA++AARAL      SA++IA KAM+IAAD+C +TN+N + ETL
Sbjct: 155 VLGTGSGGPYAIAAARALYDVENLSAKDIAYKAMNIAADMCCHTNNNFICETL 207


>gi|224533762|ref|ZP_03674350.1| ATP-dependent protease HslV [Borrelia burgdorferi CA-11.2a]
 gi|224513055|gb|EEF83418.1| ATP-dependent protease HslV [Borrelia burgdorferi CA-11.2a]
          Length = 182

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 91/182 (50%), Positives = 132/182 (72%), Gaps = 4/182 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ ++K+G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MSFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K++   +    + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +EPE  V++IGSGG+YA SAA A M + + SA E+A K++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALKSLKIAARVCIYTNSNIVLEEIE 180

Query: 187 VG 188
             
Sbjct: 181 NE 182


>gi|224532185|ref|ZP_03672817.1| ATP-dependent protease HslV [Borrelia valaisiana VS116]
 gi|224511650|gb|EEF82056.1| ATP-dependent protease HslV [Borrelia valaisiana VS116]
          Length = 182

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 91/182 (50%), Positives = 133/182 (73%), Gaps = 4/182 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ ++K+G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MDFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGRILAGFAGSTSDAIT 60

Query: 71  LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K++   +    + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +EPE  V++IGSGG+YA SAA A M + + SA E+AR+++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVARRSLKIAARVCIYTNSNIVLEEIE 180

Query: 187 VG 188
             
Sbjct: 181 NE 182


>gi|87309984|ref|ZP_01092117.1| ATP-dependent protease peptidase subunit [Blastopirellula marina
           DSM 3645]
 gi|87287230|gb|EAQ79131.1| ATP-dependent protease peptidase subunit [Blastopirellula marina
           DSM 3645]
          Length = 180

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 91/179 (50%), Positives = 134/179 (74%), Gaps = 1/179 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +K+ +TTILTVR +G V I GDGQV++  +VMK++A K+R L  G +I GFAGS+ADAF+
Sbjct: 1   MKIRSTTILTVRHNGRVAIGGDGQVTMNSSVMKSDAHKIRPLLGGKVICGFAGSTADAFS 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLER E KL+ YPN + +++ ELAK+WR D+ +R LEA++ + +   T +I+G GDV+ P
Sbjct: 61  LLERFEGKLKDYPNNVPKAATELAKEWRTDRAMRRLEALMTVINGEHTFLISGTGDVIAP 120

Query: 131 ENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            +GV+ IGSGG YA++AARAL++    SA+EI + A+ IAA I +YTN NI++E+++  
Sbjct: 121 TDGVLGIGSGGDYAVAAARALVNHSVLSADEIVKAALQIAAGIDIYTNDNIMVESMESQ 179


>gi|323339877|ref|ZP_08080146.1| heat shock protein HslV [Lactobacillus ruminis ATCC 25644]
 gi|323092750|gb|EFZ35353.1| heat shock protein HslV [Lactobacillus ruminis ATCC 25644]
          Length = 180

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 90/179 (50%), Positives = 130/179 (72%), Gaps = 3/179 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADA 68
           A+  HATTI  VR +G   +AGDGQV++G+  +MK  A KVR++  G ++ GFAGS ADA
Sbjct: 2   AISFHATTICAVRHNGKTAMAGDGQVTMGEKVIMKGTAHKVRKIYDGKVVVGFAGSVADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F L +R EKKL QY   L R++VELA++WR D+ L+ LEA++++ D    L+++G G+V+
Sbjct: 62  FNLEDRFEKKLNQYSGNLQRAAVELAQEWRSDQALQKLEALLIVMDAKNLLLVSGSGEVI 121

Query: 129 EPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EP++ V+AIGSGG+YAL+AA+A+   +   SA EIA+ A+ IA DI ++TNHNI+ E L
Sbjct: 122 EPDDDVLAIGSGGNYALAAAKAMTKYADGMSAAEIAKAAIGIAGDIDIFTNHNIICEEL 180


>gi|255322167|ref|ZP_05363313.1| ATP-dependent protease HslV [Campylobacter showae RM3277]
 gi|255300540|gb|EET79811.1| ATP-dependent protease HslV [Campylobacter showae RM3277]
          Length = 177

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 89/176 (50%), Positives = 121/176 (68%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R++  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKIHGGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  LE     LL++ +E +K+WR DKYLR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFENNLEHAKGDLLKAVIEFSKEWRKDKYLRKLEAMMLVLDREKIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             + AIGSGG+YALSAARAL    Q   EE+ ++++ IA +IC+YTN NI    L+
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFAQIDEEELVKESLKIAGEICIYTNTNIKTYVLE 177


>gi|301063917|ref|ZP_07204392.1| ATP-dependent protease HslVU, peptidase subunit [delta
           proteobacterium NaphS2]
 gi|300441992|gb|EFK06282.1| ATP-dependent protease HslVU, peptidase subunit [delta
           proteobacterium NaphS2]
          Length = 187

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 98/179 (54%), Positives = 130/179 (72%), Gaps = 1/179 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ ATT+L VRK+G  VI GDGQV+LG T+MK NA KVRR+ +  ++AGFAG++ADAF L
Sbjct: 8   KIRATTVLAVRKNGRCVIGGDGQVTLGDTIMKHNATKVRRMYQDTVLAGFAGAAADAFNL 67

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            ERLE KLE Y   L++++VELAKDWR DK LR LEA++L AD+   L+I+G GDV+EP+
Sbjct: 68  FERLEGKLESYGGNLVKAAVELAKDWRTDKILRKLEALLLAADEQHMLIISGTGDVIEPD 127

Query: 132 NGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
             V AIGSGG YA +AA+AL + +   A+ I   ++ IAA IC+YTN +I +  L   D
Sbjct: 128 MSVAAIGSGGPYAQAAAQALTLHSDLEAKAIVEASLKIAASICLYTNEHITVLELNDDD 186


>gi|222823761|ref|YP_002575335.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Campylobacter lari RM2100]
 gi|254802408|sp|B9KG99|HSLV_CAMLR RecName: Full=ATP-dependent protease subunit HslV
 gi|222538983|gb|ACM64084.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Campylobacter lari RM2100]
          Length = 180

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 86/178 (48%), Positives = 120/178 (67%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R+L  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSFGNTVLKNNAVKIRKLNNGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  EK L      LL+++++ +K+WR DKYLR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFEKLLSSSKGDLLKAAIDFSKEWRKDKYLRKLEAMMLVLDRNHIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + AIGSGG+YALSAARAL        E + ++++ IA +IC+YTN NI    ++  
Sbjct: 122 GAIAAIGSGGNYALSAARALAKHSNLDEENLVKESLQIAGEICIYTNTNIKTYVIEDD 179


>gi|323144076|ref|ZP_08078719.1| ATP-dependent protease HslVU, peptidase subunit [Succinatimonas
           hippei YIT 12066]
 gi|322416152|gb|EFY06843.1| ATP-dependent protease HslVU, peptidase subunit [Succinatimonas
           hippei YIT 12066]
          Length = 175

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 87/173 (50%), Positives = 128/173 (73%), Gaps = 2/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI++VR++ VV + GDGQV++G  +V+KANA KVRRL KG +IAGFAGS+ADAFTLL+ 
Sbjct: 2   TTIVSVRRNNVVAVGGDGQVTMGQSSVLKANAVKVRRLFKGKVIAGFAGSTADAFTLLDL 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            E KLE++   L R+ V L K+WR D+ LR LEA++++ADK  + +++G GDV+  ++ +
Sbjct: 62  FESKLEEHQGILERACVALVKNWRTDRALRKLEAILIVADKNASFLVSGTGDVVRMDDDI 121

Query: 135 MAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +A GSGG+Y   +A   + +T   A+ I +K++ IA DICVYTN N V+ET++
Sbjct: 122 LATGSGGNYALAAARALVANTDLDAKTIVKKSLEIAGDICVYTNQNHVIETIE 174


>gi|332528829|ref|ZP_08404803.1| ATP-dependent protease subunit HslV [Hylemonella gracilis ATCC
           19624]
 gi|332041688|gb|EGI78040.1| ATP-dependent protease subunit HslV [Hylemonella gracilis ATCC
           19624]
          Length = 168

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 87/165 (52%), Positives = 121/165 (73%), Gaps = 1/165 (0%)

Query: 26  VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQ 85
            V I GDGQV+LG  V+K  ARKVR+L  G ++AGFAG++ADAFTL ER E KL+++   
Sbjct: 2   QVAIGGDGQVTLGHIVVKGTARKVRKLHHGKVLAGFAGATADAFTLFERFEAKLDKHQGH 61

Query: 86  LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSY-A 144
           L R+++EL +DWR D+ LR LEAM+ +AD   +L+I+G GDVLEPE+GV+AIGSGG+Y  
Sbjct: 62  LQRAAIELTRDWRTDRVLRRLEAMLAVADLESSLIISGNGDVLEPEHGVVAIGSGGAYAQ 121

Query: 145 LSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
            +A   L  TQ  A+EI ++++ IA +IC+YTN N  +E L+ G+
Sbjct: 122 SAAIALLKHTQLDAKEIVKQSLEIAGEICIYTNMNHTIEVLEAGE 166


>gi|255961281|ref|YP_346130.3| ATP-dependent protease peptidase subunit [Pseudomonas fluorescens
           Pf0-1]
 gi|77380628|gb|ABA72141.1| ATP-dependent protease hslV [Pseudomonas fluorescens Pf0-1]
          Length = 192

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 18  TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 77

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 78  EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 137

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG+YA +AA AL+  T  SA EI   A+ IA DICV+TNH   +E   + +
Sbjct: 138 AMGSGGAYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHTQTIEEQDLAE 192


>gi|15594641|ref|NP_212430.1| ATP-dependent protease peptidase subunit [Borrelia burgdorferi B31]
 gi|195941350|ref|ZP_03086732.1| ATP-dependent protease peptidase subunit [Borrelia burgdorferi 80a]
 gi|216264430|ref|ZP_03436422.1| ATP-dependent protease HslV [Borrelia burgdorferi 156a]
 gi|218249363|ref|YP_002374819.1| ATP-dependent protease HslV [Borrelia burgdorferi ZS7]
 gi|221217712|ref|ZP_03589180.1| ATP-dependent protease HslV [Borrelia burgdorferi 72a]
 gi|223888893|ref|ZP_03623484.1| ATP-dependent protease HslV [Borrelia burgdorferi 64b]
 gi|224533183|ref|ZP_03673783.1| ATP-dependent protease HslV [Borrelia burgdorferi WI91-23]
 gi|225549025|ref|ZP_03770000.1| ATP-dependent protease HslV [Borrelia burgdorferi 94a]
 gi|225550114|ref|ZP_03771074.1| ATP-dependent protease HslV [Borrelia burgdorferi 118a]
 gi|225552106|ref|ZP_03773046.1| ATP-dependent protease HslV [Borrelia sp. SV1]
 gi|226320597|ref|ZP_03796157.1| ATP-dependent protease HslV [Borrelia burgdorferi 29805]
 gi|226321614|ref|ZP_03797140.1| ATP-dependent protease HslV [Borrelia burgdorferi Bol26]
 gi|3913882|sp|Q57209|HSLV_BORBU RecName: Full=ATP-dependent protease subunit HslV
 gi|226704537|sp|B7J1M4|HSLV_BORBZ RecName: Full=ATP-dependent protease subunit HslV
 gi|1165280|gb|AAA85619.1| HsLV [Borrelia burgdorferi]
 gi|1196313|gb|AAB51405.1| heat shock response protein [Borrelia burgdorferi]
 gi|1234879|emb|CAA65467.1| heat shock protein [Borrelia burgdorferi]
 gi|2688170|gb|AAC66652.1| heat shock protein (hslV) [Borrelia burgdorferi B31]
 gi|215980903|gb|EEC21710.1| ATP-dependent protease HslV [Borrelia burgdorferi 156a]
 gi|218164551|gb|ACK74612.1| ATP-dependent protease HslV [Borrelia burgdorferi ZS7]
 gi|221192389|gb|EEE18608.1| ATP-dependent protease HslV [Borrelia burgdorferi 72a]
 gi|223885709|gb|EEF56808.1| ATP-dependent protease HslV [Borrelia burgdorferi 64b]
 gi|224511910|gb|EEF82311.1| ATP-dependent protease HslV [Borrelia burgdorferi WI91-23]
 gi|225369226|gb|EEG98679.1| ATP-dependent protease HslV [Borrelia burgdorferi 118a]
 gi|225370251|gb|EEG99689.1| ATP-dependent protease HslV [Borrelia burgdorferi 94a]
 gi|225371104|gb|EEH00534.1| ATP-dependent protease HslV [Borrelia sp. SV1]
 gi|226232803|gb|EEH31556.1| ATP-dependent protease HslV [Borrelia burgdorferi Bol26]
 gi|226234016|gb|EEH32737.1| ATP-dependent protease HslV [Borrelia burgdorferi 29805]
 gi|312148445|gb|ADQ31104.1| ATP-dependent protease HslV [Borrelia burgdorferi JD1]
 gi|312148992|gb|ADQ29063.1| ATP-dependent protease HslV [Borrelia burgdorferi N40]
          Length = 182

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 90/182 (49%), Positives = 132/182 (72%), Gaps = 4/182 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ ++K+G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MSFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K++   +    + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSNNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +EPE  V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180

Query: 187 VG 188
             
Sbjct: 181 NE 182


>gi|297584029|ref|YP_003699809.1| 20S proteasome subunit AB [Bacillus selenitireducens MLS10]
 gi|297142486|gb|ADH99243.1| 20S proteasome A and B subunits [Bacillus selenitireducens MLS10]
          Length = 181

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 91/178 (51%), Positives = 128/178 (71%), Gaps = 3/178 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++  TTI  +R +G   I GDGQV++GQ  VMK +A KVRRL +G +I GFAGS ADAF+
Sbjct: 3   EIRGTTIFAIRHNGQAAICGDGQVTVGQAVVMKQSAVKVRRLYRGRVITGFAGSVADAFS 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KLE+Y   L R++VELAK+WR D+ LR LEAM+++ DK    VI G G+V+EP
Sbjct: 63  LYEKFEGKLEEYNGHLQRAAVELAKEWRGDRVLRKLEAMLIVMDKDSLYVIAGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           ++G+ AIGSGG+YAL+A RA+       +AEEIA++++  AA +CVYTN ++  E ++
Sbjct: 123 DDGITAIGSGGNYALAAGRAMKKHAPHLTAEEIAKESLLTAASMCVYTNDHLTTEVIE 180


>gi|218961142|ref|YP_001740917.1| peptidase component of the HslUV protease [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729799|emb|CAO80711.1| peptidase component of the HslUV protease [Candidatus Cloacamonas
           acidaminovorans]
          Length = 176

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 82/176 (46%), Positives = 126/176 (71%), Gaps = 1/176 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + MH TTI+ + ++G   I GDGQV++G  ++K  A+K+R++  G +I GFAG++ADAF+
Sbjct: 1   MIMHGTTIIGIHRNGKTAICGDGQVTMGDAIVKGKAQKIRKIYDGKVIVGFAGATADAFS 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLER E+KL+     L +++++LAKDWR D+ LR LEAM++  DK   L+I G GDVLEP
Sbjct: 61  LLERFEEKLKTNKGNLKKAAIDLAKDWRQDRILRRLEAMLIAGDKDSILLINGAGDVLEP 120

Query: 131 ENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+Y   +A      T+  A EIA +A++IA+ IC+YTN+N ++E +
Sbjct: 121 DDNIIAIGSGGNYALAAARALAHKTKLGASEIAVEALNIASGICIYTNNNYIVEEI 176


>gi|71274747|ref|ZP_00651035.1| 20S proteasome, A and B subunits [Xylella fastidiosa Dixon]
 gi|71901197|ref|ZP_00683300.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
 gi|170730011|ref|YP_001775444.1| ATP-dependent protease peptidase subunit [Xylella fastidiosa M12]
 gi|71164479|gb|EAO14193.1| 20S proteasome, A and B subunits [Xylella fastidiosa Dixon]
 gi|71729041|gb|EAO31169.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
 gi|167964804|gb|ACA11814.1| heat shock protein [Xylella fastidiosa M12]
          Length = 183

 Score =  158 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 108/184 (58%), Positives = 140/184 (76%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M     +   HATTI+ VR+   V IAGDGQV+LG TVMK+NARKVRRLG  G ++AGFA
Sbjct: 1   MEPSQMSNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KLE++  QL R++VELAKDWR ++ L  LEA++++ DK  +LVI+
Sbjct: 61  GAAADAFTLFELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVVDKETSLVIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSYALSAARALM  T   A  IA +A+ IA +IC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNGNVV 179

Query: 182 LETL 185
           ++ L
Sbjct: 180 VDEL 183


>gi|21232923|ref|NP_638840.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66767004|ref|YP_241766.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|24211774|sp|Q8P551|HSLV_XANCP RecName: Full=ATP-dependent protease subunit HslV
 gi|81307010|sp|Q4UYX7|HSLV_XANC8 RecName: Full=ATP-dependent protease subunit HslV
 gi|21114759|gb|AAM42764.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66572336|gb|AAY47746.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
           campestris pv. campestris str. 8004]
          Length = 183

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 102/184 (55%), Positives = 138/184 (75%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG  G ++AGFA
Sbjct: 1   MDPSQNPNVVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGRDGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 61  GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSY   +A   L  T+  A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|119357348|ref|YP_911992.1| ATP-dependent protease peptidase subunit [Chlorobium
           phaeobacteroides DSM 266]
 gi|119354697|gb|ABL65568.1| 20S proteasome, A and B subunits [Chlorobium phaeobacteroides DSM
           266]
          Length = 183

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 93/182 (51%), Positives = 126/182 (69%), Gaps = 1/182 (0%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M      + + +TT+L V +DG   +  DGQ++LG TV+K + RK RRL  G IIAGFAG
Sbjct: 1   MMKHDEQLLIRSTTVLGVIRDGKAALGSDGQMTLGNTVLKHSTRKTRRLYHGQIIAGFAG 60

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADA TLL+R E+KLE +  +L R++VELA+DWR DKYLR LEAM+ I      L+I+G
Sbjct: 61  ATADAVTLLDRFEEKLEAFSGRLERAAVELARDWRTDKYLRRLEAMLAIVTAEKALIISG 120

Query: 124 MGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+EPE+G++AIGSG  Y   +A   L  T  SA EI  +++ IAADIC+YTN +IV+
Sbjct: 121 TGDVIEPEDGIVAIGSGSMYALAAARSLLAHTTLSAREIVHESLKIAADICIYTNDHIVI 180

Query: 183 ET 184
           E 
Sbjct: 181 EE 182


>gi|302812404|ref|XP_002987889.1| hypothetical protein SELMODRAFT_127041 [Selaginella moellendorffii]
 gi|300144278|gb|EFJ10963.1| hypothetical protein SELMODRAFT_127041 [Selaginella moellendorffii]
          Length = 201

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 105/174 (60%), Positives = 134/174 (77%), Gaps = 1/174 (0%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+L +RK+  VVI GDGQV++G  ++K N RKVRR+G+  I    AG++ADAFTL ER
Sbjct: 3   GTTVLCIRKNDSVVIIGDGQVTMGAEILKPNVRKVRRIGENVIGGFAAGATADAFTLFER 62

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE++P  L R++VELAK WR DK+LR L+A++++AD  I+L ITG GDVLEP +G+
Sbjct: 63  LETKLEEHPGLLTRAAVELAKAWRTDKFLRRLDALMVVADAEISLTITGTGDVLEPYDGI 122

Query: 135 MAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           + IGSGGSYA +AARALM      AE+IARKAM IAAD C+YTNHN  LET+KV
Sbjct: 123 VGIGSGGSYASAAARALMDLPDMDAEKIARKAMKIAADCCIYTNHNFTLETIKV 176


>gi|111115121|ref|YP_709739.1| ATP-dependent protease peptidase subunit [Borrelia afzelii PKo]
 gi|122956394|sp|Q0SNL5|HSLV_BORAP RecName: Full=ATP-dependent protease subunit HslV
 gi|110890395|gb|ABH01563.1| heat shock protein [Borrelia afzelii PKo]
          Length = 182

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 90/182 (49%), Positives = 132/182 (72%), Gaps = 4/182 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ ++K+G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MGFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K++   +    + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKIKAKGDGLVDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +EPE  V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVVSIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180

Query: 187 VG 188
             
Sbjct: 181 NE 182


>gi|216264062|ref|ZP_03436056.1| ATP-dependent protease HslV [Borrelia afzelii ACA-1]
 gi|215980106|gb|EEC20928.1| ATP-dependent protease HslV [Borrelia afzelii ACA-1]
          Length = 182

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 90/182 (49%), Positives = 132/182 (72%), Gaps = 4/182 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ ++K+G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MGFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K++   +    + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKIKAKGDGLVDIKRAAVDLAKDWRSDKVLHKLEAMMLVADSKNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +EPE  V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVVSIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180

Query: 187 VG 188
             
Sbjct: 181 NE 182


>gi|94676999|ref|YP_588628.1| ATP-dependent protease peptidase subunit [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
 gi|166221625|sp|Q1LTT6|HSLV_BAUCH RecName: Full=ATP-dependent protease subunit HslV
 gi|94220149|gb|ABF14308.1| ATP-dependent protease HslV [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 180

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 98/177 (55%), Positives = 130/177 (73%), Gaps = 2/177 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRR-LGKGNIIAGFAGSSADAFTLLER 74
           TTI++VR++G VVI GDGQ ++G T+MK N RKVRR      +IAGFAG +ADAFTL E 
Sbjct: 2   TTIISVRRNGHVVIGGDGQATIGNTIMKGNVRKVRRLYYNDKVIAGFAGGTADAFTLFEL 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            E+KLE Y   L++++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PE  +
Sbjct: 62  FERKLESYQGHLVKAAVELAKDWRTDRRLRRLEALLAVADENASLIITGNGDVIQPEKDL 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           +AIGSGG YA SAARAL+ +T  SA EI +K++ IA DIC+YTN    +E L    E
Sbjct: 122 IAIGSGGPYAQSAARALLENTNFSAREIVKKSLVIAGDICIYTNQFHTIEELTSTAE 178


>gi|189028458|sp|A1BGP1|HSLV_CHLPD RecName: Full=ATP-dependent protease subunit HslV
          Length = 182

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 92/173 (53%), Positives = 124/173 (71%), Gaps = 1/173 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           + +TT+L V +DG   +  DGQ++LG TV+K + RK RRL  G IIAGFAG++ADA TLL
Sbjct: 9   IRSTTVLGVIRDGKAALGSDGQMTLGNTVLKHSTRKTRRLYHGQIIAGFAGATADAVTLL 68

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +R E+KLE +  +L R++VELA+DWR DKYLR LEAM+ I      L+I+G GDV+EPE+
Sbjct: 69  DRFEEKLEAFSGRLERAAVELARDWRTDKYLRRLEAMLAIVTAEKALIISGTGDVIEPED 128

Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           G++AIGSG  Y   +A   L  T  SA EI  +++ IAADIC+YTN +IV+E 
Sbjct: 129 GIVAIGSGSMYALAAARSLLAHTTLSAREIVHESLKIAADICIYTNDHIVIEE 181


>gi|77747549|ref|NP_298773.2| ATP-dependent protease peptidase subunit [Xylella fastidiosa 9a5c]
          Length = 183

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 109/184 (59%), Positives = 141/184 (76%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M     +   HATTI+ VR+   V IAGDGQV+LG TVMK+NARKVRRLG  G ++AGFA
Sbjct: 1   MEPSQMSNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KLE++  QL R++VELAKDWR ++ L  LEA++++ADK  +LVI+
Sbjct: 61  GAAADAFTLFELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSYALSAARALM  T   A  IA +A+ IA +IC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVV 179

Query: 182 LETL 185
           ++ L
Sbjct: 180 VDEL 183


>gi|224534196|ref|ZP_03674774.1| ATP-dependent protease HslV [Borrelia spielmanii A14S]
 gi|224514298|gb|EEF84614.1| ATP-dependent protease HslV [Borrelia spielmanii A14S]
          Length = 182

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 90/182 (49%), Positives = 132/182 (72%), Gaps = 4/182 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ ++K+G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MGFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K++   +    + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKIKAKGDGLVDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +EPE  V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180

Query: 187 VG 188
             
Sbjct: 181 NE 182


>gi|262195486|ref|YP_003266695.1| 20S proteasome A and subunit betas [Haliangium ochraceum DSM 14365]
 gi|262078833|gb|ACY14802.1| 20S proteasome A and B subunits [Haliangium ochraceum DSM 14365]
          Length = 175

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 130/175 (74%), Gaps = 1/175 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M ATTIL+VR+   VVIAGDGQVSLGQT+MKA+ARKVRR+ +G  +AGFAGS+AD   L 
Sbjct: 1   MRATTILSVRRGNHVVIAGDGQVSLGQTIMKASARKVRRMNEGAAVAGFAGSAADGIALF 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERL+ KL  +   L R+ VE+AKDWR D+ LR LEAM++IAD+  T +++G GDV+EP++
Sbjct: 61  ERLDGKLRGHGGNLRRAVVEMAKDWRTDRVLRRLEAMLIIADREQTYLVSGTGDVIEPDD 120

Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           GV++IGSGG Y   +A   +  T+    +IA  AM IAADICVYTNH +V+E L 
Sbjct: 121 GVVSIGSGGPYALAAARALIAKTELGVRDIAETAMGIAADICVYTNHKLVIEELT 175


>gi|85705742|ref|ZP_01036839.1| ATP-dependent protease peptidase subunit [Roseovarius sp. 217]
 gi|85669732|gb|EAQ24596.1| ATP-dependent protease peptidase subunit [Roseovarius sp. 217]
          Length = 184

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 115/176 (65%), Positives = 138/176 (78%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFT 70
            H TTI+ VR+ G VV+AGDGQVSLGQTV+K  ARKVRRL  G   ++AGFAGS+ADAFT
Sbjct: 7   WHGTTIIGVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHPVVAGFAGSTADAFT 66

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLERLE KLE  P QL R+ VELAKDWR DKYL+ LEAM+++ D     VITG GDVLEP
Sbjct: 67  LLERLETKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGDQLYVITGAGDVLEP 126

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E+ V AIGSGG++AL+AAR L  +   +AEEIAR+AM+IAADICVYTN N+ +E +
Sbjct: 127 EHDVAAIGSGGNFALAAARGLAENPSLTAEEIARRAMAIAADICVYTNGNLTVERI 182


>gi|193213900|ref|YP_001995099.1| ATP-dependent protease peptidase subunit [Chloroherpeton thalassium
           ATCC 35110]
 gi|193087377|gb|ACF12652.1| 20S proteasome A and B subunits [Chloroherpeton thalassium ATCC
           35110]
          Length = 175

 Score =  158 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 89/174 (51%), Positives = 129/174 (74%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M ATT++ V ++G   +  DGQ++ G T++K +  K+R++  G II GFAG++ADA TLL
Sbjct: 1   MRATTVIGVLRNGKAALGSDGQMTYGNTILKHSTTKIRKMHDGKIIVGFAGATADALTLL 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E+KL+ Y  +L RS+VELAK+WRMDKYLR LEAM+ +  +   L+I+G GDV+EPE+
Sbjct: 61  ERFEEKLQAYGGRLDRSAVELAKEWRMDKYLRRLEAMLAVVSREKALIISGTGDVIEPED 120

Query: 133 GVMAIGSGGSYALSAARALMSTQN-SAEEIARKAMSIAADICVYTNHNIVLETL 185
           G++AIGSG  YALSAARAL+   N  A+ I  ++++IA +IC+YTN NI ++ +
Sbjct: 121 GIVAIGSGSMYALSAARALLKHTNCDAKTIVEESLNIAGEICIYTNTNIQIQEI 174


>gi|219684503|ref|ZP_03539446.1| ATP-dependent protease HslV [Borrelia garinii PBr]
 gi|219685618|ref|ZP_03540433.1| ATP-dependent protease HslV [Borrelia garinii Far04]
 gi|219671865|gb|EED28919.1| ATP-dependent protease HslV [Borrelia garinii PBr]
 gi|219672806|gb|EED29830.1| ATP-dependent protease HslV [Borrelia garinii Far04]
          Length = 182

 Score =  158 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 90/182 (49%), Positives = 132/182 (72%), Gaps = 4/182 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ ++K+G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MGFKGTTVIAIKKNGKTVVAADGQVTFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K++   +    + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +EPE  V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180

Query: 187 VG 188
             
Sbjct: 181 NE 182


>gi|154174723|ref|YP_001408328.1| ATP-dependent protease peptidase subunit [Campylobacter curvus
           525.92]
 gi|166221632|sp|A7GYN6|HSLV_CAMC5 RecName: Full=ATP-dependent protease subunit HslV
 gi|112803190|gb|EAU00534.1| ATP-dependent protease HslV [Campylobacter curvus 525.92]
          Length = 180

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 84/178 (47%), Positives = 121/178 (67%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R++  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKIKDGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E+ LE     LL++ +E +K WR DKYLR LEAM+L+ ++    +++G GDV+EPE+
Sbjct: 62  DMFEENLEHAKGDLLKAVIEFSKAWRKDKYLRKLEAMMLVLNREKIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + AIGSGG++ALSAARAL        E++ +++++IA +IC+YTN NI    ++  
Sbjct: 122 GKIAAIGSGGNFALSAARALDKFADIDEEKLVKESLTIAGEICIYTNTNIKTYVIEDE 179


>gi|90961924|ref|YP_535840.1| ATP-dependent protease peptidase subunit [Lactobacillus salivarius
           UCC118]
 gi|122448947|sp|Q1WTI9|HSLV_LACS1 RecName: Full=ATP-dependent protease subunit HslV
 gi|90821118|gb|ABD99757.1| ATP-dependent protease hslV [Lactobacillus salivarius UCC118]
          Length = 175

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 90/173 (52%), Positives = 125/173 (72%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  V+ +G   IAGDGQV+LG+  +MK +ARKVRR+    +  GFAG  ADA  L E+
Sbjct: 2   TTICAVKHNGKTAIAGDGQVTLGEKVIMKGSARKVRRIYNDKVAVGFAGGVADAINLEEK 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            E KL +Y   L R++VELA++WR D+ L+ LEAM+++ DK   L+++G G+V+ P+NGV
Sbjct: 62  FENKLNEYSGNLERAAVELAQEWRGDRTLQKLEAMLIVIDKDNLLIVSGSGEVIVPDNGV 121

Query: 135 MAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YA +AA AL   S   SA EIA+ A++IAADI ++TNHNI++E L
Sbjct: 122 LAIGSGGNYAQAAAVALSEYSKDMSAGEIAKAALNIAADIDIFTNHNIIVEEL 174


>gi|78046248|ref|YP_362423.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
 gi|289664008|ref|ZP_06485589.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
           pv. vasculorum NCPPB702]
 gi|325918372|ref|ZP_08180503.1| HslV component of HslUV peptidase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325925417|ref|ZP_08186816.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
 gi|325928768|ref|ZP_08189937.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
 gi|123585935|sp|Q3BXU0|HSLV_XANC5 RecName: Full=ATP-dependent protease subunit HslV
 gi|78034678|emb|CAJ22323.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|325535395|gb|EGD07260.1| HslV component of HslUV peptidase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325540849|gb|EGD12422.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
 gi|325544177|gb|EGD15561.1| HslV component of HslUV peptidase [Xanthomonas perforans 91-118]
          Length = 183

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 102/184 (55%), Positives = 139/184 (75%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1   MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 61  GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSY   +A   L  T+  A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|302035681|ref|YP_003796003.1| heat shock protein hslUV, peptidase component [Candidatus
           Nitrospira defluvii]
 gi|300603745|emb|CBK40077.1| Heat shock protein HslUV, peptidase component [Candidatus
           Nitrospira defluvii]
          Length = 178

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 91/178 (51%), Positives = 132/178 (74%), Gaps = 1/178 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + + +TT+L VR+   V +  DGQV++G TVMK NARK+RR+    ++AGFAG++ADAFT
Sbjct: 1   MTIRSTTVLCVRRGSQVTMGCDGQVTVGTTVMKHNARKMRRMHGDTVLAGFAGATADAFT 60

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELAKDWR D+ LR LEA++ +AD   + +I+G GDV+EP
Sbjct: 61  LFEKFEAKLAEYRGNLTRAAVELAKDWRTDRVLRRLEALLAVADLDHSFIISGTGDVVEP 120

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           E+G++AIGSGG YAL+AARAL+  ++  AE++ R+++ IA  I +YTN  IV+E+L  
Sbjct: 121 EDGILAIGSGGPYALAAARALLGHSELVAEQVVRESLMIAGGIDIYTNQQIVIESLSR 178


>gi|78357167|ref|YP_388616.1| ATP-dependent protease peptidase subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|123552215|sp|Q30ZH5|HSLV_DESDG RecName: Full=ATP-dependent protease subunit HslV
 gi|78219572|gb|ABB38921.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 180

 Score =  157 bits (397), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 130/175 (74%), Gaps = 2/175 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           + +  TTIL V+ D  V +AGDGQV+LGQ  VMK  ARKVRR+ K  IIAGFAGS+ADAF
Sbjct: 1   MDLKGTTILAVKDDEGVSMAGDGQVTLGQAIVMKHGARKVRRIYKDRIIAGFAGSTADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL ER E KLE++   LLR+SVE+AKDWR DK+LR LEAM+L++D T  L+++G GDV+E
Sbjct: 61  TLFERFEAKLEEFGGNLLRASVEMAKDWRKDKFLRRLEAMLLVSDGTTLLMLSGTGDVIE 120

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           P++GV AIGSGG Y   +A      T  SA+EI  KAM+IA ++CV+TN ++ +E
Sbjct: 121 PDDGVAAIGSGGPYALAAARALQRHTALSAQEIVTKAMAIAGELCVFTNDHLTVE 175


>gi|312130064|ref|YP_003997404.1| ATP dependent peptidase codwx, codw component [Leadbetterella
           byssophila DSM 17132]
 gi|311906610|gb|ADQ17051.1| ATP dependent peptidase CodWX, CodW component [Leadbetterella
           byssophila DSM 17132]
          Length = 180

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 86/173 (49%), Positives = 124/173 (71%), Gaps = 2/173 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+ +TT+L V  +G + +  DGQ ++G TV K+N +K+R L  G ++AGFAGS+ADAFTL
Sbjct: 3   KIKSTTVLGVFHNGKLALGADGQATMGNTVAKSNVKKIRTLAGGKVVAGFAGSTADAFTL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +E+ E+KL  Y   L R+++EL K+WR D+YL  LEAM+++A+K   LVI+G GDVLEP+
Sbjct: 63  IEKFEEKLNTYNGNLRRAAIELVKEWRTDRYLSKLEAMMIVANKEEMLVISGSGDVLEPD 122

Query: 132 NGVMAIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
           + V AIGSG  Y  A + A    +   SAEE+ R+ ++IAADIC+YTNHN ++
Sbjct: 123 SQVAAIGSGSMYAQAAALALKKHAPHLSAEEMVREGLTIAADICIYTNHNFII 175


>gi|227890940|ref|ZP_04008745.1| ATP-dependent protease peptidase subunit [Lactobacillus salivarius
           ATCC 11741]
 gi|301299311|ref|ZP_07205596.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|227867349|gb|EEJ74770.1| ATP-dependent protease peptidase subunit [Lactobacillus salivarius
           ATCC 11741]
 gi|300214645|gb|ADJ79061.1| ATP-dependent protease hslV [Lactobacillus salivarius CECT 5713]
 gi|300853051|gb|EFK80650.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 175

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 90/173 (52%), Positives = 125/173 (72%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  V+ +G   IAGDGQV+LG+  +MK +ARKVRR+    +  GFAG  ADA  L E+
Sbjct: 2   TTICAVKHNGKTAIAGDGQVTLGEKVIMKGSARKVRRIYNDKVAVGFAGGVADAINLEEK 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            E KL +Y   L R++VELA++WR D+ L+ LEAM+++ DK   L+++G G+V+ P+NGV
Sbjct: 62  FENKLNEYSGNLERAAVELAQEWRGDRTLQKLEAMLIVIDKDNLLIVSGSGEVIAPDNGV 121

Query: 135 MAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YA +AA AL   S   SA EIA+ A++IAADI ++TNHNI++E L
Sbjct: 122 LAIGSGGNYAQAAAVALSEYSKDMSAGEIAKAALNIAADIDIFTNHNIIVEEL 174


>gi|73662824|ref|YP_301605.1| ATP-dependent protease peptidase subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|123642437|sp|Q49X38|HSLV_STAS1 RecName: Full=ATP-dependent protease subunit HslV
 gi|72495339|dbj|BAE18660.1| proteasome protease subunit [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 180

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 95/177 (53%), Positives = 132/177 (74%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            +HATTI  V+ +G   +AGDGQV+LG Q +MK  ARKVRRL    ++AGFAGS ADAFT
Sbjct: 4   SIHATTIFAVQHNGHAAMAGDGQVTLGEQVIMKQTARKVRRLYNDKVLAGFAGSVADAFT 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL+Q+   L R++VELA++WR DK LR LEAM+++ D+T  LV++G G+V+ P
Sbjct: 64  LFEKFETKLQQFSGNLERAAVELAQEWRGDKQLRQLEAMLIVMDETSILVVSGTGEVIVP 123

Query: 131 ENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ ++AIGSGG+YALSA RAL    T  SA E+A +++ +A+DICV+TN  I++E L
Sbjct: 124 DDNLIAIGSGGNYALSAGRALKRNATHLSASEMAYESLKVASDICVFTNDRIIVENL 180


>gi|304560537|gb|ADM43201.1| ATP-dependent protease HslV [Edwardsiella tarda FL6-60]
          Length = 163

 Score =  157 bits (397), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 90/162 (55%), Positives = 119/162 (73%), Gaps = 1/162 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           +I GDGQ +LG TVMK N RKVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 1   MIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELFERKLELHQGHLV 60

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 61  KAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAA 120

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           ARAL+ +T+  A +I  KA+ IA DIC+YTN    +E L   
Sbjct: 121 ARALLENTELGARDIVEKALGIAGDICIYTNQFHTIEELDSK 162


>gi|294666816|ref|ZP_06732049.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292603400|gb|EFF46818.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 183

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 103/184 (55%), Positives = 139/184 (75%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1   MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 61  GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSY   +A   L  TQ  A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTQLDAKTIAAEAINIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|149173421|ref|ZP_01852051.1| ATP-dependent protease peptidase subunit [Planctomyces maris DSM
           8797]
 gi|148847603|gb|EDL61936.1| ATP-dependent protease peptidase subunit [Planctomyces maris DSM
           8797]
          Length = 186

 Score =  157 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 96/186 (51%), Positives = 136/186 (73%), Gaps = 2/186 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           MG K    K  +TTILTVR +G V I GDGQV+ G TVMK++ RK+R++  G ++ GFAG
Sbjct: 1   MGSKDNK-KWRSTTILTVRHNGQVAIGGDGQVTHGDTVMKSDTRKIRKILDGQVVCGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           S+ADAF+LLER E K   YP  + R++ ELA+DWR D+ LR LEA+I++ +   +L+ITG
Sbjct: 60  STADAFSLLERFEVKARDYPGNMPRAATELARDWRTDRVLRKLEALIIVVNDEHSLLITG 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVL 182
            GDV+ P +G++ IGSGG+YA +AARAL+  +Q SA EI + ++ IA+DI +YTN+NI++
Sbjct: 120 QGDVVVPSDGIIGIGSGGNYATAAARALVGHSQLSAAEIVKTSLGIASDIDIYTNNNIIV 179

Query: 183 ETLKVG 188
           E L+  
Sbjct: 180 EELQCK 185


>gi|325922227|ref|ZP_08184013.1| HslV component of HslUV peptidase [Xanthomonas gardneri ATCC 19865]
 gi|325547297|gb|EGD18365.1| HslV component of HslUV peptidase [Xanthomonas gardneri ATCC 19865]
          Length = 183

 Score =  157 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 102/184 (55%), Positives = 138/184 (75%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1   MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 61  GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSY   +A   L  T+  A+ IA +A+ IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDAKTIATEAIHIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|146337378|ref|YP_001202426.1| ATP-dependent protease peptidase subunit [Bradyrhizobium sp.
           ORS278]
 gi|166221627|sp|A4YJV0|HSLV_BRASO RecName: Full=ATP-dependent protease subunit HslV
 gi|146190184|emb|CAL74176.1| ATP-dependent protease hslV (protease subunit of a proteasome-like
           degradation complex) [Bradyrhizobium sp. ORS278]
          Length = 186

 Score =  157 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 124/186 (66%), Positives = 149/186 (80%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +          H TTILTVRK G VV+ GDGQVS+GQTV+K+NARKVR+LGKG++I GFA
Sbjct: 1   MHALSQEPTVWHGTTILTVRKGGRVVVGGDGQVSIGQTVIKSNARKVRKLGKGDVIGGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL ERLE KLEQYP QL R++VELAKDWR D+YLR LEAM+++ADK ++LV+T
Sbjct: 61  GATADAFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKEVSLVLT 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
           G GDVLEPE GVMAIGSGG+YAL+AARAL+ T   AE I RK++ IAADICVYTN NI +
Sbjct: 121 GTGDVLEPEAGVMAIGSGGNYALAAARALIDTDKDAESIVRKSLDIAADICVYTNRNITI 180

Query: 183 ETLKVG 188
           E L   
Sbjct: 181 EALSAE 186


>gi|331701474|ref|YP_004398433.1| ATP-dependent protease hslV [Lactobacillus buchneri NRRL B-30929]
 gi|329128817|gb|AEB73370.1| ATP-dependent protease hslV [Lactobacillus buchneri NRRL B-30929]
          Length = 180

 Score =  157 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 83/179 (46%), Positives = 125/179 (69%), Gaps = 3/179 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADA 68
            +K  ATTI+ VR +G + +AGDGQV++G+  +MK  A KVR +    ++ GFAGS ADA
Sbjct: 2   PIKFEATTIVAVRHNGHLAMAGDGQVTMGEKVIMKGTAHKVRLIYDNQVVVGFAGSVADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F L ER EKKL Q+   L RS+VELA++WR D+ L+ LEA++++ +    L+++G G+V+
Sbjct: 62  FNLEERFEKKLNQFDGDLKRSAVELAQEWRGDQQLQKLEALLIVMNDKDLLLVSGQGEVI 121

Query: 129 EPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EP++ ++AIGSGG++AL+AA A+       SA EIA  A+ IA +I ++TN N++ E L
Sbjct: 122 EPDDDILAIGSGGNFALAAATAMKHHAQDMSAREIAEAAIHIAGNIDIFTNQNVISEEL 180


>gi|223040633|ref|ZP_03610903.1| ATP-dependent protease HslV [Campylobacter rectus RM3267]
 gi|222878091|gb|EEF13202.1| ATP-dependent protease HslV [Campylobacter rectus RM3267]
          Length = 177

 Score =  157 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 87/176 (49%), Positives = 120/176 (68%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  +     VI GDGQVS G TV+K NA K+R++  G ++AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGKNKSVIGGDGQVSFGNTVLKGNAVKIRKIHGGKVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L+     LL++ +E +K+WR DKYLR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFENNLDHAKGDLLKAVIEFSKEWRKDKYLRKLEAMMLVLDREKIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             + AIGSGG+YALSAARAL        EE+ ++++ IA +IC+YTN NI    L+
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFARIDEEELVKESLKIAGEICIYTNTNIKTYVLE 177


>gi|167630282|ref|YP_001680781.1| ATP-dependent protease hslv [Heliobacterium modesticaldum Ice1]
 gi|167593022|gb|ABZ84770.1| ATP-dependent protease hslv [Heliobacterium modesticaldum Ice1]
          Length = 186

 Score =  157 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 92/182 (50%), Positives = 132/182 (72%), Gaps = 2/182 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +KM  TTI+ V++   V +AGDGQ++ G  T+MKA A+KVRRL +G +IAG AGS ADA 
Sbjct: 4   MKMMGTTIVAVKRGTQVAVAGDGQITFGDRTIMKATAKKVRRLYQGKVIAGIAGSVADAL 63

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TLL++LE K++++   LLR+SV+LAK+WR D++LR LEAMI+ AD    LVI+G G+V+E
Sbjct: 64  TLLDKLENKIQEFRGNLLRASVDLAKEWRTDRFLRRLEAMIIAADADHLLVISGNGEVIE 123

Query: 130 PENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           P++GV+AIGSGG Y   +A      +  +  EIAR+A+ +A++ICV+TN  I LE ++  
Sbjct: 124 PDDGVVAIGSGGPYALAAARALARHSDLAPGEIARQALVVASEICVFTNDRITLEEIEGT 183

Query: 189 DE 190
            E
Sbjct: 184 GE 185


>gi|77747654|ref|NP_778923.2| ATP-dependent protease peptidase subunit [Xylella fastidiosa
           Temecula1]
 gi|182681292|ref|YP_001829452.1| ATP-dependent protease peptidase subunit [Xylella fastidiosa M23]
 gi|226704550|sp|B2IA19|HSLV_XYLF2 RecName: Full=ATP-dependent protease subunit HslV
 gi|182631402|gb|ACB92178.1| 20S proteasome A and B subunits [Xylella fastidiosa M23]
          Length = 183

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 109/184 (59%), Positives = 141/184 (76%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M     +   HATTI+ VR+   V IAGDGQV+LG TVMK+NARKVRRLG  G ++AGFA
Sbjct: 1   MESSQMSNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KLE++  QL R++VELAKDWR ++ L  LEA++++ADK  +LVI+
Sbjct: 61  GAAADAFTLFELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSYALSAARALM  T   A  IA +A+ IA +IC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVV 179

Query: 182 LETL 185
           ++ L
Sbjct: 180 VDEL 183


>gi|21241408|ref|NP_640990.1| ATP-dependent protease peptidase subunit [Xanthomonas axonopodis
           pv. citri str. 306]
 gi|24211779|sp|Q8PPP8|HSLV_XANAC RecName: Full=ATP-dependent protease subunit HslV
 gi|21106743|gb|AAM35526.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 183

 Score =  157 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 103/184 (55%), Positives = 139/184 (75%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1   MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 61  GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSY   +A   L  TQ  A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVVEPEDGIIAIGSGGSYALSAARALLAHTQLDAKTIAAEAINIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|258597527|ref|XP_001350699.2| Heat shock protein hslv [Plasmodium falciparum 3D7]
 gi|254945393|gb|AAN36379.2| Heat shock protein hslv [Plasmodium falciparum 3D7]
          Length = 207

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 100/182 (54%), Positives = 133/182 (73%), Gaps = 2/182 (1%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    +  H TTIL VRK+  V + GDG VS G  ++K NA+K+RRL    I+ GFAG+
Sbjct: 27  DNSKLIIPRHGTTILCVRKNNEVCLIGDGMVSQGTMIVKGNAKKIRRLKDN-ILMGFAGA 85

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +AD FTLL++ E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK I L +TG 
Sbjct: 86  TADCFTLLDKFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDILLEVTGN 145

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           GDVLEP   V+  GSGG YA++AARAL      SA++IA KAM+IAAD+C +TN+N + E
Sbjct: 146 GDVLEPSGNVLGTGSGGPYAMAAARALYDVENLSAKDIAYKAMNIAADMCCHTNNNFICE 205

Query: 184 TL 185
           TL
Sbjct: 206 TL 207


>gi|149201421|ref|ZP_01878396.1| ATP-dependent protease peptidase subunit [Roseovarius sp. TM1035]
 gi|149145754|gb|EDM33780.1| ATP-dependent protease peptidase subunit [Roseovarius sp. TM1035]
          Length = 184

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 114/176 (64%), Positives = 137/176 (77%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFT 70
            H TTI+ VR+ G VV+AGDGQVSLGQTV+K  ARKVRRL  G   ++AGFAGS+ADAFT
Sbjct: 7   WHGTTIIGVRRGGEVVVAGDGQVSLGQTVIKGTARKVRRLSPGGHPVVAGFAGSTADAFT 66

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLERLE KLE  P QL R+ VELAKDWR DKYL+ LEAM+++ D     VITG GDVLEP
Sbjct: 67  LLERLETKLEATPGQLQRACVELAKDWRTDKYLQKLEAMLIVTDGDQLYVITGAGDVLEP 126

Query: 131 ENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E+ V AIGSGG++AL+AAR L  +   SAE+IAR+AM+IAADICVYTN  + +E +
Sbjct: 127 EHDVAAIGSGGNFALAAARGLAENPDLSAEDIARRAMAIAADICVYTNGKLTVERI 182


>gi|70733941|ref|YP_257581.1| ATP-dependent protease peptidase subunit [Pseudomonas fluorescens
           Pf-5]
 gi|123658507|sp|Q4KJK2|HSLV_PSEF5 RecName: Full=ATP-dependent protease subunit HslV
 gi|68348240|gb|AAY95846.1| heat shock protein HslV [Pseudomonas fluorescens Pf-5]
          Length = 176

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG+YA +AA AL+  T  SA EI   A+ IA DICV+TNH   +E   + +
Sbjct: 122 AMGSGGAYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHTQTIEEQDLAE 176


>gi|197123190|ref|YP_002135141.1| ATP-dependent protease peptidase subunit [Anaeromyxobacter sp. K]
 gi|220917979|ref|YP_002493283.1| 20S proteasome A and B subunits [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|238065807|sp|B4UIH9|HSLV_ANASK RecName: Full=ATP-dependent protease subunit HslV
 gi|254802326|sp|B8JES1|HSLV_ANAD2 RecName: Full=ATP-dependent protease subunit HslV
 gi|196173039|gb|ACG74012.1| 20S proteasome A and B subunits [Anaeromyxobacter sp. K]
 gi|219955833|gb|ACL66217.1| 20S proteasome A and B subunits [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 181

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 88/178 (49%), Positives = 122/178 (68%), Gaps = 5/178 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MH TT+L VR++G VVIAGDGQV+L +TVMKA ARKVRRLG+G ++AGFAG++ADAF L 
Sbjct: 4   MHGTTVLCVRREGRVVIAGDGQVTLDKTVMKATARKVRRLGEGQVVAGFAGATADAFQLF 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E  EKKL+++   L R++VELAK WR D+ LR LEA++L+AD+   LV++G GDV+EP+ 
Sbjct: 64  ELFEKKLKEHARSLPRAAVELAKQWRTDRMLRRLEALLLVADREHLLVLSGAGDVIEPDP 123

Query: 133 GVMAIGSGGSYALSA-----ARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
                 +                L  +   A ++A +AM +AA+IC+YTN N+ +E L
Sbjct: 124 VANGAAAAIGSGGPYALAAARALLAHSALDARQVAEEAMKLAAEICIYTNGNLTIEEL 181


>gi|145568945|gb|ABP78051.1| heat shock protein HslV [Pseudomonas stutzeri A1501]
          Length = 172

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 90/170 (52%), Positives = 124/170 (72%), Gaps = 3/170 (1%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +R++G VV+ GDGQVSLG TVMK NA+KVRRL  G ++AGFAG++ADAFTL ER E +LE
Sbjct: 1   MRRNGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERFEGQLE 60

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSG 140
           ++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV++PE+ ++A+GSG
Sbjct: 61  KHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVQPEDDLIAMGSG 120

Query: 141 GSY---ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           G +   A  A         SA+EIA  A++IA  ICV+TN N+ +E L  
Sbjct: 121 GGFAQAAAKALLLKAGADMSAQEIAETALNIAGSICVFTNQNLTIEELDS 170


>gi|149194253|ref|ZP_01871350.1| ATP-dependent protease peptidase subunit [Caminibacter
           mediatlanticus TB-2]
 gi|149135428|gb|EDM23907.1| ATP-dependent protease peptidase subunit [Caminibacter
           mediatlanticus TB-2]
          Length = 182

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 86/178 (48%), Positives = 123/178 (69%), Gaps = 2/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + + ATTIL  +KDGV VI GDGQV+ G  V+K NA+KVR L  G I+AGFAGS+ADAF 
Sbjct: 3   INLEATTILGYKKDGVAVIGGDGQVTFGNAVLKGNAKKVRTLYNGKILAGFAGSTADAFI 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +  E  L+     LL++ ++ AK+WR DKYLR LEAM+++ +     +++G GDV+EP
Sbjct: 63  LFDMFENHLQNRKGDLLKAVIDFAKEWRQDKYLRRLEAMMIVLNTKHIFILSGSGDVVEP 122

Query: 131 EN-GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           E+  + AIGSGG++A+SAARAL        E + ++++ IA ++C+YTN NI L  L+
Sbjct: 123 EDGKLAAIGSGGNFAISAARALDRHANLDPESLVKESLQIAGELCIYTNTNITLLKLE 180


>gi|84684627|ref|ZP_01012528.1| ATP-dependent protease peptidase subunit [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667606|gb|EAQ14075.1| ATP-dependent protease peptidase subunit [Rhodobacterales bacterium
           HTCC2654]
          Length = 183

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 124/177 (70%), Positives = 140/177 (79%), Gaps = 2/177 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFT 70
            H TTI  VRK G VVIAGDGQVSLG TV+K  ARKVRRL  G  +IIAGFAGS+ADAFT
Sbjct: 7   WHGTTICGVRKGGEVVIAGDGQVSLGDTVIKGTARKVRRLSPGGYDIIAGFAGSTADAFT 66

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLERLE KLE  P QL R+ VELAKDWR DKYL+ LEAM++++D     V+TG GDVLEP
Sbjct: 67  LLERLETKLEATPGQLARACVELAKDWRTDKYLQKLEAMLIVSDGKDLFVVTGAGDVLEP 126

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           E+ V AIGSGG+YAL+A RA+M T  SAEEIAR AM+IAADICVYTN N+ LETLK 
Sbjct: 127 EHDVAAIGSGGNYALAAGRAMMDTDKSAEEIARAAMAIAADICVYTNGNLTLETLKT 183


>gi|294625643|ref|ZP_06704266.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|292600066|gb|EFF44180.1| ATP-dependent protease peptidase subunit [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
          Length = 183

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 102/184 (55%), Positives = 138/184 (75%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1   MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++   L R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 61  GAAADAFTLFELFEAKLDKH-GHLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSY   +A   L  TQ  A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTQLDAKTIAAEAINIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|71897646|ref|ZP_00679891.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
 gi|71732549|gb|EAO34602.1| 20S proteasome, A and B subunits [Xylella fastidiosa Ann-1]
          Length = 183

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 109/184 (59%), Positives = 141/184 (76%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M     +   HATTI+ VR+   V IAGDGQV+LG TVMK+NARKVRRLG  G ++AGFA
Sbjct: 1   MESSQMSNVFHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KLE++  QL R++VELAKDWR ++ L  LEA++++ADK  +LVI+
Sbjct: 61  GAAADAFTLFELFEGKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSYALSAARALM  T   A  IA +A+ IA +IC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVV 179

Query: 182 LETL 185
           ++ L
Sbjct: 180 VDEL 183


>gi|319957238|ref|YP_004168501.1| 20S proteasome a and b subunits [Nitratifractor salsuginis DSM
           16511]
 gi|319419642|gb|ADV46752.1| 20S proteasome A and B subunits [Nitratifractor salsuginis DSM
           16511]
          Length = 178

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 89/176 (50%), Positives = 119/176 (67%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  R +   VI GDGQV+ G TV+K NA K+R L    I+AGFAGS+ADAFTL 
Sbjct: 2   FEATTILAYRGENHAVIGGDGQVTFGNTVLKGNATKIRTLYHDKILAGFAGSTADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L +    LL+S +E +K WR DK+LR LEAM+L+ +K    +++G GDV+EPE+
Sbjct: 62  DMFEGILNEKRGDLLKSVIEFSKKWRQDKHLRQLEAMMLVLNKEHIFILSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             + AIGSGG++ALSAARAL   T   A  + R+++ IA ++C+YTN NI L  LK
Sbjct: 122 GKIAAIGSGGNFALSAARALDRQTDLDAATLVRESLQIAGELCIYTNTNIKLLELK 177


>gi|289667445|ref|ZP_06488520.1| ATP-dependent protease peptidase subunit [Xanthomonas campestris
           pv. musacearum NCPPB4381]
          Length = 183

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 101/184 (54%), Positives = 137/184 (74%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1   MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL    E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 61  GAAADAFTLFGLFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119

Query: 123 GMGDVLEPENGVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGGSY   +A   L  T+  A  IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGSYALSAARALLAHTELDARTIATEAINIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|330807098|ref|YP_004351560.1| ATP-dependent protease, peptidase subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375206|gb|AEA66556.1| ATP-dependent protease, peptidase subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 176

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 100/175 (57%), Positives = 134/175 (76%), Gaps = 1/175 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER 
Sbjct: 2   TTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E +LE++   L+R++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++
Sbjct: 62  EGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLI 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           A+GSGG+YA +AA AL+  T  SA EI   A+ IA DICV+TNH   +E   + +
Sbjct: 122 AMGSGGAYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHTQTIEEQDLAE 176


>gi|58428210|gb|AAW77247.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
           oryzae pv. oryzae KACC10331]
          Length = 190

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 100/184 (54%), Positives = 137/184 (74%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 8   MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 67

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 68  GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 126

Query: 123 GMGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGG     +A   L  T+  A+ IA +A++IA DIC+YTN N+V
Sbjct: 127 GTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 186

Query: 182 LETL 185
           +E L
Sbjct: 187 VEEL 190


>gi|84625421|ref|YP_452793.1| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|122879308|ref|YP_202632.6| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|229358032|ref|YP_001912064.2| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|123520883|sp|Q2NYV8|HSLV_XANOM RecName: Full=ATP-dependent protease subunit HslV
 gi|84369361|dbj|BAE70519.1| ATP-dependent HslUV protease peptidase subunit HslV [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
          Length = 183

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 100/184 (54%), Positives = 137/184 (74%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1   MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I+
Sbjct: 61  GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIS 119

Query: 123 GMGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGG     +A   L  T+  A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|203284217|ref|YP_002221957.1| hypothetical protein BDU_299 [Borrelia duttonii Ly]
 gi|238690558|sp|B5RLC2|HSLV_BORDL RecName: Full=ATP-dependent protease subunit HslV
 gi|201083660|gb|ACH93251.1| hslV gene product [Borrelia duttonii Ly]
          Length = 180

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 93/179 (51%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ +R+ G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MNFKGTTVIAIRRAGKTVVAADGQVTFGYTVLKSNAVKIRKLVNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K+   E     + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKVKSREDGIIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSDNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +EPE  V++IGSGG+YA SAA A M + + SA +IA KA+ IAA +C+YTN NIVLE +
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKALKIAARVCIYTNSNIVLEEI 179


>gi|188586010|ref|YP_001917555.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
           family T01B [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350697|gb|ACB84967.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
           family T01B [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 181

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 86/178 (48%), Positives = 124/178 (69%), Gaps = 2/178 (1%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTI   + D    IAGDGQ+++G  T+ K +A+K+ +L KG ++AGFAGS ADA TL E
Sbjct: 4   GTTIAACKTDKGTAIAGDGQITMGQNTIFKQSAKKIWKLYKGEVLAGFAGSVADAMTLFE 63

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R E KLEQ    L ++SVELAK+WR DK LR LEA++L+A+     +I+G G+++EP++ 
Sbjct: 64  RFEHKLEQEKGNLSKASVELAKEWRSDKVLRRLEALLLVANLDKMFIISGSGEIIEPDDN 123

Query: 134 VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           V AIGSGG+YALSA + L   +  +  E+A +A++ AA+ICVYTN +I +E L+   +
Sbjct: 124 VAAIGSGGAYALSALKMLSKHSDLAPGEMACEALNTAAEICVYTNSHISVEELRAQGD 181


>gi|78777573|ref|YP_393888.1| ATP-dependent protease peptidase subunit [Sulfurimonas
           denitrificans DSM 1251]
 gi|123550054|sp|Q30QS8|HSLV_SULDN RecName: Full=ATP-dependent protease subunit HslV
 gi|78498113|gb|ABB44653.1| 20S proteasome, A and B subunits [Sulfurimonas denitrificans DSM
           1251]
          Length = 181

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 86/180 (47%), Positives = 120/180 (66%), Gaps = 2/180 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  +     VI GDGQV+ G +V+K NA K+R L  G I+AGFAGS+ADAF L 
Sbjct: 2   FDATTILAYKGKNRAVIGGDGQVTFGNSVLKGNATKIRTLYNGKILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E+ LE     +L+S VE +K WR DK LR LEAM+++ +     ++TG GDV+EPE+
Sbjct: 62  DMFEEFLEAKKGDILKSVVEFSKAWRKDKVLRRLEAMMIVLNSEHIFILTGNGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
             + +IGSGG++A+SAARAL        E + R+++SIAAD+C+YTNHNI + +L    +
Sbjct: 122 GEIASIGSGGNFAISAARALKKHSSLDEEALVRESLSIAADLCIYTNHNIKVLSLDGEKK 181


>gi|238921644|ref|YP_002935159.1| ATP-dependent protease peptidase subunit [Edwardsiella ictaluri
           93-146]
 gi|238871213|gb|ACR70924.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 163

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 90/162 (55%), Positives = 119/162 (73%), Gaps = 1/162 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           +I GDGQ +LG TVMK N RKVRRL    +IAGFAG +ADAFTL E  E+KLE +   L+
Sbjct: 1   MIGGDGQATLGNTVMKGNVRKVRRLYNDRVIAGFAGGTADAFTLFELFERKLELHQGHLV 60

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           +++VELAKDWR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++AIGSGG YA +A
Sbjct: 61  KAAVELAKDWRTDRMLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAA 120

Query: 148 ARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           ARAL+ +T+  A +I  KA+ IA DIC+YTN    +E L   
Sbjct: 121 ARALLENTELGAHDIVEKALGIAGDICIYTNQFHTIEELDSK 162


>gi|166710519|ref|ZP_02241726.1| ATP-dependent protease peptidase subunit [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 183

 Score =  155 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 100/184 (54%), Positives = 136/184 (73%), Gaps = 3/184 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFA 62
           M        +HATTI++VR+ G V +AGDGQV+LG TVMK NARKVRRLG +G ++AGFA
Sbjct: 1   MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G++ADAFTL E  E KL+++  QL R++VELAKDWR ++ L  LEA++ +ADK  +L+I 
Sbjct: 61  GAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIIG 119

Query: 123 GMGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++AIGSGG     +A   L  T+  A+ IA +A++IA DIC+YTN N+V
Sbjct: 120 GTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVV 179

Query: 182 LETL 185
           +E L
Sbjct: 180 VEEL 183


>gi|218296679|ref|ZP_03497397.1| 20S proteasome A and B subunits [Thermus aquaticus Y51MC23]
 gi|218242992|gb|EED09525.1| 20S proteasome A and B subunits [Thermus aquaticus Y51MC23]
          Length = 194

 Score =  155 bits (391), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 92/177 (51%), Positives = 128/177 (72%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAF 69
           V++H TTIL VRK GV  +AGDGQV+LGQTV+K  A KVRRL  G  ++ GFAG  ADA 
Sbjct: 15  VEIHGTTILAVRKGGVTALAGDGQVTLGQTVLKRAAVKVRRLEVGEGVLVGFAGGVADAL 74

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            LLER E+KL++    LL+ +VE AK WR D+ LR+LEAMI+ AD+   ++++G G+V+ 
Sbjct: 75  ALLERFEEKLKEAKGNLLKGAVETAKLWRTDRVLRHLEAMIVAADRENMVLLSGSGEVIA 134

Query: 130 PENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           PE  ++A+GSGG YAL+AA+AL      SA+EIA +A+ IAA++ +YT+  + + TL
Sbjct: 135 PEEPLLAVGSGGPYALAAAKALFRHSALSAKEIAEEALKIAAEVDLYTSGQVTVLTL 191


>gi|268679659|ref|YP_003304090.1| 20S proteasome A and subunit betas [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617690|gb|ACZ12055.1| 20S proteasome A and B subunits [Sulfurospirillum deleyianum DSM
           6946]
          Length = 181

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 120/179 (67%), Gaps = 2/179 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  R D   VI GDGQV+ G TV+K NA K+R+L  G I+AGFAGS+ADAF L 
Sbjct: 2   FEATTILACRGDKKAVIGGDGQVTFGNTVLKNNATKIRKLYNGKILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  LEQ    L +S +E +K+WR DK LR LEAM+++ D     +++G GDV+EPE+
Sbjct: 62  DMFENILEQKKGDLYKSVIEFSKEWRKDKMLRRLEAMMIVLDCQHIFILSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
             + AIGSGG+YA+SAARAL        E + ++++ IA+++C+YTN++I    L+  +
Sbjct: 122 GKIAAIGSGGNYAISAARALDRHASLDEETLVKESLKIASELCIYTNNHIKTFVLESSE 180


>gi|119953095|ref|YP_945304.1| ATP-dependent protease peptidase subunit [Borrelia turicatae
           91E135]
 gi|254802400|sp|A1QZ92|HSLV_BORT9 RecName: Full=ATP-dependent protease subunit HslV
 gi|119861866|gb|AAX17634.1| ATP-dependent protease HslV [Borrelia turicatae 91E135]
          Length = 180

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 92/179 (51%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ +R+ G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MSFKGTTVIAIRRGGKTVVAADGQVTFGYTVLKSNAIKIRKLFNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K+   E     + R++VELAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKVKAREDGIIDIKRAAVELAKDWRSDKILHKLEAMMLVADSENILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +EPE  V++IGSGG+YA SAA A M + + SA +IA K++ +AA +C+YTN NIVLE +
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKSLKVAARVCIYTNSNIVLEEI 179


>gi|54037331|sp|P65800|HSLV_XYLFT RecName: Full=ATP-dependent protease subunit HslV
 gi|54041542|sp|P65799|HSLV_XYLFA RecName: Full=ATP-dependent protease subunit HslV
 gi|9106511|gb|AAF84293.1|AE003978_1 heat shock protein [Xylella fastidiosa 9a5c]
 gi|28056693|gb|AAO28572.1| heat shock protein [Xylella fastidiosa Temecula1]
 gi|307579743|gb|ADN63712.1| ATP-dependent protease peptidase subunit [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 178

 Score =  155 bits (391), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 108/175 (61%), Positives = 139/175 (79%), Gaps = 3/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTL 71
            HATTI+ VR+   V IAGDGQV+LG TVMK+NARKVRRLG  G ++AGFAG++ADAFTL
Sbjct: 5   FHATTIVCVRRGDKVAIAGDGQVTLGHTVMKSNARKVRRLGRDGQVLAGFAGAAADAFTL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E  E KLE++  QL R++VELAKDWR ++ L  LEA++++ADK  +LVI+G GDV+EPE
Sbjct: 65  FELFEAKLEKH-GQLSRAAVELAKDWRTERRLGKLEALLVVADKETSLVISGTGDVIEPE 123

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +G++AIGSGGSYALSAARALM  T   A  IA +A+ IA +IC+YTN N+V++ L
Sbjct: 124 DGIVAIGSGGSYALSAARALMAHTALDARTIATEAIGIAGNICIYTNRNVVVDEL 178


>gi|203287756|ref|YP_002222771.1| heat shock protein [Borrelia recurrentis A1]
 gi|238690589|sp|B5RRB6|HSLV_BORRA RecName: Full=ATP-dependent protease subunit HslV
 gi|201084976|gb|ACH94550.1| heat shock protein [Borrelia recurrentis A1]
          Length = 180

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 93/179 (51%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ +R+ G  V+A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MNFKGTTVIAIRRAGKTVVAADGQVTFGYTVLKSNAVKIRKLVNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K+   E     + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKVKSREDGIIDIKRAAVDLAKDWRADKILHKLEAMMLVADSDNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +EPE  V++IGSGG+YA SAA A M + + SA +IA KA+ IAA +C+YTN NIVLE +
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKALKIAARVCIYTNSNIVLEEI 179


>gi|152990745|ref|YP_001356467.1| ATP-dependent protease peptidase subunit [Nitratiruptor sp.
           SB155-2]
 gi|166222987|sp|A6Q3Q1|HSLV_NITSB RecName: Full=ATP-dependent protease subunit HslV
 gi|151422606|dbj|BAF70110.1| ATP-dependent protease HslVU, peptidase subunit HslV [Nitratiruptor
           sp. SB155-2]
          Length = 178

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 88/176 (50%), Positives = 122/176 (69%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  + DG+ VI GDGQV+ G TV+K NA K+R L  G I+AGFAGS+ADAF L 
Sbjct: 2   FEATTILGYKGDGIAVIGGDGQVTFGNTVLKGNATKIRTLYNGQILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  EK LE     LL+S +E +K+WR D+YLR LEAM+++ +     +++G GDV+EPE+
Sbjct: 62  DMFEKILENKKGDLLKSVIEFSKEWRKDRYLRRLEAMMIVLNTKHIFILSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             + AIGSGG++ALSAARAL       A+ +  +++ IA ++C+YTN NI L TL+
Sbjct: 122 GKIAAIGSGGNFALSAARALDKHANLDAKTLVEESLKIAGELCIYTNTNIKLLTLE 177


>gi|168703140|ref|ZP_02735417.1| ATP-dependent protease peptidase subunit [Gemmata obscuriglobus UQM
           2246]
          Length = 178

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 93/175 (53%), Positives = 127/175 (72%), Gaps = 1/175 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ ATTIL VR      I GDGQV+LG  VMKA+ARKVR+L  G ++AGFAG++ADAF+L
Sbjct: 3   RIRATTILAVRTSNGAAIGGDGQVTLGNIVMKADARKVRKLYDGKVLAGFAGAAADAFSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L+R E+KL  +   + +++ ELAK+WR D+ LR LEAM+++ D+   L+++G GDV+ P 
Sbjct: 63  LDRFEQKLRDFQGSVPKAATELAKEWRTDRILRRLEAMLVVLDRDNLLLVSGTGDVISPT 122

Query: 132 NGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           + V+AIGSGG YALSAARALM  TQ    EI R  + IA D+C+YTN NI ++ L
Sbjct: 123 DNVLAIGSGGPYALSAARALMQHTQLKPAEIVRAGLEIAGDLCIYTNRNIDVQEL 177


>gi|253583754|ref|ZP_04860952.1| ATP-dependent protease peptidase subunit [Fusobacterium varium ATCC
           27725]
 gi|251834326|gb|EES62889.1| ATP-dependent protease peptidase subunit [Fusobacterium varium ATCC
           27725]
          Length = 177

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 95/175 (54%), Positives = 138/175 (78%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           + ATTI+ V+KDG V +AGDGQV+ G+ V K+NA+K+R++G   ++AGFAG++ADAF L+
Sbjct: 2   IRATTIIAVKKDGKVAVAGDGQVTFGEVVFKSNAKKIRKIGNYEVLAGFAGAAADAFALM 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ++ E KL+++   L ++SVELAKDWR DK LR L+AM+++ADK + L+++G GDV+EP+ 
Sbjct: 62  DKFENKLDEFGGNLKKASVELAKDWRTDKALRVLDAMLIVADKNMILILSGNGDVIEPDG 121

Query: 133 GVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            V AIGSGG+YA +AARAL+    + SAEEIA +AM+IA ++C+YTN NIV + L
Sbjct: 122 DVAAIGSGGNYAYAAARALVRNNKEMSAEEIAVEAMNIAGEMCIYTNLNIVYDVL 176


>gi|299133209|ref|ZP_07026404.1| 20S proteasome A and B subunits [Afipia sp. 1NLS2]
 gi|298593346|gb|EFI53546.1| 20S proteasome A and B subunits [Afipia sp. 1NLS2]
          Length = 192

 Score =  154 bits (390), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 121/181 (66%), Positives = 150/181 (82%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                A   H TTILTVRK G VV+ GDGQVS+GQTV+K+NA+KVRRLGKG++I GFAG+
Sbjct: 10  MQNSQAESWHGTTILTVRKGGKVVVGGDGQVSIGQTVIKSNAKKVRRLGKGDVIGGFAGA 69

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +ADAFTL ERLE KLEQYP QL R+ VELAKDWR D+YLR LEAM+++ADK ++LV+TG 
Sbjct: 70  TADAFTLFERLESKLEQYPGQLTRACVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGT 129

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           GDVLEPE+G++AIGSGG+YAL+AARAL  + + AE I R+++ IAADICVYTN N+ +ET
Sbjct: 130 GDVLEPEDGIIAIGSGGNYALAAARALSDSSHDAEAIVRRSLEIAADICVYTNRNLTIET 189

Query: 185 L 185
           L
Sbjct: 190 L 190


>gi|116333447|ref|YP_794974.1| ATP-dependent protease peptidase subunit [Lactobacillus brevis ATCC
           367]
 gi|116098794|gb|ABJ63943.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
           family T01B [Lactobacillus brevis ATCC 367]
          Length = 180

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 120/179 (67%), Gaps = 3/179 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADA 68
            VK  ATTI  VR +G   +AGDGQV++G+  +MK  A K+RR+    ++ GFAGS ADA
Sbjct: 2   PVKFEATTICAVRHNGHNAMAGDGQVTMGEKVIMKGTAHKIRRIYNNQVVVGFAGSVADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F L E+ E +L +Y   L R++VELAK WR D+ L+ LEA++++ DK   L+++G G+V+
Sbjct: 62  FNLEEKFEAQLNEYSGNLQRAAVELAKQWRSDQALQKLEALLIVMDKDEMLLVSGSGEVI 121

Query: 129 EPENGVMAIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            P++ ++AIGSGG++  A + A    +T  SA+EIA  A+ IA  I ++TN N++ E L
Sbjct: 122 APDDDILAIGSGGNFALAAATALHHHATDMSAKEIAESAIHIAGGIDIFTNENVISEEL 180


>gi|257469327|ref|ZP_05633421.1| ATP-dependent protease peptidase subunit [Fusobacterium ulcerans
           ATCC 49185]
 gi|317063574|ref|ZP_07928059.1| ATP-dependent protease peptidase subunit [Fusobacterium ulcerans
           ATCC 49185]
 gi|313689250|gb|EFS26085.1| ATP-dependent protease peptidase subunit [Fusobacterium ulcerans
           ATCC 49185]
          Length = 177

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 95/175 (54%), Positives = 135/175 (77%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           + ATTI+ V+KDG V +AGDGQV+ G+ V K NA+K+R++G   ++AGFAG++ADAF L+
Sbjct: 2   IRATTIIAVKKDGKVAVAGDGQVTFGEVVFKGNAKKIRKIGDYEVLAGFAGAAADAFALM 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ++ E KL+++   L ++SVELAKDWR DK LR L+AM+++ADK + L+++G GDV+EP+ 
Sbjct: 62  DKFENKLDEFGGNLKKASVELAKDWRTDKALRVLDAMLIVADKNMILILSGNGDVIEPDG 121

Query: 133 GVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            V AIGSGG+YA +AARAL+      SAEEIA +AM IA ++C+YTN NIV + L
Sbjct: 122 DVAAIGSGGNYAYAAARALIRNNKDMSAEEIAVEAMEIAGEMCIYTNLNIVYDVL 176


>gi|325982876|ref|YP_004295278.1| ATP-dependent protease HslVU, peptidase subunit [Nitrosomonas sp.
           AL212]
 gi|325532395|gb|ADZ27116.1| ATP-dependent protease HslVU, peptidase subunit [Nitrosomonas sp.
           AL212]
          Length = 173

 Score =  154 bits (389), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 96/172 (55%), Positives = 133/172 (77%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   V + GDGQV+LG  V K++ARKVRRL    I+AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGHHVALGGDGQVTLGAVVAKSSARKVRRLYHDKILAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE +   ++R++VELAKDWR D+ LR LEAM+++A++  TL++TG GD++EPE G+ 
Sbjct: 62  EGKLEAHNGHIMRAAVELAKDWRTDRILRRLEAMLVVANEEATLIVTGAGDIIEPELGIA 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGGSYAL+AARAL+ +T    +EI +KA++IA DIC+YTN + ++E + 
Sbjct: 122 AIGSGGSYALAAARALLENTDLPPQEIVKKALTIAGDICIYTNQDHIIEMID 173


>gi|114566379|ref|YP_753533.1| ATP-dependent protease peptidase subunit [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|122318543|sp|Q0AYP2|HSLV_SYNWW RecName: Full=ATP-dependent protease subunit HslV
 gi|114337314|gb|ABI68162.1| CodW component of CodWX peptidase. Threonine peptidase. MEROPS
           family T01B [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 178

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 89/177 (50%), Positives = 132/177 (74%), Gaps = 2/177 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             ATTI+ VRK     IAGDGQV+LG  T+MK NA K+RRL +G +IAGFAG+ ADAFTL
Sbjct: 2   FQATTIIAVRKGQQTAIAGDGQVTLGQNTIMKQNATKIRRLYEGKVIAGFAGAVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
             + E+KL+Q    L +++VE+A++WR D+ LR LEA++++AD     +++G G+++EP+
Sbjct: 62  FAKFEEKLKQAGGNLSKAAVEIAREWRSDRILRRLEALLIVADAEKIFIVSGSGELIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           +G+ AIGSGG+YAL+AARAL + ++ +A EIA +++ IA+ ICVYTN  I +E ++ 
Sbjct: 122 DGIAAIGSGGAYALAAARALNAFSELNAREIAVESLKIASGICVYTNEQISVEVIEK 178


>gi|332799167|ref|YP_004460666.1| ATP-dependent protease hslV [Tepidanaerobacter sp. Re1]
 gi|332696902|gb|AEE91359.1| ATP-dependent protease hslV [Tepidanaerobacter sp. Re1]
          Length = 177

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 91/176 (51%), Positives = 130/176 (73%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             ATTIL +  +    IAGDGQV+ G  T+MK +A+KVR++  G ++AGFAGS ADA TL
Sbjct: 2   FSATTILAMVNEKGAAIAGDGQVTFGQNTIMKHHAKKVRKIYNGEVLAGFAGSVADAITL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            E+ E KLE+    L +++VELAK+WR DK L+ LEA+++ ADK   LVI+G G+V+EP+
Sbjct: 62  FEKYEDKLEETHGNLEKAAVELAKEWRKDKMLQKLEALLITADKGHILVISGNGEVIEPD 121

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +G+ AIGSGGSYAL+AARAL   +   A++I  +++ IA++ICVYTN+ I +E+L+
Sbjct: 122 DGIAAIGSGGSYALAAARALNRYSDLPAQKIVEESLKIASEICVYTNNYISVESLR 177


>gi|114330627|ref|YP_746849.1| ATP-dependent protease peptidase subunit [Nitrosomonas eutropha
           C91]
 gi|122312891|sp|Q0AD36|HSLV_NITEC RecName: Full=ATP-dependent protease subunit HslV
 gi|114307641|gb|ABI58884.1| HslV component of HslUV peptidase, Threonine peptidase, MEROPS
           family T01B [Nitrosomonas eutropha C91]
          Length = 173

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 101/172 (58%), Positives = 128/172 (74%), Gaps = 1/172 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+   V + GDGQV+LG  V KA+ARKVRRL    ++AGFAG +ADAFTL ER 
Sbjct: 2   TTIVSVRRGRQVALGGDGQVTLGAVVAKASARKVRRLYHDKVLAGFAGGTADAFTLFERF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E KLE++   LLRS+VELAKDWR D+ LR LEAM+++AD   TL+ITG GDV+EPE G+ 
Sbjct: 62  EAKLEKHQGHLLRSAVELAKDWRTDRILRRLEAMLVVADHEATLIITGAGDVIEPEQGLA 121

Query: 136 AIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSGG+YA +AARAL+ +T     E   KA++IA DIC+YTN   V+E L 
Sbjct: 122 AIGSGGAYAQAAARALLENTNLGPAETVAKALTIAGDICIYTNQVHVIEQLD 173


>gi|51598556|ref|YP_072744.1| ATP-dependent protease peptidase subunit [Borrelia garinii PBi]
 gi|85542198|sp|Q661W9|HSLV_BORGA RecName: Full=ATP-dependent protease subunit HslV
 gi|51573127|gb|AAU07152.1| heat shock protein [Borrelia garinii PBi]
          Length = 182

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 90/182 (49%), Positives = 131/182 (71%), Gaps = 4/182 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ ++K+G  V+A DGQV  G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MGFKGTTVIAIKKNGKTVVAADGQVLFGHTVLKSNAIKIRKLLNGKILAGFAGSTSDAIT 60

Query: 71  LLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K++   +    + R++V+LAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKIKAKGDGLIDIKRAAVDLAKDWRSDKILHKLEAMMLVADSKNILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +EPE  V++IGSGG+YA SAA A M + + SA E+A +++ IAA +C+YTN NIVLE ++
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAFEVALRSLKIAARVCIYTNSNIVLEEIE 180

Query: 187 VG 188
             
Sbjct: 181 NE 182


>gi|149919852|ref|ZP_01908328.1| ATP-dependent protease peptidase subunit [Plesiocystis pacifica
           SIR-1]
 gi|149819299|gb|EDM78732.1| ATP-dependent protease peptidase subunit [Plesiocystis pacifica
           SIR-1]
          Length = 179

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 82/177 (46%), Positives = 121/177 (68%), Gaps = 1/177 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           + +TT+L VR+DG V +  DGQVS+G T++K +A KVR L +G I+AGFAGS+AD  TL 
Sbjct: 2   IRSTTVLCVRRDGRVALGADGQVSMGNTIVKGSASKVRALARGKILAGFAGSAADGLTLC 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E LE KLE       R+ VELAKDWR+D+  R LEA++++ADK  +L+++G GDV+E E+
Sbjct: 62  ELLEAKLEAVGGNFTRACVELAKDWRLDRRYRRLEALLIVADKDRSLLLSGTGDVIEAED 121

Query: 133 GVMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           G++AIGSGG+Y   +A   L  ++  A  +    + +A +ICV+TNH+  +  L+  
Sbjct: 122 GILAIGSGGNYALAAARALLRHSEMDARGLVEAGLQVAGEICVFTNHSATVLELEAN 178


>gi|187918170|ref|YP_001883733.1| ATP-dependent protease peptidase subunit [Borrelia hermsii DAH]
 gi|238689285|sp|B2S007|HSLV_BORHD RecName: Full=ATP-dependent protease subunit HslV
 gi|119861018|gb|AAX16813.1| ATP-dependent protease HslV [Borrelia hermsii DAH]
          Length = 180

 Score =  153 bits (388), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 91/179 (50%), Positives = 128/179 (71%), Gaps = 4/179 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT++ +R+ G   +A DGQV+ G TV+K+NA K+R+L  G I+AGFAGS++DA T
Sbjct: 1   MSFKGTTVIAIRRGGKTAVAADGQVTFGYTVLKSNAVKIRKLVNGRILAGFAGSTSDAIT 60

Query: 71  LLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L E+ E+K+   E     + R++VELAKDWR DK L  LEAM+L+AD    L+I+G GDV
Sbjct: 61  LFEKFEEKVKAREDGIIDIKRAAVELAKDWRSDKILHKLEAMMLVADSENILLISGTGDV 120

Query: 128 LEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +EPE  V++IGSGG+YA SAA A M + + SA +IA K++ +AA +C+YTN NIVLE +
Sbjct: 121 VEPEEDVISIGSGGNYAYSAALAYMENKKLSAADIAFKSLKVAAKVCIYTNSNIVLEEI 179


>gi|307720796|ref|YP_003891936.1| 20S proteasome A and subunit Bs [Sulfurimonas autotrophica DSM
           16294]
 gi|306978889|gb|ADN08924.1| 20S proteasome A and B subunits [Sulfurimonas autotrophica DSM
           16294]
          Length = 179

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 87/176 (49%), Positives = 119/176 (67%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  R     VI GDGQV+ G +V+K NA K+R L  G I+AGFAGS+ADAF L 
Sbjct: 2   FDATTILAYRGKNKSVIGGDGQVTFGDSVLKGNATKIRTLYHGKILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E+ LE     LL+S VE +K WR DK LR LEAM+++ +K    ++TG GDV+EPE+
Sbjct: 62  DMFEEFLENKKGDLLKSVVEFSKAWRKDKVLRRLEAMMIVLNKEHIFILTGNGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             + +IGSGG++A+SAARAL        E++ ++++ IAAD+C+YTNHNI    L+
Sbjct: 122 GEIASIGSGGNFAISAARALKKHASLDEEDLVKESLHIAADLCIYTNHNIKTLILE 177


>gi|28378505|ref|NP_785397.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
           WCFS1]
 gi|254556719|ref|YP_003063136.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
           JDM1]
 gi|300767451|ref|ZP_07077363.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308180662|ref|YP_003924790.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|47605686|sp|Q88W25|HSLV_LACPL RecName: Full=ATP-dependent protease subunit HslV
 gi|28271341|emb|CAD64246.1| ATP-dependent protease HslV [Lactobacillus plantarum WCFS1]
 gi|254045646|gb|ACT62439.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
           JDM1]
 gi|300495270|gb|EFK30426.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308046153|gb|ADN98696.1| ATP-dependent protease peptidase subunit [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 180

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 88/177 (49%), Positives = 129/177 (72%), Gaps = 3/177 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           K  ATTI  VR++G   +AGDGQV++G+  VMK  A KVRR+    ++ GFAGS ADAF 
Sbjct: 4   KFEATTICAVRQNGHNAMAGDGQVTMGEKVVMKGTAHKVRRIYNDQVVVGFAGSVADAFN 63

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +R EKKL ++   L R++VELA++WR D+ L+ LEA++++ +K   L+++G G+V+ P
Sbjct: 64  LEDRFEKKLNEFSGNLQRAAVELAQEWRSDQALQKLEALLIVMNKDDMLLVSGSGEVITP 123

Query: 131 ENGVMAIGSGGSYALSAARA--LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +N V+AIGSGG++AL+AARA  L +   SA+E+A  A+ IA DI ++TNHN++ ETL
Sbjct: 124 DNDVLAIGSGGNFALAAARAMQLHAKDMSAKEVAEAAIHIAGDIDIFTNHNVISETL 180


>gi|145348739|ref|XP_001418801.1| ClpYQ (HslUV)-type protease, proteolytic subunit HSLV (ClpQ)
           [Ostreococcus lucimarinus CCE9901]
 gi|144579031|gb|ABO97094.1| ClpYQ (HslUV)-type protease, proteolytic subunit HSLV (ClpQ)
           [Ostreococcus lucimarinus CCE9901]
          Length = 200

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 104/177 (58%), Positives = 133/177 (75%), Gaps = 2/177 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATT+L VRKDG  VI  DGQV++G  ++K N +KVR +  G ++ GFAG++ADAFTL E
Sbjct: 18  HATTVLCVRKDGETVIMADGQVTMGSEIVKPNVKKVRIIEPG-VVGGFAGATADAFTLFE 76

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           RLE++LEQ+P QL R+ VELAK WR DK+LR LEA +++ADK  +  ITG GDVLEP +G
Sbjct: 77  RLEQQLEQHPGQLTRACVELAKQWRTDKFLRKLEATMIVADKESSFQITGSGDVLEPHDG 136

Query: 134 VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           V+ IGSGGSYAL+AARAL+      A +IA+KAM+IAAD CVYTNHN   + +   D
Sbjct: 137 VIGIGSGGSYALAAARALVDVPGMKAFDIAKKAMTIAADTCVYTNHNFTHQIIGGPD 193


>gi|237752722|ref|ZP_04583202.1| heat shock protein [Helicobacter winghamensis ATCC BAA-430]
 gi|229376211|gb|EEO26302.1| heat shock protein [Helicobacter winghamensis ATCC BAA-430]
          Length = 177

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 84/176 (47%), Positives = 120/176 (68%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  + +   VI GDGQV+ G  V+K NA K+R L  G I++GFAGS+ADAF+L 
Sbjct: 2   FHATTILAYKSEKGAVIGGDGQVTFGNCVLKGNATKIRTLYHGKILSGFAGSTADAFSLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  LE     LL+S +E +K+WR DKYLR LEAM+++ DK    +++G GDV+EPE+
Sbjct: 62  DMFEGILENKKGDLLKSVMEFSKEWRKDKYLRRLEAMMIVLDKERIFILSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             + AIGSGG+YALSAARA+    +    +++  +++ IA ++C+YTN NI +  L
Sbjct: 122 GKIAAIGSGGNYALSAARAMDRFGSNLEPKDLVLESLKIAGELCIYTNQNIKILEL 177


>gi|269792952|ref|YP_003317856.1| 20S proteasome A and B subunits [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100587|gb|ACZ19574.1| 20S proteasome A and B subunits [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 178

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 94/176 (53%), Positives = 128/176 (72%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT++ VR+ G V +AGDGQV+LG  V+K  ARKVRRL K +++AGFAGS+ADA TL 
Sbjct: 4   LKGTTVVCVRRGGRVAMAGDGQVTLGAQVVKTRARKVRRL-KWDVLAGFAGSTADAMTLF 62

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E+ L+ +   +LR+SVEL K+WR D+ LR LEAM+L+AD   TL+++G GDVLE E 
Sbjct: 63  ERFERALDAHKGDVLRASVELVKEWRTDRVLRRLEAMMLVADLDRTLLLSGAGDVLEMEE 122

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
              +IGSG  YAL+AARAL+  T   A  +AR+++ IAA+IC+YTN N+ LE +  
Sbjct: 123 MCASIGSGSGYALAAARALLEGTDWDAPAVARRSLEIAAEICIYTNSNVTLEEIGR 178


>gi|313500976|gb|ADR62342.1| ATP-dependent protease hslV [Pseudomonas putida BIRD-1]
          Length = 162

 Score =  153 bits (387), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 96/162 (59%), Positives = 129/162 (79%), Gaps = 1/162 (0%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           + GDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER E +LE++   L+R
Sbjct: 1   MGGDGQVSLGNTVMKGNAKKVRRLYHGQVIAGFAGATADAFTLFERFEGQLEKHQGHLVR 60

Query: 89  SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
           ++VELAK+WR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++A+GSGG+YA +AA
Sbjct: 61  AAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEDGLIAMGSGGAYAQAAA 120

Query: 149 RALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           RAL++ T  SA EIA  A++IA DICV+TNHN+ +E   + D
Sbjct: 121 RALLNKTDLSAREIAETALNIAGDICVFTNHNLTIEEQDLAD 162


>gi|254459093|ref|ZP_05072516.1| ATP-dependent protease HslV [Campylobacterales bacterium GD 1]
 gi|207084364|gb|EDZ61653.1| ATP-dependent protease HslV [Campylobacterales bacterium GD 1]
          Length = 180

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 89/178 (50%), Positives = 122/178 (68%), Gaps = 2/178 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  +     VI GDGQV+ G +V+K NA K+R L +G I+AGFAGS+ADAF L 
Sbjct: 2   FDATTILAYKGKNKAVIGGDGQVTFGDSVLKGNATKIRTLHRGKILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E+ LE     LL+S +E +K WR DK LR LEAM+++ +     ++TG GDV+EPE+
Sbjct: 62  DMFEEFLEDKKGDLLKSVIEFSKAWRKDKVLRRLEAMMIVLNNDHIFILTGNGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + +IGSGG+YA+SAARAL    Q   EE+ R+++SIAAD+C+YTNH+I   TL+  
Sbjct: 122 GEIASIGSGGNYAISAARALKKHAQLDEEELVRESLSIAADLCIYTNHSIKTLTLEEN 179


>gi|227513450|ref|ZP_03943499.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           buchneri ATCC 11577]
 gi|227083323|gb|EEI18635.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           buchneri ATCC 11577]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 87/185 (47%), Positives = 128/185 (69%), Gaps = 3/185 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFA 62
           M +    +K  ATTI+ VR  G + +AGDGQV++G+  +MK  A KVRR+  G ++ GFA
Sbjct: 1   MKELIMPIKFEATTIVAVRHSGHLAMAGDGQVTMGEKVIMKGTAHKVRRIYGGKVVVGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           GS ADAF L ER EKKL QY   L RS+VELA+DWR D+ L+ LEA++++ +    L+++
Sbjct: 61  GSVADAFNLEERFEKKLSQYDGDLKRSAVELAQDWRGDQQLQKLEALLIVMNDKDLLLVS 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNI 180
           G G+V+EP++ ++AIGSGG++AL+AA A+       SA EIA  A+ IA +I ++TN N+
Sbjct: 121 GQGEVIEPDDDILAIGSGGNFALAAATAMKHNAQSMSAREIAEAAIHIAGNIDIFTNQNV 180

Query: 181 VLETL 185
           + E +
Sbjct: 181 ISEEI 185


>gi|227510441|ref|ZP_03940490.1| T01 family HslV component of HslUV peptidase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227524592|ref|ZP_03954641.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           hilgardii ATCC 8290]
 gi|227088267|gb|EEI23579.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           hilgardii ATCC 8290]
 gi|227190093|gb|EEI70160.1| T01 family HslV component of HslUV peptidase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 87/185 (47%), Positives = 128/185 (69%), Gaps = 3/185 (1%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFA 62
           M +    +K  ATTI+ VR  G + +AGDGQV++G+  +MK  A KVRR+  G ++ GFA
Sbjct: 1   MKELIMPIKFEATTIVAVRHSGHLAMAGDGQVTMGEKVIMKGTAHKVRRIYGGKVVVGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           GS ADAF L ER EKKL QY   L RS+VELA+DWR D+ L+ LEA++++ +    L+++
Sbjct: 61  GSVADAFNLEERFEKKLSQYDGDLKRSAVELAQDWRGDQQLQKLEALLIVMNDKDLLLVS 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNI 180
           G G+V+EP++ ++AIGSGG++AL+AA A+       SA EIA  A+ IA +I ++TN N+
Sbjct: 121 GQGEVIEPDDDILAIGSGGNFALAAATAMKHHAQSMSAREIAEAAIHIAGNIDIFTNQNV 180

Query: 181 VLETL 185
           + E +
Sbjct: 181 ISEEI 185


>gi|288573039|ref|ZP_06391396.1| 20S proteasome A and B subunits [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288568780|gb|EFC90337.1| 20S proteasome A and B subunits [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 175

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 92/174 (52%), Positives = 130/174 (74%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL VR+   V +AGDGQ++LG  ++K+N  KVRRL  G ++AGFAGS+ADA TLL
Sbjct: 2   FEGTTILCVRQGDKVAMAGDGQMTLGNQIIKSNTVKVRRLHGGTVLAGFAGSTADAMTLL 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E  EKKLE++   L+R++VEL K WR D+ LR LEAM+L+AD++ T++++G GD++EPE+
Sbjct: 62  ELFEKKLEEHGGNLMRAAVELGKQWRTDRMLRRLEAMMLVADRSHTILLSGAGDIIEPEH 121

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
              AIGSG +YAL+AARA M  +   A++IARK++ IA+ IC+YT+  I +E L
Sbjct: 122 DAAAIGSGSAYALAAARAYMECSGWDADKIARKSLEIASSICIYTDDVISMEVL 175


>gi|294102501|ref|YP_003554359.1| 20S proteasome A and B subunits [Aminobacterium colombiense DSM
           12261]
 gi|293617481|gb|ADE57635.1| 20S proteasome A and B subunits [Aminobacterium colombiense DSM
           12261]
          Length = 180

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 98/174 (56%), Positives = 132/174 (75%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTIL VR++  V +AGDGQV+LG  ++KA ARKVRRL KG ++AGFAGS+ADA TLL
Sbjct: 5   FKGTTILCVRQENSVAMAGDGQVTLGDQIIKAGARKVRRLYKGKVLAGFAGSTADAMTLL 64

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E +LE+    L+R++V L K+WR+D+ LR LEA++L+AD+  TL+++G GDVLEPEN
Sbjct: 65  ERFEARLEENSGDLMRAAVSLVKEWRLDRALRKLEALMLVADEEHTLLLSGAGDVLEPEN 124

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            V AIGSG  +AL+AARA M  +   A +IAR+A+ IAADIC+YT+  I +E +
Sbjct: 125 NVAAIGSGAGFALAAARAFMESSDKKASDIARRAIEIAADICIYTDKEITVEVI 178


>gi|296273491|ref|YP_003656122.1| 20S proteasome subunits AB [Arcobacter nitrofigilis DSM 7299]
 gi|296097665|gb|ADG93615.1| 20S proteasome A and B subunits [Arcobacter nitrofigilis DSM 7299]
          Length = 178

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 80/176 (45%), Positives = 118/176 (67%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  +     VI GDGQV+ G TV+K NA K+R L K  I+AGFAGS+ADAF L 
Sbjct: 2   FDATTILAYKAKDKAVIGGDGQVTFGNTVLKGNATKIRTLYKDKILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  LE     LL++ +  +K+WR DK LR LEAM+++ +K    +++G GDV+EPE+
Sbjct: 62  DMFESHLENTKGDLLKAVIAFSKEWRKDKVLRRLEAMMIVLNKEHIFILSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             + +IGSGG++A+SAARAL   +    E++ ++++ IA ++C+YTN NI L  ++
Sbjct: 122 GMIASIGSGGNFAISAARALQKHSNLDPEDLVKESLMIAGELCIYTNQNIKLLKIE 177


>gi|325108995|ref|YP_004270063.1| ATP dependent peptidase CodWX, CodW component [Planctomyces
           brasiliensis DSM 5305]
 gi|324969263|gb|ADY60041.1| ATP dependent peptidase CodWX, CodW component [Planctomyces
           brasiliensis DSM 5305]
          Length = 188

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 86/173 (49%), Positives = 129/173 (74%), Gaps = 1/173 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            +TTILTVRK   V IAGDGQV+ G  ++K + RK+RR+  GN++ GFAGS+ADAF+LLE
Sbjct: 13  RSTTILTVRKGNQVAIAGDGQVTYGDAILKQDTRKIRRILDGNVLVGFAGSTADAFSLLE 72

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R E K + +P  + R++ ELA+DWR D+ LR LEAM+++ +   +L++TG GDV+ P++G
Sbjct: 73  RFETKAKDFPGNIPRAATELARDWRTDRVLRKLEAMMVVINAEHSLLVTGQGDVVSPQDG 132

Query: 134 VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++ IGSGG+YA++AARAL   +  SA E+   ++ IA++I +YTN N+++E L
Sbjct: 133 IIGIGSGGNYAVAAARALTRYSDLSAREVVENSLKIASEIDIYTNDNLIVEEL 185


>gi|118474850|ref|YP_892167.1| ATP-dependent protease peptidase subunit [Campylobacter fetus
           subsp. fetus 82-40]
 gi|166221633|sp|A0RPN4|HSLV_CAMFF RecName: Full=ATP-dependent protease subunit HslV
 gi|118414076|gb|ABK82496.1| ATP-dependent protease HslV [Campylobacter fetus subsp. fetus
           82-40]
          Length = 180

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 86/170 (50%), Positives = 120/170 (70%), Gaps = 2/170 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HATTIL  + +   +I GDGQVS G TV+K NA K+R+L  G I+AGFAGS+ADAF L 
Sbjct: 2   FHATTILAYKGNKGSIIGGDGQVSFGNTVLKGNAVKIRKLLGGKILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E+ LE     LL++ +E +K+WR DK LR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMFERILESTKGDLLKAVIEFSKEWRKDKVLRKLEAMMLVLDREHIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNI 180
             + AIGSGG+YAL+AARAL      + EE+ ++++ IA +IC+YTN NI
Sbjct: 122 GKIAAIGSGGNYALAAARALDKFADINEEELVKESLKIAGEICIYTNTNI 171


>gi|242309066|ref|ZP_04808221.1| heat shock protein [Helicobacter pullorum MIT 98-5489]
 gi|239524490|gb|EEQ64356.1| heat shock protein [Helicobacter pullorum MIT 98-5489]
          Length = 178

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 85/177 (48%), Positives = 117/177 (66%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  + +   VI GDGQV+ G  V+K NA K+R L  G I++GFAGS+ADAFTL 
Sbjct: 2   FEATTILAYKTEKGAVIGGDGQVTFGNCVLKGNATKIRTLYHGKILSGFAGSTADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  LE     LL+S +E +K+WR DKYLR LEAM+++ DK    +++G GDV+EPE+
Sbjct: 62  DMFEGILENKKGDLLKSVMEFSKEWRKDKYLRRLEAMMIVLDKEKIFILSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             + AIGSGG+YALSAARAL           ++  +++ IA ++C+YTN NI +  L
Sbjct: 122 GKIAAIGSGGNYALSAARALDRFGKGDMEPRDLVLESLKIAGELCIYTNQNIKILEL 178


>gi|157737217|ref|YP_001489900.1| ATP-dependent protease peptidase subunit [Arcobacter butzleri
           RM4018]
 gi|315636931|ref|ZP_07892155.1| ATP-dependent protease HslV [Arcobacter butzleri JV22]
 gi|166918418|sp|A8ETF7|HSLV_ARCB4 RecName: Full=ATP-dependent protease subunit HslV
 gi|157699071|gb|ABV67231.1| heat shock protein HslVU, ATP-dependent protease subunit HslV
           [Arcobacter butzleri RM4018]
 gi|315478761|gb|EFU69470.1| ATP-dependent protease HslV [Arcobacter butzleri JV22]
          Length = 178

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 82/176 (46%), Positives = 117/176 (66%), Gaps = 2/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  +     VI GDGQV+ G TV+K NA K+R L K  I+AGFAGS+ADAF L 
Sbjct: 2   FDATTILAYKGKNKAVIGGDGQVTFGNTVLKGNATKIRTLYKDQILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  LE     LL+S +  +K+WR DK LR LEAM+++ +K    +++G GDV+EPE+
Sbjct: 62  DMFEGHLEACKGDLLKSVIAFSKEWRKDKVLRRLEAMMIVLNKEKIFILSGNGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
             + +IGSGG++A+SAARAL        EE+ ++++ IA ++C+YTN NI +  L+
Sbjct: 122 GAIASIGSGGNFAISAARALAKHSSLDEEELVKESLMIAGELCIYTNQNIKILKLE 177


>gi|308806509|ref|XP_003080566.1| COG5405: ATP-dependent protease HslVU (ISS) [Ostreococcus tauri]
 gi|116059026|emb|CAL54733.1| COG5405: ATP-dependent protease HslVU (ISS) [Ostreococcus tauri]
          Length = 391

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 100/177 (56%), Positives = 133/177 (75%), Gaps = 2/177 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            ATT+L +RK+GV  I  DGQV++G  ++K N +KVR +  G ++ GFAG++ADAFTL +
Sbjct: 39  RATTVLCIRKNGVTTIMADGQVTMGSEIVKPNVKKVRVIEPG-VVGGFAGATADAFTLFD 97

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           RLE++LEQ+P QL R+ VELAK WR DK+LR LEA +++ADK  +  ITG GDVLEP +G
Sbjct: 98  RLEQQLEQHPGQLTRACVELAKQWRTDKFLRKLEATMIVADKESSFQITGSGDVLEPHDG 157

Query: 134 VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           V+ IGSGGSYAL+AARAL+     S+ +IA+KAM+IAAD CVYTNHN   + +   D
Sbjct: 158 VIGIGSGGSYALAAARALVDVPGMSSFDIAKKAMTIAADTCVYTNHNFTWQIIGGDD 214


>gi|239994472|ref|ZP_04714996.1| ATP-dependent protease peptidase subunit [Alteromonas macleodii
           ATCC 27126]
          Length = 160

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 95/159 (59%), Positives = 125/159 (78%), Gaps = 1/159 (0%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           +AGDGQVSLG TVMK NARKVRRL    I+AGFAG +ADAFTL ER E KLE +   L +
Sbjct: 1   MAGDGQVSLGNTVMKGNARKVRRLYHDKILAGFAGGTADAFTLFERFEAKLEAHQGHLTK 60

Query: 89  SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
           ++VELAKDWR D+ LR LEA++ +AD+T + +ITG GDV++PE  ++AIGSGG+YA +AA
Sbjct: 61  AAVELAKDWRTDRALRKLEALLAVADETASFIITGNGDVVQPEQDLIAIGSGGNYAQAAA 120

Query: 149 RALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            AL+ +T+ SA+EIA KA++IA DICV+TNH+  ++ L 
Sbjct: 121 TALLENTELSAKEIAEKALTIAGDICVFTNHSQTVDVLD 159


>gi|217978697|ref|YP_002362844.1| ATP-dependent protease peptidase subunit [Methylocella silvestris
           BL2]
 gi|217504073|gb|ACK51482.1| 20S proteasome A and B subunits [Methylocella silvestris BL2]
          Length = 188

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 116/186 (62%), Positives = 143/186 (76%), Gaps = 5/186 (2%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M    + V  H TTI+ V+KDG  VI GDGQVS+GQT++K NA+KVRRL KG +I GFAG
Sbjct: 1   MTASDFPV-WHGTTIVLVKKDGRTVIGGDGQVSIGQTIVKGNAKKVRRLAKGEVIGGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLEQYP QL+R+ VELAKDWR D+YLR LEAM+L+AD    LV+TG
Sbjct: 60  ATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADAKAALVLTG 119

Query: 124 MGDVLEPE----NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
            GDVLEPE      VM IGSGG+YAL+AARAL+ T   A  IAR+A+ IA++ICVYTN +
Sbjct: 120 NGDVLEPEATERGSVMGIGSGGNYALAAARALLDTDRDAAAIARRALEIASEICVYTNRS 179

Query: 180 IVLETL 185
           +V+E +
Sbjct: 180 VVIEEI 185


>gi|91204119|emb|CAJ71772.1| strongly similar to ATP-dependent Hsl protease, peptidase subunit
           [Candidatus Kuenenia stuttgartiensis]
          Length = 178

 Score =  152 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 89/170 (52%), Positives = 125/170 (73%), Gaps = 1/170 (0%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTIL+VRK G V I GDGQV++  TV+K +A+K+RRL    ++ GFAGSSAD+F L+ER 
Sbjct: 8   TTILSVRKGGHVAIGGDGQVTMQATVVKHDAKKIRRLYHDKVLVGFAGSSADSFALMERF 67

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           + KLEQY   +LRS+ ELA++WR DK LR LE+++++ DK  + +I+G GDV+EP++G++
Sbjct: 68  DAKLEQYQGNVLRSAHELAREWRTDKVLRRLESLLVVVDKQHSFLISGSGDVIEPDDGII 127

Query: 136 AIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
            IGSGGSY   +A      T  S +EI  ++++IAADICVYTN NI +E 
Sbjct: 128 GIGSGGSYAVAAARALAKHTPLSVKEIVAESLNIAADICVYTNKNIKVEE 177


>gi|34557657|ref|NP_907472.1| ATP-dependent protease peptidase subunit [Wolinella succinogenes
           DSM 1740]
 gi|47605631|sp|Q7M8Z6|HSLV_WOLSU RecName: Full=ATP-dependent protease subunit HslV
 gi|34483374|emb|CAE10372.1| HEAT SHOCK PROTEIN [Wolinella succinogenes]
          Length = 176

 Score =  152 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 86/175 (49%), Positives = 119/175 (68%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  + +   VI GDGQV+ G  V+K NA K+R L  G I++GFAGS+ADAFTL 
Sbjct: 2   FEATTILAYKGENHSVIGGDGQVTFGNCVLKGNATKIRMLYNGKILSGFAGSTADAFTLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E  E+ LE     L++S ++ +K+WR DKYLR LEAM+++ D+    +++G GDV+EPE+
Sbjct: 62  EMFERILENRKGDLVKSVIDFSKEWRKDKYLRRLEAMMIVMDRERLFILSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             + AIGSGG+YALSAARAL         E+ R+++ IA ++C+YTN NI L  L
Sbjct: 122 GKIAAIGSGGNYALSAARALDKFADLPESELVRESLLIAGELCIYTNTNIKLLEL 176


>gi|325118172|emb|CBZ53723.1| putative heat shock protein hslv [Neospora caninum Liverpool]
          Length = 382

 Score =  152 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 99/215 (46%), Positives = 134/215 (62%), Gaps = 41/215 (19%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTIL VRK   V +AGDG VS GQ ++K NARK+RRL  G +I GFAG++AD FTLLE
Sbjct: 140 HATTILCVRKGDQVCVAGDGMVSQGQMIVKPNARKIRRLQDG-VICGFAGATADCFTLLE 198

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL--------------------------- 106
           +LE KLE+YP QLLRS VELAK WR D+YLR+L                           
Sbjct: 199 KLEAKLEEYPGQLLRSCVELAKQWRTDRYLRHLEVGQQKRSKKHEDLFPELHKDTKDCLA 258

Query: 107 ------------EAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
                        A++++ADK ++L ++G+GDVLE  +G++ +GSGG YA++AARAL   
Sbjct: 259 SKCVLSSNPRQSRAVLIVADKKMSLEVSGVGDVLESHDGILGVGSGGPYAVAAARALYDI 318

Query: 155 Q-NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
              SA EI +++M+IAA +C +TN  ++ E L+  
Sbjct: 319 DGLSAHEICKRSMAIAASMCCHTNDRVIFEVLENE 353


>gi|313884886|ref|ZP_07818638.1| ATP-dependent protease HslVU, peptidase subunit [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619577|gb|EFR31014.1| ATP-dependent protease HslVU, peptidase subunit [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 175

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 86/172 (50%), Positives = 127/172 (73%), Gaps = 4/172 (2%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  VRKD  + +AGDGQV++G+T +MK  ARK+RR+    ++ GFAG  ADA TL E 
Sbjct: 2   TTICAVRKDNQLAMAGDGQVTMGETVIMKGGARKLRRIYDDKVVVGFAGGVADAITLSEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            E+KL  +  QL+R+++E+AK WR D+ L+ LEA++++ D    L+++G G+V+EP++GV
Sbjct: 62  FEEKLRSHQGQLVRAAIEVAKQWRTDRSLQKLEALLIVMDNKDLLMVSGTGEVIEPDDGV 121

Query: 135 MAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           + IGSGG+YAL+AARA++   +    AEEIAR+A+ IA+ I VYTN NI++E
Sbjct: 122 LTIGSGGNYALAAARAMLRQGNPDLKAEEIAREALLIASQIDVYTNDNILVE 173


>gi|229824241|ref|ZP_04450310.1| hypothetical protein GCWU000282_01545 [Catonella morbi ATCC 51271]
 gi|229786595|gb|EEP22709.1| hypothetical protein GCWU000282_01545 [Catonella morbi ATCC 51271]
          Length = 174

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 83/172 (48%), Positives = 125/172 (72%), Gaps = 3/172 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  V+KD  + +AGDGQ+++GQ  +MK +ARK+RR+    ++ GFAG  ADA TL E 
Sbjct: 2   TTICAVKKDNQLAMAGDGQITMGQQVIMKGSARKIRRIYHNQVLVGFAGGVADAITLSEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            E KL ++  QL R++VELAK WR D+ L+ LEA++++ DK   L+++G G+V+EP++G+
Sbjct: 62  FETKLSEHQGQLTRAAVELAKSWRSDRTLQKLEALLIVMDKENLLMVSGTGEVIEPDDGI 121

Query: 135 MAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           + IGSGG+YAL+AARAL     + SA +IA++A+ IA++I V+TN  I +E 
Sbjct: 122 LTIGSGGNYALAAARALKRNAPELSAVDIAKQALQIASEIDVFTNDQIRVEE 173


>gi|320450078|ref|YP_004202174.1| ATP-dependent protease HslVU, peptidase subunit [Thermus
           scotoductus SA-01]
 gi|320150247|gb|ADW21625.1| ATP-dependent protease HslVU, peptidase subunit [Thermus
           scotoductus SA-01]
          Length = 180

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 85/177 (48%), Positives = 122/177 (68%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAF 69
           +++H TTIL VRKDGV  +AGDGQV+ GQTV+K  A KVRRL  G  I+ GFAG  ADA 
Sbjct: 1   MEIHGTTILAVRKDGVTALAGDGQVTFGQTVLKRGAVKVRRLEVGEGILVGFAGGVADAL 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           +LLER E+KL++    LL+ +VE AK WR D+ LR+L+AMI+ AD+   ++++G G+V+ 
Sbjct: 61  SLLERFEEKLKEAKGNLLKGAVETAKLWRTDRVLRHLQAMIIAADREGMVLLSGSGEVIT 120

Query: 130 PENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           PE  ++A+GSGG     +A      +  SA EIA +A+ IAA++ +YT+  + + TL
Sbjct: 121 PEEPLLAVGSGGPYALAAAKALYRHSSLSAREIAEEALRIAAEVDLYTSGQVTVLTL 177


>gi|154148167|ref|YP_001406620.1| ATP-dependent protease peptidase subunit [Campylobacter hominis
           ATCC BAA-381]
 gi|166221634|sp|A7I279|HSLV_CAMHC RecName: Full=ATP-dependent protease subunit HslV
 gi|153804176|gb|ABS51183.1| ATP-dependent protease HslV [Campylobacter hominis ATCC BAA-381]
          Length = 181

 Score =  151 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 83/176 (47%), Positives = 124/176 (70%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTL 71
             ATTIL  +     +I GDGQV+ G TV+K  A K+R++G  G ++AGFAGS+ DAF L
Sbjct: 2   FKATTILAYKGKNGSIIGGDGQVTFGNTVLKGTATKIRKIGKDGKVLAGFAGSTTDAFNL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            +  EK LE   N LL+++V+ +K+WR DKYLR LEAM+L+ D+    +++G+GDV+EP+
Sbjct: 62  FDMFEKCLESAKNDLLKAAVDFSKEWRKDKYLRKLEAMMLVLDREHIFLLSGVGDVVEPD 121

Query: 132 N-GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +  + AIGSGG+YALSAARAL      + EE+ ++++ IA++IC+YTN++I    +
Sbjct: 122 DGKIAAIGSGGNYALSAARALDKFGNLNEEELVKESLKIASEICIYTNNHIKTYAI 177


>gi|313681856|ref|YP_004059594.1| 20S proteasome a and b subunits [Sulfuricurvum kujiense DSM 16994]
 gi|313154716|gb|ADR33394.1| 20S proteasome A and B subunits [Sulfuricurvum kujiense DSM 16994]
          Length = 177

 Score =  151 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 85/175 (48%), Positives = 122/175 (69%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  +     VI GDGQV+ GQTV+K NA K+R L  G ++AGFAGS+ADAF L 
Sbjct: 2   FDATTILAFKGKNKAVIGGDGQVTFGQTVLKNNATKIRTLYNGEVLAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E+ L Q   +L+++ ++ +K WR DK LR LEAM+++ ++    ++TG GDV+EPE+
Sbjct: 62  DMFEEHLTQRKGELIKAVIDFSKAWRKDKVLRRLEAMMIVLNQKHIFILTGNGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             + AIGSGGSYA+SAARAL   T    E + ++++++AAD+C+YTNHNI   +L
Sbjct: 122 GEIAAIGSGGSYAISAARALKKHTTLDEETLVKESLAVAADLCIYTNHNIKTLSL 176


>gi|304384960|ref|ZP_07367306.1| ATP-dependent protease HslVU [Pediococcus acidilactici DSM 20284]
 gi|304329154|gb|EFL96374.1| ATP-dependent protease HslVU [Pediococcus acidilactici DSM 20284]
          Length = 189

 Score =  151 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 88/190 (46%), Positives = 134/190 (70%), Gaps = 5/190 (2%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFA 62
           M +    VK  ATTI+ +  +G   +AGDGQV++G+  +MK  ARKVRR+  G +I GFA
Sbjct: 1   MKENIMPVKFDATTIIAINHNGENAMAGDGQVTMGEKFIMKGTARKVRRIYDGKVIVGFA 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           GS ADAF L E+ EKKL +Y   L R+SVELAK WR D+ L+ LEAM+++ D+    +++
Sbjct: 61  GSVADAFNLEEKFEKKLSEYSGNLQRASVELAKIWRGDQQLQKLEAMLIVMDQKEMYLVS 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNI 180
           G G+V+ P++G++AIGSGG++AL+AA+AL   +   +A+EIA+ A+++A DI ++TNHN+
Sbjct: 121 GSGEVIAPDDGILAIGSGGNFALAAAKALKQHAKDMTAKEIAKTAINVAGDIDIFTNHNV 180

Query: 181 VLETLKVGDE 190
           +   L   ++
Sbjct: 181 I--ALDFKED 188


>gi|168026447|ref|XP_001765743.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682920|gb|EDQ69334.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 460

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 107/218 (49%), Positives = 137/218 (62%), Gaps = 32/218 (14%)

Query: 1   MVVMGDKHYAVKMHA---TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
           MV    +H   +      TT+L VRKD  V+I GDGQV+LG  ++K N RKVRRLG   +
Sbjct: 1   MVAFSLRHMHTENRGMLGTTVLCVRKDNKVIIIGDGQVTLGNEIIKPNVRKVRRLGAN-V 59

Query: 58  IAGFAGSSADAFTLLERLEKKLEQYPNQ---LLRSSVELAKDWRMDKYLRNLEAMILIAD 114
           I GFAG +AD+FTL ERLE KLE++      L R++VELAK WR DK+LR L+A++++AD
Sbjct: 60  IGGFAGGTADSFTLFERLETKLEEHSGNVWQLTRAAVELAKAWRTDKFLRRLDAVMVVAD 119

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEI------------ 161
             I+L ITG GDVLEP +GV+ IGSGGSYA +AARAL+      AE I            
Sbjct: 120 AEISLTITGNGDVLEPYDGVIGIGSGGSYASAAARALIDLPDWGAEAIDIQSPNWDVDDC 179

Query: 162 ------------ARKAMSIAADICVYTNHNIVLETLKV 187
                       A+KAM IAAD C+YTNHN  +E ++V
Sbjct: 180 VLGCVLGVYDFSAKKAMKIAADCCIYTNHNFTIEQIEV 217


>gi|301632118|ref|XP_002945138.1| PREDICTED: ATP-dependent hsl protease ATP-binding subunit hslU-like
           [Xenopus (Silurana) tropicalis]
          Length = 490

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 92/167 (55%), Positives = 125/167 (74%), Gaps = 6/167 (3%)

Query: 12  KMHATTILTVRK--DGV---VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           + H TTIL+VR+        V I GDGQV+LG  V+K  ARKVR+L  G ++AGFAG++A
Sbjct: 3   QFHGTTILSVRRLRADGSTDVAIGGDGQVTLGNIVVKGTARKVRKLYHGKVLAGFAGATA 62

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ER E KLE++   L R+++EL KDWR D+ LR LEAM+ +AD   +L+ITG GD
Sbjct: 63  DAFTLFERFEAKLEKHQGHLTRAAIELTKDWRTDRVLRRLEAMLAVADHCASLIITGNGD 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADI 172
           VLEPE G++AIGSGG+YA SAA+AL+ +T+  AEE+ RK+++IA ++
Sbjct: 123 VLEPEQGIVAIGSGGAYAHSAAKALLANTELGAEEVVRKSLAIAGEL 169


>gi|313680129|ref|YP_004057868.1| ATP dependent peptidase codwx, codw component [Oceanithermus
           profundus DSM 14977]
 gi|313152844|gb|ADR36695.1| ATP dependent peptidase CodWX, CodW component [Oceanithermus
           profundus DSM 14977]
          Length = 177

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 89/172 (51%), Positives = 118/172 (68%), Gaps = 2/172 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MH TTIL V KDG   IAGDGQV+ G TVMK  A KVR+L    ++ GFAG+ ADA TLL
Sbjct: 1   MHGTTILAVHKDGETAIAGDGQVTFGDTVMKQGAVKVRKLEDD-VLVGFAGAVADALTLL 59

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ E++LE     L R++VE  K WR D+ LR LEAM+++AD    L+++G G+V+ P+ 
Sbjct: 60  EKFEEQLEIAKGSLKRAAVETVKLWRTDRILRQLEAMLIVADAREILLLSGTGEVIAPDE 119

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
            ++A+GSG  YALSAA+AL   T+  A EIA KA+ IAA+I +YTN N  + 
Sbjct: 120 PLVAVGSGAPYALSAAKALYRETRLGAAEIAEKALGIAAEIDLYTNGNATVL 171


>gi|224418106|ref|ZP_03656112.1| ATP-dependent protease peptidase subunit [Helicobacter canadensis
           MIT 98-5491]
 gi|253827433|ref|ZP_04870318.1| ATP-dependent protease peptidase subunit [Helicobacter canadensis
           MIT 98-5491]
 gi|313141641|ref|ZP_07803834.1| ATP-dependent protease HslVU [Helicobacter canadensis MIT 98-5491]
 gi|253510839|gb|EES89498.1| ATP-dependent protease peptidase subunit [Helicobacter canadensis
           MIT 98-5491]
 gi|313130672|gb|EFR48289.1| ATP-dependent protease HslVU [Helicobacter canadensis MIT 98-5491]
          Length = 178

 Score =  150 bits (379), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 84/177 (47%), Positives = 119/177 (67%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  + +   VI GDGQV+ G  V+K NA K+R L  G I++GFAGS+ADAF+L 
Sbjct: 2   FEATTILAYKTENGAVIGGDGQVTFGNCVLKGNATKIRTLYHGQILSGFAGSTADAFSLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  LE     LL+S +E +K+WR DKYLR LEAM+++ +K    +++G GDV+EPE+
Sbjct: 62  DMFEGILENKKGDLLKSVIEFSKEWRKDKYLRRLEAMMIVLNKEKIFILSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             + AIGSGG+YALSAARAL      Q   +++  +++ IA ++C+YTN NI +  L
Sbjct: 122 GRIAAIGSGGNYALSAARALDRFGGGQMQPKDLVLESLKIAGELCIYTNQNIKILEL 178


>gi|199599531|ref|ZP_03212919.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
           HN001]
 gi|229552210|ref|ZP_04440935.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           rhamnosus LMS2-1]
 gi|258508409|ref|YP_003171160.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
           GG]
 gi|258539623|ref|YP_003174122.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
           Lc 705]
 gi|199589572|gb|EDY97690.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
           HN001]
 gi|229314432|gb|EEN80405.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           rhamnosus LMS2-1]
 gi|257148336|emb|CAR87309.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
           [Lactobacillus rhamnosus GG]
 gi|257151299|emb|CAR90271.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
           [Lactobacillus rhamnosus Lc 705]
 gi|259649724|dbj|BAI41886.1| ATP-dependent protease peptidase subunit [Lactobacillus rhamnosus
           GG]
          Length = 174

 Score =  150 bits (379), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 85/171 (49%), Positives = 125/171 (73%), Gaps = 3/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  VRKDGV  +AGDGQV+LG+  +MK NA+KVRR+    ++ GFAG  ADAFTL + 
Sbjct: 2   TTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTLQDW 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            EKKLE Y   L RS+V LA+DWR D  L+ LEAM+++ D+   L+++G G+V++P+  V
Sbjct: 62  FEKKLEHYSGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPDEDV 121

Query: 135 MAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           +AIGSGG++A +AA A++      +  +IA++A++IA +I ++TNHNI++E
Sbjct: 122 VAIGSGGNFAQAAAIAMLRHSPDMTPADIAKEAVNIAGNIDIFTNHNIIVE 172


>gi|260583821|ref|ZP_05851569.1| heat shock protein HslV [Granulicatella elegans ATCC 700633]
 gi|260158447|gb|EEW93515.1| heat shock protein HslV [Granulicatella elegans ATCC 700633]
          Length = 175

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 82/173 (47%), Positives = 125/173 (72%), Gaps = 4/173 (2%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  V+K     IAGDGQ+++G+  +MK +ARK+RR+  G ++ GFAG  ADA TL E 
Sbjct: 2   TTICAVKKGNQSAIAGDGQITMGERIIMKGSARKIRRIFGGEVVVGFAGGVADAITLEEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            E +L+Q+   L R+++ELAK WR D+ L+ LEAM+++ +K   L+++G G+V+EP++G+
Sbjct: 62  FEDQLKQFKGNLQRAAIELAKQWRTDRTLQKLEAMLIVMNKDQLLLVSGTGEVIEPDDGI 121

Query: 135 MAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           + IGSGG++ALSAARAL+       SAE+IAR+++ +A++I VYTN  I+ E 
Sbjct: 122 LTIGSGGNFALSAARALLRFGDENLSAEDIARESLKVASEIDVYTNDAIITEV 174


>gi|107104153|ref|ZP_01368071.1| hypothetical protein PaerPA_01005226 [Pseudomonas aeruginosa PACS2]
          Length = 163

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 87/161 (54%), Positives = 121/161 (75%), Gaps = 2/161 (1%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           + GDGQVSLG TVMK NA+KVRRL  G ++AGFAG++ADAFTL ER E++LE++   L+R
Sbjct: 1   MGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERFEQQLEKHQGHLVR 60

Query: 89  SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSY--ALS 146
           ++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GDV+EPE+G++A+GSGG +  A +
Sbjct: 61  AAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLIAMGSGGGFAQAAA 120

Query: 147 AARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            A    + + SA E+A  A++IA  ICV+TN N+ +E L  
Sbjct: 121 LALLQHNAELSAREVAETALNIAGSICVFTNQNLTIEELDS 161


>gi|270290226|ref|ZP_06196451.1| ATP-dependent protease hslV [Pediococcus acidilactici 7_4]
 gi|270281007|gb|EFA26840.1| ATP-dependent protease hslV [Pediococcus acidilactici 7_4]
          Length = 184

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 87/184 (47%), Positives = 132/184 (71%), Gaps = 5/184 (2%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADA 68
            VK  ATTI+ +  +G   +AGDGQV++G+  +MK  ARKVRR+  G +I GFAGS ADA
Sbjct: 2   PVKFDATTIIAINHNGENAMAGDGQVTMGEKFIMKGTARKVRRIYDGKVIVGFAGSVADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F L E+ EKKL +Y   L R+SVELAK WR D+ L+ LEAM+++ D+    +++G G+V+
Sbjct: 62  FNLEEKFEKKLSEYSGNLQRASVELAKIWRGDQQLQKLEAMLIVMDQKEMYLVSGSGEVI 121

Query: 129 EPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            P++G++AIGSGG++AL+AA+AL   +   +A+EIA+ A+++A DI ++TNHN++   L 
Sbjct: 122 APDDGILAIGSGGNFALAAAKALKQHAKDMTAKEIAKTAINVAGDIDIFTNHNVI--ALD 179

Query: 187 VGDE 190
             ++
Sbjct: 180 FKED 183


>gi|209877204|ref|XP_002140044.1| proteasome A-type and B-type, ATP-dependent protease
           [Cryptosporidium muris RN66]
 gi|209555650|gb|EEA05695.1| proteasome A-type and B-type, ATP-dependent protease, putative
           [Cryptosporidium muris RN66]
          Length = 208

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 97/177 (54%), Positives = 130/177 (73%), Gaps = 4/177 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H+TTIL+VR    +V+ GDGQVS G  V+K NARK+R++G   I+ GF+G++AD FTL+
Sbjct: 34  WHSTTILSVRTKNSLVMIGDGQVSQGNLVVKPNARKIRKIGN--IVLGFSGATADCFTLV 91

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KL+ Y  QL R+ VELA+ WR +KYLR+L+A+I+ ADK +TL +TG GDVLE  +
Sbjct: 92  ERLESKLDNYSGQLTRACVELARSWRTEKYLRHLQAVIIAADKNVTLQLTGNGDVLESYD 151

Query: 133 GVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            +MAIGSGG YA +AARAL+  + +  A  +A  AM IAAD+CV TNHN V+E +  
Sbjct: 152 NIMAIGSGGPYAAAAARALVYSNLELDALYVATSAMKIAADMCVMTNHNFVIEEISR 208


>gi|227535112|ref|ZP_03965161.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239631510|ref|ZP_04674541.1| ATP-dependent protease hslV [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|227187253|gb|EEI67320.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239525975|gb|EEQ64976.1| ATP-dependent protease hslV [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 176

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 85/174 (48%), Positives = 126/174 (72%), Gaps = 3/174 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           M  TTI  VRKDGV  +AGDGQV+LG+  +MK NA+KVRR+    ++ GFAG  ADAFTL
Sbjct: 1   MTMTTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTL 60

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            +  EKKLE Y   L RS+V LA+DWR D  L+ LEAM+++ D+   L+++G G+V++P+
Sbjct: 61  QDWFEKKLEHYAGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPD 120

Query: 132 NGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
             V+AIGSGG++A +AA A++      +  +IA++A++IA +I ++TNHN+++E
Sbjct: 121 EDVVAIGSGGNFAQAAAIAMLRHAPDMTPADIAKEAVNIAGNIDIFTNHNVIVE 174


>gi|116494890|ref|YP_806624.1| ATP-dependent protease peptidase subunit [Lactobacillus casei ATCC
           334]
 gi|191638401|ref|YP_001987567.1| ATP-dependent protease peptidase subunit [Lactobacillus casei BL23]
 gi|301066450|ref|YP_003788473.1| ATP-dependent protease HslVU peptidase subunit [Lactobacillus casei
           str. Zhang]
 gi|122263692|sp|Q039E0|HSLV_LACC3 RecName: Full=ATP-dependent protease subunit HslV
 gi|238693038|sp|B3WEA8|HSLV_LACCB RecName: Full=ATP-dependent protease subunit HslV
 gi|116105040|gb|ABJ70182.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Lactobacillus casei ATCC 334]
 gi|190712703|emb|CAQ66709.1| ATP-dependent protease hslV [Lactobacillus casei BL23]
 gi|300438857|gb|ADK18623.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Lactobacillus casei str. Zhang]
 gi|327382430|gb|AEA53906.1| HslV [Lactobacillus casei LC2W]
 gi|327385629|gb|AEA57103.1| HslV [Lactobacillus casei BD-II]
          Length = 174

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 84/171 (49%), Positives = 125/171 (73%), Gaps = 3/171 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  VRKDGV  +AGDGQV+LG+  +MK NA+KVRR+    ++ GFAG  ADAFTL + 
Sbjct: 2   TTIAAVRKDGVTALAGDGQVTLGEKVIMKGNAQKVRRIYHDQVVIGFAGGVADAFTLQDW 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
            EKKLE Y   L RS+V LA+DWR D  L+ LEAM+++ D+   L+++G G+V++P+  V
Sbjct: 62  FEKKLEHYAGNLRRSAVALAQDWRKDPTLQKLEAMMIVMDEHDLLLVSGSGEVIDPDEDV 121

Query: 135 MAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHNIVLE 183
           +AIGSGG++A +AA A++      +  +IA++A++IA +I ++TNHN+++E
Sbjct: 122 VAIGSGGNFAQAAAIAMLRHAPDMTPADIAKEAVNIAGNIDIFTNHNVIVE 172


>gi|229086383|ref|ZP_04218559.1| ATP-dependent protease hslV [Bacillus cereus Rock3-44]
 gi|228696899|gb|EEL49708.1| ATP-dependent protease hslV [Bacillus cereus Rock3-44]
          Length = 161

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 90/161 (55%), Positives = 121/161 (75%), Gaps = 4/161 (2%)

Query: 29  IAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           +AGDGQV+ G   VMK  ARKVR+L +G ++AGFAGS ADAFTL E  E KLE+Y   L 
Sbjct: 1   MAGDGQVTFGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQ 60

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           R++VE+AK WR DK LR LEAM+++ D+T  L+++G G+V+EP++G++AIGSGG YAL+A
Sbjct: 61  RAAVEMAKQWRGDKMLRQLEAMLIVMDQTTLLLVSGTGEVIEPDDGILAIGSGGHYALAA 120

Query: 148 ARALMST---QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            RAL        +A+ IA+ ++ IA DICVYTNHNI++E L
Sbjct: 121 GRALKQHASDHLTAKAIAKASLEIAGDICVYTNHNIIVEEL 161


>gi|303272345|ref|XP_003055534.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463508|gb|EEH60786.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 230

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 102/178 (57%), Positives = 128/178 (71%), Gaps = 2/178 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATT+L VRK   VV+  DGQV+LG  V+K N +KVRRL  G +      ++ DAFTL E
Sbjct: 28  HATTVLCVRKGDEVVVMADGQVTLGSQVIKPNVKKVRRLSGGVVGGFAGATA-DAFTLFE 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           RLE KLE++P QL R++VELAK WR DKYLR LEA +++ADK  T  ITG GDV+EP +G
Sbjct: 87  RLEMKLEEHPGQLTRAAVELAKAWRNDKYLRRLEATMIVADKDHTFQITGGGDVIEPHDG 146

Query: 134 VMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           V+ IGSGGS+A +AARALM      A +IA K+M+IAAD CVYTNHN + ET+   D+
Sbjct: 147 VVGIGSGGSFATAAARALMDIDGMDALKIATKSMNIAADACVYTNHNFITETIGPNDD 204


>gi|55980600|ref|YP_143897.1| ATP-dependent protease peptidase subunit [Thermus thermophilus HB8]
 gi|55772013|dbj|BAD70454.1| heat shock protein HslV [Thermus thermophilus HB8]
          Length = 188

 Score =  148 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 84/177 (47%), Positives = 122/177 (68%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAF 69
           V++H TTIL VRKDGV  +AGDGQV+ GQTV+K  A KVR+L  G  ++ GFAG  ADA 
Sbjct: 9   VEIHGTTILAVRKDGVTALAGDGQVTFGQTVLKRGAVKVRKLEVGEGVLVGFAGGVADAL 68

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            LLER E++L++    LL+ +VE AK WR D+ LR+L+AMI+ AD+   ++++G G+V+ 
Sbjct: 69  ALLERFEERLKEAKGNLLKGAVETAKLWRTDRVLRHLQAMIVAADRESMVLLSGSGEVIT 128

Query: 130 PENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           PE  ++A+GSGG     +A      T  SA+EIA +A+ IAA++ +YT+  + + TL
Sbjct: 129 PEEPLLAVGSGGPYALAAAKALYRHTGLSAKEIATEALRIAAEVDLYTSGQVTVLTL 185


>gi|124516259|gb|EAY57767.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit HslV
           [Leptospirillum rubarum]
 gi|206603100|gb|EDZ39580.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Leptospirillum sp. Group II '5-way CG']
          Length = 180

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 86/172 (50%), Positives = 126/172 (73%), Gaps = 1/172 (0%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           ++VR+   V + GDGQ++LG  ++KA +RKVR L +G ++AGFAGS+ADA TL ER E  
Sbjct: 1   MSVRRGDRVALGGDGQITLGTMIVKARSRKVRSLYQGRVLAGFAGSTADALTLFERFESM 60

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIG 138
           LE +   + R+SV LAKDWR D+ LR LEA++ +A K  T +I+G GDV+EPE G+++IG
Sbjct: 61  LESHQGHVGRASVALAKDWRTDRSLRRLEALLAVASKESTYLISGAGDVIEPEEGLLSIG 120

Query: 139 SGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           SG SYAL++AR L+  T  + EEI R+++S+AAD+ +YTNH + + +L  G+
Sbjct: 121 SGSSYALASARVLLKHTALTPEEIVRESLSVAADLDIYTNHEMTVLSLPSGE 172


>gi|315453298|ref|YP_004073568.1| ATP-dependent protease [Helicobacter felis ATCC 49179]
 gi|315132350|emb|CBY82978.1| ATP-dependent protease [Helicobacter felis ATCC 49179]
          Length = 181

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 83/179 (46%), Positives = 118/179 (65%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVR----KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            HATTIL  +         +I GDGQVS G  V+K NA K+R L  G I++GFAGS+ADA
Sbjct: 2   FHATTILGYKTHFEGKDYAIIGGDGQVSFGNCVLKGNATKIRTLYHGRILSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DK+LR LEAM+++ +K    +++G GDV+
Sbjct: 62  FSLFDMFERILEGKKGDLFKSVVDFSKEWRKDKFLRRLEAMMIVLNKQSIFILSGTGDVV 121

Query: 129 EPEN-GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EPE+  + AIGSGG+YALSAARAL    +   + +  +++ IA +IC+YTN NI +  L
Sbjct: 122 EPEDGKIAAIGSGGNYALSAARALDQFAKLPPKTLVEESLKIAGEICIYTNTNIKILEL 180


>gi|46198573|ref|YP_004240.1| ATP-dependent protease peptidase subunit [Thermus thermophilus
           HB27]
 gi|46196195|gb|AAS80613.1| ATP-dependent protease hslV [Thermus thermophilus HB27]
          Length = 188

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 84/177 (47%), Positives = 122/177 (68%), Gaps = 2/177 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAF 69
           V++H TTIL VRKDGV  +AGDGQV+ GQTV+K  A KVR+L  G  ++ GFAG  ADA 
Sbjct: 9   VEIHGTTILAVRKDGVTALAGDGQVTFGQTVLKRGAVKVRKLEVGEGVLVGFAGGVADAM 68

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            LLER E++L++    LL+ +VE AK WR D+ LR+L+AMI+ AD+   ++++G G+V+ 
Sbjct: 69  ALLERFEERLKEAKGNLLKGAVETAKLWRTDRVLRHLQAMIVAADRESMVLLSGSGEVIT 128

Query: 130 PENGVMAIGSGGS-YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           PE  ++A+GSGG     +A      T  SA+EIA +A+ IAA++ +YT+  + + TL
Sbjct: 129 PEEPLLAVGSGGPYALAAAKALYRHTGLSAKEIATEALRIAAEVDLYTSGQVTVLTL 185


>gi|304320678|ref|YP_003854321.1| Multispecific proteasome protease [Parvularcula bermudensis
           HTCC2503]
 gi|303299580|gb|ADM09179.1| Multispecific proteasome protease [Parvularcula bermudensis
           HTCC2503]
          Length = 180

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 95/178 (53%), Positives = 130/178 (73%), Gaps = 6/178 (3%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKA-NARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTIL V++   V + GDGQV+LG+ V+   +A+KVRRL  G +++GFAG +ADAFTLLER
Sbjct: 2   TTILAVQRGREVAVGGDGQVTLGERVVSKGDAKKVRRLADGAVLSGFAGGTADAFTLLER 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG- 133
           LE KLEQY  QLLRS+VELAKDWR D+YLR LEAM+++AD +  L+++G+GDV+EPE   
Sbjct: 62  LEGKLEQYRGQLLRSAVELAKDWRTDRYLRRLEAMLIVADASQMLMVSGLGDVIEPEKTG 121

Query: 134 ---VMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
              ++AIGSGGSY   +A     +T  SA EI  K++ IA+ + V+TN  +++ETL  
Sbjct: 122 DVGILAIGSGGSYAQAAATALAQNTDLSAREIVEKSLIIASGLDVFTNDRLIVETLTS 179


>gi|257459458|ref|ZP_05624567.1| heat shock protein HslV [Campylobacter gracilis RM3268]
 gi|257442883|gb|EEV18017.1| heat shock protein HslV [Campylobacter gracilis RM3268]
          Length = 182

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 87/176 (49%), Positives = 121/176 (68%), Gaps = 3/176 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTL 71
             ATTIL  +     VI GDGQV+ G TV+K NA K+R++G +GN++AGFAGS+ADAF L
Sbjct: 2   FEATTILAYKGAKGSVIGGDGQVTFGNTVLKGNATKIRKIGKEGNVLAGFAGSTADAFNL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
            +  EK L+     LLR+ +E +K WR DKYLR LEAM+L+ D+    +++G GDV+EP+
Sbjct: 62  FDMFEKCLDGAKGDLLRAVIEFSKQWRKDKYLRKLEAMMLVLDRKNIFLLSGTGDVVEPD 121

Query: 132 N-GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +  + AIGSGG+YALSAARAL        EE+ ++++ IA +IC+YTN NI    +
Sbjct: 122 DGKIAAIGSGGNYALSAARALDKFASLDEEELVKQSLKIAGEICIYTNENIKTYAI 177


>gi|312969316|ref|ZP_07783518.1| ATP-dependent protease hslV [Escherichia coli 2362-75]
 gi|312285863|gb|EFR13781.1| ATP-dependent protease hslV [Escherichia coli 2362-75]
 gi|313648819|gb|EFS13258.1| ATP-dependent protease hslV [Shigella flexneri 2a str. 2457T]
 gi|323177953|gb|EFZ63537.1| ATP-dependent protease hslV [Escherichia coli 1180]
          Length = 154

 Score =  147 bits (371), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 88/150 (58%), Positives = 116/150 (77%), Gaps = 1/150 (0%)

Query: 37  LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
           +G TVMK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L++++VELAKD
Sbjct: 1   MGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKD 60

Query: 97  WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQ 155
           WR D+ LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG YA +AARAL+ +T+
Sbjct: 61  WRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTE 120

Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETL 185
            SA EIA KA+ IA DIC+YTNH   +E L
Sbjct: 121 LSAREIAEKALDIAGDICIYTNHFHTIEEL 150


>gi|295111499|emb|CBL28249.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Synergistetes bacterium SGP1]
          Length = 180

 Score =  147 bits (370), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 92/174 (52%), Positives = 125/174 (71%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI+ VR    V +AGDGQV+LG  ++K+ ARKVR L  G I+ GFAGS+ADA TLL
Sbjct: 5   FTGTTIVCVRDGARVAMAGDGQVTLGSQIIKSGARKVRPLLGGKILTGFAGSTADAMTLL 64

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ER E  LEQ    L++ +V+L ++WRMDK LR LEAM+L AD+++TL+++G GD+LEPE 
Sbjct: 65  ERFENCLEQEKGDLMKGAVKLVREWRMDKALRRLEAMMLAADRSMTLLLSGAGDILEPEG 124

Query: 133 GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            V +IGSG  YAL+A RAL   T  S + IAR+A+ +A++IC+YT+  + LE L
Sbjct: 125 DVASIGSGSGYALAAGRALREATDWSPDRIARRAIELASEICIYTDSVVTLEVL 178


>gi|2851557|sp|P34065|PSB5_CHICK RecName: Full=Proteasome subunit beta type-5; AltName:
           Full=Macropain chain 1; AltName: Full=Multicatalytic
           endopeptidase complex chain 1; AltName: Full=Proteasome
           chain 1; AltName: Full=Proteasome subunit C1; Flags:
           Precursor
 gi|1906303|dbj|BAA19471.1| proteasome C1 subunit [Gallus gallus]
          Length = 256

 Score =  147 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    VV+A D + + G  +     +KV  +   +++   AG +AD     
Sbjct: 53  LHGTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINP-SLLGTMAGGAADCSFWE 111

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 112 RLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 171

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +         A+GSG SYA                A E+AR+A+  AA    Y+  ++ +
Sbjct: 172 EGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTV 231


>gi|302824784|ref|XP_002994032.1| hypothetical protein SELMODRAFT_431977 [Selaginella moellendorffii]
 gi|300138135|gb|EFJ04914.1| hypothetical protein SELMODRAFT_431977 [Selaginella moellendorffii]
          Length = 619

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 95/182 (52%), Positives = 122/182 (67%), Gaps = 23/182 (12%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +H    M  TT+L +RK+  VVI GDGQV++G  ++K N RKVRR+G+  +I GFAG   
Sbjct: 29  QHSDKGMIGTTVLCIRKNDSVVIIGDGQVTMGAEILKPNVRKVRRIGEN-VIGGFAG--- 84

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
                             QL R++VELAK WR DK+LR L+A++++AD  I+L ITG GD
Sbjct: 85  ------------------QLTRAAVELAKAWRTDKFLRRLDALMVVADAEISLTITGTGD 126

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           VLEP +G++ IGSGGSYA +AARALM      AE+IARKAM IAAD C+YTNHN  LET+
Sbjct: 127 VLEPYDGIVGIGSGGSYASAAARALMDLPDMDAEKIARKAMKIAADCCIYTNHNFTLETI 186

Query: 186 KV 187
           K 
Sbjct: 187 KR 188


>gi|223992737|ref|XP_002286052.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220977367|gb|EED95693.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 169

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 92/161 (57%), Positives = 124/161 (77%), Gaps = 1/161 (0%)

Query: 31  GDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSS 90
           GDG VS+G  ++K NA+K+RR+    +  GFAG++ADAFTLLERLE KL++YP QL RS 
Sbjct: 2   GDGMVSMGSVIVKPNAKKIRRIYPKTVGVGFAGTTADAFTLLERLEGKLDEYPGQLARSC 61

Query: 91  VELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
           VELAK WR DKYLR LEA +L+ADK  +  ITG GDVLE  +GV+ +GSG S+A++AARA
Sbjct: 62  VELAKGWRTDKYLRRLEASLLVADKKASFEITGNGDVLESHDGVLGVGSGSSFAIAAARA 121

Query: 151 LM-STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           LM +   SAE++ARKAM IA+++C+YTN N  +E+L + ++
Sbjct: 122 LMDNPDLSAEDVARKAMQIASEMCIYTNDNFTIESLAMVED 162


>gi|116492726|ref|YP_804461.1| ATP-dependent protease peptidase subunit [Pediococcus pentosaceus
           ATCC 25745]
 gi|122265810|sp|Q03FK3|HSLV_PEDPA RecName: Full=ATP-dependent protease subunit HslV
 gi|116102876|gb|ABJ68019.1| ATP dependent peptidase CodWX, CodW component, Threonine peptidase,
           MEROPS family T01B [Pediococcus pentosaceus ATCC 25745]
          Length = 184

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 86/183 (46%), Positives = 128/183 (69%), Gaps = 3/183 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADA 68
            VK  ATTI+ +  +G   +AGDGQV++G+  +MK  ARKVRR+  G +I GFAGS ADA
Sbjct: 2   PVKFDATTIIAISHNGENAMAGDGQVTMGEKFIMKGTARKVRRIYDGKVIVGFAGSVADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F L E+ EKKL +Y   L R+SVELAK WR D+ L+ LEAM+++ D+    +++G G+V+
Sbjct: 62  FNLEEKFEKKLSEYSGNLQRASVELAKIWRGDQQLQKLEAMLIVMDEKEMYLVSGSGEVI 121

Query: 129 EPENGVMAIGSGGSY--ALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            P++G++AIGSGG++  A + A    +TQ SA+E+A+ A+++A DI ++TNHN++    K
Sbjct: 122 APDDGILAIGSGGNFALAAAKALKKHATQVSAKEMAKTAINVAGDIDIFTNHNVIALDFK 181

Query: 187 VGD 189
             D
Sbjct: 182 EED 184


>gi|32265809|ref|NP_859841.1| ATP-dependent protease peptidase subunit [Helicobacter hepaticus
           ATCC 51449]
 gi|47605649|sp|Q7VJD3|HSLV_HELHP RecName: Full=ATP-dependent protease subunit HslV
 gi|32261858|gb|AAP76907.1| ATP-dependent protease subunit HslV/ClpQ [Helicobacter hepaticus
           ATCC 51449]
          Length = 180

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 83/179 (46%), Positives = 117/179 (65%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  +         +I GDGQV+ G  V+K NA K+R L  G I++GFAGS+ADA
Sbjct: 2   FEATTILGYKGEYNGKKCAIIGGDGQVTFGNCVLKNNATKIRTLYNGEILSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L+RS +E +K+WR DKYLR LEAM+++ +     +++G GDV+
Sbjct: 62  FSLFDMFERILEGRKGDLVRSVLEFSKEWRKDKYLRKLEAMMIVLNTEHIYILSGTGDVV 121

Query: 129 EPEN-GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EPE+  + AIGSGG+YALSAARAL +       EI   +++IA ++C+YTN NI +  L
Sbjct: 122 EPEDGTIAAIGSGGNYALSAARALHNYASLPPREIVEHSLAIAGELCIYTNTNIKILEL 180


>gi|297624296|ref|YP_003705730.1| 20S proteasome A and subunit Bs [Truepera radiovictrix DSM 17093]
 gi|297165476|gb|ADI15187.1| 20S proteasome A and B subunits [Truepera radiovictrix DSM 17093]
          Length = 202

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 89/179 (49%), Positives = 120/179 (67%), Gaps = 1/179 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           MH TTI+ V KDGV  IAGDGQV+LG T++K  A KVR L  G +I GFAG+ +DAFTLL
Sbjct: 1   MHGTTIVAVHKDGVTAIAGDGQVTLGDTIVKKGATKVRSLMDGRVITGFAGAVSDAFTLL 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           E+ E  L  Y   L+R++VE  K+WR D+ LRNLEAM+++AD    L ++G GDV+ P+ 
Sbjct: 61  EKFEGYLSTYRGNLMRAAVETVKEWRTDRMLRNLEAMLIVADAEQILTLSGAGDVIAPDE 120

Query: 133 GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
            + A+GSGG+YA +AA AL+     SA EIA  A+ IAADI +YT+    +  +    +
Sbjct: 121 PIAAVGSGGAYAQAAATALLRHSDMSAAEIAETALLIAADIDIYTSGTATVLKVPDTQD 179


>gi|297566079|ref|YP_003685051.1| 20S proteasome subunits A/B [Meiothermus silvanus DSM 9946]
 gi|296850528|gb|ADH63543.1| 20S proteasome A and B subunits [Meiothermus silvanus DSM 9946]
          Length = 182

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 92/174 (52%), Positives = 125/174 (71%), Gaps = 2/174 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFTL 71
           MHATTIL VRK+G   IAGDGQV+LGQT+MK +A KVRRL  G+ I+ GFAG+ ADA TL
Sbjct: 4   MHATTILAVRKNGQTAIAGDGQVTLGQTIMKTSAIKVRRLEVGSGILVGFAGAVADALTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LE+ E+ L      L R++VE  K WR D+ LRNLEAM+++AD    L+++G G+VL P+
Sbjct: 64  LEKFEEALGIAKGNLPRAAVETVKRWRTDRVLRNLEAMLIVADVENLLLLSGNGEVLSPD 123

Query: 132 NGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
             V+A+GSGG YALSAA+AL+  ++  A +IAR+++ IA +I +YT  N  +  
Sbjct: 124 EPVLAVGSGGPYALSAAKALLRYSELPAADIARESIQIAGEIDLYTTGNPTVLV 177


>gi|302334368|gb|ADL27419.1| proteasome subunit beta type [Pheronema raphanus]
          Length = 279

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
                 ++  H TT L  +  G V++A D + + G  +     +KV  +    ++   AG
Sbjct: 64  DPSSPKIEFDHGTTTLAFKYQGGVIVAVDSRATAGSWIASQTCKKVIEINPY-LLGTMAG 122

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKT 116
            +AD      RL ++   Y  +        A    +  +L   + M L         DK 
Sbjct: 123 GAADCSYWERRLAQECRLYELRNKERISVAAASKVLSNFLYYYKGMGLSVGTMICGWDKK 182

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +     D     + + ++GSG  YA     +      S   A E+ R+++  A    
Sbjct: 183 GPGLYYVDSDGTRMTHHMFSVGSGSVYAYGVLDSGYKWDLSDDEARELGRRSIYHATHRD 242

Query: 174 VYTNHNIVL 182
            Y+   + L
Sbjct: 243 AYSGGVVNL 251


>gi|254516117|ref|ZP_05128177.1| ATP-dependent protease HslV [gamma proteobacterium NOR5-3]
 gi|219675839|gb|EED32205.1| ATP-dependent protease HslV [gamma proteobacterium NOR5-3]
          Length = 156

 Score =  145 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 87/155 (56%), Positives = 116/155 (74%), Gaps = 1/155 (0%)

Query: 37  LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
           +G T+MK NARKVRRL K  ++AGFAG +ADAFTL E  E +LE++  QL+R++VELAK 
Sbjct: 1   MGNTIMKGNARKVRRLYKDQVLAGFAGGTADAFTLFELFEAQLEKHNGQLVRAAVELAKA 60

Query: 97  WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQ 155
           WR ++ LR LEA++ +ADK  +LVI+G GDV+EPEN ++AIGSGGS+A +AA AL+ +TQ
Sbjct: 61  WRTERSLRQLEALLAVADKETSLVISGNGDVIEPENNLIAIGSGGSFAQAAAMALLDNTQ 120

Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
            SA EI  K + IAADIC+YTN    +E L    +
Sbjct: 121 LSAREIVEKGLGIAADICIYTNEQRTIEQLDYETD 155


>gi|256851128|ref|ZP_05556517.1| heat shock induced protein HtpI [Lactobacillus jensenii 27-2-CHN]
 gi|260660552|ref|ZP_05861467.1| heat shock induced protein HtpI [Lactobacillus jensenii 115-3-CHN]
 gi|282932233|ref|ZP_06337677.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           jensenii 208-1]
 gi|297205993|ref|ZP_06923388.1| ATP-dependent protease peptidase subunit [Lactobacillus jensenii
           JV-V16]
 gi|256616190|gb|EEU21378.1| heat shock induced protein HtpI [Lactobacillus jensenii 27-2-CHN]
 gi|260548274|gb|EEX24249.1| heat shock induced protein HtpI [Lactobacillus jensenii 115-3-CHN]
 gi|281303628|gb|EFA95786.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           jensenii 208-1]
 gi|297149119|gb|EFH29417.1| ATP-dependent protease peptidase subunit [Lactobacillus jensenii
           JV-V16]
          Length = 176

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 79/173 (45%), Positives = 118/173 (68%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI++V+ +G   IAGDGQV+LG+  + K +A+K+RR+    ++ GFAG  ADA +L E 
Sbjct: 2   TTIVSVKHNGKTAIAGDGQVTLGEKYISKKSAKKIRRIYNNQVVIGFAGGVADAVSLEEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ L+AM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQSWRKDPTLQKLQAMLIAFNDKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG +A +AA A+        A EIA++A+ IAADI V+T+H I+ + +
Sbjct: 122 VAIGSGGYFAQAAAVAMTRHAKDMDASEIAKEAVGIAADIDVFTDHEIITDEI 174


>gi|224437277|ref|ZP_03658249.1| ATP-dependent protease peptidase subunit [Helicobacter cinaedi CCUG
           18818]
 gi|313143732|ref|ZP_07805925.1| ATP-dependent protease hslV [Helicobacter cinaedi CCUG 18818]
 gi|313128763|gb|EFR46380.1| ATP-dependent protease hslV [Helicobacter cinaedi CCUG 18818]
          Length = 180

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 118/179 (65%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  +         +I GDGQV+ G  V+K NA K+R L  G I++GFAGS+ADA
Sbjct: 2   FEATTILGYKGEFEGKKCAIIGGDGQVTFGNCVLKNNATKIRTLYNGQILSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L+RS +E +K+WR DKYLR LEAM+++ +     +++G GDV+
Sbjct: 62  FSLFDMFERILEGRKGDLVRSVLEFSKEWRKDKYLRKLEAMMIVLNTEHIYILSGTGDVV 121

Query: 129 EPEN-GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EPE+  + AIGSGG+YALSAARAL    Q   +E+  K++ IA ++CVYTN NI +  L
Sbjct: 122 EPEDGRIAAIGSGGNYALSAARALDRYAQIPPKELVEKSLHIAGELCVYTNTNIRILEL 180


>gi|284008946|emb|CBA75817.1| ATP-dependent protease HslV (heat shock protein) [Arsenophonus
           nasoniae]
          Length = 154

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 87/153 (56%), Positives = 116/153 (75%), Gaps = 1/153 (0%)

Query: 37  LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
           +G TVMK N RKVRRL    +IAGFAG +ADAFTL E  E+KLE +   L +++VELAKD
Sbjct: 1   MGNTVMKGNVRKVRRLYNDKVIAGFAGGTADAFTLFELFERKLELHQGHLTKAAVELAKD 60

Query: 97  WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQ 155
           WR D+ LR LEA++ +AD+  +L+ITG GDV++PEN ++AIGSGG+YA +AARAL+ +T+
Sbjct: 61  WRTDRMLRKLEALLAVADENSSLIITGNGDVIQPENDLIAIGSGGAYAQAAARALLENTE 120

Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            SA +I  KA++IA+DIC+YTNHN   E L   
Sbjct: 121 MSARDITEKALNIASDICIYTNHNFNFEELSSK 153


>gi|238855699|ref|ZP_04645996.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           jensenii 269-3]
 gi|260664454|ref|ZP_05865306.1| heat shock induced protein HtpI [Lactobacillus jensenii SJ-7A-US]
 gi|282932213|ref|ZP_06337660.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           jensenii 208-1]
 gi|313472146|ref|ZP_07812638.1| heat shock protein HslV [Lactobacillus jensenii 1153]
 gi|238831684|gb|EEQ24024.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           jensenii 269-3]
 gi|239529517|gb|EEQ68518.1| heat shock protein HslV [Lactobacillus jensenii 1153]
 gi|260561519|gb|EEX27491.1| heat shock induced protein HtpI [Lactobacillus jensenii SJ-7A-US]
 gi|281303663|gb|EFA95818.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           jensenii 208-1]
          Length = 176

 Score =  143 bits (362), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 79/173 (45%), Positives = 120/173 (69%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI++V+ +G   IAGDGQV+LG+  + K +A+K+RR+    ++ GFAG  ADA +L E 
Sbjct: 2   TTIVSVKHNGKTAIAGDGQVTLGEKYISKKSAKKIRRIYNNQVVIGFAGGVADAVSLEEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ L+AM++  ++   L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQSWRKDPTLQKLQAMLIAFNEKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG +A +AA A+     +  A EIA++A+ IAADI V+T+H I+ + +
Sbjct: 122 VAIGSGGYFAQAAAVAMTRHAKEMDASEIAKEAVGIAADIDVFTDHEIITDEI 174


>gi|1405323|dbj|BAA10932.1| LMPX of lamprey [Petromyzon marinus]
          Length = 273

 Score =  143 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+    ++  H TT L  +    V++A D + + G  +     +KV  +    ++   AG
Sbjct: 59  GESDVKIQFQHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAG 117

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +   + M L         DK 
Sbjct: 118 GAADCMYWERVLAKQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKK 177

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     + +     + A+GSG  YA     +      S EE   + R+A++ A    
Sbjct: 178 GPGLYYVDDEGMRLPGSMFAVGSGSPYAFGVLDSGYREDLSKEEAYDLGRRAIASATHRD 237

Query: 174 VYTNHNIVL 182
            Y+   + L
Sbjct: 238 AYSGGVVNL 246


>gi|152993267|ref|YP_001358988.1| ATP-dependent protease peptidase subunit [Sulfurovum sp. NBC37-1]
 gi|166223004|sp|A6QAX2|HSLV_SULNB RecName: Full=ATP-dependent protease subunit HslV
 gi|151425128|dbj|BAF72631.1| ATP-dependent protease HslVU, peptidase subunit HslV [Sulfurovum
           sp. NBC37-1]
          Length = 176

 Score =  143 bits (362), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 81/175 (46%), Positives = 117/175 (66%), Gaps = 2/175 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             ATTIL  + DG  VI GDGQV+ G TV+K+NA K+R L +G I+AGFAGS+ADAF L 
Sbjct: 2   FDATTILGYKADGKAVIGGDGQVTFGDTVLKSNATKIRTLYEGKILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E  L +    L +S +  +K WR DK+LR LEAM+++ +     +++G GDV+EP++
Sbjct: 62  DMFEGILAEKRGDLFKSVIGFSKMWRKDKHLRQLEAMMIVLNTEHIFILSGTGDVVEPQD 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             + AIGSGG+YA+SAARAL         E+ ++++ +A D+C+YTN NI +  L
Sbjct: 122 GKIAAIGSGGNYAISAARALDKHANLEPRELVQESLEVAGDLCIYTNKNIKILEL 176


>gi|47094601|ref|ZP_00232246.1| ATP-dependent protease HslV [Listeria monocytogenes str. 4b H7858]
 gi|47017025|gb|EAL07913.1| ATP-dependent protease HslV [Listeria monocytogenes str. 4b H7858]
          Length = 164

 Score =  143 bits (361), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 88/163 (53%), Positives = 117/163 (71%), Gaps = 4/163 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++HATTI  V+ DG   +AGDGQV+LG   VMK  A+KVRRL    +IAGFAGS ADAF
Sbjct: 1   MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL E+ E KL +Y   L R+SVELA+ WR D  LR LEAM+++ DK   L+++G G+V+E
Sbjct: 61  TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLLVSGTGEVIE 120

Query: 130 PENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIA 169
           P++G++AIGSGG+YAL+A RAL         A++IAR A+ IA
Sbjct: 121 PDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHALEIA 163


>gi|291276926|ref|YP_003516698.1| putative ATP-dependent protease [Helicobacter mustelae 12198]
 gi|290964120|emb|CBG39964.1| putative ATP-dependent protease [Helicobacter mustelae 12198]
          Length = 174

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 78/166 (46%), Positives = 112/166 (67%), Gaps = 2/166 (1%)

Query: 23  KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQY 82
                ++ GDGQV+ G  V+K+NA K+R+L    I++GFAGS+ADAF L +  E+ LE  
Sbjct: 9   GKKYAIVGGDGQVTFGNCVLKSNATKIRKLYNNRILSGFAGSTADAFWLFDMFEQILENK 68

Query: 83  PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG-VMAIGSGG 141
              L+R  +E +K WR DKYLR LEAM+++ DK    +++G GDV+EPE+  + +IGSGG
Sbjct: 69  KGDLVRGVLEFSKLWRKDKYLRKLEAMMIVLDKDHIFILSGTGDVVEPEDNKIASIGSGG 128

Query: 142 SYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +YALSAARAL   T     E+ + A++IA +IC+YTN NI +  L+
Sbjct: 129 NYALSAARALDRFTSLHPRELVQNALNIAGEICIYTNTNIKILELE 174


>gi|293380241|ref|ZP_06626322.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           crispatus 214-1]
 gi|312977300|ref|ZP_07789048.1| heat shock protein HslV [Lactobacillus crispatus CTV-05]
 gi|290923208|gb|EFE00130.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           crispatus 214-1]
 gi|310895731|gb|EFQ44797.1| heat shock protein HslV [Lactobacillus crispatus CTV-05]
          Length = 178

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 80/178 (44%), Positives = 118/178 (66%), Gaps = 3/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++ + TTI +VR +G   IAGDGQV+LG+  + KA ARK+RR+    ++ GFAG  ADA 
Sbjct: 1   MRFNMTTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAV 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           +L + LE KLE Y   L R++VE+A+ WR D  L+ L AM++  D    L+I+G G+VLE
Sbjct: 61  SLQDMLEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLE 120

Query: 130 PENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P+  V+AIGSGG++A +AA A+        A+EIA +A+ IA+ I V+T+  IV + +
Sbjct: 121 PDENVVAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDKIVTDEI 178


>gi|317010765|gb|ADU84512.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           SouthAfrica7]
          Length = 180

 Score =  143 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEFNNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL        +++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPKKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|328950839|ref|YP_004368174.1| ATP-dependent protease HslVU, peptidase subunit [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451163|gb|AEB12064.1| ATP-dependent protease HslVU, peptidase subunit [Marinithermus
           hydrothermalis DSM 14884]
          Length = 178

 Score =  143 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 85/174 (48%), Positives = 121/174 (69%), Gaps = 2/174 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++H TTI+ VRK+GV  IAGDGQV+LG TVMK  A KVR+L +G+++ GFAG+ ADAFTL
Sbjct: 3   RLHGTTIIAVRKEGVTAIAGDGQVTLGHTVMKHGAVKVRKL-EGDVLVGFAGAVADAFTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           LE+ E++L +    L R++VE  K WR D+ LR+LEAM++ ADK   L+++G G+V+ P+
Sbjct: 62  LEKFEEQLREAKGNLARAAVETVKLWRTDRVLRHLEAMLIAADKEQLLLLSGTGEVIAPD 121

Query: 132 NGVMAIGSG-GSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
             V+A+GSG      +A   L  +   A EIAR+A+ IA +I +YTN N  + T
Sbjct: 122 EPVLAVGSGAAYALAAAKALLAHSALPAPEIAREALRIAGEIDLYTNGNATVLT 175


>gi|237749803|ref|ZP_04580283.1| ATP-dependent protease subunit HslV/ClpQ [Helicobacter bilis ATCC
           43879]
 gi|229374553|gb|EEO24944.1| ATP-dependent protease subunit HslV/ClpQ [Helicobacter bilis ATCC
           43879]
          Length = 182

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 88/180 (48%), Positives = 120/180 (66%), Gaps = 6/180 (3%)

Query: 13  MHATTILTVRK-DGV---VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            HATTIL            VI GDGQVS G  VMK NA K+R L  G I++GFAGS+ADA
Sbjct: 2   FHATTILGYVGQKDGKPYGVIGGDGQVSFGNCVMKGNATKIRSLYNGKILSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     LL+S +E +K+WR DKYLR LEAM+++ + T   V++G GDV+
Sbjct: 62  FSLFDMFERILEGKKGDLLKSVMEFSKEWRKDKYLRRLEAMMIVLNATHIYVLSGTGDVV 121

Query: 129 EPEN-GVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           EPE+  + AIGSGG+YALSAARAL   +  + +++  +++ IA +IC+YTN NI L  + 
Sbjct: 122 EPEDGKIAAIGSGGNYALSAARALDKFSDIAPKDLVLESLKIAGEICIYTNTNIKLLEIT 181


>gi|157877319|ref|XP_001686982.1| hs1vu complex proteolytic subunit-like; hs1vu complex proteolytic
           subunit-like, threonine peptidase, Clan T(1), family T1B
           [Leishmania major]
 gi|68130057|emb|CAJ09365.1| hs1vu complex proteolytic subunit-like [Leishmania major strain
           Friedlin]
          Length = 214

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 92/183 (50%), Positives = 126/183 (68%), Gaps = 2/183 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           AV+   TTIL+VRK   V++ GD QV+LG+ ++  ++    R    N++ GFAGS+ADAF
Sbjct: 17  AVQARHTTILSVRKGSKVILIGDRQVTLGERIVAKSSACKLRKLNDNVVIGFAGSTADAF 76

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            L+E+LE KL  +P QL R++VELAKDWR D+ LR LEA +++  K  TL I G G+V+ 
Sbjct: 77  ALMEKLENKLNDFPEQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVIT 136

Query: 130 PE-NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           PE +G++AIGSGG+YA +AARAL+      AE IARKAM IA DI V++N N  +E L  
Sbjct: 137 PEADGIIAIGSGGTYAKAAARALIDVDGYDAERIARKAMRIATDIDVFSNSNWDVEILTR 196

Query: 188 GDE 190
            +E
Sbjct: 197 DEE 199


>gi|322490991|emb|CBZ26255.1| hs1vu complex proteolytic subunit-like,hs1vu complex proteolytic
           subunit-like, threonine peptidase, Clan T(1), family T1B
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 226

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 91/182 (50%), Positives = 125/182 (68%), Gaps = 2/182 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           AV+   TTIL+VRK   V++ GD QV+LG+ ++  ++    R    N++ GFAGS+ADAF
Sbjct: 17  AVQARHTTILSVRKGNKVILIGDRQVTLGERIVAKSSACKLRKLNDNVVIGFAGSTADAF 76

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            L+E+LE KL  +P QL R++VELAKDWR D+ LR LEA +++  K  TL I G G+V+ 
Sbjct: 77  ALMEKLENKLNDFPEQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVIT 136

Query: 130 PE-NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           PE +G++AIGSGG+YA +AARAL+      AE IARKAM IA DI V++N N  +E L  
Sbjct: 137 PEADGIIAIGSGGTYAKAAARALIDVDGYDAERIARKAMRIATDIDVFSNSNWDVEILTR 196

Query: 188 GD 189
            +
Sbjct: 197 EE 198


>gi|237736958|ref|ZP_04567439.1| ATP-dependent protease peptidase subunit [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420820|gb|EEO35867.1| ATP-dependent protease peptidase subunit [Fusobacterium mortiferum
           ATCC 9817]
          Length = 182

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 92/178 (51%), Positives = 132/178 (74%), Gaps = 2/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + + ATTI+ V+KDG V +AGDGQV+ G+ V K+NA+K+R++ K NI+AGFAG++ADAF 
Sbjct: 5   IMIKATTIIAVKKDGKVAMAGDGQVTFGEVVFKSNAKKIRKIEKYNIMAGFAGAAADAFA 64

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L+++ E KLE++   L +S+VELAKDWR DK LR L+AM+++ADK   LV++G GDV+EP
Sbjct: 65  LMDKFESKLEEFGGNLKKSAVELAKDWRNDKALRVLDAMLIVADKDTILVLSGNGDVIEP 124

Query: 131 ENGVMAIGSGGS--YALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           +  + AIGSGGS  YA + A  L       E+IA +AM+IA ++C+YTN NI  + +K
Sbjct: 125 DGDIAAIGSGGSYAYAAARALLLHGKDMPVEQIAIEAMAIAGEMCIYTNSNITYDVIK 182


>gi|307637193|gb|ADN79643.1| ATP-dependent protease [Helicobacter pylori 908]
 gi|325995782|gb|ADZ51187.1| ATP-dependent protease [Helicobacter pylori 2018]
 gi|325997378|gb|ADZ49586.1| ATP-dependent protease peptidase subunit [Helicobacter pylori 2017]
          Length = 180

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|322380635|ref|ZP_08054787.1| ATP-dependent protease, peptidase subunit [Helicobacter suis HS5]
 gi|321146957|gb|EFX41705.1| ATP-dependent protease, peptidase subunit [Helicobacter suis HS5]
          Length = 180

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 117/179 (65%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVR----KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            HATTIL  +         +I GDGQVS    ++K NA K+R L  G +++GFAGS+ADA
Sbjct: 2   FHATTILGYKTHFEGKDCAIIGGDGQVSFNNCILKGNATKIRTLHHGQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DK+LR LEAM+++ +K    +++G GDV+
Sbjct: 62  FSLFDMFERILEGKKGDLFKSVVDFSKEWRKDKFLRRLEAMMIVLNKQSIFILSGTGDVV 121

Query: 129 EPEN-GVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EPE+  + AIGSGG+YALSAARAL +      + +  +++ IA ++C+YTN NI +  L
Sbjct: 122 EPEDGKIAAIGSGGNYALSAARALDLFAHLPPKTLVEESLKIAGNLCIYTNQNIKILEL 180


>gi|260770841|ref|ZP_05879770.1| ATP-dependent protease HslV [Vibrio furnissii CIP 102972]
 gi|260614078|gb|EEX39268.1| ATP-dependent protease HslV [Vibrio furnissii CIP 102972]
          Length = 158

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 83/147 (56%), Positives = 114/147 (77%), Gaps = 1/147 (0%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
           MK NARKVRRL    ++AGFAG +ADAFTL ER E KL+ +   L +++VELAKDWR D+
Sbjct: 1   MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
            LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG++A +AA AL+ +T   A E
Sbjct: 61  ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNFAQAAAIALLENTDLDARE 120

Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
           IA+KA+ IA DICV+TNH+  +E L++
Sbjct: 121 IAQKALKIAGDICVFTNHHHTIEELEI 147


>gi|161507475|ref|YP_001577429.1| ATP-dependent protease peptidase subunit [Lactobacillus helveticus
           DPC 4571]
 gi|160348464|gb|ABX27138.1| ATP-dependent heat shock protein [Lactobacillus helveticus DPC
           4571]
 gi|323466639|gb|ADX70326.1| ATP-dependent protease HslVU [Lactobacillus helveticus H10]
          Length = 178

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 80/178 (44%), Positives = 119/178 (66%), Gaps = 3/178 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++ + TTI +VR +G   IAGDGQV+LG+  + KA ARK+RR+    +I GFAG  ADA 
Sbjct: 1   MRFNMTTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAV 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           +L + LE KLE Y   L R++VE+A+ WR D  L+ L AM++  +    L+I+G G+VLE
Sbjct: 61  SLQDMLEGKLEAYNGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNDKDLLLISGNGEVLE 120

Query: 130 PENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           P+  V+AIGSGG++A +AA A+        A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 121 PDENVVAIGSGGNFAQAAAIAMTRHANDMQADEIAHEAVKIASGIDVFTDDHIVTDEI 178


>gi|322378786|ref|ZP_08053215.1| ATP-dependent protease peptidase subunit [Helicobacter suis HS1]
 gi|321148816|gb|EFX43287.1| ATP-dependent protease peptidase subunit [Helicobacter suis HS1]
          Length = 180

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 117/179 (65%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVR----KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            HATTIL  +         +I GDGQVS    ++K NA K+R L  G I++GFAGS+ADA
Sbjct: 2   FHATTILGYKTHFEGKDCAIIGGDGQVSFNNCILKGNATKIRTLHHGQILSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DK+LR LEAM+++ +K    +++G GDV+
Sbjct: 62  FSLFDMFERILEGKKGDLFKSVVDFSKEWRKDKFLRRLEAMMIVLNKQSIFILSGTGDVV 121

Query: 129 EPEN-GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           EPE+  + AIGSGG+YALSAARAL S      + +  +++ IA ++C+YTN NI +  L
Sbjct: 122 EPEDGKIAAIGSGGNYALSAARALDSFAHLPPKTLVEESLKIAGNLCIYTNQNIKILEL 180


>gi|308184322|ref|YP_003928455.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           SJM180]
 gi|308060242|gb|ADO02138.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           SJM180]
          Length = 180

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|81428596|ref|YP_395596.1| ATP-dependent protease peptidase subunit [Lactobacillus sakei
           subsp. sakei 23K]
 gi|78610238|emb|CAI55287.1| ATP-dependent Hsl protease, proteolytic subunit HslV [Lactobacillus
           sakei subsp. sakei 23K]
          Length = 181

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 79/178 (44%), Positives = 119/178 (66%), Gaps = 10/178 (5%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  V+ +G   IAGDGQV++G+  V K +A+K+RR+    +  GFAG  ADAFTL E 
Sbjct: 2   TTICAVKHNGRTAIAGDGQVTMGEKFVTKDSAKKIRRIYDNKVAIGFAGGVADAFTLQEW 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE--- 131
            E+KLE+Y   L  ++V LA+DWR D  L+ LEAM++  ++T  L+I+G G+V+ P+   
Sbjct: 62  FEQKLEKYSGDLQHAAVALAQDWRKDPTLQKLEAMLIAINETDILLISGNGEVITPDTLA 121

Query: 132 ---NGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLE 183
              + V+A+GSGG++A +AA AL+     + +AE+I    ++IA  I VYTNHN+++E
Sbjct: 122 ESGDQVIAVGSGGNFAQAAATALILEGKPELTAEKIVETGVNIAGGIDVYTNHNVIVE 179


>gi|68510416|gb|AAY98499.1| LMP X [Swiftia exserta]
          Length = 268

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           GD +  ++  H TT L  +    V++A D + + G  +     +KV  +    ++   AG
Sbjct: 53  GDDNIKIQFAHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAG 111

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 112 GAADCSYWERVLAKQCRIYELRNKERISVAAASKLLANMVYYYRGMGLSMGTMICGWDKR 171

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +     D     N + ++GSG ++A     +      S   A ++  +A+  A    
Sbjct: 172 GPGLYYVDSDGSRLSNNIFSVGSGSTFAYGVLDSGYRPDLSVQEAYDLGERAIYHATHRD 231

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 232 AYSGGVVNM 240


>gi|82539122|ref|XP_723974.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478455|gb|EAA15539.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 200

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 9/173 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTIL         + GDG VS G  ++K NA+K+RRL    I+ GFAG++AD FTLL+
Sbjct: 36  HGTTILC-------CLIGDGMVSQGTMIVKGNAKKIRRLKDN-ILMGFAGATADCFTLLD 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           + E K+++YPNQLLRS VELAK WR D+YLR+LEA++++ADK   L +TG GDVLEP   
Sbjct: 88  KFETKIDEYPNQLLRSCVELAKLWRTDRYLRHLEAVLIVADKDTLLEVTGNGDVLEPSGN 147

Query: 134 VMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+  GSGG YA++AARAL      SA++IA KAM+IAAD+C +TNHN + ETL
Sbjct: 148 VLGTGSGGPYAMAAARALYDIENLSAKDIAYKAMNIAADMCCHTNHNFICETL 200


>gi|126309797|ref|XP_001377227.1| PREDICTED: similar to proteasome subunit LMP7 [Monodelphis
           domestica]
          Length = 351

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +G +AD      
Sbjct: 101 HGTTTLAFKFQHGVIVAVDSRASAGSYIATLHVNKVIEINPY-LLGTMSGCAADCQYWER 159

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 160 LLAKECRLYRLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDEN 219

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                  + + GSG SYA     +      S EE   + R+A+  A     Y+   + +
Sbjct: 220 GTRLSGTMFSTGSGNSYAYGVMDSGYRPDLSPEEAYDLGRRAIVHATHRDSYSGGFVNM 278


>gi|317013932|gb|ADU81368.1| ATP-dependent protease subunit HslV [Helicobacter pylori
           Gambia94/24]
          Length = 180

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++GMGDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGMGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|300812250|ref|ZP_07092688.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|300496764|gb|EFK31848.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           delbrueckii subsp. bulgaricus PB2003/044-T3-4]
 gi|325686013|gb|EGD28072.1| heat shock protein HslV [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 177

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 81/176 (46%), Positives = 118/176 (67%), Gaps = 3/176 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +V+ +G   IAGDGQV+LG   + K  A+K+RR+    ++ GFAG  ADA +L E 
Sbjct: 2   TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAKKIRRIYHDQVVIGFAGGVADAVSLQEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ LEAM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQSWRKDPTLQKLEAMVIAFNDQDLLLISGNGEVLEPDESV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           +AIGSGG YA +AA  ++      +A EIA++A++IAADI V+T+H IV + ++  
Sbjct: 122 VAIGSGGYYAQAAAVGMLRHASGMTASEIAKEAVNIAADIDVFTDHEIVTDEIEEK 177


>gi|326427299|gb|EGD72869.1| LMP X protein [Salpingoeca sp. ATCC 50818]
          Length = 292

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 69/188 (36%), Gaps = 12/188 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           D    ++  H TT L  +    V+IA D + S G  +     +KV  +    ++   AG 
Sbjct: 69  DSKVKIQFAHGTTTLGFKFQHGVIIAVDSRASAGSYIASQTVKKVIEINPY-LLGTMAGG 127

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L K+   +  +        A    +   + +   M L         DK  
Sbjct: 128 AADCSYWERVLAKECRLFELRNGERISVAAASKILANIVYHYRGMGLSMGTMICGWDKKG 187

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
             +     D     N + ++GSG +YA     A      S   A E+AR+A+  A     
Sbjct: 188 PGLFYVDSDGTRLTNNLFSVGSGSTYAYGVLDAGYRWDLSVEEAHELARRAIYHATFRDA 247

Query: 175 YTNHNIVL 182
           Y+  +I L
Sbjct: 248 YSGGHINL 255


>gi|104774157|ref|YP_619137.1| ATP-dependent protease peptidase subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116514250|ref|YP_813156.1| ATP-dependent protease peptidase subunit [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|103423238|emb|CAI98071.1| ATP-dependent protease HslVU (ClpYQ), peptidasesubunit
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|116093565|gb|ABJ58718.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|325125939|gb|ADY85269.1| ATP-dependent protease hslV [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 177

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 81/176 (46%), Positives = 118/176 (67%), Gaps = 3/176 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +V+ +G   IAGDGQV+LG   + K  A+K+RR+    ++ GFAG  ADA +L E 
Sbjct: 2   TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAKKIRRIYHDQVVIGFAGGVADAVSLQEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ LEAM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQSWRKDPALQKLEAMVIAFNDQDLLLISGNGEVLEPDESV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           +AIGSGG YA +AA  ++      +A EIA++A++IAADI V+T+H IV + ++  
Sbjct: 122 VAIGSGGYYAQAAAVGMLRHASGMTASEIAKEAVNIAADIDVFTDHEIVTDEIEEK 177


>gi|15645142|ref|NP_207312.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           26695]
 gi|11132781|sp|O25253|HSLV_HELPY RecName: Full=ATP-dependent protease subunit HslV
 gi|2313630|gb|AAD07583.1| heat shock protein (hslV) [Helicobacter pylori 26695]
          Length = 180

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGELNHKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++GMGDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGMGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|313123910|ref|YP_004034169.1| ATP-dependent protease hslv [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|11133031|sp|Q48734|HSLV_LACLE RecName: Full=ATP-dependent protease subunit HslV
 gi|1359911|emb|CAA59019.1| heat shock induced protein HtpI [Lactobacillus leichmannii]
 gi|312280473|gb|ADQ61192.1| ATP-dependent protease hslV [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 177

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 81/176 (46%), Positives = 119/176 (67%), Gaps = 3/176 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +V+ +G   IAGDGQV+LG   + K  A+K+RR+    ++ GFAG  ADA +L E 
Sbjct: 2   TTICSVKYNGQTAIAGDGQVTLGKSIIAKTTAKKIRRIYHDQVVIGFAGGVADAVSLQEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D+ L+ LEAM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQSWRKDQTLQKLEAMVIAFNDQDLLLISGNGEVLEPDESV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           +AIGSGG YA +AA  ++      +A EIA++A++IAADI V+T+H IV + ++  
Sbjct: 122 VAIGSGGYYAQAAAVGMLRHASGMTASEIAKEAVNIAADIDVFTDHEIVTDEIEEK 177


>gi|126654061|ref|ZP_01725887.1| ATP-dependent protease peptidase subunit [Bacillus sp. B14905]
 gi|169827114|ref|YP_001697272.1| ATP-dependent protease peptidase subunit [Lysinibacillus sphaericus
           C3-41]
 gi|238065884|sp|B1HQJ5|HSLV_LYSSC RecName: Full=ATP-dependent protease subunit HslV
 gi|126589441|gb|EAZ83588.1| ATP-dependent protease peptidase subunit [Bacillus sp. B14905]
 gi|168991602|gb|ACA39142.1| ATP-dependent protease hslV [Lysinibacillus sphaericus C3-41]
          Length = 181

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 100/178 (56%), Positives = 130/178 (73%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++HATTI  V  +G   +AGDGQV+LG   VMK  A+KVRRL  G ++AGFAGS ADAFT
Sbjct: 3   QIHATTIFAVHHNGGCAMAGDGQVTLGNAVVMKGTAKKVRRLFNGQVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KL +Y   L R++VE+AK WR DK LR LEAM+L+ DKT  L+++G G+V+EP
Sbjct: 63  LFEMFEGKLNEYNGNLQRAAVEVAKQWRGDKMLRQLEAMLLVMDKTTLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YALSA RAL        +A EIA  A+  AA+ICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKYAGETMTAREIAEAALETAAEICVFTNHNIIVEAL 180


>gi|261839653|gb|ACX99418.1| ATP-dependent protease peptidase subunit [Helicobacter pylori 52]
 gi|308061842|gb|ADO03730.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           Cuz20]
          Length = 180

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL +       ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|299536757|ref|ZP_07050065.1| ATP-dependent protease peptidase subunit [Lysinibacillus fusiformis
           ZC1]
 gi|298727769|gb|EFI68336.1| ATP-dependent protease peptidase subunit [Lysinibacillus fusiformis
           ZC1]
          Length = 181

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 101/178 (56%), Positives = 130/178 (73%), Gaps = 4/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++HATTI  V  +G   +AGDGQV+LG   VMK  ARKVRRL  G ++AGFAGS ADAFT
Sbjct: 3   QIHATTIFAVHHNGGCAMAGDGQVTLGNAVVMKGTARKVRRLFNGQVLAGFAGSVADAFT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E  E KL +Y   L R++VE+AK WR DK LR LEAM+L+ DKT  L+++G G+V+EP
Sbjct: 63  LFEMFEGKLNEYNGNLQRAAVEVAKQWRGDKMLRQLEAMLLVMDKTTLLLVSGTGEVIEP 122

Query: 131 ENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++G++AIGSGG+YALSA RAL        +A EIA  A+  AA+ICV+TNHNI++E L
Sbjct: 123 DDGILAIGSGGNYALSAGRALKKYAGETMTAREIAEAALETAAEICVFTNHNIIVEAL 180


>gi|308063689|gb|ADO05576.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           Sat464]
          Length = 180

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL +       ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|71021599|ref|XP_761030.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
 gi|46100884|gb|EAK86117.1| hypothetical protein UM04883.1 [Ustilago maydis 521]
          Length = 451

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++  D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 26  HGTTTLAFRFRGGIIVCVDSRATAGSYIASGTVKKVIEINPY-LLGTMAGGAADCQYWET 84

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +  +        A    +   + + + M L         DKT   +     D
Sbjct: 85  YLGIQCRLHELRNKERISVAAASKYLSNLVYSYKGMGLSMGTMICGWDKTGPALFYVDSD 144

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +  V ++GSG ++A            S   A+E+ R+++  AA    Y+ + + L
Sbjct: 145 GNRLKGDVFSVGSGSTFAYGVLDQGYKWDLSDEEAQELGRRSIYAAAHRDAYSGNTVNL 203


>gi|332187360|ref|ZP_08389098.1| proteasome A-type and B-type family protein [Sphingomonas sp. S17]
 gi|332012521|gb|EGI54588.1| proteasome A-type and B-type family protein [Sphingomonas sp. S17]
          Length = 153

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 104/150 (69%), Positives = 128/150 (85%)

Query: 37  LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD 96
           +GQTVMK NARKVRRLG G++I GFAG++ADAFTL ERLE KLE++  QLLR++VELAKD
Sbjct: 1   MGQTVMKPNARKVRRLGDGSVIGGFAGATADAFTLFERLEAKLERHNGQLLRAAVELAKD 60

Query: 97  WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
           WR DK+LRNLEAM+++ADK +TL++TG GDVLEPENG+ AIGSGG+YAL+AARAL   + 
Sbjct: 61  WRTDKFLRNLEAMMIVADKDVTLILTGNGDVLEPENGICAIGSGGNYALAAARALDDYEQ 120

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLK 186
            AE IARKAM+IAAD+CVYTN  + LE + 
Sbjct: 121 DAETIARKAMAIAADVCVYTNDRVTLEAID 150


>gi|261838241|gb|ACX98007.1| heat shock protein, protease subunit [Helicobacter pylori 51]
          Length = 180

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNRVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL +       ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|258590895|emb|CBE67190.1| ATP-dependent protease hslV (protease subunit of a proteasome-like
           degradation complex) [NC10 bacterium 'Dutch sediment']
          Length = 159

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 92/159 (57%), Positives = 119/159 (74%), Gaps = 1/159 (0%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++AGDGQVS G+TVMK  ARKVRRL    +IAGFAG++ADAF L  R E KLE +   L 
Sbjct: 1   MVAGDGQVSFGETVMKQTARKVRRLWNDRVIAGFAGAAADAFALQSRFEAKLEAFSGNLP 60

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           R++VELAKDWR D+ LR LEA+++  D+  +LVI+G GDV+EP++GV+ IGSGG YA++A
Sbjct: 61  RAAVELAKDWRTDRALRRLEALLVAVDREHSLVISGTGDVIEPDDGVVGIGSGGQYAVAA 120

Query: 148 ARALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ARAL+  ++  A  IA +AM IAA ICVYTN  I +E L
Sbjct: 121 ARALIGFSELDARRIAEEAMKIAASICVYTNDTITIEEL 159


>gi|262166684|ref|ZP_06034421.1| ATP-dependent protease HslV [Vibrio mimicus VM223]
 gi|262170393|ref|ZP_06038071.1| ATP-dependent protease HslV [Vibrio mimicus MB-451]
 gi|261891469|gb|EEY37455.1| ATP-dependent protease HslV [Vibrio mimicus MB-451]
 gi|262026400|gb|EEY45068.1| ATP-dependent protease HslV [Vibrio mimicus VM223]
          Length = 156

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 84/147 (57%), Positives = 113/147 (76%), Gaps = 1/147 (0%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
           MK NARKVRRL    ++AGFAG +ADAFTL ER E KL+ +   L +++VELAKDWR D+
Sbjct: 1   MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
            LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T   A  
Sbjct: 61  ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTDLDART 120

Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
           IA KA++IA DICV+TNHN  +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHNHTIEELEI 147


>gi|108562914|ref|YP_627230.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           HPAG1]
 gi|123247001|sp|Q1CU16|HSLV_HELPH RecName: Full=ATP-dependent protease subunit HslV
 gi|107836687|gb|ABF84556.1| heat shock protein [Helicobacter pylori HPAG1]
 gi|317009509|gb|ADU80089.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           India7]
 gi|317012331|gb|ADU82939.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           Lithuania75]
          Length = 180

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|196003382|ref|XP_002111558.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
 gi|190585457|gb|EDV25525.1| hypothetical protein TRIADDRAFT_55706 [Trichoplax adhaerens]
          Length = 276

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 67/180 (37%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + S+G  +     +KV  +    ++   AG +AD     
Sbjct: 71  LHGTTTLAFKFKNGVIVAADSRASMGSYIGSQTVKKVIEINPY-LLGTMAGGAADCSFWE 129

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 130 RVLAERCRVYELRNKERISVAAASKLLANMVYYYKGMGLSMGTMICGWDKRGPGLYYVDS 189

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D     N + ++GSG +YA     +        EE   +AR+A+  A     Y+  ++ L
Sbjct: 190 DGTRMTNYMFSVGSGSTYAYGILDSGFKHDLEDEEAYDLARRAIFHATHRDAYSGGSVNL 249


>gi|15611531|ref|NP_223182.1| ATP-dependent protease peptidase subunit [Helicobacter pylori J99]
 gi|11133263|sp|Q9ZLW2|HSLV_HELPJ RecName: Full=ATP-dependent protease subunit HslV
 gi|4155004|gb|AAD06045.1| HEAT SHOCK PROTEIN [Helicobacter pylori J99]
          Length = 180

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANAIKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|254779463|ref|YP_003057568.1| ATP-dependent protease peptidase subunit [Helicobacter pylori B38]
 gi|254001374|emb|CAX29359.1| ATP-dependent protease HslV [Helicobacter pylori B38]
          Length = 180

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|109947436|ref|YP_664664.1| ATP-dependent protease peptidase subunit [Helicobacter acinonychis
           str. Sheeba]
 gi|123362637|sp|Q17XG1|HSLV_HELAH RecName: Full=ATP-dependent protease subunit HslV
 gi|109714657|emb|CAJ99665.1| heat shock protein [Helicobacter acinonychis str. Sheeba]
          Length = 180

 Score =  141 bits (355), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEFNNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL        +++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDCFAHLEPKKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|296197832|ref|XP_002746454.1| PREDICTED: proteasome subunit beta type-8-like [Callithrix jacchus]
          Length = 265

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 12/187 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           +++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G 
Sbjct: 62  ERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYIATLRVNKVIEINPY-LLGTMSGC 120

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L K+   Y  +        A    +   +     M L         DK  
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKG 180

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     +       + + GSG +YA     +      S EE   +AR+A++ A     
Sbjct: 181 PGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLARRAIAHATHRDS 240

Query: 175 YTNHNIV 181
           Y+   + 
Sbjct: 241 YSGGVVN 247


>gi|1405321|dbj|BAA10931.1| LMPX of hagfish [Myxine glutinosa]
          Length = 273

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 68/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+    ++ H  TT L  + D  V++A D + + G  V     +KV  +    ++   AG
Sbjct: 59  GESDVKIEFHHGTTTLAFKFDHGVIVAVDSRATAGSYVASQTVKKVIEINPY-LLGTMAG 117

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K    Y  +        A    +   +   + M L         DK 
Sbjct: 118 GAADCMYWERVLSKHCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKR 177

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +      G+ A+GSG +YA     +      + EE   + R+A+  A    
Sbjct: 178 GPGLYYVDEEGTRLSGGMFAVGSGSTYAYGVLDSNHRPDMTPEEAYDLGRRAICHATHRD 237

Query: 174 VYTNHNIVL 182
            Y+   + L
Sbjct: 238 AYSGGVVNL 246


>gi|164658982|ref|XP_001730616.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
 gi|159104512|gb|EDP43402.1| hypothetical protein MGL_2412 [Malassezia globosa CBS 7966]
          Length = 295

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G VV+A D + S G  +   + +KV  +    ++   AG +AD      
Sbjct: 60  HGTTTLAFRYKGGVVVAVDSRASAGSYIASGSVKKVIEINPY-LLGTMAGGAADCQYWET 118

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +  +        A    +   + + + M L         DK+   +     +
Sbjct: 119 YLGIQCRLHELRNKERISVAAASKILSNLVYSYKGMGLSMGTMICGWDKSGPAIYYVDSE 178

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
               +  + ++GSG ++A            S EE   + R+++  A     Y+ + I L
Sbjct: 179 GSRMKGDLFSVGSGSTFAYGVLDQGYHWDLSEEEALDLGRRSIYAATHRDAYSGNTINL 237


>gi|225681120|gb|EEH19404.1| proteasome subunit beta type-5 [Paracoccidioides brasiliensis Pb03]
          Length = 283

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 13/194 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  ANPNCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+ R+++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAATHR 235

Query: 173 CVYTNHNIVLETLK 186
             Y+   I L  +K
Sbjct: 236 DAYSGGFINLYHIK 249


>gi|226292176|gb|EEH47596.1| proteasome component PRE2 [Paracoccidioides brasiliensis Pb18]
          Length = 283

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 13/194 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  ANPNCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+ R+++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAATHR 235

Query: 173 CVYTNHNIVLETLK 186
             Y+   I L  +K
Sbjct: 236 DAYSGGFINLYHIK 249


>gi|317181835|dbj|BAJ59619.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F57]
          Length = 180

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 117/179 (65%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++GMGDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGMGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL +       ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDNFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|1405329|dbj|BAA10935.1| nurse shark LMPX [Ginglymostoma cirratum]
          Length = 259

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  R    V++A D + + G  V     +KV  +    ++   AG +AD     
Sbjct: 53  LHGTTTLGFRFAHGVIVAVDSRATAGSYVASQTVKKVIEINPY-LLGTMAGGAADCSFWE 111

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 112 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 171

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +       + ++GSG  YA            S   A E+A++A+  A     Y+   + L
Sbjct: 172 EGNRVSGQIFSVGSGSVYAYGVLDRAYRHDMSPTEAYELAKQAIYHATYRDAYSGGIVSL 231


>gi|146103656|ref|XP_001469616.1| hs1vu complex proteolytic subunit-like; hs1vu complex proteolytic
           subunit-like,threonine peptidase, Clan T(1), family T1B
           [Leishmania infantum]
 gi|25956176|emb|CAC82584.1| HslVU complex proteolytic subunit [Leishmania infantum]
 gi|134073986|emb|CAM72726.1| hs1vu complex proteolytic subunit-like [Leishmania infantum JPCM5]
 gi|322503769|emb|CBZ38855.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 220

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 91/180 (50%), Positives = 124/180 (68%), Gaps = 2/180 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           AV+   TTIL+VRK   V++ GD QV+LG+ ++  ++    R    N++ GFAGS+ADAF
Sbjct: 17  AVQARHTTILSVRKGNKVILIGDRQVTLGERIVAKSSACKLRKLNDNVVIGFAGSTADAF 76

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            L+E+LE KL  +P QL R++VELAKDWR D+ LR LEA +++  K  TL I G G+V+ 
Sbjct: 77  ALMEKLENKLNDFPEQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVIT 136

Query: 130 PE-NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           PE +G++AIGSGG+YA +AARAL+      AE IARKAM IA DI V++N N  +E L  
Sbjct: 137 PEADGIIAIGSGGTYAKAAARALIDVDGYDAERIARKAMRIATDIDVFSNSNWDVEILTR 196


>gi|295673490|ref|XP_002797291.1| proteasome component PRE2 [Paracoccidioides brasiliensis Pb01]
 gi|226282663|gb|EEH38229.1| proteasome component PRE2 [Paracoccidioides brasiliensis Pb01]
          Length = 283

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 13/194 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  ANPNCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+ R+++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALELGRRSILAATHR 235

Query: 173 CVYTNHNIVLETLK 186
             Y+   I L  +K
Sbjct: 236 DAYSGGFINLYHIK 249


>gi|208434437|ref|YP_002266103.1| heat shock protein [Helicobacter pylori G27]
 gi|217032970|ref|ZP_03438443.1| hypothetical protein HPB128_141g3 [Helicobacter pylori B128]
 gi|298736226|ref|YP_003728752.1| HslV [Helicobacter pylori B8]
 gi|238065879|sp|B5Z6N8|HSLV_HELPG RecName: Full=ATP-dependent protease subunit HslV
 gi|208432366|gb|ACI27237.1| heat shock protein [Helicobacter pylori G27]
 gi|216945299|gb|EEC23974.1| hypothetical protein HPB128_141g3 [Helicobacter pylori B128]
 gi|298355416|emb|CBI66288.1| HslV [Helicobacter pylori B8]
          Length = 180

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++GMGDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGMGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|320155144|ref|YP_004187523.1| ATP-dependent protease HslV [Vibrio vulnificus MO6-24/O]
 gi|319930456|gb|ADV85320.1| ATP-dependent protease HslV [Vibrio vulnificus MO6-24/O]
          Length = 157

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 86/150 (57%), Positives = 116/150 (77%), Gaps = 1/150 (0%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
           MK NARKVRRL    ++AGFAG +ADAFTL ER E KL+ +   L +++VELAKDWR D+
Sbjct: 1   MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
            LR LEA++ +AD+T +L+ITG GDV++PEN ++AIGSGG+YA +AA AL+ +T+  A E
Sbjct: 61  ALRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGAYAQAAATALLENTELDARE 120

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGDE 190
           IA KA++IA DICV+TNHN  +E L++  E
Sbjct: 121 IAEKALNIAGDICVFTNHNHTIEELEIPAE 150


>gi|156363343|ref|XP_001626004.1| predicted protein [Nematostella vectensis]
 gi|156212864|gb|EDO33904.1| predicted protein [Nematostella vectensis]
          Length = 279

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 73  HGTTTLAFKFKHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSFWER 131

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +   + M L         DK    +     D
Sbjct: 132 LLAKQCRIYELRNKERISVAAASKILANMVYYYKGMGLSMGTMICGWDKKGPGLYYVDSD 191

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                N + ++GSG +YA     +      S EE   +  +++  A     Y+   + L
Sbjct: 192 GTRLSNQMFSVGSGSTYAYGVMDSGYKYDMSPEEAYDLGVRSIYHATHRDAYSGGVVNL 250


>gi|289617833|emb|CBI55410.1| unnamed protein product [Sordaria macrospora]
          Length = 291

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 13/190 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +V+A D + + G  +     +KV  +   +++   AG
Sbjct: 58  ANPSCPIKIAHGTTTLAFRFQGGIVVATDSRATAGNWIASQTVKKVIEI-NSDLLGTMAG 116

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   +   + M L           +
Sbjct: 117 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYKGMGLSMGTMCAGVTKE 176

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+ R+++  A   
Sbjct: 177 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTTEEALELGRRSILAATHR 236

Query: 173 CVYTNHNIVL 182
             Y+   I L
Sbjct: 237 DAYSGGFINL 246


>gi|317179118|dbj|BAJ56906.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F30]
          Length = 180

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEIGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E  LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFECILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL S       ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|259500640|ref|ZP_05743542.1| ATP-dependent protease HslVU [Lactobacillus iners DSM 13335]
 gi|302191329|ref|ZP_07267583.1| ATP-dependent protease peptidase subunit [Lactobacillus iners AB-1]
 gi|309805691|ref|ZP_07699731.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LactinV 09V1-c]
 gi|309805937|ref|ZP_07699967.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LactinV 03V1-b]
 gi|309809277|ref|ZP_07703146.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners SPIN 2503V10-D]
 gi|312871403|ref|ZP_07731498.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LEAF 3008A-a]
 gi|312872284|ref|ZP_07732354.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LEAF 2062A-h1]
 gi|312873945|ref|ZP_07733981.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LEAF 2052A-d]
 gi|312875461|ref|ZP_07735464.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LEAF 2053A-b]
 gi|315653525|ref|ZP_07906446.1| ATP-dependent protease HslVU [Lactobacillus iners ATCC 55195]
 gi|325912008|ref|ZP_08174410.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners UPII 143-D]
 gi|325912842|ref|ZP_08175220.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners UPII 60-B]
 gi|329921341|ref|ZP_08277779.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners SPIN 1401G]
 gi|259168024|gb|EEW52519.1| ATP-dependent protease HslVU [Lactobacillus iners DSM 13335]
 gi|308164944|gb|EFO67187.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LactinV 09V1-c]
 gi|308167676|gb|EFO69825.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LactinV 03V1-b]
 gi|308170390|gb|EFO72414.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners SPIN 2503V10-D]
 gi|311088972|gb|EFQ47413.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LEAF 2053A-b]
 gi|311090494|gb|EFQ48902.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LEAF 2052A-d]
 gi|311092107|gb|EFQ50481.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LEAF 2062A-h1]
 gi|311093056|gb|EFQ51405.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LEAF 3008A-a]
 gi|315489216|gb|EFU78857.1| ATP-dependent protease HslVU [Lactobacillus iners ATCC 55195]
 gi|325476193|gb|EGC79357.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners UPII 143-D]
 gi|325477835|gb|EGC80969.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners UPII 60-B]
 gi|328934633|gb|EGG31137.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners SPIN 1401G]
          Length = 174

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 79/173 (45%), Positives = 114/173 (65%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  VR  G + IAGDGQV+LG+  + K+ A+KVRR+    ++ GFAG  ADA +L + 
Sbjct: 2   TTICAVRHKGKIAIAGDGQVTLGEKVIAKSTAKKVRRIYHNQVVVGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L RS+VE+A+ WR D  L  L+AM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLETYSGDLRRSTVEMAQGWRKDPTLAKLQAMMIAFNDKDLLLISGNGEVLEPDEDV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YA +AA A++       A +IA++A+ IAA I V+T+  I  + +
Sbjct: 122 VAIGSGGNYAQAAALAMIRHSSDMDACDIAKEAVLIAAGIDVFTDDKITSDEI 174


>gi|315586804|gb|ADU41185.1| ATP-dependent protease HslVU [Helicobacter pylori 35A]
 gi|332673694|gb|AEE70511.1| ATP-dependent protease HslVU [Helicobacter pylori 83]
          Length = 180

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL S       ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|154297340|ref|XP_001549097.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150858579|gb|EDN33771.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 282

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 56  ANPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 114

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   +   + M L           +
Sbjct: 115 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYRYKGMGLSMGTMCAGVTKE 174

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A  S   S   A E+ R+++  A   
Sbjct: 175 EGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYSYDLSEEAALELGRRSILAATHR 234

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 235 DAYSGGFINLYHVKED 250


>gi|188527648|ref|YP_001910335.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           Shi470]
 gi|238691931|sp|B2UTX3|HSLV_HELPS RecName: Full=ATP-dependent protease subunit HslV
 gi|188143888|gb|ACD48305.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           Shi470]
          Length = 180

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL S       ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|20302762|gb|AAM18885.1|AF391293_2 unknown [Branchiostoma floridae]
          Length = 275

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+ +  ++  H TT L  +    V++A D + + G  +     +KV  +    ++   AG
Sbjct: 60  GEGNVKIEFDHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAG 118

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L ++   Y  +        A    +   + N + M L         DK 
Sbjct: 119 GAADCSFWERVLAEQCRIYELRNKERISVAAASKLLANIVYNYKGMGLSMGTMIVGWDKR 178

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADIC 173
              +     D     N + ++GSG +YA     +  S       A E+ ++A+  A    
Sbjct: 179 GPGLYYVDSDGTRLSNNMFSVGSGSTYAYGVLDSGYSWDMGVEEAYELGKRAIYHATHRD 238

Query: 174 VYTNHNIVL 182
            Y+   + L
Sbjct: 239 AYSGGVVNL 247


>gi|317180291|dbj|BAJ58077.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F32]
          Length = 180

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R         +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E  LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFECILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL S       ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|210134716|ref|YP_002301155.1| ATP-dependent protease peptidase subunit [Helicobacter pylori P12]
 gi|238065876|sp|B6JL97|HSLV_HELP2 RecName: Full=ATP-dependent protease subunit HslV
 gi|210132684|gb|ACJ07675.1| heat shock protein protease subunit [Helicobacter pylori P12]
          Length = 180

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R          I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFAFIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL        +++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPKKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|62972|emb|CAA40494.1| proteasome C1 subunit [Gallus gallus]
          Length = 204

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    VV+A D + + G  +     +KV  +   +++   AG +AD     
Sbjct: 1   LHGTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINP-SLLGTMAGGAADCSFWE 59

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 60  RLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 119

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +         A+GSG SYA                A E+AR+A+  AA    Y+  ++ +
Sbjct: 120 EGTRIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTV 179


>gi|156062346|ref|XP_001597095.1| hypothetical protein SS1G_01289 [Sclerotinia sclerotiorum 1980]
 gi|154696625|gb|EDN96363.1| hypothetical protein SS1G_01289 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 282

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 56  ANPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 114

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   +   + M L           +
Sbjct: 115 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYRYKGMGLSMGTMCAGVTKE 174

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A  S   S   A E+ ++++  A   
Sbjct: 175 EGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYSYDLSEEAALELGKRSILAATHR 234

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 235 DAYSGGFINLYHVKED 250


>gi|308182669|ref|YP_003926796.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           PeCan4]
 gi|308064854|gb|ADO06746.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           PeCan4]
          Length = 180

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 114/179 (63%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R          I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFAFIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNFDHVFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG+YALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|39975367|ref|XP_369074.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145018979|gb|EDK03258.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 284

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 58  ANPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 116

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   +   + M L           +
Sbjct: 117 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYKGMGLSMGTMCAGVTKE 176

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      S   A E+ R+++  A   
Sbjct: 177 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYDLSDEDALELGRRSILAATHR 236

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 237 DAYSGGFINLYHVKED 252


>gi|258574735|ref|XP_002541549.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
 gi|237901815|gb|EEP76216.1| proteasome component PRE2 [Uncinocarpus reesii 1704]
          Length = 283

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 71/196 (36%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  ANPNCPIKLAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L      +  +  R     A    +   + N + M L           +
Sbjct: 116 GAADCQYWLAYLGMLCRLHELRHKRRISVAAASKLLANLVYNYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
               +     D       +  +GSG ++A     A      + EE   + R+++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALSLGRRSILAAMHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+  ++ L  +K  
Sbjct: 236 DAYSGGSVNLYHVKEE 251


>gi|50310861|ref|XP_455453.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644589|emb|CAG98161.1| KLLA0F08228p [Kluyveromyces lactis]
          Length = 285

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + GQ +     +KV  +    ++   AG +AD      
Sbjct: 71  HGTTTLAFRFKGGIIVAVDSRATAGQWIASQTVKKVIEINPF-LLGTMAGGAADCQFWET 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 130 WLGSQCRLHELREKERISVAAASKILSNLVYEYKGAGLSMGTMICGYTKKEGPTIYYVDS 189

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     A      S EE   I ++++  AA    Y+  +I L
Sbjct: 190 DGTRLQGDLFCVGSGQTFAYGVLDANYRWDLSVEEALYIGKRSILAAAHRDAYSGGSINL 249


>gi|309804147|ref|ZP_07698225.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LactinV 11V1-d]
 gi|308163730|gb|EFO65999.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           iners LactinV 11V1-d]
          Length = 174

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 79/173 (45%), Positives = 115/173 (66%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI  VR  G + IAGDGQV+LG+  + K+ A+KVRR+    ++ GFAG  ADA +L + 
Sbjct: 2   TTICAVRHKGKIAIAGDGQVTLGEKVIAKSTAKKVRRIYHNQVVVGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L RS+VE+A+ WR D  L  L+AM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLETYSGDLRRSTVEMAQGWRKDPTLAKLQAMMIAFNDKDLLLISGNGEVLEPDEDV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YA +AA A++       A +IA++A+ IAA I V+T+  I+ + +
Sbjct: 122 VAIGSGGNYAQAAALAMIRHSSDMDACDIAKEAVLIAAGIDVFTDDKIISDEI 174


>gi|295426271|ref|ZP_06818931.1| ATP-dependent protease HslVU [Lactobacillus amylolyticus DSM 11664]
 gi|295064010|gb|EFG54958.1| ATP-dependent protease HslVU [Lactobacillus amylolyticus DSM 11664]
          Length = 174

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 80/173 (46%), Positives = 116/173 (67%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +V+ +G   IAGDGQV+LG+  + KA+A+K+RR+    ++ GFAG  ADA +L E 
Sbjct: 2   TTICSVKFNGKTAIAGDGQVTLGEKVIAKASAKKIRRIFHDRVVIGFAGGVADAVSLQEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ L AM++  D    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMARSWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG+YA +AA A+     + SA +IA +A+ IA+ I V+T+  I  + L
Sbjct: 122 VAIGSGGNYAQAAAIAMTRHAKEMSASDIAHEAVKIASGIDVFTDDQITTDEL 174


>gi|74025044|ref|XP_829088.1| HslVU complex proteolytic subunit [Trypanosoma brucei TREU927]
 gi|70834474|gb|EAN79976.1| hslVU complex proteolytic subunit, putative [Trypanosoma brucei]
 gi|261335037|emb|CBH18031.1| hslVU complex proteolytic subunit, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 209

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 87/183 (47%), Positives = 128/183 (69%), Gaps = 2/183 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           A ++  TTIL+VRK   VV+ GD QV+LG+ ++  ++    R    +++ GFAGS+ADA 
Sbjct: 14  ACQLRHTTILSVRKGDTVVLLGDRQVTLGERIVAKSSACKLRRINDDVVIGFAGSTADAI 73

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           +L+E+LE K+ ++PNQL R++VELAK+WR D+ LR LEA +++     TL I G G+V+ 
Sbjct: 74  SLMEKLENKIGEFPNQLTRAAVELAKEWRTDRALRRLEASLIVCSAEETLEIDGQGNVIT 133

Query: 130 PE-NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           PE +G++AIGSGG++A +AARAL+      AE+IARKAM IA DI V++N +  +E LK 
Sbjct: 134 PEADGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATDIDVFSNEHWDVEVLKR 193

Query: 188 GDE 190
             E
Sbjct: 194 KSE 196


>gi|322829064|gb|EFZ32621.1| hslvu complex proteolytic subunit-like, putative [Trypanosoma
           cruzi]
          Length = 265

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 89/182 (48%), Positives = 128/182 (70%), Gaps = 4/182 (2%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADA 68
           A +   TTIL+VRK   VV+ GD QV+LG+  V K++A K+R++    +I GFAGS+ADA
Sbjct: 70  ACQSRQTTILSVRKGDTVVLIGDRQVTLGERIVAKSSACKLRKINDDIVI-GFAGSTADA 128

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
             L+E+LE K+ ++P QL R++VELAKDWR D+ LR LEA +++  +  TL I G G+V+
Sbjct: 129 IALMEKLENKVGEFPQQLTRAAVELAKDWRTDRALRRLEASLIVCGREETLEIDGQGNVI 188

Query: 129 EPE-NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLK 186
            PE +G++AIGSGG++A +AARAL+      AE+IARKAM IA +I V++N +  +E L 
Sbjct: 189 TPESDGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATEIDVFSNEHWDVEILT 248

Query: 187 VG 188
             
Sbjct: 249 RK 250


>gi|330932201|ref|XP_003303688.1| hypothetical protein PTT_16006 [Pyrenophora teres f. teres 0-1]
 gi|311320144|gb|EFQ88213.1| hypothetical protein PTT_16006 [Pyrenophora teres f. teres 0-1]
          Length = 283

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 70/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------- 115
            +AD    L  L  +   +  +  R     A    +   + + + M L            
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLIYSYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A    +     A E+ R+++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDASYKYELEDDEALELGRRSILAATHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 236 DAYSGGFINLYHVKED 251


>gi|189192022|ref|XP_001932350.1| proteasome subunit beta type-5 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187973956|gb|EDU41455.1| proteasome subunit beta type-5 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 283

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 70/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------- 115
            +AD    L  L  +   +  +  R     A    +   + + + M L            
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A    +     A E+ R+++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDASYKYELEDDEALELGRRSILAATHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 236 DAYSGGFINLYHVKED 251


>gi|262041702|ref|ZP_06014894.1| ATP-dependent protease HslVU [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330004457|ref|ZP_08304951.1| ATP-dependent protease HslVU, peptidase subunit [Klebsiella sp. MS
           92-3]
 gi|259040964|gb|EEW42043.1| ATP-dependent protease HslVU [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328536615|gb|EGF62942.1| ATP-dependent protease HslVU, peptidase subunit [Klebsiella sp. MS
           92-3]
          Length = 149

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 82/145 (56%), Positives = 109/145 (75%), Gaps = 1/145 (0%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
           MK N +KVRRL    +IAGFAG +ADAFTL E  E+KLE +   L++++VELAKDWR D+
Sbjct: 1   MKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDR 60

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
            LR LEA++ +AD+  +L+ITG GDV++PEN ++AIGSGG YA +AARAL+ +T   A +
Sbjct: 61  MLRKLEALLAVADENASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTDMGARD 120

Query: 161 IARKAMSIAADICVYTNHNIVLETL 185
           IA KA+ IA DIC+YTNH   +E L
Sbjct: 121 IAEKALDIAGDICIYTNHFHTIEEL 145


>gi|290992091|ref|XP_002678668.1| predicted protein [Naegleria gruberi]
 gi|284092281|gb|EFC45924.1| predicted protein [Naegleria gruberi]
          Length = 300

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    +  +VIA D + S+G  +   N +KV  +    ++   AG +AD      
Sbjct: 83  KGTTTLGFVFNKGIVIAVDSRASMGNYISSQNVKKVIEINPY-LLGTMAGGAADCQFWER 141

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-------EAMILIADKTITLVITGMGD 126
            L  +   Y  +  R     A    +   +            MI   D T   +     D
Sbjct: 142 YLGMQCRLYELRNKRRISVAAASKLLSNIVYQYKDHGLSMGTMIAGWDHTGPNLFMVDND 201

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLE 183
               +    ++GSG  YA            + E   E+ R+A+  A     Y+   I + 
Sbjct: 202 GTRLKGTRFSVGSGSLYAYGVLDQGYRADLTEEEACELGRRAIYHATHRDAYSGGIINVY 261

Query: 184 TLKVG 188
            ++  
Sbjct: 262 LIRSD 266


>gi|291221879|ref|XP_002730946.1| PREDICTED: proteasome beta 5 subunit-like [Saccoglossus
           kowalevskii]
          Length = 277

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 66/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 70  HGTTTLAFKFQHGVIVAVDSRATAGPFIASQTVKKVIEINPY-LLGTMAGGAADCSFWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L ++   Y  +        A    +   + N + M L         DK    +     D
Sbjct: 129 VLSQQCRIYELRNKERISVAAASKLLANMVYNYKGMGLSMGTMICGWDKRGPGLYYVDSD 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                N + ++GSG +YA     +    + S   A ++ ++A+  A     Y+   + L
Sbjct: 189 GTRITNYMFSVGSGSTYAYGVLDSGYRYELSVQEAYDLGQRAIYHATHRDAYSGGVVNL 247


>gi|227879132|ref|ZP_03997016.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
           JV-V01]
 gi|256843165|ref|ZP_05548653.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
           125-2-CHN]
 gi|256850236|ref|ZP_05555665.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
           MV-1A-US]
 gi|262046372|ref|ZP_06019334.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
           MV-3A-US]
 gi|295692921|ref|YP_003601531.1| ATP-dependent protease hslvu, proteolytic subunit hslv
           [Lactobacillus crispatus ST1]
 gi|227861289|gb|EEJ68924.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
           JV-V01]
 gi|256614585|gb|EEU19786.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
           125-2-CHN]
 gi|256712873|gb|EEU27865.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
           MV-1A-US]
 gi|260573243|gb|EEX29801.1| ATP-dependent protease peptidase subunit [Lactobacillus crispatus
           MV-3A-US]
 gi|295031027|emb|CBL50506.1| ATP-dependent protease HslVU, proteolytic subunit HslV
           [Lactobacillus crispatus ST1]
          Length = 174

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 80/173 (46%), Positives = 115/173 (66%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +VR +G   IAGDGQV+LG+  + KA ARK+RR+    ++ GFAG  ADA +L + 
Sbjct: 2   TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ L AM++  D    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++A +AA A+        A+EIA +A+ IA+ I V+T+  IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDKIVTDEI 174


>gi|299752963|ref|XP_002911819.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
 gi|298410081|gb|EFI28325.1| proteasome component pts1 [Coprinopsis cinerea okayama7#130]
          Length = 313

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 67/179 (37%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G V++A D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 82  HGTTTLAFRFQGGVIVAVDSRATAGSYIASGTVKKVIEINPY-LLGTMAGGAADCQYWET 140

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L      +  +        A    +   + + + M L         DKT   +     D
Sbjct: 141 YLGMHCRLHELRNKERISVSAASKFLSNLVYSYKGMGLSMGTMICGWDKTGPAIFYVDSD 200

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +  + ++GSG ++A            +   A+E+ R+++  A     ++ +++ L
Sbjct: 201 GTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRDAFSGNSVNL 259


>gi|58337281|ref|YP_193866.1| ATP-dependent protease peptidase subunit [Lactobacillus acidophilus
           NCFM]
 gi|58254598|gb|AAV42835.1| ATP-dependent heat shock protease [Lactobacillus acidophilus NCFM]
          Length = 174

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 80/173 (46%), Positives = 117/173 (67%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +VR +G   IAGDGQV+LG+  + KA ARK+RR+    ++ GFAG  ADA +L + 
Sbjct: 2   TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ L AM++  D    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++A +AA A+     +  A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKEMKADEIAHEAVKIASGIDVFTDDHIVTDEI 174


>gi|46125017|ref|XP_387062.1| hypothetical protein FG06886.1 [Gibberella zeae PH-1]
          Length = 283

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPNCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + + + M L           +
Sbjct: 116 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTKE 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A    + S   A E+ ++++  A   
Sbjct: 176 EGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYELSDEEALELGKRSILAATHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 236 DAYSGGYINLYHVKEE 251


>gi|227903867|ref|ZP_04021672.1| ATP-dependent protease peptidase subunit [Lactobacillus acidophilus
           ATCC 4796]
 gi|227868258|gb|EEJ75679.1| ATP-dependent protease peptidase subunit [Lactobacillus acidophilus
           ATCC 4796]
          Length = 174

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 79/173 (45%), Positives = 116/173 (67%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +VR +G   IAGDGQV+LG+  + KA ARK+RR+    ++ GFAG  ADA +L + 
Sbjct: 2   TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR    L+ L AM++  D    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQAWRKYPTLQKLNAMLIAFDDKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++A +AA A+     +  A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKEMKADEIAHEAVKIASGIDVFTDDHIVTDEI 174


>gi|1708783|emb|CAA66312.1| LMP7-like protein [Geodia cydonium]
          Length = 280

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 73  HGTTTLAFKFQHGVIVAVDSRATAGSWIASQTVKKVIEINPY-LLGTMAGGAADCAYWER 131

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
           +L      Y  +        A    +   +   + M L         DK    +     D
Sbjct: 132 QLAFSCRVYELRNKERISVAAASKILSNMVYRYKGMGLSMGTMICGWDKKGPGLYYVDSD 191

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                + + ++GSG +YA     +  S   S   A ++ ++A+  A     Y+   + L
Sbjct: 192 GSRLTHHMFSVGSGSTYAYGVLDSGYSYDLSVEEARDLGKRAIYHATHRDAYSGGVVNL 250


>gi|317177647|dbj|BAJ55436.1| ATP-dependent protease peptidase subunit [Helicobacter pylori F16]
          Length = 180

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 115/179 (64%), Gaps = 6/179 (3%)

Query: 13  MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ATTIL  R          I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADA
Sbjct: 2   FEATTILGYRGEMGGKKFAFIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADA 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           F+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVL
Sbjct: 62  FSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVL 121

Query: 129 E-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           E  +N + AIGSGG++ALSAARAL S       ++  +++ IA D+C+YTN NI +  L
Sbjct: 122 EAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 180


>gi|42519037|ref|NP_964967.1| ATP-dependent protease peptidase subunit [Lactobacillus johnsonii
           NCC 533]
 gi|227889899|ref|ZP_04007704.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           johnsonii ATCC 33200]
 gi|268319570|ref|YP_003293226.1| ATP-dependent protease peptidase subunit HslV [Lactobacillus
           johnsonii FI9785]
 gi|41583324|gb|AAS08933.1| ATP-dependent protease HslV [Lactobacillus johnsonii NCC 533]
 gi|227849343|gb|EEJ59429.1| T01 family HslV component of HslUV peptidase [Lactobacillus
           johnsonii ATCC 33200]
 gi|262397945|emb|CAX66959.1| ATP-dependent protease peptidase subunit HslV [Lactobacillus
           johnsonii FI9785]
 gi|329667429|gb|AEB93377.1| ATP-dependent protease [Lactobacillus johnsonii DPC 6026]
          Length = 174

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 77/173 (44%), Positives = 115/173 (66%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +VR +    IAGDGQV+LG+  + KA A+K+RR+    ++ GFAG  ADA +L + 
Sbjct: 2   TTICSVRYNNKTAIAGDGQVTLGEKVIAKATAKKIRRIYHDQVVIGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L  L+AM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLETYSGDLRRAAVEMAQSWRKDPTLAKLQAMVIAFNDKDLLLISGNGEVLEPDEDV 121

Query: 135 MAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++A +AA A+       SA EIA++A+ IA+ I V+T+ +I  + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHSNGMSASEIAKEAVKIASGIDVFTDDHITTDEI 174


>gi|327289325|ref|XP_003229375.1| PREDICTED: proteasome subunit beta type-5-like [Anolis
           carolinensis]
          Length = 316

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 106 LHGTTTLAFKFQHGVIVAVDSRATAGVYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 164

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 165 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 224

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +       V ++GSG  YA        S   S EE   +AR+A+  A     Y+   + L
Sbjct: 225 EGNRISGTVFSVGSGSVYAYGVMDRGYSHNLSVEEAYDLARRAIYQATYRDAYSGGTVNL 284


>gi|262401962|ref|ZP_06078527.1| ATP-dependent protease HslV [Vibrio sp. RC586]
 gi|262351934|gb|EEZ01065.1| ATP-dependent protease HslV [Vibrio sp. RC586]
          Length = 156

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 83/147 (56%), Positives = 115/147 (78%), Gaps = 1/147 (0%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
           MK NARKVRRL    ++AGFAG +ADAFTL ER E KL+ +   L +++VELAKDWR D+
Sbjct: 1   MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
            LR LEA++ +AD+T++L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T+  A  
Sbjct: 61  ALRRLEAILAVADETVSLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTELDART 120

Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
           IA KA++IA DICV+TNH+  +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHHHTIEELEI 147


>gi|116629574|ref|YP_814746.1| ATP-dependent protease peptidase subunit [Lactobacillus gasseri
           ATCC 33323]
 gi|238853067|ref|ZP_04643459.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           gasseri 202-4]
 gi|282852047|ref|ZP_06261405.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           gasseri 224-1]
 gi|300361601|ref|ZP_07057778.1| ATP-dependent protease HslVU [Lactobacillus gasseri JV-V03]
 gi|311110783|ref|ZP_07712180.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           gasseri MV-22]
 gi|116095156|gb|ABJ60308.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit
           [Lactobacillus gasseri ATCC 33323]
 gi|238834315|gb|EEQ26560.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           gasseri 202-4]
 gi|282556807|gb|EFB62411.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           gasseri 224-1]
 gi|300354220|gb|EFJ70091.1| ATP-dependent protease HslVU [Lactobacillus gasseri JV-V03]
 gi|311065937|gb|EFQ46277.1| ATP-dependent protease HslVU, peptidase subunit [Lactobacillus
           gasseri MV-22]
          Length = 174

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 77/173 (44%), Positives = 115/173 (66%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +VR +    IAGDGQV+LG+  + KA A+K+RR+    ++ GFAG  ADA +L + 
Sbjct: 2   TTICSVRYNNQTAIAGDGQVTLGEKVIAKATAKKIRRIYHDQVVIGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L  L+AM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLETYSGDLRRAAVEMAQSWRKDPTLAKLQAMVIAFNDKDLLLISGNGEVLEPDEDV 121

Query: 135 MAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++A +AA A+       SA EIA++A+ IA+ I V+T+ +I  + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHSSGMSASEIAKEAVKIASGIDVFTDDHITTDEI 174


>gi|312221929|emb|CBY01869.1| similar to proteasome subunit beta type-5 [Leptosphaeria maculans]
          Length = 283

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------- 115
            +AD    L  L  +   +  +  R     A    +   + + + M L            
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A          A E+ R+++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDASYKYDLEDDEALELGRRSILAATHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 236 DAYSGGFINLYHVKED 251


>gi|261199568|ref|XP_002626185.1| proteasome component PRE2 [Ajellomyces dermatitidis SLH14081]
 gi|239594393|gb|EEQ76974.1| proteasome component PRE2 [Ajellomyces dermatitidis SLH14081]
 gi|239615558|gb|EEQ92545.1| proteasome component PRE2 [Ajellomyces dermatitidis ER-3]
 gi|327354709|gb|EGE83566.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
          Length = 283

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 67/190 (35%), Gaps = 13/190 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  ANPDCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------- 115
            +AD    L  L  +   +  +  R     A    +   + N + M L            
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+ R+++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRFDLTDEEALELGRRSILAATHR 235

Query: 173 CVYTNHNIVL 182
             Y+   I L
Sbjct: 236 DAYSGGYINL 245


>gi|260101612|ref|ZP_05751849.1| ATP-dependent protease HslVU [Lactobacillus helveticus DSM 20075]
 gi|260084575|gb|EEW68695.1| ATP-dependent protease HslVU [Lactobacillus helveticus DSM 20075]
          Length = 174

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 80/173 (46%), Positives = 117/173 (67%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +VR +G   IAGDGQV+LG+  + KA ARK+RR+    +I GFAG  ADA +L + 
Sbjct: 2   TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ L AM++  ++   L+I+G G+VLEP+  V
Sbjct: 62  LEGKLEAYNGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNEKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++A +AA A+        A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHANDMQADEIAHEAVKIASGIDVFTDDHIVTDEI 174


>gi|296504325|ref|YP_003666025.1| ATP-dependent protease peptidase [Bacillus thuringiensis BMB171]
 gi|296325377|gb|ADH08305.1| ATP-dependent protease peptidase [Bacillus thuringiensis BMB171]
          Length = 153

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 87/153 (56%), Positives = 117/153 (76%), Gaps = 4/153 (2%)

Query: 37  LGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAK 95
           +G   VMK  ARKVR+L +G ++AGFAGS ADAFTL E  E KLE+Y   L R++VE+AK
Sbjct: 1   MGNAVVMKHTARKVRKLFQGKVLAGFAGSVADAFTLFEMFEGKLEEYNGNLQRAAVEMAK 60

Query: 96  DWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--- 152
            WR DK LR LEAM+++ DKT  L+++G G+V+EP++G++AIGSGG+YALSA RAL    
Sbjct: 61  QWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDGILAIGSGGNYALSAGRALKQYA 120

Query: 153 STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           S   +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 121 SEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 153


>gi|261211241|ref|ZP_05925530.1| ATP-dependent protease HslV [Vibrio sp. RC341]
 gi|260839742|gb|EEX66353.1| ATP-dependent protease HslV [Vibrio sp. RC341]
          Length = 156

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 83/147 (56%), Positives = 114/147 (77%), Gaps = 1/147 (0%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
           MK NARKVRRL    ++AGFAG +ADAFTL ER E KL+ +   L +++VELAKDWR D+
Sbjct: 1   MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
            LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T+  A  
Sbjct: 61  ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTELDART 120

Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
           IA KA++IA DICV+TNH+  +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHHHTIEELEI 147


>gi|262170080|ref|ZP_06037769.1| ATP-dependent protease HslV [Vibrio cholerae RC27]
 gi|262191442|ref|ZP_06049629.1| ATP-dependent protease HslV [Vibrio cholerae CT 5369-93]
 gi|262021488|gb|EEY40200.1| ATP-dependent protease HslV [Vibrio cholerae RC27]
 gi|262032682|gb|EEY51233.1| ATP-dependent protease HslV [Vibrio cholerae CT 5369-93]
          Length = 158

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 83/147 (56%), Positives = 114/147 (77%), Gaps = 1/147 (0%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
           MK NARKVRRL    ++AGFAG +ADAFTL ER E KL+ +   L +++VELAKDWR D+
Sbjct: 1   MKGNARKVRRLYNNKVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
            LR LEA++ +AD+T +L+ITG GDVL+PE+ ++AIGSGG+YA +AA AL+ +T+  A  
Sbjct: 61  ALRRLEAILAVADETASLIITGNGDVLQPEHDLIAIGSGGNYAQAAAIALLENTELDART 120

Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
           IA KA++IA DICV+TNH+  +E L++
Sbjct: 121 IAEKALNIAGDICVFTNHHHTIEELEI 147


>gi|291395993|ref|XP_002714656.1| PREDICTED: proteasome beta 8 subunit [Oryctolagus cuniculus]
          Length = 276

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 68/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           GD++  ++M H TT L  +    VV+A D + S G  +      KV  +    ++   +G
Sbjct: 61  GDRNVQIEMAHGTTTLAFKFQHGVVVAVDSRASAGSYIATIRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
           S+AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 SAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMFQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +       + + GSG +YA     +      S EE   + R+A+  A    
Sbjct: 180 GPGLYYVDENGTRLSGTMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIVHATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|291296103|ref|YP_003507501.1| 20S proteasome A and B subunits [Meiothermus ruber DSM 1279]
 gi|290471062|gb|ADD28481.1| 20S proteasome A and B subunits [Meiothermus ruber DSM 1279]
          Length = 183

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 89/167 (53%), Positives = 125/167 (74%), Gaps = 2/167 (1%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSSADAFT 70
           +MH TTI+ VR+DGV  IAGDGQV+LGQT+MK +A KVRRL +G+ I+ GFAG+ ADA T
Sbjct: 3   RMHGTTIVAVRRDGVTAIAGDGQVTLGQTIMKTSAVKVRRLEQGDGILVGFAGAVADALT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           LLE+ E  L      L R+++E AK WR D+ LR+LEAM+++AD+   L+++G G+VL P
Sbjct: 63  LLEKFEGALSGAKGNLPRAAIETAKLWRTDRVLRSLEAMLVLADRDHLLLLSGNGEVLNP 122

Query: 131 ENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYT 176
           +  V+A+GSGG YAL+AA+AL+  +  SA +IA +A+ IA +I +YT
Sbjct: 123 DEPVIAVGSGGPYALAAAKALLRYSSLSAPQIAEQAIRIAGEIDLYT 169


>gi|112148387|gb|ABI13540.1| ATP-dependent protease Hs IVU peptidase subunit-like protein
           [Lactobacillus helveticus CNRZ32]
 gi|328467377|gb|EGF38455.1| ATP-dependent protease subunit HslV [Lactobacillus helveticus MTCC
           5463]
          Length = 174

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 80/173 (46%), Positives = 116/173 (67%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +VR +G   IAGDGQV+LG+  + KA ARK+RR+    +I GFAG  ADA +L + 
Sbjct: 2   TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ L AM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLEAYNGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNDKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++A +AA A+        A+EIA +A+ IA+ I V+T+ +IV + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHANDMQADEIAHEAVKIASGIDVFTDDHIVTDEI 174


>gi|114326385|ref|NP_001041550.1| proteasome subunit beta type-8 precursor [Canis lupus familiaris]
 gi|62900679|sp|Q5W416|PSB8_CANFA RecName: Full=Proteasome subunit beta type-8; AltName:
           Full=Proteasome subunit beta-5i; Flags: Precursor
 gi|55162804|emb|CAH63452.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional protease 7) [Canis lupus familiaris]
          Length = 276

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + + G  +  +   KV  +   +++   +G +AD      
Sbjct: 71  HGTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINP-SLLGTMSGCAADCQYWER 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 130 LLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDKKGPGLYYVDQN 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVL 182
                  + + GSG +YA     +      S E   E+ R+A++ A     Y+   I +
Sbjct: 190 GTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSGGIINM 248


>gi|315038213|ref|YP_004031781.1| ATP-dependent protease peptidase subunit [Lactobacillus amylovorus
           GRL 1112]
 gi|325956668|ref|YP_004292080.1| ATP-dependent protease subunit HslV [Lactobacillus acidophilus
           30SC]
 gi|312276346|gb|ADQ58986.1| ATP-dependent protease peptidase subunit [Lactobacillus amylovorus
           GRL 1112]
 gi|325333233|gb|ADZ07141.1| ATP-dependent protease subunit HslV [Lactobacillus acidophilus
           30SC]
 gi|327183491|gb|AEA31938.1| ATP-dependent protease subunit HslV [Lactobacillus amylovorus GRL
           1118]
          Length = 174

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 80/173 (46%), Positives = 116/173 (67%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +VR +G   IAGDGQV+LG+  + KA ARK+RR+    ++ GFAG  ADA +L E 
Sbjct: 2   TTICSVRFNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVVIGFAGGVADAVSLQEM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+DWR D  L+ L AM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQDWRKDPALQKLNAMLIAFNDKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++A +AA A+        A+EIA +A+ IA+ I V+T+  I+ + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDQIITDEI 174


>gi|14591201|ref|NP_143277.1| proteasome beta subunit precursor [Pyrococcus horikoshii OT3]
 gi|17380245|sp|O50110|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
           [Pyrococcus horikoshii OT3]
          Length = 207

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 10/186 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K   TT + +     VV+A D + SLG  +   N  K+ ++ +   IAG AG   D   L
Sbjct: 7   KFKGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAG-AGDVGDILNL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRM------DKYLRNLEAMILIADKTITLVITGMG 125
           +  L  + + Y +Q  +     A    +       KY   L   ++        + +   
Sbjct: 66  VRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEKPKLYSVDM 125

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                E+     GSG  +A S   +      + EE   +A KA++ A    V++   I++
Sbjct: 126 VGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILV 185

Query: 183 ETLKVG 188
            T+   
Sbjct: 186 VTITKE 191


>gi|322707035|gb|EFY98614.1| proteasome component PRE2 precursor [Metarhizium anisopliae ARSEF
           23]
          Length = 283

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + + + M L           +
Sbjct: 116 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTKE 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A  +   S   A E+ R+++  A   
Sbjct: 176 EGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYNYDLSVEDALELGRRSILAATHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 236 DAYSGGFINLYHVKEE 251


>gi|154346210|ref|XP_001569042.1| hs1vu complex proteolytic subunit-like [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066384|emb|CAM44175.1| hs1vu complex proteolytic subunit-like,threonine peptidase, Clan
           T(1), family T1B [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 217

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 2/180 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           AV+  +TTIL+VRK   V++ GD QV+LG+ ++  ++    R    N+  GFAGS+ADAF
Sbjct: 17  AVQRRSTTILSVRKGNKVILIGDRQVTLGERIVAKSSACKLRKLNDNVAIGFAGSTADAF 76

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            L+E+LE KL  +P+QL R++VELAKDWR D+ LR LEA +++  K  TL I G G+V+ 
Sbjct: 77  ALMEKLENKLNDFPDQLSRAAVELAKDWRTDRALRRLEASLIVCSKEETLEIDGQGNVIT 136

Query: 130 P-ENGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           P E+G++AIGSGG+YA +AARAL+      AE IA KAM IA DI V++N N  +E L  
Sbjct: 137 PEEDGIIAIGSGGTYAKAAARALIDVDGYDAERIALKAMKIATDIDVFSNSNWDVEMLTR 196


>gi|302915857|ref|XP_003051739.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732678|gb|EEU46026.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 282

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 56  SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 114

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + + + M L           +
Sbjct: 115 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTKE 174

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+ ++++  A   
Sbjct: 175 EGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGKRSILAATHR 234

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 235 DAYSGGFINLYHVKEE 250


>gi|328849031|gb|EGF98220.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
          Length = 296

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    +V+A D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 76  HGTTTLAFRFKHGIVVAVDSRATAGSYIASGTVKKVIEINPF-LLGTMAGGAADCQYWET 134

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +  +        A    +   + + + M L         DK+   +     D
Sbjct: 135 YLGMQCRLHELRNKSRISVAAASKHLSNLVYSYKGMGLSMGTMICGWDKSGPALYYVDSD 194

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
               +    ++GSG ++A                A E+ R+++  A     ++ + + L 
Sbjct: 195 GTRLKGDCFSVGSGSTFAYGVLDQGYHWDLEVEEALELGRRSIYAAGHRDAFSGNTLNLY 254

Query: 184 TLKVG 188
            +K  
Sbjct: 255 HVKED 259


>gi|302414704|ref|XP_003005184.1| proteasome component PRE2 [Verticillium albo-atrum VaMs.102]
 gi|261356253|gb|EEY18681.1| proteasome component PRE2 [Verticillium albo-atrum VaMs.102]
          Length = 286

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 13/190 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 60  SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 118

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + + + M L           +
Sbjct: 119 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTKE 178

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A    + S   A E+ R+++  A   
Sbjct: 179 EGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYKYELSDEEALELGRRSILAATHR 238

Query: 173 CVYTNHNIVL 182
             Y+   I L
Sbjct: 239 DAYSGGFINL 248


>gi|118382535|ref|XP_001024425.1| peptidase, T1 family protein [Tetrahymena thermophila]
 gi|89306192|gb|EAS04180.1| peptidase, T1 family protein [Tetrahymena thermophila SB210]
          Length = 229

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 93/178 (52%), Positives = 122/178 (68%), Gaps = 5/178 (2%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K   TTIL V+K+  + I GDGQVSLG TV+K + RKVR+L  G+ I GFAGS ADAFTL
Sbjct: 28  KWRQTTILAVKKNNEICIVGDGQVSLGSTVVKTDGRKVRKLANGS-ICGFAGSLADAFTL 86

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           +E LE  + + P   L++ +  AK WR  K LR+LEA +L+ DK + + + G G+VLE  
Sbjct: 87  MEGLENIMTKQP--TLKACITYAKQWRTGKALRHLEATLLVVDKDLIVELDGTGNVLEIP 144

Query: 132 NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             V+ IGSGG++A  AARAL+     SA++IA K+M IAAD C+YTNHN V+ETLK  
Sbjct: 145 E-VIGIGSGGAFAECAARALIDIDGMSAKDIALKSMKIAADKCIYTNHNWVVETLKWD 201


>gi|262392522|ref|YP_003284376.1| ATP-dependent protease HslV [Vibrio sp. Ex25]
 gi|262336116|gb|ACY49911.1| ATP-dependent protease HslV [Vibrio sp. Ex25]
          Length = 156

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 83/147 (56%), Positives = 112/147 (76%), Gaps = 1/147 (0%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK 101
           MK NARKVRRL    ++AGFAG +ADAFTL ER E KL+ +   L +++VELAKDWR D+
Sbjct: 1   MKGNARKVRRLYNNQVLAGFAGGTADAFTLFERFESKLQMHQGHLTKAAVELAKDWRSDR 60

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE 160
            LR LEA++ +AD+T +L+ITG GDV++PE+ ++AIGSGG+YA +AA AL+ +T   A E
Sbjct: 61  ALRKLEALLAVADETASLIITGNGDVVQPEHDLIAIGSGGAYAQAAATALLENTDLDARE 120

Query: 161 IARKAMSIAADICVYTNHNIVLETLKV 187
           IA KA++IA DICV+TNH+  +E L  
Sbjct: 121 IAEKALNIAGDICVFTNHHHTVEELDS 147


>gi|161611764|gb|AAI55951.1| LOC100127332 protein [Xenopus laevis]
          Length = 253

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 47  LHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 105

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 106 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 165

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +       V ++GSG  YA     +  + +     A+E+AR+++  A     Y+   + L
Sbjct: 166 EGNRVSGSVFSVGSGSMYAYGVLDSGYNYELEVEEAQELARRSIYQATYRDAYSGGVVNL 225


>gi|47228090|emb|CAF97719.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 268

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 66  LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 124

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 125 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDS 184

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +       + A+GSG  YA     + +    S   A E+ R+A+  A     Y+   + L
Sbjct: 185 EGNRVCGDLFAVGSGSMYAYGVMDSGLRHDLSVEEACELGRRAIYQATYRDAYSGGQVNL 244


>gi|207340308|gb|EDZ68701.1| YPR103Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 287

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD      
Sbjct: 74  HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWET 132

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 133 WLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S E+   + ++++  AA    Y+  ++ L
Sbjct: 193 DGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 252


>gi|171687907|ref|XP_001908894.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943915|emb|CAP69567.1| unnamed protein product [Podospora anserina S mat+]
          Length = 288

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 13/190 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + H  +K+ H TT L  R  G +++A D + + G  +     +KV  +   +++   AG
Sbjct: 59  SNPHCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSDLLGTMAG 117

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   +   +   L           +
Sbjct: 118 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYKGKGLSMGTMCAGVTKE 177

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+  +++  A   
Sbjct: 178 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTVEEALELGSRSILAATHR 237

Query: 173 CVYTNHNIVL 182
             Y+   I L
Sbjct: 238 DAYSGGFINL 247


>gi|320581894|gb|EFW96113.1| Beta 5 subunit of the 20S proteasome [Pichia angusta DL-1]
          Length = 284

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 68/190 (35%), Gaps = 13/190 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +KM H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 61  SNPDCKIKMAHGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVKKVIEINP-MLLGTMAG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
           ++ D       L  +   +  +        A    +   + + + M L           K
Sbjct: 120 TACDCQYWETWLGTQCRLHELRNKERISVCAASKILCNLVYSYKGMGLGMGTMICGYTPK 179

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
               +     D    +  +  +GSG ++A            S E+   + ++A+  AA  
Sbjct: 180 EGPTIYYVDSDGTRLKGDLFCVGSGQTFAYGVLDTNYKWDLSVEDALYLGKRAILAAAHR 239

Query: 173 CVYTNHNIVL 182
             Y+  +I L
Sbjct: 240 DAYSGGSINL 249


>gi|172260|gb|AAA34906.1| proteosome-related protein [Saccharomyces cerevisiae]
          Length = 288

 Score =  137 bits (345), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD      
Sbjct: 74  HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWET 132

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 133 WLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S E+   + ++++  AA    Y+  ++ L
Sbjct: 193 DGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 252


>gi|323302586|gb|EGA56393.1| Pre2p [Saccharomyces cerevisiae FostersB]
          Length = 287

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD      
Sbjct: 74  HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWET 132

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 133 WLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S E+   + ++++  AA    Y+  ++ L
Sbjct: 193 DGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 252


>gi|6325360|ref|NP_015428.1| Pre2p [Saccharomyces cerevisiae S288c]
 gi|730375|sp|P30656|PSB5_YEAST RecName: Full=Proteasome component PRE2; AltName: Full=Macropain
           subunit PRE2; AltName: Full=Multicatalytic endopeptidase
           complex subunit PRE2; AltName: Full=Proteinase YSCE
           subunit PRE2; Flags: Precursor
 gi|323462946|pdb|3NZJ|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462960|pdb|3NZJ|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462974|pdb|3NZW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462988|pdb|3NZW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323463002|pdb|3NZX|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463016|pdb|3NZX|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|4221|emb|CAA48628.1| proteasome Pre2 subunit [Saccharomyces cerevisiae]
 gi|914974|gb|AAB68073.1| Pre2p: Proteasome subunit [Saccharomyces cerevisiae]
 gi|1041975|gb|AAB34630.1| Doa3, PRG1, PRE2=beta-type proteasome subunit LMP7 homolog/Hs-X
           homolog [Saccharomyces cerevisiae, Peptide, 287 aa]
 gi|151942879|gb|EDN61225.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
 gi|190408030|gb|EDV11295.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256269062|gb|EEU04399.1| Pre2p [Saccharomyces cerevisiae JAY291]
 gi|285815625|tpg|DAA11517.1| TPA: Pre2p [Saccharomyces cerevisiae S288c]
 gi|323331341|gb|EGA72759.1| Pre2p [Saccharomyces cerevisiae AWRI796]
 gi|323335173|gb|EGA76463.1| Pre2p [Saccharomyces cerevisiae Vin13]
 gi|323350231|gb|EGA84378.1| Pre2p [Saccharomyces cerevisiae VL3]
 gi|742352|prf||2009376C proteasome:SUBUNIT=Pre2
          Length = 287

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD      
Sbjct: 74  HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWET 132

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 133 WLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S E+   + ++++  AA    Y+  ++ L
Sbjct: 193 DGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 252


>gi|227893508|ref|ZP_04011313.1| ATP-dependent protease peptidase subunit [Lactobacillus ultunensis
           DSM 16047]
 gi|227864678|gb|EEJ72099.1| ATP-dependent protease peptidase subunit [Lactobacillus ultunensis
           DSM 16047]
          Length = 174

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 79/173 (45%), Positives = 115/173 (66%), Gaps = 3/173 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI +VR +G   IAGDGQV+LG+  + KA ARK+RR+    +I GFAG  ADA +L + 
Sbjct: 2   TTICSVRYNGKTAIAGDGQVTLGEKVIAKATARKIRRIYHDRVIIGFAGGVADAVSLQDM 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           LE KLE Y   L R++VE+A+ WR D  L+ L AM++  +    L+I+G G+VLEP+  V
Sbjct: 62  LEGKLESYSGDLRRAAVEMAQAWRKDPTLQKLNAMLIAFNDKDLLLISGNGEVLEPDENV 121

Query: 135 MAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           +AIGSGG++A +AA A+        A+EIA +A+ IA+ I V+T+  I+ + +
Sbjct: 122 VAIGSGGNFAQAAAIAMTRHAKDMKADEIAHEAVKIASGIDVFTDDQIITDEI 174


>gi|156602028|gb|ABU86903.1| Psmb8 [Ornithorhynchus anatinus]
          Length = 270

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 3   VMGDKHYAVK---MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
           ++G++   V+      TT L       VV+A D + + G  +      KV  +    ++ 
Sbjct: 51  LVGNRDDRVQIKLFKGTTTLAFNFQHGVVVAVDSRATAGNYICSQMVNKVIEINP-QLLG 109

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------ 113
             +GS+AD       L K+   Y  +        A    +   +     M L        
Sbjct: 110 TMSGSAADCQYWERLLAKECRLYHLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICG 169

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
            DK    +     D +     + + GSG +YA     +      S EE   + R+A+  A
Sbjct: 170 WDKKGPGLYYVDEDGVRLSGLMFSTGSGRNYAYGVMDSGYRYDLSPEEAYDLGRRAIVHA 229

Query: 170 ADICVYTNHNIVL 182
                Y+   + +
Sbjct: 230 THRDGYSGGMVNM 242


>gi|18124203|gb|AAL59862.1|AF363583_1 proteasome beta-subunit LMP7 [Heterodontus francisci]
          Length = 276

 Score =  137 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  + +  V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFEHGVIVAVDSRASAGNFLASGDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         DK    +     +
Sbjct: 126 LLAKQCRLYKLRNKQRITVSAASKLLCNMMCEYRGMGLSMGSMICGWDKKGPGLYYVDDN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                  + + G G +YA     +      + EE   + R+A+  A     YT   I +
Sbjct: 186 GTRLSGNMFSTGCGNAYAYGVVDSGYRYDLTVEEAYDLGRRAIYHATHRDAYTGGFINM 244


>gi|259150253|emb|CAY87056.1| Pre2p [Saccharomyces cerevisiae EC1118]
          Length = 287

 Score =  137 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD      
Sbjct: 74  HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWET 132

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 133 WLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S E+   + ++++  AA    Y+  ++ L
Sbjct: 193 DGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 252


>gi|85111469|ref|XP_963951.1| proteasome component PRE2 precursor [Neurospora crassa OR74A]
 gi|28925704|gb|EAA34715.1| proteasome component PRE2 precursor [Neurospora crassa OR74A]
          Length = 291

 Score =  137 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 13/190 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +   +++   AG
Sbjct: 58  ANPSCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSDLLGTMAG 116

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   +   + M L           +
Sbjct: 117 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYKGMGLSMGTMCAGVTKE 176

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+  +++  A   
Sbjct: 177 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTVEEALELGSRSILAATHR 236

Query: 173 CVYTNHNIVL 182
             Y+   I L
Sbjct: 237 DAYSGGFINL 246


>gi|258614012|ref|NP_542945.2| proteasome subunit beta type-8 [Rattus norvegicus]
 gi|84028246|sp|P28064|PSB8_RAT RecName: Full=Proteasome subunit beta type-8; AltName:
           Full=Macropain subunit C13; AltName: Full=Multicatalytic
           endopeptidase complex subunit C13; AltName:
           Full=Proteasome component C13; AltName: Full=Proteasome
           subunit beta-5i; Flags: Precursor
 gi|46237562|emb|CAE83942.1| proteasome (prosome, macropain) subunit, beta type, 8 [Rattus
           norvegicus]
 gi|149043357|gb|EDL96808.1| proteosome (prosome, macropain) subunit, beta type 8, isoform CRA_a
           [Rattus norvegicus]
          Length = 276

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +      KV  +    ++   +G +AD      
Sbjct: 71  HGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPY-LLGTMSGCAADCQYWER 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 130 LLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDN 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      S EE   +AR+A+  A     Y+   + + 
Sbjct: 190 GTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMY 249

Query: 184 TLKVG 188
            +K  
Sbjct: 250 HMKKD 254


>gi|212223310|ref|YP_002306546.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
 gi|302595732|sp|B6YSW2|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
          Length = 203

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 10/186 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+  TT + +     VV+A D + SLG  V+     KV ++     +AG AGS  D  +L
Sbjct: 4   KLKGTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAG-AGSVGDILSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK------YLRNLEAMILIADKTITLVITGMG 125
           +  L  +++ Y  ++ R     A             ++      ++        + +   
Sbjct: 63  VRLLRAEVKLYRAKVGREISVKALATLTSNILHGSRFMPYFGWFLIAGYDEKPALYSLDM 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                E+   A GSG   A +          + EE   +A KA+ IA    V+T   I L
Sbjct: 123 AGGVTEDKFTAAGSGMELAFAVLEDGYKDDINVEEGVKLALKAIKIATRRDVFTGDGITL 182

Query: 183 ETLKVG 188
            T+   
Sbjct: 183 VTVTEE 188


>gi|1405327|dbj|BAA10934.1| LMP7 [Ginglymostoma cirratum]
          Length = 278

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 69  HGTTTLAFKFQHGVIVAVDSRASAGNYLASVDANKVIEINPY-LLGTMSGSAADCQYWER 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         DK    +     +
Sbjct: 128 LLAKQCRLYKLRNKQRISVSAASKLLSNMMCEYRGMGLSMGSMICGWDKKGPGLYYVDDN 187

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      + EE   + R+A+  A     YT   + +
Sbjct: 188 GTRLSGNMFSTGCGNVYAYGVVDSGYRYDLTVEEAYDLGRRAIYHATHRDAYTGGFVNM 246


>gi|255080038|ref|XP_002503599.1| predicted protein [Micromonas sp. RCC299]
 gi|226518866|gb|ACO64857.1| predicted protein [Micromonas sp. RCC299]
          Length = 180

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 92/161 (57%), Positives = 116/161 (72%), Gaps = 2/161 (1%)

Query: 31  GDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSS 90
            DGQV+LG  V+K N +KVRRL  G +      ++ DAFTL ERLE KLE++P QL R++
Sbjct: 2   ADGQVTLGSQVIKPNVKKVRRLQGGVVGGFAGATA-DAFTLFERLEMKLEEHPGQLTRAA 60

Query: 91  VELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
           VELAK WR DKYLR LEA +++ADK  T  ITG GDV+EP +GV+ IGSGG YA +AARA
Sbjct: 61  VELAKAWRNDKYLRRLEATMVVADKHHTFQITGGGDVIEPHDGVIGIGSGGPYATAAARA 120

Query: 151 LMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           L+      A  IA+KAM+IAAD CVYTNHN ++E++   DE
Sbjct: 121 LVDIDGMDAMAIAKKAMNIAADTCVYTNHNFIIESIGPNDE 161


>gi|148229628|ref|NP_001080028.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
 gi|37589390|gb|AAH59335.1| MGC69086 protein [Xenopus laevis]
          Length = 271

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT L  +    V++A D + S G  +    A KV  +    ++   +GS+AD     
Sbjct: 64  WHGTTTLAFKFKHGVIVAVDSRASAGSYIASLKANKVIEINPY-LLGTMSGSAADCQHWE 122

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMG 125
             L K+   Y  +        +    +   +            MI   DK    +     
Sbjct: 123 RLLAKECRLYQLRNNSRISVSSASKLLCNMMLQYRGSGLSVGSMICGWDKKGPGLYYVDD 182

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +       + + GSG SYA     +      + EE   + R+A+S A     Y+   + +
Sbjct: 183 NGTRLCGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYDLGRRAISYATHRDNYSGGVVNM 242


>gi|315039657|ref|XP_003169204.1| proteasome component PRE2 [Arthroderma gypseum CBS 118893]
 gi|311337625|gb|EFQ96827.1| proteasome component PRE2 [Arthroderma gypseum CBS 118893]
          Length = 283

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 56  ANPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 114

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 115 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPE 174

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
               +     D       +  +GSG ++A     A      + EE   +  +++  A   
Sbjct: 175 EGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALALGSRSILAATHR 234

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 235 DAYSGGFINLYHVKED 250


>gi|302503731|ref|XP_003013825.1| proteasome component Pre3, putative [Arthroderma benhamiae CBS
           112371]
 gi|291177391|gb|EFE33185.1| proteasome component Pre3, putative [Arthroderma benhamiae CBS
           112371]
 gi|326474427|gb|EGD98436.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
 gi|326481493|gb|EGE05503.1| proteasome component PRE2 [Trichophyton equinum CBS 127.97]
          Length = 283

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 56  ANPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 114

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 115 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPE 174

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
               +     D       +  +GSG ++A     A      + EE   +  +++  A   
Sbjct: 175 EGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALALGSRSILAATHR 234

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 235 DAYSGGFINLYHVKED 250


>gi|323346321|gb|EGA80611.1| Pre2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 287

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD      
Sbjct: 74  HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWET 132

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 133 WLGSQCRLHELREKERISVAAASKILXNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S E+   + ++++  AA    Y+  ++ L
Sbjct: 193 DGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 252


>gi|187608893|sp|P28075|PSB5_RAT RecName: Full=Proteasome subunit beta type-5; AltName:
           Full=Macropain epsilon chain; AltName:
           Full=Multicatalytic endopeptidase complex epsilon chain;
           AltName: Full=Proteasome chain 6; AltName:
           Full=Proteasome epsilon chain; AltName: Full=Proteasome
           subunit X; Flags: Precursor
          Length = 263

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|158518464|ref|NP_001103512.1| proteasome beta 8 subunit [Xenopus (Silurana) tropicalis]
 gi|157423123|gb|AAI53714.1| psmb8 protein [Xenopus (Silurana) tropicalis]
          Length = 271

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT L  +    V++A D + S G  +      KV  +    ++   +GS+AD     
Sbjct: 64  WHGTTTLAFKFQHGVIVAVDSRASAGSYISNVKFNKVIEINPY-LLGTMSGSAADCQYWE 122

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMG 125
             L K+   Y  +        A    M   +            MI   DK    +     
Sbjct: 123 RVLAKECRLYQLRNNSRISVSAASKLMCNMMLQYRGTGLSVGSMICGWDKKGPGLYYVDD 182

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +       + + GSG SYA     +      + EE   + R+A+S A     Y+   + L
Sbjct: 183 NGTRLCGDIFSTGSGNSYAYGVMDSGYRYDLTPEEAYDLGRRAISYATHRDAYSGGFVNL 242


>gi|296803825|ref|XP_002842765.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
 gi|238846115|gb|EEQ35777.1| proteasome component PRE2 [Arthroderma otae CBS 113480]
          Length = 283

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 56  SNPDCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 114

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 115 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPE 174

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
               +     D       +  +GSG ++A     A      + EE   +  +++  A   
Sbjct: 175 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALALGSRSILAATHR 234

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 235 DAYSGGFINLYHVKEE 250


>gi|302692828|ref|XP_003036093.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
 gi|300109789|gb|EFJ01191.1| hypothetical protein SCHCODRAFT_81440 [Schizophyllum commune H4-8]
          Length = 310

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 12/185 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            D +  +K+ H TT L  R  G V++A D + + G  V     +KV  +    ++   AG
Sbjct: 72  ADPNCRIKIQHGTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIEINPY-LLGTMAG 130

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L      +  +        A    +   + + + M L         DKT
Sbjct: 131 GAADCQYWETYLGMHCRLHELRNRERISVSAASKYLSNLVYSYKGMGLSMGTMICGWDKT 190

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +     D    +  + ++GSG ++A            +   A+E+ R+++  A    
Sbjct: 191 GPQIFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRD 250

Query: 174 VYTNH 178
            ++ +
Sbjct: 251 AFSGN 255


>gi|327302090|ref|XP_003235737.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
 gi|326461079|gb|EGD86532.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
          Length = 283

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 56  ANPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 114

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 115 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPE 174

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
               +     D       +  +GSG ++A     A      + EE   +  +++  A   
Sbjct: 175 EGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALALGSRSILAATHR 234

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 235 DAYSGGFINLYHVKED 250


>gi|302307794|ref|NP_984534.2| AEL326Cp [Ashbya gossypii ATCC 10895]
 gi|299789172|gb|AAS52358.2| AEL326Cp [Ashbya gossypii ATCC 10895]
          Length = 285

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +V+A D + + GQ +     +KV  +    ++   AG +AD      
Sbjct: 72  HGTTTLAFRFQGGIVVAVDSRATAGQWIASQTVKKVIEINPF-LLGTMAGGAADCQYWET 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 131 WLGAQCRLHELKEKERISVAAASKILSNLVYEYKGAGLSMGTMICGYTKKEGPTIYYVDS 190

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A            S E+   + ++++  AA    Y+  ++ L
Sbjct: 191 DGTRLKGDLFCVGSGQTFAYGVLDTNYRWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 250


>gi|83035093|ref|NP_001032701.1| proteasome subunit beta type-5 precursor [Bos taurus]
 gi|122138604|sp|Q32KL2|PSB5_BOVIN RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
 gi|81673887|gb|AAI10040.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Bos taurus]
 gi|296483649|gb|DAA25764.1| proteasome subunit beta type-5 precursor [Bos taurus]
          Length = 263

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S     EE   +AR+A+  A     Y+  ++ L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSL 235


>gi|301757125|ref|XP_002914391.1| PREDICTED: proteasome subunit beta type-8-like [Ailuropoda
           melanoleuca]
 gi|281338481|gb|EFB14065.1| hypothetical protein PANDA_002294 [Ailuropoda melanoleuca]
          Length = 276

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G++   ++M H TT L  +    V++A D + + G  +  +   KV  +    ++   +G
Sbjct: 61  GERDVRIEMNHGTTTLAFKFQQGVIVAVDSRATAGSYISTSRINKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVFQYRGMDLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADIC 173
              +     D       + + GSG +YA     +      S E   E+ R+A+  A    
Sbjct: 180 GPGLYYVDADGTRLSGDMFSTGSGNTYAYGVMDSGYRPDLSPEEAYELGRRAIVYATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|194207138|ref|XP_001494538.2| PREDICTED: similar to proteasome beta 5 subunit [Equus caballus]
          Length = 263

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|119193488|ref|XP_001247350.1| proteasome component [Coccidioides immitis RS]
 gi|303312031|ref|XP_003066027.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105689|gb|EER23882.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320040001|gb|EFW21935.1| proteasome component [Coccidioides posadasii str. Silveira]
          Length = 283

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 68/196 (34%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  ANPECPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------- 115
            +AD    L  L      +  +  R     A    +   + N + M L            
Sbjct: 116 GAADCQYWLAYLGMLCRLHELRHKRRISVAAASKLLANLVYNYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
               +     D       +  +GSG ++A     A      + EE   + R+++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALNLGRRSILAAMHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   + L  +K  
Sbjct: 236 DAYSGGFVNLYHVKED 251


>gi|308321636|gb|ADO27969.1| proteasome subunit beta type-5 [Ictalurus furcatus]
          Length = 266

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 60  LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 118

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 119 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDS 178

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +       + A+GSG  YA     +   T  + EE   + R+A+  A     Y+   + L
Sbjct: 179 EGNRVCGDMFAVGSGSMYAYGVLDSGHRTDLTIEEACDLGRRAIYQATFRDAYSGGQVNL 238


>gi|196259781|ref|NP_001124502.1| proteasome subunit beta type-8 [Ovis aries]
 gi|193245504|gb|ACF16970.1| HA2B [Ovis aries]
          Length = 276

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+ +  ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 61  GESNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +       + + GSG S+A     +      S EE   + R+A+  A    
Sbjct: 180 GPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGFVNM 248


>gi|256085670|ref|XP_002579037.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
 gi|238664440|emb|CAZ35276.1| proteasome catalytic subunit 3 (T01 family) [Schistosoma mansoni]
          Length = 518

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT L ++  G V++A D + + G  +     +K+  + K  ++   AG +AD     
Sbjct: 60  FHGTTTLALKYSGGVIVATDSRATAGPYIASGTTKKIIEINKY-LLGTMAGGAADCQFWE 118

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             L K    +  +        A    +   + N + M L         DK  + +     
Sbjct: 119 RVLAKHCRLFELRNKERISVAAASKLLANIVYNYKGMGLSIGTTIVGWDKNGSGIYYVDT 178

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIV 181
           D       + ++GSG  YA          + S   A E+AR+++  A      +   + 
Sbjct: 179 DGNRTPGNLFSVGSGSPYAYGVLDTGYKYEMSDEDAYELARRSIFHATHRDAASGGFVN 237


>gi|255725326|ref|XP_002547592.1| proteasome component PRE2 precursor [Candida tropicalis MYA-3404]
 gi|240135483|gb|EER35037.1| proteasome component PRE2 precursor [Candida tropicalis MYA-3404]
          Length = 284

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  +      KV R+    ++   AG +AD      
Sbjct: 71  HGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIRINPF-LLGTMAGGAADCQYWET 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   + M L           K    +     
Sbjct: 130 WLGTQCRLHELREKERISVAAASKILSNLVYQYKGMGLSMGTMVCGHTAKEGPTIYYVDS 189

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  V  +GSG ++A            + EE   + ++++  A     Y+  +I L
Sbjct: 190 DGTRLKGDVFCVGSGQTFAYGVLDTEYKWDLTVEEALYLGKRSILAATHRDAYSGGSINL 249


>gi|225557527|gb|EEH05813.1| proteasome component PRE2 [Ajellomyces capsulatus G186AR]
          Length = 283

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+  +++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGSRSILAATHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 236 DAYSGGYINLYHVKEE 251


>gi|154274908|ref|XP_001538305.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
 gi|150414745|gb|EDN10107.1| proteasome component PRE2 precursor [Ajellomyces capsulatus NAm1]
          Length = 283

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+  +++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGSRSILAATHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 236 DAYSGGYINLYHVKEE 251


>gi|296214536|ref|XP_002753673.1| PREDICTED: proteasome subunit beta type-5-like [Callithrix jacchus]
          Length = 268

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 62  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 120

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 121 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 180

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S     EE   +AR+A+  A     Y+   + L
Sbjct: 181 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGAVNL 240


>gi|207092708|ref|ZP_03240495.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 169

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 76/167 (45%), Positives = 110/167 (65%), Gaps = 2/167 (1%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +      +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADAF+L +  E+ LE
Sbjct: 3   MEGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADAFSLFDMFERILE 62

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE-PENGVMAIGS 139
                L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVLE  +N + AIGS
Sbjct: 63  SKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVLEAEDNKIAAIGS 122

Query: 140 GGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           GG+YALSAARAL         ++  +++ IA D+C+YTN NI +  L
Sbjct: 123 GGNYALSAARALDHFAHLEPRKLVEESLKIAGDLCIYTNTNIKILEL 169


>gi|71416273|ref|XP_810173.1| hslvu complex proteolytic subunit-like [Trypanosoma cruzi strain CL
           Brener]
 gi|71664447|ref|XP_819204.1| hslvu complex proteolytic subunit-like [Trypanosoma cruzi strain CL
           Brener]
 gi|70874668|gb|EAN88322.1| hslvu complex proteolytic subunit-like, putative [Trypanosoma
           cruzi]
 gi|70884495|gb|EAN97353.1| hslvu complex proteolytic subunit-like, putative [Trypanosoma
           cruzi]
          Length = 209

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 85/181 (46%), Positives = 124/181 (68%), Gaps = 2/181 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           A +   TTIL+VRK   VV+ GD QV+LG+ ++  ++    R    +I+ GFAGS+ADA 
Sbjct: 14  ACQSRQTTILSVRKGDTVVLIGDRQVTLGERIVAKSSACKLRKINDDIVIGFAGSTADAI 73

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            L+E+LE K+ ++P QL R++VELAKDWR D+ LR LEA +++  +  TL I G G+V+ 
Sbjct: 74  ALMEKLENKVGEFPQQLTRAAVELAKDWRTDRALRRLEASLIVCGREETLEIDGQGNVIT 133

Query: 130 PE-NGVMAIGSGGSYALSAARALMSTQ-NSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
           PE +G++AIGSGG++A +AARAL+      AE+IARKAM IA +I V++N +  +E L  
Sbjct: 134 PESDGIVAIGSGGTFAKAAARALIDVDGYDAEKIARKAMRIATEIDVFSNEHWDVEILTR 193

Query: 188 G 188
            
Sbjct: 194 K 194


>gi|307182515|gb|EFN69722.1| Proteasome subunit beta type-5 [Camponotus floridanus]
          Length = 286

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 12/187 (6%)

Query: 7   KHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           KH  +K  H TT L  R  G +V+A D + + GQ +  +  +K+  +    ++   AG +
Sbjct: 65  KHLKIKFDHGTTTLGFRYQGGIVLAVDSRATGGQFIGSSTMKKIVEINDY-LLGTLAGGA 123

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD       L ++   Y  +        A    +   + N + M L         DK   
Sbjct: 124 ADCVYWDRVLARQCRMYELRNRERISIAAASKLLSNMIYNFKGMGLSIGMMLAGWDKRGP 183

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +     +       V ++GSG  +A     +      +   A E+ R+++  A     Y
Sbjct: 184 GLYYVDSEGTRTPGKVFSVGSGSVFAFGVLDSGYRWDLTDEQAYELGRRSIYHATHRDAY 243

Query: 176 TNHNIVL 182
           +   I +
Sbjct: 244 SGGIIRV 250


>gi|240278169|gb|EER41676.1| proteasome component PRE2 [Ajellomyces capsulatus H143]
 gi|325096234|gb|EGC49544.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 283

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + N + M L           +
Sbjct: 116 GAADCQYWLAYLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPQ 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A E+  +++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDLTDEEALELGSRSILAATHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 236 DAYSGGYINLYHVKEE 251


>gi|147899854|ref|NP_001084323.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Xenopus laevis]
 gi|971307|dbj|BAA07945.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
 gi|38014491|gb|AAH60388.1| PSMB8 protein [Xenopus laevis]
          Length = 271

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT L  +    V++A D + S G  +      KV  +    ++   +GS+AD     
Sbjct: 64  WHGTTTLAFKFQHGVIVAVDSRASAGSYISTIKFNKVIEINPY-LLGTMSGSAADCQYWE 122

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMG 125
             L K+   Y  +        A    M   +            MI   DK    +     
Sbjct: 123 RLLAKECRLYQLRNNSRISVSAASKLMCNMMLQYRGTGLSVGSMICGWDKKGPGLYYVDD 182

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +       + + GSG SYA     +      + EE   + R+A+S A     Y+   + L
Sbjct: 183 NGTRLCGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYDLGRRAISYATHRDAYSGGCVNL 242


>gi|167521858|ref|XP_001745267.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776225|gb|EDQ89845.1| predicted protein [Monosiga brevicollis MX1]
          Length = 247

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V+IA D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 38  HGTTTLGFKYQGGVIIAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSYWER 96

Query: 74  RLEKKLEQYPNQLLRSSVELAKD-------WRMDKYLRNLEAMILIADKTITLVITGMGD 126
            L  +   Y  +        A         W       ++  M+   DK    +     D
Sbjct: 97  YLAMQCRLYELRNGERISVAAASKVLANIVWNYRNMGLSMGTMVCGWDKKGPGLFYVDSD 156

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                N + ++GSG +YA     A      S   A+++ R+A+  A     Y+   + L
Sbjct: 157 GTRLTNNMFSVGSGSTYAYGVLDAGYKWDLSDEEAQDLGRRAIYHATFRDAYSGGTVNL 215


>gi|254172363|ref|ZP_04879038.1| proteasome subunit beta [Thermococcus sp. AM4]
 gi|214033292|gb|EEB74119.1| proteasome subunit beta [Thermococcus sp. AM4]
          Length = 201

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 69/189 (36%), Gaps = 10/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
               M  TT + V     VV+A D + +LG  V      KV ++     IAG AG   D 
Sbjct: 4   SPSAMKGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQVDDHLAIAG-AGLVGDI 62

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKD------WRMDKYLRNLEAMILIADKTITLVIT 122
            +L+  L  + + Y  ++ R     A            +YL      ++        + +
Sbjct: 63  LSLVRLLRAEAKLYRARVGREMSVKAMATLVSNVLHGSRYLPYFAWFLIGGYDVRPRLYS 122

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                   E   +A GSG  +AL+      S     EE   +A +A+  A    VYT   
Sbjct: 123 IDAAGGVTEERFIAAGSGMEFALALLEENFSDGMDLEEGVDLAVRAVKAAMRRDVYTGEG 182

Query: 180 IVLETLKVG 188
           + + T+   
Sbjct: 183 VTVVTITKE 191


>gi|157135040|ref|XP_001663403.1| proteasome subunit beta type 5,8 [Aedes aegypti]
 gi|108870309|gb|EAT34534.1| proteasome subunit beta type 5,8 [Aedes aegypti]
          Length = 282

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 12/187 (6%)

Query: 11  VKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++  H TT L  R  G V++A D + + GQ +     +K+  +    ++   AG +AD  
Sbjct: 68  MEFDHGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVEINDY-LLGTLAGGAADCV 126

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVIT 122
                L K+   Y  +        A    M   +   + M L         DK    +  
Sbjct: 127 YWDRVLAKECRIYELRNKERISVAAASKIMSNIVYYYKGMGLSMGMMLAGYDKRGPQLYY 186

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHN 179
              +       V ++GSG  YA     +      +   A+++ R+A+  A     Y+   
Sbjct: 187 IDSEGTRTPGKVFSVGSGSIYAYGVLDSGYKWDLTDEEAQDLGRRAIYHATHRDAYSGGI 246

Query: 180 IVLETLK 186
           + +  +K
Sbjct: 247 VRVYHIK 253


>gi|331240621|ref|XP_003332961.1| proteasome subunit beta type-5 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309311951|gb|EFP88542.1| proteasome subunit beta type-5 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 319

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    +++A D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 103 HGTTTLAFRFQHGIIVAVDSRATAGSYIASGTVKKVIEINPF-LLGTMAGGAADCQYWET 161

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +  +        A    +   + + + M L         D     +     D
Sbjct: 162 YLGIQCRLHELRNKSRISVAAASKYLSNLVYSYKGMGLSMGTMICGWDGAGPGLYYVDSD 221

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               +  V ++GSG ++A            S   A E+ R+++  A     ++ + + L 
Sbjct: 222 GTRLKGDVFSVGSGSTFAYGVLDQGYHWDLSVDDALELGRRSIYAAGHRDAFSGNTLNLY 281

Query: 184 TLKVG 188
            +K  
Sbjct: 282 HVKED 286


>gi|291403557|ref|XP_002718121.1| PREDICTED: proteasome beta 5 subunit [Oryctolagus cuniculus]
          Length = 263

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|195134726|ref|XP_002011788.1| GI10892 [Drosophila mojavensis]
 gi|193906911|gb|EDW05778.1| GI10892 [Drosophila mojavensis]
          Length = 322

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 11/177 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G +++A D + S G  +   + RKV ++ K  I+   AG +AD      
Sbjct: 72  HGTTTLGFKYKGGIILAADSRASNGNFIASQSMRKVVQVHK-KILGTIAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L  +   +     R     +    +      L         M+   D     ++   GD
Sbjct: 131 VLTMECRLHELTYHRPLSVKSVARILSNIAYKLRGLGLSMGMMLAGYDFDGPRLVYVDGD 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
               E  + ++GSG  +AL    +        EE   +A +++  A  +  YT   +
Sbjct: 191 GSSVEGHLFSVGSGCCFALGILDSYYKYDMEDEEAYCLAMRSIYHATYLDSYTGGLV 247


>gi|221091547|ref|XP_002156248.1| PREDICTED: similar to LMP X [Hydra magnipapillata]
          Length = 265

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 71  HGTTTLAFKFKHGVIVAVDSRASAGSYIASQTVKKVIEINPY-LLGTMAGGAADCAFWQR 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +   + M L         DK    +     D
Sbjct: 130 VLAKECRLYQLRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSD 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
               +  + ++GSG +YA     A      + EE   +  +A+  A      +  
Sbjct: 190 GSRLKGDLFSVGSGSTYAYGVLDADHKWDLTLEEAYDLGNRAIYHATHRDAGSGG 244


>gi|31874085|emb|CAD97956.1| hypothetical protein [Homo sapiens]
          Length = 266

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 60  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 118

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 119 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 178

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 179 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 238


>gi|4506201|ref|NP_002788.1| proteasome subunit beta type-5 isoform 1 [Homo sapiens]
 gi|197099702|ref|NP_001126063.1| proteasome subunit beta type-5 precursor [Pongo abelii]
 gi|187608890|sp|P28074|PSB5_HUMAN RecName: Full=Proteasome subunit beta type-5; AltName:
           Full=Macropain epsilon chain; AltName:
           Full=Multicatalytic endopeptidase complex epsilon chain;
           AltName: Full=Proteasome chain 6; AltName:
           Full=Proteasome epsilon chain; AltName: Full=Proteasome
           subunit MB1; AltName: Full=Proteasome subunit X; Flags:
           Precursor
 gi|187608892|sp|Q5R8S2|PSB5_PONAB RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
 gi|1262338|emb|CAA64838.1| proteasome [Homo sapiens]
 gi|35505516|gb|AAH57840.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Homo
           sapiens]
 gi|55730230|emb|CAH91838.1| hypothetical protein [Pongo abelii]
 gi|78395069|gb|AAI07721.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Homo
           sapiens]
 gi|119586597|gb|EAW66193.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
           CRA_a [Homo sapiens]
 gi|119586599|gb|EAW66195.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
           CRA_a [Homo sapiens]
 gi|189053214|dbj|BAG34836.1| unnamed protein product [Homo sapiens]
 gi|261861254|dbj|BAI47149.1| proteasome (prosome, macropain) subunit, beta type, 5 [synthetic
           construct]
 gi|312153006|gb|ADQ33015.1| proteasome (prosome, macropain) subunit, beta type, 5 [synthetic
           construct]
          Length = 263

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|332223022|ref|XP_003260670.1| PREDICTED: proteasome subunit beta type-5-like isoform 1 [Nomascus
           leucogenys]
          Length = 263

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|109082916|ref|XP_001105158.1| PREDICTED: proteasome subunit beta type-5 [Macaca mulatta]
          Length = 263

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|241951736|ref|XP_002418590.1| macropain subunit, putative; multicatalytic endopeptidase complex
           subunit, putative; proteasome component, putative;
           proteinase ysce subunit, putative [Candida dubliniensis
           CD36]
 gi|223641929|emb|CAX43893.1| macropain subunit, putative [Candida dubliniensis CD36]
          Length = 285

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  +      KV R+    ++   AG +AD      
Sbjct: 72  HGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIRINPF-LLGTMAGGAADCQYWET 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   + M L           K    +     
Sbjct: 131 WLGTQCRLHELREKERISVAAASKILSNLVYQYKGMGLSMGTMICGHTAKEGPTIYYVDS 190

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  V  +GSG ++A     +      S E+   + ++++  A     Y+  ++ L
Sbjct: 191 DGTRLKGDVFCVGSGQTFAYGVLDSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSVNL 250


>gi|160333293|ref|NP_001099197.2| proteasome subunit beta type-5 [Rattus norvegicus]
 gi|149063910|gb|EDM14180.1| proteasome (prosome, macropain) subunit, beta type 5, isoform CRA_a
           [Rattus norvegicus]
          Length = 263

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|307195303|gb|EFN77251.1| Proteasome subunit beta type-5 [Harpegnathos saltator]
          Length = 287

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 12/187 (6%)

Query: 7   KHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           KH  +K  H TT L  +  G +++A D + + GQ +  +  +K+  +    ++   AG +
Sbjct: 66  KHLKIKFDHGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVEINDY-LLGTLAGGA 124

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD       L K+   Y  +        A    +   + N + M L         DK   
Sbjct: 125 ADCVYWDRVLAKQCRMYELRNRERISIAAASKLLSNMIYNYKGMGLSIGMMLAGWDKRGP 184

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +     +       V ++GSG  +A     +      +   A E+ R+++  A     Y
Sbjct: 185 GLYYVDSEGTRTPGKVFSVGSGSVFAFGVLDSGYKWDLTDEEAYELGRRSIYHATHRDAY 244

Query: 176 TNHNIVL 182
           +   I +
Sbjct: 245 SGGIIRV 251


>gi|301624547|ref|XP_002941560.1| PREDICTED: proteasome subunit beta type-5 [Xenopus (Silurana)
           tropicalis]
          Length = 257

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 51  LHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 109

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 110 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 169

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +       V ++GSG  YA        + +     A+E+AR+++  A     Y+   + L
Sbjct: 170 EGNRVSGSVFSVGSGSMYAYGVLDRGYNYEMEVEEAQELARRSIYQATYRDAYSGGVVNL 229


>gi|170088512|ref|XP_001875479.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164650679|gb|EDR14920.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 307

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 12/186 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            D +  +K+ H TT L  R  G V++A D + + G  V     +KV  +    ++   AG
Sbjct: 64  ADPNCRIKIQHGTTTLAFRFQGGVIVAVDSRATAGSYVASGTVKKVIEINPY-LLGTMAG 122

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L      +  +        A    +   + + + M L         DKT
Sbjct: 123 GAADCQYWETYLGMHCRLHELRNRERISVSAASKYLSNLVYSYKGMGLSMGTMICGWDKT 182

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              V     D    +  + ++GSG ++A            +   A+E+ R+++  A    
Sbjct: 183 GPAVFYVDSDGTRLKGDLFSVGSGSTFAYGVLDQGYRWDLTDAEAQELGRRSIYAAGHRD 242

Query: 174 VYTNHN 179
            ++ ++
Sbjct: 243 AFSGNS 248


>gi|61357317|gb|AAX41370.1| proteasome subunit beta type 8 [synthetic construct]
          Length = 272

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 57  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 116 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 175

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 176 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 235

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 236 SYSGGVVNM 244


>gi|317032170|ref|XP_001394180.2| proteasome component PRE2 [Aspergillus niger CBS 513.88]
          Length = 296

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 71/209 (33%), Gaps = 25/209 (11%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  + + +       
Sbjct: 57  SNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKPS 116

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD    L  L ++   +  +  R     A    +       + M 
Sbjct: 117 NEPTPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGMG 176

Query: 111 LIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AE 159
           L           +    +     D       +  +GSG ++A     A      +   A 
Sbjct: 177 LSMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEAL 236

Query: 160 EIARKAMSIAADICVYTNHNIVLETLKVG 188
           E+ R+++  A     Y+   I L  +K  
Sbjct: 237 ELGRRSILAAMHRDAYSGGFINLYHVKEE 265


>gi|73962595|ref|XP_537370.2| PREDICTED: similar to proteasome beta 5 subunit [Canis familiaris]
          Length = 263

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|90991369|dbj|BAE93066.1| low molecular mass polypeptide [Lethenteron japonicum]
          Length = 204

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 11/178 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD       
Sbjct: 1   GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCMYWERV 59

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           L K+   Y  +        A    +   +   + M L         DK    +     + 
Sbjct: 60  LAKQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKKGPGLYYVDDEG 119

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +     + A+GSG  YA     +      S EE   + R+A++ A     Y+   + L
Sbjct: 120 MRLPGSMFAVGSGSPYAFGVLDSGYREDLSKEEAYDLGRRAIASATHRDAYSGGVVNL 177


>gi|145640469|ref|ZP_01796053.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           R3021]
 gi|145275055|gb|EDK14917.1| ATP-dependent protease peptidase subunit [Haemophilus influenzae
           22.4-21]
          Length = 150

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 94/149 (63%), Positives = 122/149 (81%), Gaps = 2/149 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGV 134
           E+KLE +   LL+S+VELAKDWR D+ LR LEAM+++AD+  +L+ITG+GDV++P E+ +
Sbjct: 62  ERKLEMHQGHLLKSAVELAKDWRTDRALRKLEAMLIVADEKESLIITGIGDVVQPEEDQI 121

Query: 135 MAIGSGGSYALSAARALM-STQNSAEEIA 162
           +AIGSGG+YALSAARAL+ +T+ SA EI 
Sbjct: 122 LAIGSGGNYALSAARALVENTELSAXEIC 150


>gi|255089791|ref|XP_002506817.1| predicted protein [Micromonas sp. RCC299]
 gi|226522090|gb|ACO68075.1| predicted protein [Micromonas sp. RCC299]
          Length = 291

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L    +  VVIA D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 61  HGTTTLGFIFEHGVVIAVDSRASQGPYISSQTVKKVIEINPY-LLGTMAGGAADCQFWQR 119

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L  +   +  +  +          +   L            M+   D     +     D
Sbjct: 120 NLGIQCRLHELENGKRISVAGASKLLANTLYGYRGQGLSMGTMVAGWDLKGPGLYYVDSD 179

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +    ++GSG  +A            S   A E+ R+A+  A     ++   I +
Sbjct: 180 GTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVEEACELGRRAIYHATFRDAFSGGTISV 238


>gi|332223024|ref|XP_003260671.1| PREDICTED: proteasome subunit beta type-5-like isoform 2 [Nomascus
           leucogenys]
          Length = 257

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|971309|dbj|BAA07954.1| low molecular mass protein-7 (LMP-7) homolog [Xenopus laevis]
          Length = 271

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT L  +    V++A D + S G  +    A KV  +    ++   +GS+AD     
Sbjct: 64  WHGTTTLAFKFKHGVIVAVDSRASAGSYIASLKANKVIEINPY-LLGTMSGSAADCQHWE 122

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMG 125
             L K+   Y  +        +    +   +            MI   DK    +     
Sbjct: 123 RLLAKECRLYQLRNNSRISVSSASKLLCNMMLQYRGSGLSVGSMICGWDKKGPGLYYVDD 182

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +       + + GSG SYA     +      + EE   + R A+S A     Y+   + +
Sbjct: 183 NGTRLCGDIFSTGSGNSYAYGVMDSGYRFDLTPEEAYDLGRHAISYATHRDNYSGGVVNM 242


>gi|301781284|ref|XP_002926051.1| PREDICTED: proteasome subunit beta type-5-like [Ailuropoda
           melanoleuca]
 gi|281343378|gb|EFB18962.1| hypothetical protein PANDA_015661 [Ailuropoda melanoleuca]
          Length = 263

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|121699289|ref|XP_001267971.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
 gi|119396113|gb|EAW06545.1| proteasome component Pre2, putative [Aspergillus clavatus NRRL 1]
          Length = 296

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 72/209 (34%), Gaps = 25/209 (11%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  + + +       
Sbjct: 57  SNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKKQ 116

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD    L  L ++   +  +  R     A    +     + + M 
Sbjct: 117 NAPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYSYKGMG 176

Query: 111 LIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-- 160
           L           +    +     D       +  +GSG ++A     A      + EE  
Sbjct: 177 LSMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEAL 236

Query: 161 -IARKAMSIAADICVYTNHNIVLETLKVG 188
            + R+++  A     Y+   I L  +K  
Sbjct: 237 QLGRRSILAAMHRDAYSGGFINLYHVKEE 265


>gi|297290551|ref|XP_001115562.2| PREDICTED: proteasome subunit beta type-8-like [Macaca mulatta]
          Length = 276

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  + M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERNVQIDMAHGTTTLAFKFQHGVIVAVDSRASAGSYIGALRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 180 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAHATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|126278093|ref|XP_001379940.1| PREDICTED: similar to proteasome [Monodelphis domestica]
          Length = 263

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S   S   A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGVTFSVGSGSVYAYGVMDRGYSFDLSVEDAYDLARRAIYQATYRDAYSGGVVNL 235


>gi|1708781|emb|CAA66313.1| LMP7-like protein [Botryllus schlosseri]
          Length = 257

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    VV+A D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 55  HGTTTLAFKFQHGVVVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCMFWER 113

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   + N + M L         DK    +     D
Sbjct: 114 VLAKQCRIYELRNKERISVAAASKILANMVYNYKGMGLSMGTMICGWDKHGPGLFYVDSD 173

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +  + ++GSG +YA     +      S   A ++ ++++  A     Y+   + L
Sbjct: 174 GQRLKGNMFSVGSGSTYAYGVMDSGYRYDLSVAEALDLGKRSIYHATHRDAYSGGVVNL 232


>gi|4758970|ref|NP_004150.1| proteasome subunit beta type-8 isoform E1 proprotein [Homo sapiens]
 gi|34637|emb|CAA47026.1| LMP7 [Homo sapiens]
 gi|36057|emb|CAA44482.1| RING10 [Homo sapiens]
 gi|38481|emb|CAA78705.1| proteasome subunit LMP7 [Homo sapiens]
 gi|1054746|emb|CAA60786.1| LMP7 [Homo sapiens]
 gi|12654559|gb|AAH01114.1| Proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|55961336|emb|CAI17713.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|55961478|emb|CAI18139.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|56207310|emb|CAI18625.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|119624049|gb|EAX03644.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7), isoform CRA_a [Homo
           sapiens]
 gi|123230979|emb|CAM25947.1| proteasome (prosome, macropain) subunit beta type 8 (large
           multifunctional protease 7) [Homo sapiens]
 gi|123296525|emb|CAM26262.1| proteasome (prosome, macropain) subunit beta type 8 (large
           multifunctional protease 7) [Homo sapiens]
 gi|168983736|emb|CAQ07781.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|168984794|emb|CAQ08448.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|168985346|emb|CAQ08494.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|168985575|emb|CAQ10286.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|228159|prf||1717394A RING10 gene
          Length = 272

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 57  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 116 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 175

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 176 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 235

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 236 SYSGGVVNM 244


>gi|254580841|ref|XP_002496406.1| ZYRO0C17688p [Zygosaccharomyces rouxii]
 gi|238939297|emb|CAR27473.1| ZYRO0C17688p [Zygosaccharomyces rouxii]
          Length = 287

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + S G  V     +KV  +    ++   AG +AD      
Sbjct: 74  HGTTTLAFRFQGGIIVAVDSRASAGSWVASQTVKKVIEINPF-LLGTMAGGAADCQYWET 132

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    V     
Sbjct: 133 WLGAQCRLHELKEKERISVAAASKILCNLVYEYKGYGLSMGTMICGYTKKEGPTVYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S EE   + ++++  A     Y+  ++ L
Sbjct: 193 DGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEEALYLGKRSIIAATHRDAYSGGSVNL 252


>gi|226471266|emb|CAX70714.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
           japonicum]
          Length = 264

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +  G V++A D + + G  +     +K+  + K  ++   AG +AD     
Sbjct: 60  LHGTTTLAFKYSGGVIVAADSRATAGSYIASGTTKKIIEINKY-LLGTMAGGAADCQFWE 118

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             L K    +  +        A    +   + N + M L         DK    V     
Sbjct: 119 RVLAKHCRLFELRNKERISVAAASKLLANMVYNYKGMGLSIGTTIVGWDKNGPGVYYVDT 178

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           D       + ++GSG  YA     A    + S   A E+A++++  A      +   + L
Sbjct: 179 DGNRTPGNLFSVGSGSPYAYGVLDAGYKYEMSDKDAYELAKRSIFHATHRDAASGGFVNL 238


>gi|332246135|ref|XP_003272205.1| PREDICTED: proteasome subunit beta type-8-like [Nomascus
           leucogenys]
          Length = 276

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIGALRTNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSIGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 180 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|194038905|ref|XP_001924480.1| PREDICTED: proteasome subunit beta type-5 [Sus scrofa]
          Length = 263

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+  ++ L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGSVNL 235


>gi|49456283|emb|CAG46462.1| PSMB8 [Homo sapiens]
          Length = 272

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 57  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 116 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 175

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 176 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 235

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 236 SYSGGVVNM 244


>gi|90076164|dbj|BAE87762.1| unnamed protein product [Macaca fascicularis]
          Length = 263

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADRSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|221090686|ref|XP_002162379.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
           type 5 [Hydra magnipapillata]
          Length = 277

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 60/175 (34%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 71  HGTTTLAFKFKHGVIVAVDSRASAGSYIASQTVKKVIEINPY-LLGTMAGGAADCAFWQR 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +   + M L         DK    +     D
Sbjct: 130 VLAKECRLYQLRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSD 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
               +  + ++GSG +YA     A      + EE   +  +A+  A      +  
Sbjct: 190 GSRLKGDLFSVGSGSTYAYGVLDADHKWDLTLEEAYDLGNRAIYHATHRDAGSGG 244


>gi|50288021|ref|XP_446439.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525747|emb|CAG59366.1| unnamed protein product [Candida glabrata]
          Length = 286

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +V+A D + + GQ V     +KV  +    ++   AG +AD      
Sbjct: 73  HGTTTLAFRFQGGIVVAVDSRATAGQWVASQTVKKVIEINPF-LLGTMAGGAADCQFWET 131

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 132 WLGSQCRLHELKEKERISVAAASKILGNLVYQYKGAGLSMGTMICGYTKKEGPTIYYVDS 191

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S EE   + ++++  AA    Y+  +I L
Sbjct: 192 DGTRLKGDLFCVGSGQTFAYGVLDSNYKWDLSVEEALYLGKRSILAAAHRDAYSGGSINL 251


>gi|159481070|ref|XP_001698605.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
           reinhardtii]
 gi|158282345|gb|EDP08098.1| 20S proteasome beta subunit E, type beta 5 [Chlamydomonas
           reinhardtii]
          Length = 273

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       V+IA D + ++G  +     +KV  +    ++   AG +AD      
Sbjct: 58  HGTTTLGFIFQHGVIIAVDSRATMGAYISSQTVKKVIEI-NKFLLGTMAGGAADCQFWQR 116

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   Y     +     A    +   + +   M L         D T   +     D
Sbjct: 117 NLGMQCRLYELNNGKRITVRAASKLLSNVMFSYRGMGLSMGTMVAGWDPTGPGLYYVDSD 176

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
               +  + ++GSG  YA     A          A E+ R+++  A      +   + +
Sbjct: 177 GQRTKGQIFSVGSGSLYAYGVLDAGYRWDMPVEEAVELGRRSIYHAGFRDCASGGTVSV 235


>gi|5833459|gb|AAD53518.1|AF155578_1 proteasome subunit beta 5 [Danio rerio]
          Length = 255

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 49  LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 107

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 108 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDS 167

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +       + A+GSG  YA     + +    +   A ++ R+A+  A     Y+   + L
Sbjct: 168 EGNRVCGDLFAVGSGSMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNL 227


>gi|6249512|emb|CAB60065.1| lmp7 [Mus musculus]
          Length = 275

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 12/187 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           +++  ++M H TT L  +    V++A D + + G  +      KV  +    ++   +G 
Sbjct: 62  ERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPY-LLGTMSGC 120

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L K+   Y  +        A    +   +     M L         DK  
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKG 180

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     +       + + GSG +YA     +      S EE   + R+A++ A     
Sbjct: 181 PGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDN 240

Query: 175 YTNHNIV 181
           Y+   + 
Sbjct: 241 YSGGVVN 247


>gi|169146058|emb|CAQ14651.1| proteasome (prosome, macropain) subunit, beta type, 5 [Danio rerio]
          Length = 269

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 63  LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 121

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 122 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDS 181

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +       + A+GSG  YA     + +    +   A ++ R+A+  A     Y+   + L
Sbjct: 182 EGNRVCGDLFAVGSGSMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNL 241


>gi|60826857|gb|AAX36774.1| proteasome subunit beta type 8 [synthetic construct]
          Length = 273

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 57  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 116 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 175

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 176 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 235

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 236 SYSGGVVNM 244


>gi|114606761|ref|XP_001167241.1| PREDICTED: proteasome subunit beta type-8 isoform 2 [Pan
           troglodytes]
          Length = 272

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 57  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
           S+AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 116 SAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 175

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 176 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 235

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 236 SYSGGVVNM 244


>gi|170065467|ref|XP_001867951.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
 gi|167882529|gb|EDS45912.1| proteasome subunit beta type 8 [Culex quinquefasciatus]
          Length = 263

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G V++A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 53  HGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVEINDY-LLGTLAGGAADCVYWDR 111

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    M   +   + M L         DK    +     +
Sbjct: 112 VLAKECRIYELRNKERISVAAASKIMSNIVYYYKGMGLSMGMMLAGYDKRGPQLYYIDSE 171

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  V ++GSG  YA     +      S   A+++ R+A+  A     Y+   + + 
Sbjct: 172 GTRTPGKVFSVGSGSIYAYGVLDSGYRWDLSDEDAQDLGRRAIYHATHRDAYSGGIVRVY 231

Query: 184 TLK 186
            +K
Sbjct: 232 HIK 234


>gi|972990|gb|AAA75037.1| 20S proteasome subunit Lmp7 [Mus musculus]
          Length = 276

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 12/188 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           +++  ++M H TT L  +    V++A D + + G  +      KV  +    ++   +G 
Sbjct: 62  ERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPY-LLGTMSGC 120

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L K+   Y  +        A    +   +     M L         DK  
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKG 180

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     +       + + GSG +YA     +      S EE   + R+A++ A     
Sbjct: 181 PGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDN 240

Query: 175 YTNHNIVL 182
           Y+   + +
Sbjct: 241 YSGGVVNM 248


>gi|50878269|ref|NP_571226.1| proteasome subunit beta type-5 [Danio rerio]
 gi|48734690|gb|AAH71478.1| Proteasome (prosome, macropain) subunit, beta type, 5 [Danio rerio]
          Length = 269

 Score =  134 bits (337), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 63  LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 121

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 122 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDS 181

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +      G+ A+GSG  YA     + +    +   A ++ R+A+  A     Y+   + L
Sbjct: 182 EGNRVCGGLFAVGSGSMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNL 241


>gi|116180334|ref|XP_001220016.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88185092|gb|EAQ92560.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 283

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 13/190 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +   +++   AG
Sbjct: 56  SNPSCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSDLLGTMAG 114

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---- 119
            +AD    L  L  +   +  +  R     A    +   +   + M L            
Sbjct: 115 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYQYKGMGLSMGTMCAGVTKE 174

Query: 120 ----VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     +      +   A E+  +++  A   
Sbjct: 175 EGAALYYIDSDGTRLAGDLFCVGSGQTFAYGVLDSEYRWDLTTEEALELGSRSILAATHR 234

Query: 173 CVYTNHNIVL 182
             Y+   I L
Sbjct: 235 DAYSGGFINL 244


>gi|149245104|ref|XP_001527086.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449480|gb|EDK43736.1| proteasome component PRE2 precursor [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 282

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 64/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  +      KV R+    ++   AG +AD      
Sbjct: 69  HGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIRINP-MLLGTMAGGAADCQYWET 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   + + + M L           K    +     
Sbjct: 128 WLGTQCRLHELREKERISVAAASKILSNLVYSYKGMGLSMGTMICGHTKKEGPTIYYVDS 187

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      + EE   + ++++  A     Y+  +I L
Sbjct: 188 DGTRLKGDLFCVGSGQTFAYGVLDSQYKWDLTVEEALYLGKRSILAATHRDAYSGGSINL 247


>gi|972986|gb|AAA75035.1| 20S proteasome subunit Lmp7 [Mus musculus]
 gi|972988|gb|AAA75036.1| 20S proteasome subunit Lmp7 [Mus musculus]
 gi|15489383|gb|AAH13785.1| Proteasome (prosome, macropain) subunit, beta type 8 (large
           multifunctional peptidase 7) [Mus musculus]
          Length = 276

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 12/188 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           +++  ++M H TT L  +    V++A D + + G  +      KV  +    ++   +G 
Sbjct: 62  ERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPY-LLGTMSGC 120

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L K+   Y  +        A    +   +     M L         DK  
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKG 180

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     +       + + GSG +YA     +      S EE   + R+A++ A     
Sbjct: 181 PGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDN 240

Query: 175 YTNHNIVL 182
           Y+   + +
Sbjct: 241 YSGGVVNM 248


>gi|313226004|emb|CBY21147.1| unnamed protein product [Oikopleura dioica]
 gi|313245698|emb|CBY40350.1| unnamed protein product [Oikopleura dioica]
          Length = 287

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 77  HGTTCLAFKFKHGVMVATDSRATAGGYIASQEVKKVIEINPY-LLGTMAGGAADCQFWER 135

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   Y  +        A    +   +   + M L         DK    +      
Sbjct: 136 VLAMECRLYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKKGPGLYYVDDG 195

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               E  + ++GSG  +A        S       A+++A +++  A      +   + L
Sbjct: 196 GQRLEGSLFSVGSGSLFAYGVLDEGYSYDIEVEAAKDLAIRSIYHATYRDAASGGFVNL 254


>gi|303283522|ref|XP_003061052.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457403|gb|EEH54702.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 286

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L    +  VVIA D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 58  HGTTTLGFIFEHGVVIAVDSRASQGPYISSQTVKKVIEINPY-LLGTMAGGAADCQFWQR 116

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L  +   +  +  +          +   L            M+   D     +     D
Sbjct: 117 NLGIQCRLHELENGKRISVSGASKLLSNTLYGYRGQGLSMGTMVAGWDLNGPGLYYVDSD 176

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +    ++GSG  +A            S   A E+ R+A+  A     ++   + +
Sbjct: 177 GTRLKGKRFSVGSGSLFAYGVLDQGYRWDLSVEDACELGRRAIYHATFRDAFSGGTVSV 235


>gi|321260090|ref|XP_003194765.1| proteasome component [Cryptococcus gattii WM276]
 gi|317461237|gb|ADV22978.1| Proteasome component, putative [Cryptococcus gattii WM276]
          Length = 301

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD      
Sbjct: 81  HGTTTLAFRFKGGIIVAVDSRATAGSYVASGTVKKVIEI-NKFLLGTMAGGAADCQYWET 139

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +  +        A    +   +   + M L         DKT   +     D
Sbjct: 140 YLGMQCRLHELRNKERISVAAASKILSNIVYQYKGMGLSMGTMVCGWDKTGPCIFYVDDD 199

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
               +  + ++GSG ++A            S   A+E+ R+++  A     Y+ +
Sbjct: 200 GQRLKGDLFSVGSGSTFAYGVLDQGYKWDLSDEEAQELGRRSIVAAGHRDAYSGN 254


>gi|158303322|ref|NP_034854.2| proteasome subunit beta type-8 precursor [Mus musculus]
 gi|1172603|sp|P28063|PSB8_MOUSE RecName: Full=Proteasome subunit beta type-8; AltName: Full=Low
           molecular mass protein 7; AltName: Full=Macropain
           subunit C13; AltName: Full=Multicatalytic endopeptidase
           complex subunit C13; AltName: Full=Proteasome component
           C13; AltName: Full=Proteasome subunit beta-5i; Flags:
           Precursor
 gi|494969|gb|AAB46392.1| proteasome subunit [Mus musculus]
 gi|582390|emb|CAA45779.1| proteasome subunit MC13 [Mus musculus]
 gi|972982|gb|AAA75033.1| 20S proteasome subunit Lmp7 [Mus musculus]
 gi|972984|gb|AAA75034.1| 20S proteasome subunit Lmp7 [Mus musculus]
 gi|2555193|gb|AAB81532.1| 20S proteosome subunit lmp7 [Mus musculus]
 gi|26327623|dbj|BAC27555.1| unnamed protein product [Mus musculus]
 gi|74177914|dbj|BAE29756.1| unnamed protein product [Mus musculus]
 gi|74193489|dbj|BAE20682.1| unnamed protein product [Mus musculus]
 gi|74213418|dbj|BAE35524.1| unnamed protein product [Mus musculus]
 gi|148678314|gb|EDL10261.1| proteosome (prosome, macropain) subunit, beta type 8 (large
           multifunctional peptidase 7) [Mus musculus]
          Length = 276

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 12/188 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           +++  ++M H TT L  +    V++A D + + G  +      KV  +    ++   +G 
Sbjct: 62  ERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPY-LLGTMSGC 120

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L K+   Y  +        A    +   +     M L         DK  
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKG 180

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     +       + + GSG +YA     +      S EE   + R+A++ A     
Sbjct: 181 PGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDN 240

Query: 175 YTNHNIVL 182
           Y+   + +
Sbjct: 241 YSGGVVNM 248


>gi|328766804|gb|EGF76856.1| hypothetical protein BATDEDRAFT_14510 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 267

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  +    VV+A D + ++G  +     +KV  +    ++   AG +AD      
Sbjct: 5   KGTTTLAFKFAKGVVVAVDSRATMGSYIGSQTVKKVIEINPY-LLGTMAGGAADCSFWER 63

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L ++   Y  +        A    +   +   + M L         DK    +     D
Sbjct: 64  ELGRRARLYELRNKERISVAAASKLLSNMVYGYKGMGLSMGTMITGWDKQGPGLFYVDSD 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +N + ++GSG +YA     A      S   A ++AR+++  A     Y+  ++ +
Sbjct: 124 GQRLKNHMFSVGSGSTYAYGVLDAGYDYDLSVNDAIDLARRSIYHATFRDAYSGGSVNV 182


>gi|302836892|ref|XP_002950006.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
           nagariensis]
 gi|300264915|gb|EFJ49109.1| hypothetical protein VOLCADRAFT_74437 [Volvox carteri f.
           nagariensis]
          Length = 272

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       V+IA D + ++G  +     +KV  + K  +I   AG +AD      
Sbjct: 57  HGTTTLGFIFQHGVIIAVDSRATMGSFISSQTVKKVIEINKH-LIGTMAGGAADCQFWQR 115

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   Y     +     A    +   + +   M L         D T   +     D
Sbjct: 116 NLGMRCRLYELNNGKRITVCAASKLLANTMFSYRGMGLSMGTMVAGWDSTGPGLYYVDSD 175

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +  + ++GSG  YA     +      S   A E+ R+++  A      +   + +
Sbjct: 176 GQRTKGQIFSVGSGSLYAYGVLDSGYRWDLSVEEAIELGRRSIYHAGFRDCASGGTVSV 234


>gi|261884678|ref|ZP_06008717.1| ATP-dependent protease peptidase subunit [Campylobacter fetus
           subsp. venerealis str. Azul-94]
          Length = 180

 Score =  134 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 82/170 (48%), Positives = 114/170 (67%), Gaps = 2/170 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            HA TIL  +     +I GDGQVS   TV+K NA K+R+L  G I+AGFAGS+ADAF L 
Sbjct: 2   FHARTILAYKGTKGSIIGGDGQVSFVHTVLKGNAVKIRKLLGGRILAGFAGSTADAFNLF 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           +  E+ L      LL + +  +K+WR DK LR LEAM+L+ D+    +++G GDV+EPE+
Sbjct: 62  DMSERILVSTKGDLLPAVMAFSKEWRKDKVLRKLEAMMLVLDRVHIFLLSGTGDVVEPED 121

Query: 133 -GVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNI 180
             + AIGSGG+YAL+AARAL      + EE+ ++++ IA +IC+YTN NI
Sbjct: 122 GTIAAIGSGGNYALAAARALDKFADINEEELVKESLKIAGEICIYTNTNI 171


>gi|126136741|ref|XP_001384894.1| hypothetical protein PICST_36375 [Scheffersomyces stipitis CBS
           6054]
 gi|126092116|gb|ABN66865.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 282

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  +      KV R+    ++   AG +AD      
Sbjct: 69  HGTTTLAFRFQGGIIVAVDSRATQGNWIASQTVNKVIRINPF-LLGTMAGGAADCQYWET 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   + M L           K    +     
Sbjct: 128 WLGTQCRLHELREKERISVAAASKILGNLVYEYKGMGLSMGTMVCGYTKKEGPTIYYVDS 187

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      + EE   + ++++  A     Y+  ++ L
Sbjct: 188 DGSRLKGDLFCVGSGQTFAYGVLDSEYKWDLTVEEALYLGKRSILAATHRDAYSGGSVNL 247


>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
 gi|17380268|sp|Q9V0N9|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
          Length = 207

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 10/186 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K   TT + +     VV+A D + SLG  V   N  K+ ++ +   IAG AG   D   L
Sbjct: 7   KFKGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAG-AGDVGDILNL 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK------YLRNLEAMILIADKTITLVITGMG 125
           +  L  + + Y  Q  +     A    +         L  L   ++        + +   
Sbjct: 66  VRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEKPRLYSVDM 125

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                E+  +A GSG  +A S   +         E   IA +A++ A    V++   I++
Sbjct: 126 MGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMV 185

Query: 183 ETLKVG 188
            T+   
Sbjct: 186 VTITEE 191


>gi|302660177|ref|XP_003021770.1| proteasome component Pre3, putative [Trichophyton verrucosum HKI
           0517]
 gi|291185685|gb|EFE41152.1| proteasome component Pre3, putative [Trichophyton verrucosum HKI
           0517]
          Length = 281

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 12/186 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  +     +KV  +    ++   AG +AD    L 
Sbjct: 64  HGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAGGAADCQYWLA 122

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +  R     A    +   + N + M L           +    +     
Sbjct: 123 YLGMQCRLHELRHKRRISVAAASKILANLVYNYKGMGLSMGTMCAGVTPEEGPALYYIDS 182

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D       +  +GSG ++A     A      + EE   +  +++  A     Y+   I L
Sbjct: 183 DGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEALALGSRSILAATHRDAYSGGFINL 242

Query: 183 ETLKVG 188
             +K  
Sbjct: 243 YHVKED 248


>gi|74222319|dbj|BAE26960.1| unnamed protein product [Mus musculus]
          Length = 276

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 12/188 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           +++  ++M H TT L  +    V++A D + + G  +      KV  +    ++   +G 
Sbjct: 62  ERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPY-LLGTMSGC 120

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L K+   Y  +        A    +   +     M L         DK  
Sbjct: 121 AADCQYWERLLAKECRLYYLRNGERISMSAASKLLSNMMLQYRGMGLSMGSMICGWDKKG 180

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     +       + + GSG +YA     +      S EE   + R+A++ A     
Sbjct: 181 PGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDN 240

Query: 175 YTNHNIVL 182
           Y+   + +
Sbjct: 241 YSGGVVNM 248


>gi|157423071|gb|AAI53590.1| Psmb5 protein [Danio rerio]
          Length = 269

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 63  LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 121

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 122 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDS 181

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +       + A+GSG  YA     + +    +   A ++ R+A+  A     Y+   + L
Sbjct: 182 EGNRVCGDLFAVGSGSMYAYGVVDSGLRYDLTIDEACDLGRRAIYQATYRDAYSGGQVNL 241


>gi|310790979|gb|EFQ26512.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 286

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 60  SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSVLLGTMAG 118

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L  +   +  +  R     A    +   + + + M L           +
Sbjct: 119 GAADCQYWLAWLGMQCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTKE 178

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A      +   A ++  +++  A   
Sbjct: 179 EGPALYYVDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTDQEALDLGSRSILAATHR 238

Query: 173 CVYTNHNIVLETLKVG 188
             ++   I L  +K  
Sbjct: 239 DAFSGGFINLYHVKEE 254


>gi|297661235|ref|XP_002809171.1| PREDICTED: proteasome subunit beta type-8-like isoform 2 [Pongo
           abelii]
          Length = 272

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 57  GERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIGALRVNKVIEINPY-LLGTMSG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 116 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 175

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 176 GPGLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 235

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 236 SYSGGVVNM 244


>gi|114606757|ref|XP_001167272.1| PREDICTED: proteasome subunit beta type-8 isoform 3 [Pan
           troglodytes]
          Length = 276

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
           S+AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 SAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 180 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|119469453|ref|XP_001257946.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
 gi|119406098|gb|EAW16049.1| proteasome component Pre2, putative [Neosartorya fischeri NRRL 181]
          Length = 296

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 71/209 (33%), Gaps = 25/209 (11%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  + + +       
Sbjct: 57  SNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKKQ 116

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD    L  L ++   +  +  R     A    +       + M 
Sbjct: 117 DTPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGMG 176

Query: 111 LIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AE 159
           L           +    +     D       +  +GSG ++A     A      +   A 
Sbjct: 177 LSMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDLTEEEAL 236

Query: 160 EIARKAMSIAADICVYTNHNIVLETLKVG 188
           E+ R+++  A     Y+   I L  +K  
Sbjct: 237 ELGRRSILAAMHRDAYSGGFINLYHVKEE 265


>gi|68482384|ref|XP_714824.1| hypothetical protein CaO19.2233 [Candida albicans SC5314]
 gi|68482509|ref|XP_714764.1| hypothetical protein CaO19.9775 [Candida albicans SC5314]
 gi|46436357|gb|EAK95720.1| hypothetical protein CaO19.9775 [Candida albicans SC5314]
 gi|46436420|gb|EAK95782.1| hypothetical protein CaO19.2233 [Candida albicans SC5314]
 gi|238883580|gb|EEQ47218.1| proteasome component PRE2 precursor [Candida albicans WO-1]
          Length = 285

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  +      KV R+    ++   AG +AD      
Sbjct: 72  HGTTTLAFRFQGGIIVAVDSRATAGNWIASQTVNKVIRINPF-LLGTMAGGAADCQFWET 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   + M L           K    +     
Sbjct: 131 WLGTQCRLHELREKERISVAAASKILSNLVYQYKGMGLSMGTMVCGHTAKEGPTIYYVDS 190

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  V  +GSG ++A     +      S E+   + ++++  A     Y+  ++ L
Sbjct: 191 DGTRLKGDVFCVGSGQTFAYGVLDSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSVNL 250


>gi|596142|gb|AAA56778.1| proteasome subunit LMP7 [Homo sapiens]
          Length = 276

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 180 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|322791530|gb|EFZ15921.1| hypothetical protein SINV_10172 [Solenopsis invicta]
          Length = 292

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 12/187 (6%)

Query: 7   KHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           K+  +K  H TT L  R  G +++A D + + GQ +  +  +K+  +    ++   AG +
Sbjct: 72  KNLKIKFDHGTTTLGFRYQGGIILAVDSRATGGQFIGSSTMKKIVEINDY-LLGTLAGGA 130

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD       L ++   Y  +        A    +   + N + M L         DK   
Sbjct: 131 ADCVYWDRVLARQCRMYELRNRERISIAAASKLLSNMIYNFKGMGLSIGMMLAGWDKRGP 190

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +     +       V ++GSG  +A     +      +   A E+ R+++  A     Y
Sbjct: 191 GLYYVDSEGTRTPGKVFSVGSGSVFAFGVLDSGYRWDLTDEQAYELGRRSIYHATHRDAY 250

Query: 176 TNHNIVL 182
           +   I +
Sbjct: 251 SGGIIRV 257


>gi|321469684|gb|EFX80663.1| hypothetical protein DAPPUDRAFT_303852 [Daphnia pulex]
          Length = 276

 Score =  133 bits (336), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 67/184 (36%), Gaps = 11/184 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G +V+A D + + GQ +   + +K+  +    ++   AG +AD      
Sbjct: 68  HGTTTLGFKYQGGIVLAVDSRATGGQYIGSGSVKKIIEINDF-LLGTMAGGAADCTYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   + N + M L         DK    +     D
Sbjct: 127 VLSKQCRLYELRNKERISVAAASKLLVNMVYNYKGMGLSMGVMIAGWDKKGPGLYYVDND 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  V ++GSG  YA     +      +   A E+ R+A+  A      +   I + 
Sbjct: 187 GTRTPGQVFSVGSGSLYAYGVLDSGYKPDLTDEEAYELGRRAIYHATYRDASSGGIIRVY 246

Query: 184 TLKV 187
            +K 
Sbjct: 247 HIKS 250


>gi|73747875|ref|NP_683720.2| proteasome subunit beta type-8 isoform E2 proprotein [Homo sapiens]
 gi|38482|emb|CAA78706.1| proteasome subunit LMP7 [Homo sapiens]
 gi|1054747|emb|CAA60787.1| LMP7 [Homo sapiens]
 gi|55961335|emb|CAI17712.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|55961477|emb|CAI18138.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|56207308|emb|CAI18623.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|119624050|gb|EAX03645.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7), isoform CRA_b [Homo
           sapiens]
 gi|123230977|emb|CAM25945.1| proteasome (prosome, macropain) subunit beta type 8 (large
           multifunctional protease 7) [Homo sapiens]
 gi|123296524|emb|CAM26261.1| proteasome (prosome, macropain) subunit beta type 8 (large
           multifunctional protease 7) [Homo sapiens]
 gi|168983734|emb|CAQ07779.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|168984791|emb|CAQ08445.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|168985344|emb|CAQ08492.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|208967166|dbj|BAG73597.1| proteasome (prosome, macropain) subunit beta type 8 [synthetic
           construct]
          Length = 276

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 180 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|225192981|dbj|BAH29681.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+ R+ ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGRRGIAHATHRDAYSGGSVNM 247


>gi|596140|gb|AAA56777.1| proteasome subunit LMP7 [Homo sapiens]
          Length = 276

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 180 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|1172602|sp|P28062|PSB8_HUMAN RecName: Full=Proteasome subunit beta type-8; AltName: Full=Low
           molecular mass protein 7; AltName: Full=Macropain
           subunit C13; AltName: Full=Multicatalytic endopeptidase
           complex subunit C13; AltName: Full=Proteasome component
           C13; AltName: Full=Proteasome subunit beta-5i; AltName:
           Full=Really interesting new gene 10 protein; Flags:
           Precursor
 gi|168985573|emb|CAQ10284.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
          Length = 276

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 180 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|255713154|ref|XP_002552859.1| KLTH0D03058p [Lachancea thermotolerans]
 gi|238934239|emb|CAR22421.1| KLTH0D03058p [Lachancea thermotolerans]
          Length = 287

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +V+A D + + G  +     +KV  +    ++   AG +AD      
Sbjct: 74  HGTTTLAFRFQGGIVVAVDSRATAGSWIASQTVKKVIEINPF-LLGTLAGGAADCQFWET 132

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 133 WLGTQCRLHELKEKERISVAAASKILSNLVYQYKGAGLSMGTMVCGYTKKEGPTIYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S EE   + ++++  A     Y+  ++ L
Sbjct: 193 DGTRLKGDMFCVGSGQTFAYGVLDSNYKWDLSVEEALYLGKRSILAATHRDAYSGGSVNL 252


>gi|225706814|gb|ACO09253.1| Proteasome subunit beta type 5 precursor [Osmerus mordax]
          Length = 221

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 11/188 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G +     +H TT L  +    V++A D + + G  +     +KV  +    ++   AG 
Sbjct: 8   GPERKIEFLHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGG 66

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L ++   Y  +        A    +   +   + M L         DK  
Sbjct: 67  AADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRG 126

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
             +     +       + A+GSG  YA     + +    +   A E+ R+A+  A     
Sbjct: 127 PGLYYVDSEGNRVCGDLFAVGSGSMYAYGVVDSGLRQDLTVEQACELGRRAIYQATYRDA 186

Query: 175 YTNHNIVL 182
           Y+   + L
Sbjct: 187 YSGGQVNL 194


>gi|210148640|gb|ACJ09226.1| proteasome subunit beta 5 [Helicoverpa armigera]
          Length = 280

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 69/185 (37%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G V++A D + + GQ +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFRYKGGVLLAVDSRATGGQFIGSQSMKKIVEINDY-LLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    M   + N + M L         DK    +     +
Sbjct: 131 VLAKQCRLYELRNRERISVAAASKLMANMVYNYKGMGLSMGMMLAGVDKRGAQLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  V ++GSG  YA     +  S   S   A+E+ R+A+  A     Y+   I + 
Sbjct: 191 GTRTPGKVFSVGSGSVYAFGVLDSGYSWDLSDKDAQELGRRAIYHATHRDAYSGGIIRVY 250

Query: 184 TLKVG 188
            +   
Sbjct: 251 HISEK 255


>gi|67526949|ref|XP_661536.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
 gi|40740051|gb|EAA59241.1| hypothetical protein AN3932.2 [Aspergillus nidulans FGSC A4]
 gi|259481493|tpe|CBF75064.1| TPA: proteasome component Pre2, putative (AFU_orthologue;
           AFUA_6G08310) [Aspergillus nidulans FGSC A4]
          Length = 296

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 25/209 (11%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            + +  +K+ H TT L  R  G +++  D + + G  +     +KV  + + +       
Sbjct: 57  SNPNCPIKLAHGTTTLAFRFQGGIIVCTDSRATAGNWIASQTVKKVIPVSRLSRGEDKPG 116

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD    L  L ++   +  +  R     A    +       +   
Sbjct: 117 SAPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYG 176

Query: 111 LIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AE 159
           L           +    +     D       +  +GSG ++A     A      +   A 
Sbjct: 177 LSMGTMLAGVTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEAL 236

Query: 160 EIARKAMSIAADICVYTNHNIVLETLKVG 188
           E+ R+++  A     Y+   I L  +K  
Sbjct: 237 ELGRRSILAAMHRDAYSGGFINLYHVKEE 265


>gi|296411495|ref|XP_002835466.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629250|emb|CAZ79623.1| unnamed protein product [Tuber melanosporum]
          Length = 282

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPDCPIKLAHGTTTLAFRFQGGIIVATDSRATQGSWISSQTVKKVIEI-NDKMLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------- 115
            +AD    L  L  +   +  +  R     A    +   +   + M L            
Sbjct: 116 GAADCQYWLGYLGVECRLHELRHKRRISVAAASKILSNLVYTYKGMGLSMGTMIAGVTAL 175

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
               +     D       +  +GSG ++A            S EE   +  +++  A   
Sbjct: 176 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDREYDYDLSTEEALALGSRSILAATHR 235

Query: 173 CVYTNHNIVLETLKVG 188
             Y+  +I L  +K  
Sbjct: 236 DAYSGGSINLYHVKEE 251


>gi|15126628|gb|AAH12246.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
          Length = 264

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|6755204|ref|NP_035316.1| proteasome subunit beta type-5 [Mus musculus]
 gi|187608891|sp|O55234|PSB5_MOUSE RecName: Full=Proteasome subunit beta type-5; AltName:
           Full=Macropain epsilon chain; AltName:
           Full=Multicatalytic endopeptidase complex epsilon chain;
           AltName: Full=Proteasome chain 6; AltName:
           Full=Proteasome epsilon chain; AltName: Full=Proteasome
           subunit X; Flags: Precursor
 gi|5757659|gb|AAD50536.1|AF060091_1 proteasome subunit X [Mus musculus]
 gi|2897806|dbj|BAA24916.1| PSMB5 [Mus musculus]
 gi|2897809|dbj|BAA24917.1| PSMB5 [Mus musculus]
 gi|74228773|dbj|BAE21876.1| unnamed protein product [Mus musculus]
 gi|77415527|gb|AAI06145.1| Proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
 gi|148704392|gb|EDL36339.1| mCG8712, isoform CRA_b [Mus musculus]
          Length = 264

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|159124282|gb|EDP49400.1| proteasome component Pre2, putative [Aspergillus fumigatus A1163]
          Length = 296

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 71/209 (33%), Gaps = 25/209 (11%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  + + +       
Sbjct: 57  SNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKKQ 116

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD    L  L ++   +  +  R     A    +       + M 
Sbjct: 117 DTPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGMG 176

Query: 111 LIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AE 159
           L           +    +     D       +  +GSG ++A     A      +   A 
Sbjct: 177 LSMGTMLAGMTPQEGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYRYDLTEEEAL 236

Query: 160 EIARKAMSIAADICVYTNHNIVLETLKVG 188
           E+ R+++  A     Y+   I L  +K  
Sbjct: 237 ELGRRSILAAMHRDAYSGGFINLYHVKEE 265


>gi|50423687|ref|XP_460428.1| DEHA2F01496p [Debaryomyces hansenii CBS767]
 gi|49656097|emb|CAG88735.1| DEHA2F01496p [Debaryomyces hansenii]
          Length = 282

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +  R  G +V+A D + + G  +      KV R+    ++   AG +AD      
Sbjct: 69  HGTTTMAFRFQGGIVVAVDSRATQGNWIASQTVNKVIRINPD-LLGTMAGGAADCQYWET 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   + M L           K    +     
Sbjct: 128 WLGTQCRLHELREKERISVAAASKILSNLVYEYKGMGLSMGTMICGYTKKEGPTIYYVDS 187

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S EE   + ++++  A     Y+  ++ L
Sbjct: 188 DGSRLKGEMFCVGSGQTFAYGVLDSEYRWDLSVEEALYLGKRSILAATHRDAYSGGSVNL 247


>gi|321470713|gb|EFX81688.1| hypothetical protein DAPPUDRAFT_303318 [Daphnia pulex]
          Length = 277

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 67/184 (36%), Gaps = 11/184 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G +V+A D + + GQ +   + +K+  +    ++   AG +AD      
Sbjct: 69  HGTTTLGFKYQGGIVLAVDSRATGGQYIGSGSVKKIIEINDF-LLGTMAGGAADCTYWER 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   + N + M L         DK    +     D
Sbjct: 128 VLSKQCRLYELRNKERISVAAASKLLVNMVYNYKGMGLSMGVMIAGWDKKGPGLYYVDND 187

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  V ++GSG  YA     +      S   A E+ R+A+  A      +   I + 
Sbjct: 188 GTRTPGQVFSVGSGSLYAYGVLDSGYRNDLSDEEAYELGRRAIYHATYRDASSGGIIRVY 247

Query: 184 TLKV 187
            +K 
Sbjct: 248 HIKS 251


>gi|332021182|gb|EGI61567.1| Proteasome subunit beta type-5 [Acromyrmex echinatior]
          Length = 286

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G +++A D + + GQ +  +  +K+  +    ++   AG +AD      
Sbjct: 73  HGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVEINDY-LLGTLAGGAADCVYWDR 131

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L ++   Y  +        A    +   + N + M L         DK    +     +
Sbjct: 132 VLARQCRMYELRNRERISIAAASKLLSNMIYNFKGMGLSIGMMLAGWDKRGPGLYYVDSE 191

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  V ++GSG  +A     +      +   A E+ R+A+  A     Y+   I +
Sbjct: 192 GTRTPGKVFSVGSGSVFAFGVLDSGYRWDLTDEQAYELGRRAIYHATHRDAYSGGIIRV 250


>gi|312372646|gb|EFR20567.1| hypothetical protein AND_19880 [Anopheles darlingi]
          Length = 257

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G V++A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 43  HGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVEINDY-LLGTLAGGAADCVYWDR 101

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    M   +   + M L         DK    +     +
Sbjct: 102 VLAKECRIYELRNKERISVAAASKIMSNIVYYYKGMGLSMGMMLAGYDKRGPQLYYIDSE 161

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  V ++GSG  YA     +      +   A+++ R+A+  A     Y+   + + 
Sbjct: 162 GTRTPGKVFSVGSGSIYAYGVLDSGYHWDLTDEEAQDLGRRAIYHATHRDAYSGGIVRVY 221

Query: 184 TLK 186
            +K
Sbjct: 222 HIK 224


>gi|156849167|ref|XP_001647464.1| hypothetical protein Kpol_1018p144 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118150|gb|EDO19606.1| hypothetical protein Kpol_1018p144 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 288

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD      
Sbjct: 74  HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWET 132

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   +   L           K    +     
Sbjct: 133 WLGSQCRLHELKEKSRISVAAASKILSNLVYQYKGAGLSMGTMICGYTKKEGPTIYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      + +E   + ++++  AA    Y+  +I L
Sbjct: 193 DGTRLKGDLFCVGSGQTFAYGVLDSNYKWDLTVDEALYLGKRSILAAAHRDAYSGGSINL 252


>gi|56753153|gb|AAW24786.1| SJCHGC05978 protein [Schistosoma japonicum]
 gi|226471270|emb|CAX70716.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
           japonicum]
 gi|226488126|emb|CAX75728.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
           japonicum]
 gi|226488128|emb|CAX75729.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
           japonicum]
 gi|226488130|emb|CAX75730.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
           japonicum]
          Length = 264

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +  G V++A D + + G  +     +K+  + K  ++   AG +AD     
Sbjct: 60  LHGTTTLAFKYSGGVIVATDSRATAGSYIASGTTKKIIEINKY-LLGTMAGGAADCQFWE 118

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             L K    +  +        A    +   + N + M L         DK    V     
Sbjct: 119 RVLAKHCRLFELRNKERISVAAASKLLANMVYNYKGMGLSIGTTIVGWDKNGPGVYYVDT 178

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           D       + ++GSG  YA     A    + S   A E+A++++  A      +   + L
Sbjct: 179 DGNRTPGNLFSVGSGSPYAYGVLDAGYKYEMSDEDAYELAKRSIFHATHRDAASGGFVNL 238


>gi|297661233|ref|XP_002809170.1| PREDICTED: proteasome subunit beta type-8-like isoform 1 [Pongo
           abelii]
          Length = 276

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIGALRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 180 GPGLYYVNEHGTRLSGNMFSTGSGNAYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|260947704|ref|XP_002618149.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
           42720]
 gi|238848021|gb|EEQ37485.1| proteasome component PRE2 precursor [Clavispora lusitaniae ATCC
           42720]
          Length = 282

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 64/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V      KV R+    ++   AG +AD      
Sbjct: 69  HGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVNKVIRINPF-LLGTMAGGAADCQYWET 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   + N + M L           K    +     
Sbjct: 128 WLGTQCRLHELREKERISVAAASKILGNLVYNYKGMGLSMGTMVCGYTKKEGPTIYYVDS 187

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S E+   + ++++  A     Y+  +I L
Sbjct: 188 DGTRLKGDLFCVGSGQTFAYGVLDSEYKWDLSVEDALYLGKRSILAATHRDAYSGGSINL 247


>gi|198438343|ref|XP_002132107.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
           type, 5 [Ciona intestinalis]
          Length = 270

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 66/188 (35%), Gaps = 12/188 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           D    +K  H TT L  +    VV+A D + + G  +     +KV  +    ++   AG 
Sbjct: 56  DSDVHIKFNHGTTTLAFKFQHGVVVATDSRATAGDYIASQTVKKVIEINPY-LLGTMAGG 114

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L K+   Y  +        A    +   + N + M L         DK  
Sbjct: 115 AADCSFWERVLAKQCRVYELRNKERISVAAASKVLANMVYNYKGMGLSMGTMICGWDKRG 174

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICV 174
             +     D       + A+GSG +YA     A  S       A  + ++A+  A     
Sbjct: 175 PGLYYVDSDGQRLNGSMFAVGSGATYAYGVMDAGYSNDMCVEDALALGKRAIYHATHRDA 234

Query: 175 YTNHNIVL 182
           Y+   + L
Sbjct: 235 YSGGFVNL 242


>gi|118781366|ref|XP_559226.2| AGAP010718-PA [Anopheles gambiae str. PEST]
 gi|116130136|gb|EAL41084.2| AGAP010718-PA [Anopheles gambiae str. PEST]
          Length = 284

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G V++A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFRFQGGVILAVDSRATGGQFIGSQTMKKIVEINDY-LLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    M   +   + M L         DK    +     +
Sbjct: 131 VLAKECRIYELRNKERISVAAASKIMSNIVYYYKGMGLSMGMMLAGYDKRGPQLYYIDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  V ++GSG  YA     +      +   A+++ R+A+  A     Y+   + + 
Sbjct: 191 GTRTPGKVFSVGSGSIYAYGVLDSGYHWDLTDEEAQDLGRRAIYHATHRDAYSGGIVRVY 250

Query: 184 TLK 186
            +K
Sbjct: 251 HIK 253


>gi|115398830|ref|XP_001215004.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
 gi|114191887|gb|EAU33587.1| proteasome component PRE2 precursor [Aspergillus terreus NIH2624]
          Length = 296

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 25/209 (11%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  + + +       
Sbjct: 57  SNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKPT 116

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD    L  L ++   +  +  R     A    +       +   
Sbjct: 117 DAPTPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYG 176

Query: 111 LIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AE 159
           L           +    +     D       +  +GSG ++A     A      +   A 
Sbjct: 177 LSMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEAL 236

Query: 160 EIARKAMSIAADICVYTNHNIVLETLKVG 188
           E+ R+++  A     Y+   I L  +K  
Sbjct: 237 ELGRRSILAAMHRDAYSGGFINLYHVKEE 265


>gi|320590110|gb|EFX02555.1| proteasome component [Grosmannia clavigera kw1407]
          Length = 284

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 71/196 (36%), Gaps = 13/196 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 58  SNPTCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIEI-NSCLLGTMAG 116

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
            +AD    L  L ++   +  +  R     A    +   + + + M L           +
Sbjct: 117 GAADCQYWLAWLGRECRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTPE 176

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A  S       A E+ R+++  A   
Sbjct: 177 EGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYSYDLAADDALELGRRSILAATHR 236

Query: 173 CVYTNHNIVLETLKVG 188
             ++   I L  +K  
Sbjct: 237 DAFSGGFINLYHVKED 252


>gi|311260174|ref|XP_001924154.2| PREDICTED: proteasome subunit beta type-8 [Sus scrofa]
 gi|147225184|emb|CAN13316.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional protease 7) [Sus scrofa]
          Length = 276

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
           S+AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 SAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +       + + GSG +YA     +      S EE   + R+A+  A    
Sbjct: 180 GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|149627581|ref|XP_001509497.1| PREDICTED: similar to proteasome [Ornithorhynchus anatinus]
          Length = 263

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRVSGVTFSVGSGSVYAYGIMDRGYSHDLEVEAAYDLARRAIYQATYRDAYSGGVVNL 235


>gi|308811755|ref|XP_003083185.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 (ISS)
           [Ostreococcus tauri]
 gi|116055064|emb|CAL57460.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3 (ISS)
           [Ostreococcus tauri]
          Length = 294

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L    +  +VIA D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 62  HGTTTLGFIFEHGIVIAVDSRASQGPYISSQTVKKVIEINPF-LLGTMAGGAADCQFWQR 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L  +   +  +  +     A    +   L + +        MI   D     +     +
Sbjct: 121 NLGIQCRLHELENGKRITVRAASKLLANTLYSYKGRGLSMGTMIAGWDLNGPGLYYVDSE 180

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +    ++GSG  +A            S   A E+ R+A+  A     ++   + +
Sbjct: 181 GTRLKGQRFSVGSGSLFAYGVLDQGYRWDLSVKEACELGRRAIYHATFRDAFSGGTVSV 239


>gi|195454741|ref|XP_002074381.1| GK10550 [Drosophila willistoni]
 gi|194170466|gb|EDW85367.1| GK10550 [Drosophila willistoni]
          Length = 272

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 78/201 (38%), Gaps = 16/201 (7%)

Query: 1   MVVMGDKHYA--VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           ++++ +      +    TTI+ +     V++  D + + G  V   N  K+  L +    
Sbjct: 23  LILLQEGFKPPTMTKTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHYLAQNIYC 82

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
            G AG++AD     + +  +LE +     R    +A +  + + L   +  I  A     
Sbjct: 83  CG-AGTAADTEMTTDLISSQLELHRLNTNRQVRVVAANMMLKQMLFRYQGHISAALVLGG 141

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
            DKT   + +        +     +GSG   A+S   +      S E+   + R A  IA
Sbjct: 142 VDKTGPHLYSIHPHGSSDKLPYATMGSGSLAAMSVFESRWKPNMSEEDGKLLVRDA--IA 199

Query: 170 ADI--CVYTNHNIVLETLKVG 188
           + I   + +  N+ L  ++  
Sbjct: 200 SGIFNDLGSGSNVDLCVIREN 220


>gi|2654058|gb|AAB87679.1| LMP7 [Danio rerio]
 gi|29561859|emb|CAD87792.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional protease 7) [Danio rerio]
 gi|94732364|emb|CAK04955.1| proteasome (prosome, macropain) subunit, beta type, 8 [Danio rerio]
 gi|190338169|gb|AAI62902.1| Psmb8 protein [Danio rerio]
 gi|190339582|gb|AAI62883.1| Psmb8 protein [Danio rerio]
          Length = 271

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +    A KV  +    ++   +GS+AD      
Sbjct: 66  HGTTTLAFKFRHGVIVAVDSRASAGKYIASKEANKVIEINPY-LLGTMSGSAADCQYWER 124

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         DK    +     +
Sbjct: 125 LLAKECRLYKLRNKQRISVSAASKLLSNMMLGYRGMGLSMGSMICGWDKQGPGLYYVDDN 184

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+ R+ ++ A     Y+   + L
Sbjct: 185 GTRLSGRMFSTGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVNL 243


>gi|169769717|ref|XP_001819328.1| proteasome component PRE2 [Aspergillus oryzae RIB40]
 gi|238487964|ref|XP_002375220.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
 gi|83767187|dbj|BAE57326.1| unnamed protein product [Aspergillus oryzae]
 gi|220700099|gb|EED56438.1| proteasome component Pre2, putative [Aspergillus flavus NRRL3357]
          Length = 296

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 25/209 (11%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  + + +       
Sbjct: 57  SNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKAN 116

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD    L  L ++   +  +  R     A    +       +   
Sbjct: 117 NAPTPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYG 176

Query: 111 LIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AE 159
           L           +    +     D       +  +GSG ++A     A      +   A 
Sbjct: 177 LSMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEAL 236

Query: 160 EIARKAMSIAADICVYTNHNIVLETLKVG 188
           E+ R+++  A     Y+   I L  +K  
Sbjct: 237 ELGRRSILAAMHRDAYSGGFINLYHVKEE 265


>gi|58268812|ref|XP_571562.1| proteasome component pts1 [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134113116|ref|XP_774834.1| hypothetical protein CNBF2630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257480|gb|EAL20187.1| hypothetical protein CNBF2630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227797|gb|AAW44255.1| proteasome component pts1, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 301

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD      
Sbjct: 81  HGTTTLAFRFKGGIIVAVDSRATAGSYVASGTVKKVIEI-NKFLLGTMAGGAADCQYWET 139

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +  +        A    +   +   + M L         DKT   +     D
Sbjct: 140 YLGMQCRLHELRNKERISVAAASKILSNIVYQYKGMGLSMGTMVCGWDKTGPCIFYVDDD 199

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
               +  + ++GSG ++A            S   A+E+ R+++  A     ++ +
Sbjct: 200 GQRLKGDLFSVGSGSTFAYGVLDQGYKWDLSDEEAQELGRRSIVAAGHRDAFSGN 254


>gi|59275968|dbj|BAD89554.1| proteasome subunit [Oncorhynchus mykiss]
          Length = 267

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +    A KV  +    ++   +GS+AD      
Sbjct: 62  HGTTTLAFKFRHGVIVAVDSRASAGSYIASKEANKVIEINPY-LLGTMSGSAADCQYWER 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         D     +     +
Sbjct: 121 LLAKECRLYKLRNKQRISVSAASKLLCNMMLGYRGMGLSMGSMIVGWDNKGPGLYYVDDN 180

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+ R+ ++ A     Y+   + L
Sbjct: 181 ATRLSGRMFSTGCGSSYAYGVMDSGYREDMTVEEAYELGRRGITHATHRDAYSGGVVNL 239


>gi|219567032|dbj|BAH05034.1| proteasome subunit, beta type 8 [Oryzias dancena]
 gi|224473817|gb|ACN49158.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
          Length = 273

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 68  HGTTTLAFKFKHGVIVAVDSRASAGNYISTGEYNKVIEINPY-LLGTMSGSAADCKYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    V     +
Sbjct: 127 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGVYYVDDN 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG SYA     +      +   A E+ R+ ++ A     Y+   + L 
Sbjct: 187 GTRLSGRMFSTGSGNSYAYGVLDSGYKEDMTIEEAYELGRRGIAHATHRDSYSGGVVNLY 246

Query: 184 TLKVG 188
            +K  
Sbjct: 247 HIKED 251


>gi|149732106|ref|XP_001496055.1| PREDICTED: similar to proteasome subunit beta type 8 [Equus
           caballus]
          Length = 276

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+ +  ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 61  GEGNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +       + + GSG SYA     +      S EE   + R+A+  A    
Sbjct: 180 GPGLYYVDENGTRLSGNMFSTGSGNSYAYGVMDSGYRNNLSIEEAYDLGRRAIVHATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|108860908|sp|Q3T112|PSB8_BOVIN RecName: Full=Proteasome subunit beta type-8; AltName:
           Full=Proteasome subunit beta-5i; Flags: Precursor
 gi|63169161|gb|AAY34697.1| proteasome subunit beta type 8 [Bos taurus]
 gi|296474549|gb|DAA16664.1| proteasome subunit beta type-8 precursor [Bos taurus]
          Length = 276

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 65/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+    ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 61  GESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYIATLKVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCLYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +       + + GSG S+A     +      S EE   + R+A+  A    
Sbjct: 180 GPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|198285521|gb|ACH85299.1| proteasome (prosome, macropain) subunit beta type 5 [Salmo salar]
          Length = 269

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 12/181 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 62  LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 120

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DKT   +     
Sbjct: 121 RLLARQCRVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGPGLYYVDS 180

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEE---IARKAMSIAADICVYTNHNIV 181
           +       + A+GSG  YA     + +     + EE   + R+A+  A     Y+   + 
Sbjct: 181 EGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDAYSGGQVN 240

Query: 182 L 182
           L
Sbjct: 241 L 241


>gi|19114737|ref|NP_593825.1| 20S proteasome component beta 5 [Schizosaccharomyces pombe 972h-]
 gi|3123252|sp|P30655|PSB5_SCHPO RecName: Full=Proteasome subunit beta type-5; AltName:
           Full=Macropain subunit pts1; AltName:
           Full=Multicatalytic endopeptidase complex subunit pts1;
           AltName: Full=Proteasome component pts1; Flags:
           Precursor
 gi|4490651|emb|CAB11483.1| 20S proteasome component beta 5 [Schizosaccharomyces pombe]
          Length = 272

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 12/194 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           +KH  +KM H TT L  R    +V+  D + S G  +     +KV  +    ++   AG 
Sbjct: 51  NKHCLIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPY-LLGTLAGG 109

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL----- 119
           +AD       L  +   +  +        A    +     + +   L     +       
Sbjct: 110 AADCQFWETVLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGG 169

Query: 120 --VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     D    +  + ++GSG ++A     +      S +E   +A++++  A     
Sbjct: 170 TALYYIDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDA 229

Query: 175 YTNHNIVLETLKVG 188
           Y+  ++ L  +   
Sbjct: 230 YSGGSVNLYHIDEN 243


>gi|18977776|ref|NP_579133.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
           subunit) [Pyrococcus furiosus DSM 3638]
 gi|25453238|sp|Q8U125|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
           subunit) [Pyrococcus furiosus DSM 3638]
          Length = 206

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 10/190 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H   K+  TT + +     VV+A D + SLG  +   N  K+ ++ +   IAG AG   D
Sbjct: 3   HLKEKLKGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAG-AGDVGD 61

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRM------DKYLRNLEAMILIADKTITLVI 121
              L+  L+ +   Y + + +     A    +       KY   L   ++        + 
Sbjct: 62  ILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEKPRLF 121

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
           +        E+   A GSG  +A S   +    + S  +   +A KA+++A    V+T  
Sbjct: 122 SVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGD 181

Query: 179 NIVLETLKVG 188
            +++ T+   
Sbjct: 182 GLLVVTITKD 191


>gi|221220194|gb|ACM08758.1| Proteasome subunit beta type-5 precursor [Salmo salar]
          Length = 270

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 12/181 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 63  LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 121

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DKT   +     
Sbjct: 122 RLLARQCRVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGPGLYYVDS 181

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEE---IARKAMSIAADICVYTNHNIV 181
           +       + A+GSG  YA     + +     + EE   + R+A+  A     Y+   + 
Sbjct: 182 EGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDAYSGGQVN 241

Query: 182 L 182
           L
Sbjct: 242 L 242


>gi|1405325|dbj|BAA10933.1| LMP7 of nurse shark [Ginglymostoma cirratum]
          Length = 274

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +     +KV  +    ++   +GS+AD      
Sbjct: 69  HGTTTLAFKFQHGVMVAVDSRASAGSYISTQMFKKVIEINPY-LLGTMSGSAADCVFWER 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +   + M L         D+    +      
Sbjct: 128 MLAKQCRIYKLRNKKRISVSAASKLLANMVSEYKGMGLSMGTMICGWDEKGPGLYYVNDG 187

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
            +     + + GSG SYA     +      +   A ++A++A+  A     Y+   + +
Sbjct: 188 GMRLSGSMFSTGSGCSYAYGVMDSGYRYDLTVKEAYDLAQRAIYHATHRDAYSGGTVNM 246


>gi|195582278|ref|XP_002080955.1| GD10758 [Drosophila simulans]
 gi|194192964|gb|EDX06540.1| GD10758 [Drosophila simulans]
          Length = 282

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + G  +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEI-NQFMLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                  + ++GSG  YA     +          A+E+ R+A+  A     Y+   I + 
Sbjct: 191 GSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELGRRAIYHATFRDAYSGGIIRVY 250

Query: 184 TLKVG 188
            +K  
Sbjct: 251 HIKED 255


>gi|12845889|dbj|BAB26942.1| unnamed protein product [Mus musculus]
          Length = 264

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +A+     
Sbjct: 57  LHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAANCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 176 EGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNL 235


>gi|21355573|ref|NP_652014.1| proteasome beta5 subunit, isoform A [Drosophila melanogaster]
 gi|24652553|ref|NP_724974.1| proteasome beta5 subunit, isoform B [Drosophila melanogaster]
 gi|7303698|gb|AAF58748.1| proteasome beta5 subunit, isoform A [Drosophila melanogaster]
 gi|17862098|gb|AAL39526.1| LD08717p [Drosophila melanogaster]
 gi|21627516|gb|AAM68751.1| proteasome beta5 subunit, isoform B [Drosophila melanogaster]
 gi|220942740|gb|ACL83913.1| Prosbeta5-PA [synthetic construct]
 gi|220952918|gb|ACL89002.1| Prosbeta5-PA [synthetic construct]
          Length = 282

 Score =  132 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + G  +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEI-NQFMLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                  + ++GSG  YA     +          A+E+ R+A+  A     Y+   I + 
Sbjct: 191 GSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVY 250

Query: 184 TLKVG 188
            +K  
Sbjct: 251 HIKED 255


>gi|223646804|gb|ACN10160.1| Proteasome subunit beta type-8 precursor [Salmo salar]
 gi|223672663|gb|ACN12513.1| Proteasome subunit beta type-8 precursor [Salmo salar]
          Length = 303

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  V     +KV  +    ++   +GS+AD      
Sbjct: 98  HGTTTLAFKFQHGVMVAVDSRASAGSYVSTQMFKKVIEINPF-LLGTMSGSAADCVYWER 156

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   + N   M L         DK    +     +
Sbjct: 157 VLAKECRIYNLRNKERISVSAASKLLANMVVNYRGMGLSMGTMICGWDKKGPGLYYVDDN 216

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
            L     + + GSG +YA     +      S   A ++A++A+  A     Y+   + +
Sbjct: 217 GLRLCGNMFSTGSGNTYAYGVMDSGYRYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNM 275


>gi|47522620|ref|NP_999100.1| proteasome subunit beta type-8 [Sus scrofa]
 gi|4545092|gb|AAD22390.1|AF059493_1 proteasome subunit LMP7 [Sus scrofa]
          Length = 260

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 45  GERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPY-LLGTMSG 103

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 104 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMYQYRGMGLSMGSMICGWDKK 163

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +       + + GSG +YA     +      S EE   + R+A+  A    
Sbjct: 164 GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 223

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 224 SYSGGVVNM 232


>gi|328787761|ref|XP_394680.3| PREDICTED: proteasome subunit beta type-5-like [Apis mellifera]
          Length = 282

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 72/191 (37%), Gaps = 12/191 (6%)

Query: 7   KHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           KH  ++  H TT L  +  G +++A D + + GQ +  +  +K+  +    ++   AG +
Sbjct: 65  KHLKIRFDHGTTTLGFQYQGGIILAVDSRATGGQFIGSSTMKKIVEINDY-LLGTLAGGA 123

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD       L K+   Y  +        A    +   + N + M L         DK   
Sbjct: 124 ADCVYWDRVLAKQCRTYELRNRERISIAAASKLLSNMIYNYKGMGLSIGMMLAGWDKRGP 183

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +     +       V ++GSG  YA     +      S EE   + ++++  A     Y
Sbjct: 184 SLYYVDSEGARTPGKVFSVGSGSIYAFGTLDSGYRWDLSDEEAYQLGKRSIYHATHRDAY 243

Query: 176 TNHNIVLETLK 186
           +   + +  +K
Sbjct: 244 SGGIVRVYHIK 254


>gi|62955555|ref|NP_001017791.1| proteasome subunit beta type 8 [Danio rerio]
 gi|62531305|gb|AAH92889.1| Zgc:110346 [Danio rerio]
 gi|182890838|gb|AAI65541.1| Zgc:110346 [Danio rerio]
          Length = 277

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           GD    ++  H TT L  +    V++A D + S G  +   + +KV  +    ++   +G
Sbjct: 61  GDSDIKIEFLHGTTTLAFKFQHGVMVAVDSRASAGSYIDTKDFKKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
           ++AD      RL K+   Y  +        A    +   +     M L         D+ 
Sbjct: 120 NAADCVYWERRLAKECRIYKLRNKTRISVAAASKLLANMVAEYRGMGLSMGTMVCGWDQR 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +             + + GSG +YA     +      +   A ++A +A+  A    
Sbjct: 180 GPGLYYVSSSGTRLAGDMFSTGSGCNYAYGVMDSGHRWDLTVPEAYDLAERAIYHATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 AYSGGVVNM 248


>gi|221219204|gb|ACM08263.1| Proteasome subunit beta type-5 precursor [Salmo salar]
          Length = 270

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 12/181 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 63  LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 121

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DKT   +     
Sbjct: 122 RLLARQCRVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGPGLYYVDS 181

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEE---IARKAMSIAADICVYTNHNIV 181
           +       + A+GSG  YA     + +     + EE   + R+A+  A     Y+   + 
Sbjct: 182 EGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDAYSGGQVN 241

Query: 182 L 182
           L
Sbjct: 242 L 242


>gi|6715438|gb|AAF26416.1|AF217726_1 20S proteasome beta5 subunit [Drosophila melanogaster]
          Length = 282

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + G  +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEI-NQFMLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                  + ++GSG  YA     +          A+E+ R+A+  A     Y+   I + 
Sbjct: 191 GSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVY 250

Query: 184 TLKVG 188
            +K  
Sbjct: 251 HIKED 255


>gi|195333237|ref|XP_002033298.1| GM21240 [Drosophila sechellia]
 gi|194125268|gb|EDW47311.1| GM21240 [Drosophila sechellia]
          Length = 282

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + G  +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEI-NQFMLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                  + ++GSG  YA     +          A+E+ R+A+  A     Y+   I + 
Sbjct: 191 GSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELGRRAIYHATFRDAYSGGIIRVY 250

Query: 184 TLKVG 188
            +K  
Sbjct: 251 HIKED 255


>gi|220881|dbj|BAA01572.1| proteasome subunit RC1 [Rattus sp.]
          Length = 208

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +      KV  +    ++   +G +AD      
Sbjct: 3   HGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPY-LLGTMSGCAADCQYWER 61

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 62  LLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDN 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      S EE   +AR+A+  A     Y+   + + 
Sbjct: 122 GTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMY 181

Query: 184 TLKVG 188
            +K  
Sbjct: 182 HMKKD 186


>gi|225192993|dbj|BAH29625.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  131 bits (330), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|227937349|gb|ACP43315.1| 20S proteasome beta subunit 5 [Citrus maxima]
          Length = 272

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 59/175 (33%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 54  KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
               +    ++GSG  YA     +      S   A E+AR+A+  A      +  
Sbjct: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIEEAAELARRAIYHATFRDAASGG 227


>gi|195429280|ref|XP_002062691.1| GK19557 [Drosophila willistoni]
 gi|194158776|gb|EDW73677.1| GK19557 [Drosophila willistoni]
          Length = 362

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 69/194 (35%), Gaps = 14/194 (7%)

Query: 8   HYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           H  ++M   H TT L       V++  D + + GQ +     +K+  L    ++   AG 
Sbjct: 61  HCNIQMDFAHGTTTLGFIFRNGVILCADSRATSGQYIGSQTMKKIVELNDY-MLGTLAGG 119

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L ++   +  +  R         RM       + M L+        D   
Sbjct: 120 AADCVYWDRVLARECRLHELRFKRRMTVDTAARRMCNISAEYKGMGLVMGMMLAGYDNDG 179

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICV 174
             +I    + +     V ++GSG  YAL           T   A ++AR+A+  A     
Sbjct: 180 PKLIYVDSEGMRSHANVFSVGSGSPYALGVLDTGYKWDITDQEAYDLARRAIYHATSKDA 239

Query: 175 YTNHNIVLETLKVG 188
           Y+   + L  +   
Sbjct: 240 YSGGIVRLYHITEK 253


>gi|315518887|dbj|BAJ51776.1| proteasome subunit, beta type 8 [Oryzias javanicus]
          Length = 238

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFKHGVIVAVDSRASAGNYISTGEYNKVIEINPY-LLGTMSGSAADCKYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    V     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGVYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG SYA     +      +   A E+ R+ ++ A     Y+   + L 
Sbjct: 152 GTRLSGRMFSTGSGNSYAYGVLDSGYKEDMTVEEAYELGRRGIAHATHRDSYSGGVVNLY 211

Query: 184 TLKVG 188
            +K  
Sbjct: 212 HIKED 216


>gi|225193023|dbj|BAH29645.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193032|dbj|BAH29651.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193074|dbj|BAH29679.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|225193041|dbj|BAH29657.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|3914430|sp|O24361|PSB5_SPIOL RecName: Full=Proteasome subunit beta type-5; AltName: Full=20S
           proteasome subunit E; AltName: Full=Proteasome epsilon
           chain; Flags: Precursor
 gi|2285800|dbj|BAA21650.1| 26S proteasome beta subunit [Spinacia oleracea]
          Length = 272

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 54  KGTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L N   M L         D+T   +     +
Sbjct: 113 NLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSE 172

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +    ++GSG  YA            +   A E+AR+A+  A      +   + +
Sbjct: 173 GGRLKGMRFSVGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSV 231


>gi|94966773|ref|NP_001035570.1| proteasome subunit beta type-8 precursor [Bos taurus]
 gi|74267608|gb|AAI02171.1| Proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Bos taurus]
          Length = 276

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+    ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 61  GESKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGNYIDTLKVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 120 CAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG S+A     +      S EE   + R+A+  A    
Sbjct: 180 GPGLYYVNDSGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|68070411|ref|XP_677117.1| heat shock protein hslv [Plasmodium berghei strain ANKA]
 gi|70936596|ref|XP_739221.1| heat shock protein hslv [Plasmodium chabaudi chabaudi]
 gi|56497106|emb|CAH97956.1| heat shock protein hslv, putative [Plasmodium berghei]
 gi|56516054|emb|CAH79397.1| heat shock protein hslv, putative [Plasmodium chabaudi chabaudi]
          Length = 158

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 91/158 (57%), Positives = 120/158 (75%), Gaps = 2/158 (1%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           + GDG VS G  ++K NA+K+RRL    I+ GFAG++AD FTLL++ E K+++YPNQLLR
Sbjct: 2   LIGDGMVSQGTMIVKGNAKKIRRLKDN-ILMGFAGATADCFTLLDKFETKIDEYPNQLLR 60

Query: 89  SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
           S VELAK WR D+YLR+LEA++++ADK   L +TG GDVLEP   V+  GSGG YA++AA
Sbjct: 61  SCVELAKLWRTDRYLRHLEAVLIVADKDTLLEVTGNGDVLEPSGNVLGTGSGGPYAIAAA 120

Query: 149 RALMS-TQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           RAL      SA++IA KAM+IAAD+C +TNHN + ETL
Sbjct: 121 RALYDIENLSAKDIAYKAMNIAADMCCHTNHNFICETL 158


>gi|259089301|ref|NP_001158688.1| Proteasome subunit beta type 8 [Oncorhynchus mykiss]
 gi|225705888|gb|ACO08790.1| Proteasome subunit beta type 8 precursor [Oncorhynchus mykiss]
          Length = 276

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  V     +KV  +    ++   +GS+AD      
Sbjct: 71  HGTTTLAFKFQHGVMVAVDSRASAGSYVSTQMFKKVIEINPF-LLGTMSGSAADCVYWER 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   + N   M L         DK    +     +
Sbjct: 130 VLAKECRIYKLRNKERISVSAASKLLANMVVNYRGMGLSMGTMICGWDKKGPGLYYVDDN 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
            L     + + GSG +YA     +      S   A ++A++A+  A     Y+   + +
Sbjct: 190 GLRLCGNMFSTGSGNTYAYGVMDSGYRYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNM 248


>gi|225192987|dbj|BAH29621.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193008|dbj|BAH29635.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 251

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 69  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 128 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 187

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 188 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 246


>gi|255948078|ref|XP_002564806.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591823|emb|CAP98078.1| Pc22g07900 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 296

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 25/209 (11%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            +    +K+ H TT L  R  G +++  D + + G  +     +KV  + + +       
Sbjct: 57  SNPSCPIKLAHGTTTLAFRFQGGIIVCTDSRATAGNWIASQTVKKVIPVSRLSRGEDKKT 116

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD    L  L ++   +  +  R     A    +       +   
Sbjct: 117 NEPTPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGYG 176

Query: 111 LIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-- 160
           L           +    +     D       +  +GSG ++A     A    + + EE  
Sbjct: 177 LSMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYKYELTEEEAL 236

Query: 161 -IARKAMSIAADICVYTNHNIVLETLKVG 188
            + R+A+  A     Y+   I L  +K  
Sbjct: 237 NLGRRAILAAMHRDAYSGGFINLYHVKEE 265


>gi|786582|gb|AAB33092.1| proteasome subunit MB1 [Homo sapiens]
          Length = 215

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG + D     
Sbjct: 9   LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAGDCSFWE 67

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 68  RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGSMICGWDKRGPGLYYVDS 127

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 128 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 187


>gi|225708502|gb|ACO10097.1| Proteasome subunit beta type 8 precursor [Osmerus mordax]
          Length = 275

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +    A KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGSYIASKEANKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L K+   Y  +  +     A    +   ++           MI+  D     +     +
Sbjct: 129 LLAKECRLYKLRNKQRISVSAASKLLSNMMQGYRGMGLSMGSMIIGWDNKGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                    + G G SYA     +      +   A E+ R+ +  A     Y+   + L
Sbjct: 189 GTRLSGRTFSTGCGSSYAYGVVDSGYQEDMTVEEAYELGRRGIVHATHRDAYSGGVVNL 247


>gi|212533187|ref|XP_002146750.1| proteasome component Pre2, putative [Penicillium marneffei ATCC
           18224]
 gi|210072114|gb|EEA26203.1| proteasome component Pre2, putative [Penicillium marneffei ATCC
           18224]
          Length = 296

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 3   VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
            M D H      +K+ H TT L  R    +++A D + + G  +     +KV  + + N+
Sbjct: 51  AMTDDHSNPSAPIKLAHGTTTLAFRFQHGIIVATDSRATAGNWIASQTVKKVIPVSRLNM 110

Query: 58  -------------IAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR 104
                        +   AG++AD    L  L ++   +  +  R     A    +     
Sbjct: 111 ALDKNHNAPVPGLLGTMAGTAADCQYWLRYLAEQCTLHELRHKRRITVAAASKILANLTY 170

Query: 105 NLEAMILIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
           + ++M L           +    +     D       +  +GSG ++A     A      
Sbjct: 171 SYKSMGLGMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDAEYRYDL 230

Query: 157 S---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           S   A E+ R+++  A     Y+   I L  +K  
Sbjct: 231 STDEALELGRRSILAATHRDAYSGGYINLYHVKEE 265


>gi|225192969|dbj|BAH29689.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225192972|dbj|BAH29687.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225192975|dbj|BAH29685.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225192996|dbj|BAH29627.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193026|dbj|BAH29647.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193035|dbj|BAH29653.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193044|dbj|BAH29659.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193047|dbj|BAH29661.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193062|dbj|BAH29671.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|296785033|ref|NP_001171881.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|18157533|dbj|BAB83848.1| PSMB8-A [Oryzias latipes]
 gi|295901497|dbj|BAJ07261.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|295901536|dbj|BAJ07285.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|295901538|dbj|BAJ07286.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 275

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|12003011|gb|AAG43439.1|AF184937_1 low molecular mass protein 7 [Salmo salar]
          Length = 267

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       V++A D + S G  +    A KV  +    ++   +GS+ D      
Sbjct: 62  HGTTTLAFTFRHGVIVAVDSRASAGSYIASKEANKVIEINPY-LLGTMSGSAGDCQYWER 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +            MI+  D     +     +
Sbjct: 121 LLAKECRLYKLRNKQRISVSAASKLLCNMMLGYRGMGLSMGSMIIGWDNKGPGLYYVDDN 180

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+ R+ ++ A     Y+   + L
Sbjct: 181 ATRLSGRMFSTGCGSSYAYGVVDSGYREDMTVEEAYELGRRGITHATHRDAYSGGVVNL 239


>gi|185133011|ref|NP_001117007.1| proteasome subunit beta type 7b [Salmo salar]
 gi|12003013|gb|AAG43440.1|AF184938_1 low molecular mass protein 7 [Salmo salar]
 gi|148362121|gb|ABQ59648.1| PSMB8 [Salmo salar]
 gi|209738090|gb|ACI69914.1| Proteasome subunit beta type-8 precursor [Salmo salar]
 gi|223647058|gb|ACN10287.1| Proteasome subunit beta type-8 precursor [Salmo salar]
 gi|223672927|gb|ACN12645.1| Proteasome subunit beta type-8 precursor [Salmo salar]
 gi|262189354|gb|ACY30372.1| PSMB8 [Salmo salar]
          Length = 267

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       V++A D + S G  +    A KV  +    ++   +GS+AD      
Sbjct: 62  HGTTTLAFTFRHGVIVAVDSRASAGSYIASKEANKVIEINPY-LLGTMSGSAADCQYWER 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +            MI+  D     +     +
Sbjct: 121 LLAKECRLYKLRNKQRISVSAASKLLCNMMLGYRGMGLSMGSMIIGWDNKGPGLYYVDDN 180

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+ R+ ++ A     Y+   + L
Sbjct: 181 ATRLSGRMFSTGCGSSYAYGVVDSGYREDMTVEEAYELGRRGITHATHRDAYSGGVVNL 239


>gi|639871|dbj|BAA08204.1| proteasome subunit RCX [Rattus rattus]
          Length = 208

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 2   LHGTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 61  RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 120

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 121 EGNRISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNL 180


>gi|50546901|ref|XP_500920.1| YALI0B15224p [Yarrowia lipolytica]
 gi|49646786|emb|CAG83171.1| YALI0B15224p [Yarrowia lipolytica]
          Length = 286

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 65/180 (36%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +V+A D + + G  V      KV R+    ++   AG +AD      
Sbjct: 67  HGTTTLAFRFKGGIVVAVDSRATAGNWVASQTVNKVIRINPF-LLGTMAGGAADCQYWET 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   Y  +  +     A    +   + + + M L           +    +     
Sbjct: 126 WLGGQCRLYELREKQRISVAAASKILSNLVYSYKGMGLSMGTMVCGYTAREGPTIYYVDS 185

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     A      + EE   + ++++  A     ++  ++ L
Sbjct: 186 DGTRLKGDLFCVGSGQTFAYGVLDATYKWDLTVEEALALGKRSILAATHRDAFSGGSVNL 245


>gi|332159619|ref|YP_004424898.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
 gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
          Length = 204

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 10/186 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K   TT + +     VV+A D + SLG  V   N  K+ ++ +   IAG AG   D   L
Sbjct: 4   KFKGTTTVGIVCKDGVVLAADRRASLGNIVYARNVTKIHKIDEHLAIAG-AGDVGDILNL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRM------DKYLRNLEAMILIADKTITLVITGMG 125
           +  L  + + Y  Q  R     A    +       KY   +   ++        + +   
Sbjct: 63  VRLLRAEAKLYYAQFGREMSARALATLLANILNGYKYFPYMAWFLVGGYDEKARLYSVDA 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                E+  MA GSG  +A S   A  S   + +E   +A KA++ A    V++   I++
Sbjct: 123 VGGITEDKYMAAGSGMEFAYSILDAEYSDDITVKEGVKLAVKAINTAIKRDVFSGDGILV 182

Query: 183 ETLKVG 188
            T+   
Sbjct: 183 VTITKE 188


>gi|225192949|dbj|BAH29699.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|209732230|gb|ACI66984.1| Proteasome subunit beta type-8 precursor [Salmo salar]
          Length = 276

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  V     +KV  +    ++   +GS+AD      
Sbjct: 71  HGTTTLAFKFQHGVMVAVDSRASAGSYVSTQMFKKVIEINPF-LLGTMSGSAADCVYWER 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   + N   M L         DK    +     +
Sbjct: 130 VLAKECRIYNLRNKERISVSAASKLLANMVVNYRGMGLSMGTMICGWDKKGPGLYYVDDN 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
            L     + + GSG +YA     +      S   A ++A++A+  A     Y+   + +
Sbjct: 190 GLRLCGNMFSTGSGNTYAYGVMDSGYRYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNM 248


>gi|219567024|dbj|BAH05030.1| proteasome subunit, beta type 8 [Oryzias minutillus]
          Length = 275

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S GQ +   N  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGQYLASNNVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNSQRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|327289964|ref|XP_003229694.1| PREDICTED: proteasome subunit beta type-8-like [Anolis
           carolinensis]
          Length = 230

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 63/188 (33%), Gaps = 11/188 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            D H     H TT L       V++A D + S G  +      KV  +    ++   +G 
Sbjct: 16  ADGHRIELAHGTTTLAFTFQHGVIVATDSRASAGNYIATLLCNKVIEINPY-LLGTMSGC 74

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTI 117
           +AD       L K+   Y  +        A    +   L     M L         DK  
Sbjct: 75  AADCQYWERLLAKQCRLYYLRNKERISVSAASKLLANMLCEYRGMGLSVGSMVCGWDKKG 134

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     + +     + + GSG +YA     +      + EE   + RKA+S A     
Sbjct: 135 PGLYYIDDNGVRLSGPLFSTGSGNTYAYGVLDSGHRPDLTVEEAYDLGRKAISYATHRDA 194

Query: 175 YTNHNIVL 182
           Y+   + +
Sbjct: 195 YSGGVVNM 202


>gi|219567056|dbj|BAH05046.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
 gi|219567060|dbj|BAH05048.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
          Length = 275

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|209732606|gb|ACI67172.1| Proteasome subunit beta type-5 precursor [Salmo salar]
 gi|303661532|gb|ADM16042.1| Proteasome subunit beta type-5 precursor [Salmo salar]
          Length = 270

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 12/181 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 63  LHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 121

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DKT   +     
Sbjct: 122 RLLARQCRVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGPGLYYVDS 181

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEE---IARKAMSIAADICVYTNHNIV 181
           +       + A+GSG  YA     + +     + EE   + R+A+  A     Y+   + 
Sbjct: 182 EGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTMEEACDLGRRAIYQATYRDAYSGGQVN 241

Query: 182 L 182
           L
Sbjct: 242 L 242


>gi|195129621|ref|XP_002009254.1| GI11352 [Drosophila mojavensis]
 gi|193920863|gb|EDW19730.1| GI11352 [Drosophila mojavensis]
          Length = 270

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 71/189 (37%), Gaps = 14/189 (7%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TTI+ +     V++  D + + G  V   N  K+  L K     G AG++AD   
Sbjct: 35  MTKTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEM 93

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGM 124
             + +  +LE +     R    +  +  + + L   +  I  A      DK    + +  
Sbjct: 94  TTDLISSQLELHRLNTERQVPVVCANNILKQMLFRYQGHISAALVLGGVDKYGPHIYSIH 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHN 179
                 +     +GSG   A++   +      S EE   + R A  IA+ I   + +  N
Sbjct: 154 PHGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDA--IASGIFNDLGSGSN 211

Query: 180 IVLETLKVG 188
           + L  ++  
Sbjct: 212 VDLCVIRKD 220


>gi|195483626|ref|XP_002090364.1| Prosbeta5 [Drosophila yakuba]
 gi|194176465|gb|EDW90076.1| Prosbeta5 [Drosophila yakuba]
          Length = 282

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + G  +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEI-NQFMLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGFDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                  + ++GSG  YA     +          A+E+ R+A+  A     Y+   I + 
Sbjct: 191 GSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELGRRAIYHATFRDAYSGGIIRVY 250

Query: 184 TLKVG 188
            +K  
Sbjct: 251 HIKED 255


>gi|113196863|gb|ABI31729.1| low molecular mass protein 7 [Sus scrofa]
          Length = 249

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 34  GERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPY-LLGTMSG 92

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
           S+AD       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 93  SAADCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQYRGMGLSMGSMICGWDKK 152

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +       + + GSG +YA     +      S EE   + R+A+  A    
Sbjct: 153 GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 212

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 213 SYSGGVVNM 221


>gi|219567016|dbj|BAH05026.1| proteasome subunit, beta type 8 [Oryzias luzonensis]
 gi|224473834|gb|ACN49173.1| proteasome associated anitgen processing [Oryzias luzonensis]
          Length = 275

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|315518872|dbj|BAJ51767.1| proteasome subunit, beta type 8 [Oryzias matanensis]
          Length = 272

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|315518863|dbj|BAJ51761.1| proteasome subunit, beta type 8 [Oryzias celebensis]
          Length = 272

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|146147386|gb|ABQ01989.1| proteasome subunit beta type 8 [Salmo salar]
 gi|148362158|gb|ABQ59680.1| PSMB8a [Salmo salar]
          Length = 267

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       V++A D + S G  +    A KV  +    ++   +GS+AD      
Sbjct: 62  HGTTTLAFTFRHGVIVAVDSRASAGSYIASKEANKVIEINPY-LLGTMSGSAADCQYWER 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         D     +     +
Sbjct: 121 LLAKECRLYKLRNKQRISVSAASKLLCNMMLGYRGMGLSMGSMIVGWDNKGPGLYYVDDN 180

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+ R+ ++ A     Y+   + L
Sbjct: 181 ATRLSGRMFSTGCGSSYAYGVIDSGYREDMTVEEAYELGRRGITHATHRDAYSGGVVNL 239


>gi|30802211|gb|AAH51450.1| Proteasome (prosome, macropain) subunit, beta type 8 (large
           multifunctional peptidase 7) [Mus musculus]
          Length = 276

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 12/188 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           +++  ++M H TT L  +    V++A D + + G  +      KV  +    ++   +G 
Sbjct: 62  ERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPY-LLGTMSGC 120

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           +AD       L K+      +        A    +   +     M L         DK  
Sbjct: 121 AADCQYWERLLAKECRLCYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKG 180

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     +       +   GSG +YA     +      S EE   + R+A++ A     
Sbjct: 181 PGLYYVDDNGTRLSGQMFPTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDN 240

Query: 175 YTNHNIVL 182
           Y+   + +
Sbjct: 241 YSGGVVNM 248


>gi|225193068|dbj|BAH29675.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|47271420|ref|NP_571467.2| proteasome subunit beta type-8 [Danio rerio]
 gi|42490966|gb|AAH66288.1| Proteasome (prosome, macropain) subunit, beta type, 8 [Danio rerio]
          Length = 271

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +    A KV  +    ++   +GS+AD      
Sbjct: 66  HGTTTLAFKFRHGVIVAVDSRASAGKYIDSKEANKVIEINPY-LLGTMSGSAADCQYWER 124

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         DK    +     +
Sbjct: 125 LLAKECRLYKLRNKQRISVSAASKLLSNMMLGYRGMGLSMGSMICGWDKQGPGLYYVDDN 184

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+ R+ ++ A     Y+   + L
Sbjct: 185 GTRLSGRMFSTGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVNL 243


>gi|225193038|dbj|BAH29655.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|225193014|dbj|BAH29639.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|225192955|dbj|BAH29697.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|168014771|ref|XP_001759925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689055|gb|EDQ75429.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 269

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 52  KGTTTLAFVFKHGVIVAADSRASMGNYISSQSVKKILEINPY-LLGTMAGGAADCQFWQR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +     R          +   L +   M L         D+T   +     +
Sbjct: 111 NLGTRCRLHELANKRRISVTGASKLLANTLYSYRGMGLSMGTMIAGWDETGPGLYYVDSE 170

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +    ++GSG +YA        +   S   A E+AR+++  A      +   + +
Sbjct: 171 GGRVKGTRFSVGSGSTYAYGVLDTGFNWDMSIDEAVELARRSIYHATFRDGASGGVVSV 229


>gi|70991743|ref|XP_750720.1| proteasome component Pre2 [Aspergillus fumigatus Af293]
 gi|66848353|gb|EAL88682.1| proteasome component Pre2, putative [Aspergillus fumigatus Af293]
          Length = 296

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 25/209 (11%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  + + +       
Sbjct: 57  SNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKKQ 116

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD    L  L ++   +  +  R     A    +       + M 
Sbjct: 117 DTPVPGLLGTMAGGAADCQYWLRYLSQQCTLHEIRHKRRITVAAASKILANLTYAYKGMG 176

Query: 111 LIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AE 159
           L           +    +     D       +  +GSG ++A     A      +   A 
Sbjct: 177 LSMGTMLAGMTPQEGPALYYIDSDGTRLSGNLFCVGSGQTFAYGVLDAEYRYDLTEEEAL 236

Query: 160 EIARKAMSIAADICVYTNHNIVLETLKVG 188
           E+  +++  A     Y+   I L  +K  
Sbjct: 237 ELGCRSILAAMHRDAYSGGFINLYHVKEE 265


>gi|225192946|dbj|BAH29701.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 249

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|219567058|dbj|BAH05047.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
          Length = 275

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|328872141|gb|EGG20508.1| proteasome subunit beta type 5 [Dictyostelium fasciculatum]
          Length = 300

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 12/185 (6%)

Query: 9   YAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             ++M H TT L    +G V++A D + + G  V     +KV  +    ++   AG +AD
Sbjct: 81  KPIEMAHGTTTLAFVFNGGVIVAVDSKSTQGSYVASRTVKKVIEITPN-LLGTMAGGAAD 139

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
                  L ++   Y  +        A    +   + + +   L         DKT   +
Sbjct: 140 CSFWERELGRRCRLYELRNKELISVAAASKILANIVYSYKGYGLSMGTMITGWDKTGPCL 199

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +    ++GSG +YA     +      +   A+E+ R+A+  A      + 
Sbjct: 200 YYVDNDGTRLKGQRFSVGSGSTYAYGVLDSGYKPDLTDQEAQELGRRAVYHATHRDAMSG 259

Query: 178 HNIVL 182
             I +
Sbjct: 260 GFINV 264


>gi|194885021|ref|XP_001976373.1| GG20051 [Drosophila erecta]
 gi|190659560|gb|EDV56773.1| GG20051 [Drosophila erecta]
          Length = 390

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++  D + + GQ +     RK+  L    ++   AG +AD      
Sbjct: 70  HGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDY-MLGTLAGGAADCVYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +  +          +       + M L+        D     +I    +
Sbjct: 129 VLAKECRLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDEGPKLIYVDSE 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            +     V ++GSG  YAL           S   A ++AR+A+  A     Y+   + L 
Sbjct: 189 GMRSHGQVFSVGSGSPYALGVLDTGYRHDLSDQEAYDLARRAIYHATSKDAYSGGIVRLY 248

Query: 184 TLKVG 188
            +   
Sbjct: 249 HINSE 253


>gi|194207140|ref|XP_001918357.1| PREDICTED: similar to proteasome subunit beta5t [Equus caballus]
          Length = 299

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    +RKV  + +  +++  +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGNYVACPASRKVIPVHQH-LLSTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L+++L     +  +     +    +   + +   + L         D++   +
Sbjct: 101 CATWYRVLQRELRLRALREGQLPSVASAAKLLSAMMSHYRGLDLCVATALCGWDRSGPAL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            +   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMTTQEAYALARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|254573994|ref|XP_002494106.1| Beta 5 subunit of the 20S proteasome, responsible for the
           chymotryptic activity of the proteasome [Pichia pastoris
           GS115]
 gi|238033905|emb|CAY71927.1| Beta 5 subunit of the 20S proteasome, responsible for the
           chymotryptic activity of the proteasome [Pichia pastoris
           GS115]
 gi|328354075|emb|CCA40472.1| 20S proteasome subunit beta 5 [Pichia pastoris CBS 7435]
          Length = 281

 Score =  130 bits (327), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    +++A D + + G  +      KV R+    ++   AG +AD      
Sbjct: 68  HGTTTLAFRFKEGIIVAVDSRATAGDWIASQTVNKVIRINPF-LLGTMAGGAADCQYWET 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   + M L           K    +     
Sbjct: 127 WLGTQCRLHELREKERISVAAASKILGNLVYQYKGMGLSMGTMVCGFTKKEGPTIYYVDS 186

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     +      S E+   + ++++  A     Y+  +I L
Sbjct: 187 DGSRLKGDMFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAQHRDAYSGGSINL 246


>gi|194884165|ref|XP_001976166.1| GG20151 [Drosophila erecta]
 gi|190659353|gb|EDV56566.1| GG20151 [Drosophila erecta]
          Length = 282

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + G  +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEI-NQFMLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                  + ++GSG  YA     +          A+E+ R+A+  A     Y+   I + 
Sbjct: 191 GSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELGRRAIYHATFRDAYSGGIIRVY 250

Query: 184 TLKVG 188
            +K  
Sbjct: 251 HIKED 255


>gi|225192964|dbj|BAH29691.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 249

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|195124145|ref|XP_002006554.1| GI21121 [Drosophila mojavensis]
 gi|193911622|gb|EDW10489.1| GI21121 [Drosophila mojavensis]
          Length = 314

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 12/187 (6%)

Query: 11  VKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++  H TT L  +  G VV+  D + + G+ +     +K+  L    ++   AG +AD  
Sbjct: 66  MEFDHGTTTLGFKYQGGVVLCADSRATSGEYIGSQTMKKIVELNNY-MLGTLAGGAADCV 124

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVIT 122
                L ++   +  +  R     A    M       + M L+        D   + +I 
Sbjct: 125 YWDRVLARECRLHELRYKRRISVDAAARMMCNICAEYKGMGLVMGMILAGCDDEGSKLIY 184

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHN 179
              + +     V ++GSG  YAL           S   A ++AR+A+  A     Y+   
Sbjct: 185 VDSEGMRSHGSVFSVGSGSPYALGVLDTGYRWDLSNEEAYDLARRAIYHATRKDAYSGGI 244

Query: 180 IVLETLK 186
           + L  + 
Sbjct: 245 VRLYHIT 251


>gi|57641364|ref|YP_183842.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
 gi|74502448|sp|Q5JDJ9|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
          Length = 203

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 10/186 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+  TT + +     VV+A D + SLG  V+     KV ++     IAG AG+  D  +L
Sbjct: 4   KLKGTTTVGIVCKDGVVLAADRRASLGNMVLSERVTKVFQIDDHLAIAG-AGTVGDILSL 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMG 125
           +  L  + + Y  ++ R     A        L +          ++    +   + +   
Sbjct: 63  VRLLRAEAKLYRAKVSREMSVKALATLTSNILHSGRGFAYMAWFLVGGYDSAPRLYSIDA 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                E+   A GSG  +A S            EE   +A +A+  A    V+T   + L
Sbjct: 123 AGGVTEDRFTAAGSGMEFAFSVLEENYRDGIPLEEGVKLALRAIKAATKRDVFTGGGVTL 182

Query: 183 ETLKVG 188
            T+   
Sbjct: 183 VTITEE 188


>gi|219567064|dbj|BAH05050.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
          Length = 272

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|225193059|dbj|BAH29669.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 251

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 69  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   +  +        A    +   +     M L         DK    +     +
Sbjct: 128 LLAKECRLFRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 187

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 188 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 246


>gi|302825012|ref|XP_002994143.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
 gi|300138019|gb|EFJ04804.1| hypothetical protein SELMODRAFT_272351 [Selaginella moellendorffii]
          Length = 275

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G +++A D + S+GQ +   + +K+  +    ++   AG +AD      
Sbjct: 54  HGTTTLAFEFQGGIIVAADSRASMGQYISSQSVKKILEINPY-LLGTMAGGAADCQFWQR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +     R          +   L +   M L         D+T   +     +
Sbjct: 113 NLGTRCRLHELANKRRISVAGASKLLANTLYSYRGMGLSMGTMIAGWDETGPALFYVDSE 172

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
               +  + ++GSG +YA     +    + S   A E+ R+A+  A      +  
Sbjct: 173 GGRTKGTLFSVGSGSTYAYGILDSGYKYEMSVEEAVELGRRAIYHATFRDGASGG 227


>gi|225193053|dbj|BAH29665.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 252

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +G +AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGGAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +          A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMIVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|91094821|ref|XP_971003.1| PREDICTED: similar to proteasome subunit beta 7 [Tribolium
           castaneum]
 gi|270006571|gb|EFA03019.1| hypothetical protein TcasGA2_TC010442 [Tribolium castaneum]
          Length = 275

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + +   TV   N  K+  L       G AG++AD     + 
Sbjct: 38  GTTIVGITYKDGVILGADTRATEDTTVSDKNCEKIHYLASNMYCCG-AGTAADTEQTTQM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R+      +  + +YL   +  I  A      D T   + +      
Sbjct: 97  ISSQLELHRLFTNRTPRVATANQMLKQYLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A++   +        EE   + R A  IAA I   + +  N+ + 
Sbjct: 157 TDKLPYTTMGSGSLAAMAVFESRWKPDLDEEEGVKLVRDA--IAAGIFNDLGSGSNVDVC 214

Query: 184 TLKVG 188
            ++ G
Sbjct: 215 IIRKG 219


>gi|219567012|dbj|BAH05024.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
          Length = 275

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GNRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|219567014|dbj|BAH05025.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
          Length = 272

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|330799420|ref|XP_003287743.1| proteasome subunit beta type 5 [Dictyostelium purpureum]
 gi|325082252|gb|EGC35740.1| proteasome subunit beta type 5 [Dictyostelium purpureum]
          Length = 270

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 12/185 (6%)

Query: 9   YAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             ++  H TT L     G +V+A D + + G  V   + +KV  +    ++   AG +AD
Sbjct: 53  KPLEFAHGTTTLAFVYSGGIVVAVDSKSTQGPYVASRSVKKVIEITP-TLLGTMAGGAAD 111

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
                  L ++   Y  +        A    +   + + +   L         DKT   +
Sbjct: 112 CSFWERELGRRCRLYELRNKELISVAAASKILANIVYSYKGYGLSMGTMITGWDKTGPQL 171

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTN 177
                D         + GSG +YA     +    +     A E+ R+A+  A     Y+ 
Sbjct: 172 YYVDNDGTRLHGQRFSCGSGSTYAYGVLDSGFKWEMNDEEAYELGRRAVYHATHRDSYSG 231

Query: 178 HNIVL 182
             I +
Sbjct: 232 GAINV 236


>gi|30584671|gb|AAP36588.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 5
           [synthetic construct]
          Length = 209

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 2   LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 61  RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 120

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 121 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 180


>gi|242777485|ref|XP_002479043.1| proteasome component Pre2, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218722662|gb|EED22080.1| proteasome component Pre2, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 296

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 3   VMGDKHY----AVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN- 56
            M D H      +K+ H TT L  R    +++A D + + G  +     +KV  + + N 
Sbjct: 51  AMTDDHSNPSAPIKLAHGTTTLAFRFQHGIIVATDSRATAGNWIASQTVKKVIPVSRLNL 110

Query: 57  ------------IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR 104
                       ++   AG++AD    L  L ++   +  +  R     A    +     
Sbjct: 111 ALDKDHDAPVPGLLGTMAGTAADCQYWLRYLGEQCTLHELRHKRRITVAAASKILANLTY 170

Query: 105 NLEAMILIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
           + ++M L           +    +     D       +  +GSG ++A     A      
Sbjct: 171 SYKSMGLGMGTMLAGMTPQEGPALYYIDSDGTRLAGNLFCVGSGQTFAYGVLDAEYRYDL 230

Query: 157 S---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           S   A E+ R+++  A     Y+   I L  +K  
Sbjct: 231 STDEALELGRRSILAATHRDAYSGGYINLYHVKEE 265


>gi|225192999|dbj|BAH29629.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193011|dbj|BAH29637.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 251

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 69  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   +  +        A    +   +     M L         DK    +     +
Sbjct: 128 LLAKECRLFRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 187

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 188 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 246


>gi|158522507|ref|YP_001530377.1| ATP-dependent protease peptidase subunit [Desulfococcus oleovorans
           Hxd3]
 gi|158511333|gb|ABW68300.1| 20S proteasome A and B subunits [Desulfococcus oleovorans Hxd3]
          Length = 185

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 92/174 (52%), Positives = 124/174 (71%), Gaps = 1/174 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M +TTIL VR  GV V+AGDGQV++  TV+K  A+KVRR+    I+ G AG++ADA  L 
Sbjct: 12  MRSTTILAVRHRGVTVVAGDGQVTMEATVIKHGAKKVRRIYNDRIVVGIAGATADAMALS 71

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           ERLE KLE+Y   L R++VELA++WR DKYL+ LEA+++ AD+ +  +I+G GDV+EP+ 
Sbjct: 72  ERLESKLERYNGSLTRAAVELAREWRTDKYLKRLEALMIAADQEVMYLISGTGDVIEPDA 131

Query: 133 GVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            V+AIGSG   A +AA AL+  +   A  IA+ AM+IAA ICVYTN  I +E L
Sbjct: 132 PVLAIGSGSVAARAAALALVEHSDLDAAGIAKAAMAIAAAICVYTNDQITVEEL 185


>gi|219567034|dbj|BAH05035.1| proteasome subunit, beta type 8 [Oryzias hubbsi]
          Length = 275

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEAPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|145353826|ref|XP_001421201.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581438|gb|ABO99494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 297

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L    +  +V+A D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 63  HGTTTLAFIFEHGIVVAVDSRASQGPYISSQTVKKVIEINPF-LLGTMAGGAADCQFWQR 121

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L  +   +  +  +     A    +   L + +        M+   D     +     +
Sbjct: 122 NLGIQCRLHELENGKRITVRAASKLLANTLYSYKGKGLSMGTMVAGWDLNGPGLYYVDSE 181

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +    ++GSG  +A            +   A E+ R+A+  A     ++   + +
Sbjct: 182 GTRLKGQRFSVGSGSLFAYGVLDQGYKWDLTVEEACELGRRAIYHATFRDAFSGGTVSV 240


>gi|302781737|ref|XP_002972642.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
 gi|300159243|gb|EFJ25863.1| hypothetical protein SELMODRAFT_270977 [Selaginella moellendorffii]
          Length = 277

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G +++A D + S+GQ +   + +K+  +    ++   AG +AD      
Sbjct: 56  HGTTTLAFEFQGGIIVAADSRASMGQYISSQSVKKILEINPY-LLGTMAGGAADCQFWQR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +     R          +   L +   M L         D+T   +     +
Sbjct: 115 NLGTRCRLHELANKRRISVAGASKLLANTLYSYRGMGLSMGTMIAGWDETGPALFYVDSE 174

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
               +  + ++GSG +YA     +    + S   A E+ R+A+  A    
Sbjct: 175 GGRTKGTLFSVGSGSTYAYGILDSGYKFEMSVEEAVELGRRAIYHATFRD 224


>gi|229366194|gb|ACQ58077.1| Proteasome subunit beta type-7 precursor [Anoplopoma fimbria]
          Length = 277

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTICGVVYKDGVVLGADTRATEGMIVADKNCSKIHFISPNIYCCG-AGTAADTEMTTQI 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R       +  + + L   +  I  A      D     + +      
Sbjct: 102 ISSNLELHALSTGRLPRLATANRMLKQMLFRYQGYISAALVLGGVDCNGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   + R A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDRYKPDMEEEEAKRLVRDA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +  G
Sbjct: 220 VITKG 224


>gi|209733970|gb|ACI67854.1| Proteasome subunit beta type-8 precursor [Salmo salar]
          Length = 267

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       V++A D + S G  +    A KV  +    ++   +GS+AD      
Sbjct: 62  HGTTTLAFTFRHGVIVAVDSRASAGSYIASKEANKVIEINPY-LLGTMSGSAADCQYWER 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         D     +     +
Sbjct: 121 LLAKECRLYKLRNKQRISVSAASKLLCNMMLGYRGMGLSMGSMIVGWDNKGPGLYYVDDN 180

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+ R+ +++A     Y+   + L
Sbjct: 181 ATRLSGRMFSTGCGSSYAYGVIDSGYREDMTVEEAYELGRRGITLATHRDAYSGGVVNL 239


>gi|255988227|gb|ACU51028.1| 20S proteasome beta5 subunit [Conocephalum conicum]
          Length = 280

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD     
Sbjct: 58  LHGTTTLAFVFKEGVIVAADSRASMGNYISSQDVKKILEINPY-LLGTMAGGAADCQFWQ 116

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L  +   +     R          +   L +   M L         D+T   +     
Sbjct: 117 RNLGTRCRLHELGNKRRISVTGASKLLANTLYSYRGMGLSMGTMIAGWDETGPGLYYVDS 176

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
           +    +    ++GSG +YA            +   A E+AR+++  A    
Sbjct: 177 EGGRVKGRRFSVGSGSTYAYGVLDTGFRWDMTVEEAVELARRSIYHATFRD 227


>gi|558526|dbj|BAA06097.1| proteasome subunit X [Homo sapiens]
 gi|30582393|gb|AAP35423.1| proteasome (prosome, macropain) subunit, beta type, 5 [Homo
           sapiens]
          Length = 208

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 2   LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 61  RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 120

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +         ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 121 EGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 180


>gi|332373358|gb|AEE61820.1| unknown [Dendroctonus ponderosae]
          Length = 279

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G VV+A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 68  HGTTTLGFMYQGGVVLAVDSRATGGQFIGSQTMKKIVEINDF-LLGTLAGGAADCVYWDR 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    M   + N + M L         DK    +     +
Sbjct: 127 VLAKQCRMYELRNRERISVAAASKLMSNMVYNYKGMGLSMGMMLAGWDKRGPQLYYIDSE 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                  + ++GSG  YA     +      + EE   + R+++  A     Y+   + +
Sbjct: 187 GARTPGKIFSVGSGSVYAFGVLDSGYKWDLTDEEAYDLGRRSIYHATHRDAYSGGIVRV 245


>gi|225193065|dbj|BAH29673.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 249

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDHN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|225193002|dbj|BAH29631.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193017|dbj|BAH29641.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 249

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSSYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|219567066|dbj|BAH05051.1| proteasome subunit, beta type 8 [Oryzias minutillus]
          Length = 238

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   N  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNNVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNSQRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|315518857|dbj|BAJ51757.1| proteasome subunit, beta type 8 [Oryzias celebensis]
          Length = 273

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 68  HGTTTLAFKFKHGVIVAVDSRASAGNYISAGEYNKVIEINPY-LLGTMSGSAADCKYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 127 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDN 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG SYA     +      +   A E+ R+ ++ A     Y+   + L 
Sbjct: 187 GNRLSGRMFSTGSGNSYAYGVLDSGYKEDMTIEEAYELGRRGIAHATHRDSYSGGVVNLY 246

Query: 184 TLKVG 188
            ++  
Sbjct: 247 HIQED 251


>gi|673450|emb|CAA45780.1| proteasome subunit MC13 [Mus musculus]
          Length = 208

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + + G  +      KV  +    ++   +G +AD      
Sbjct: 3   HGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPY-LLGTMSGCAADCQYWER 61

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 62  LLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDN 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                  + + GSG +YA     +      S EE   + R+A++ A     Y+   + +
Sbjct: 122 GTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNM 180


>gi|225192978|dbj|BAH29683.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193050|dbj|BAH29663.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 249

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDHN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|225192943|dbj|BAH29703.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 249

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDNN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|307110687|gb|EFN58923.1| hypothetical protein CHLNCDRAFT_56983 [Chlorella variabilis]
          Length = 275

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 11/178 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G V+IA D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 58  HGTTTLGFIFQGGVIIAVDSRASQGSYISSQTVKKVIEINPH-LLGTMAGGAADCQFWER 116

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L ++   Y     +          +   + +   M L         D+    +     D
Sbjct: 117 NLGRQCRLYELANGKRITVRGASKLLANTMFSYRGMGLSMGTMVAGWDEAGPGLYYVDSD 176

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIV 181
               +  + ++GSG  YA            S   A E+ ++++  A      +   + 
Sbjct: 177 GQRTKGKLFSVGSGSLYAYGVLDEGYRWDLSVEEAVELGQRSIYHATFRDAASGGTVS 234


>gi|315518881|dbj|BAJ51773.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
          Length = 272

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFRHGVIVAVDSRASAGNYLDSNDANKVIEINPY-LLGTMSGSAADCQYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYKLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 186 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 244


>gi|219567044|dbj|BAH05040.1| proteasome subunit, beta type 8 [Oryzias javanicus]
          Length = 238

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFRFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +   + M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYKGMGLSMGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|15292875|gb|AAK92808.1| putative proteasome epsilon chain precursor [Arabidopsis thaliana]
          Length = 274

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L     G V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 56  KGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 115 NLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNE 174

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
               +    ++GSG  YA     +      S   A E+AR+++  A    
Sbjct: 175 GGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRD 224


>gi|213410533|ref|XP_002176036.1| proteasome subunit beta type-5 [Schizosaccharomyces japonicus
           yFS275]
 gi|212004083|gb|EEB09743.1| proteasome subunit beta type-5 [Schizosaccharomyces japonicus
           yFS275]
          Length = 274

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 66/193 (34%), Gaps = 12/193 (6%)

Query: 7   KHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           KH  + M H TT L  R    +V+  D + S G  V     +KV  +    ++   AG +
Sbjct: 52  KHCRINMNHGTTTLAFRYKHGIVVCVDSRASAGPLVASQTVKKVIEINPY-LLGTMAGGA 110

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL------ 119
           AD       L  +   +  +        +    +   + + +   L     +        
Sbjct: 111 ADCQFWETVLGMECRLHQLRNHELISVSSASKILSTIVYSYKGYGLSMGTMLAGTGKGGT 170

Query: 120 -VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +     D    E  + ++GSG ++A     A      S EE   + ++++  A     Y
Sbjct: 171 ALFYIDSDGTRLEGDLFSVGSGSTFAYGVLDAGYRWDLSKEEALYLGKRSILAATHRDAY 230

Query: 176 TNHNIVLETLKVG 188
           +   I L  +   
Sbjct: 231 SGGTINLYHIDEE 243


>gi|315518885|dbj|BAJ51775.1| proteasome subunit, beta type 8 [Oryzias dancena]
 gi|315518889|dbj|BAJ51777.1| proteasome subunit, beta type 8 [Oryzias dancena]
          Length = 238

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYKLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLFYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|219567050|dbj|BAH05043.1| proteasome subunit, beta type 8 [Oryzias javanicus]
          Length = 238

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|72162191|ref|YP_289848.1| proteasome subunit beta [Thermobifida fusca YX]
 gi|123629303|sp|Q47NZ4|PSB_THEFY RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|71915923|gb|AAZ55825.1| bacterial proteasome, beta component. Threonine peptidase. MEROPS
           family T01B [Thermobifida fusca YX]
          Length = 282

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 17/180 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           ATTI+ V   G VV+AGD + + G  +   +  K+ R  + + + G AGS+     L + 
Sbjct: 54  ATTIVAVVFSGGVVLAGDRRATSGNVIANRDMDKLFRTDEFSAV-GIAGSAGIGIELAKL 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG--------- 125
            + +LE Y  +  R      K  R+   +R+   + +     + L++             
Sbjct: 113 FQVELEHYEKREGRPLSLEGKANRLATMIRSNLGLAMQGFVVVPLLVGYDTSRGEGRIFS 172

Query: 126 ----DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNH 178
                    E+   AIGSG  YA  A + L         A  +A +A+  AAD    T  
Sbjct: 173 YDPVGGCYEEHRYHAIGSGSVYAKGALKKLYRDDLAETDAALVALQALYDAADDDSATGG 232


>gi|219567030|dbj|BAH05033.1| proteasome subunit, beta type 8 [Oryzias dancena]
          Length = 275

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|225425821|ref|XP_002264828.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297738390|emb|CBI27591.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 63/183 (34%), Gaps = 15/183 (8%)

Query: 5   GDKHYAVKM----HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           G +  A++M      TT L       V++A D + S+G  +   + +K+  +    ++  
Sbjct: 41  GFQKDAIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGT 99

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------A 113
            AG +AD       L  K   +     R          +   L +   M L         
Sbjct: 100 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGW 159

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
           D+T   +     +    +    ++GSG  YA            S   A E+AR+++  A 
Sbjct: 160 DETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDNGYRYDMSVEEAAELARRSIYHAT 219

Query: 171 DIC 173
              
Sbjct: 220 FRD 222


>gi|224473800|gb|ACN49144.1| proteasome beta 8 subunit proprotein [Oryzias dancena]
          Length = 275

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|294628476|ref|ZP_06707036.1| 20S proteasome beta-subunit [Streptomyces sp. e14]
 gi|292831809|gb|EFF90158.1| 20S proteasome beta-subunit [Streptomyces sp. e14]
          Length = 281

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 19/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------------DKTITL 119
             + +LE +            K  R+   +R+   M +                DK    
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDKGRIF 170

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
                G   E E+G  A GSG  +A  A + L     S  E   +  +A+  AAD    T
Sbjct: 171 SYDVTGGRSE-EHGYAATGSGSIFARGAMKKLYREDLSEAEATTLVVQALYDAADDDSAT 229

Query: 177 NH 178
             
Sbjct: 230 GG 231


>gi|148694874|gb|EDL26821.1| proteasome (prosome, macropain) subunit, beta type 7, isoform CRA_a
           [Mus musculus]
          Length = 266

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|315518860|dbj|BAJ51759.1| proteasome subunit, beta type 8 [Oryzias celebensis]
          Length = 275

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|219567018|dbj|BAH05027.1| proteasome subunit, beta type 8 [Oryzias celebensis]
          Length = 275

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|219567062|dbj|BAH05049.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
          Length = 238

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGITHATHRDAYSGGSVNM 210


>gi|5833465|gb|AAD53521.1|AF155581_1 proteasome subunit beta 7 [Danio rerio]
          Length = 275

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 69/196 (35%), Gaps = 14/196 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           +G    A +   TTI  +     VV+  D + + G  V   N  K+  +       G AG
Sbjct: 30  LGFSSPAARKTGTTICGIVYKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AG 88

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTI 117
           ++AD     + +   LE +     R       +  + + L   +  I  A      D T 
Sbjct: 89  TAADTEMTTQIISSNLELHSLSTGRLPRVATANRMLKQMLFRYQGYIGAALVLGGVDCTG 148

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI-- 172
             + +        +   + +GSG   A++              A+ + R A  IAA I  
Sbjct: 149 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDMEEEDAKSLVRDA--IAAGIFN 206

Query: 173 CVYTNHNIVLETLKVG 188
            + +  NI +  +  G
Sbjct: 207 DLGSGSNIDVCVITKG 222


>gi|318085399|ref|NP_001187550.1| proteasome subunit beta type-7 [Ictalurus punctatus]
 gi|308323333|gb|ADO28803.1| proteasome subunit beta type-7 [Ictalurus punctatus]
          Length = 277

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     V++  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTICGVVYKDGVILGADTRATEGMVVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R       +  + + L      I  A      D     + +      
Sbjct: 102 ISSNLELHSLSTNRLPRVATANRMLKQMLFRYRGYIGAALVLGGVDCNGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   + R A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDRYRPDLEEEEAKLLVRDA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +  G
Sbjct: 220 VISKG 224


>gi|116791186|gb|ABK25888.1| unknown [Picea sitchensis]
          Length = 271

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       +++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 54  KGTTTLAFIFKEGIMVAADSRASMGGYISSQSVKKIIEINPY-LLGTMAGGAADCQFWHR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADIC 173
               +    ++GSG  YA     +          A E+AR+++  A    
Sbjct: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYRWDMPVEEAAELARRSIYHATFRD 222


>gi|167540121|ref|XP_001741562.1| proteasome subunit beta type-5 precursor [Entamoeba dispar SAW760]
 gi|165893870|gb|EDR21989.1| proteasome subunit beta type-5 precursor, putative [Entamoeba
           dispar SAW760]
          Length = 252

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L++     +++A D + + G  +   + +K   +    II   AG +AD      
Sbjct: 37  HGTTTLSMIIKEGIIVAVDSRATRGAFISSGSVQKYIPITSH-IIGTMAGGAADCAYWER 95

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L ++   +  +        A    +   L           +MI   DKT   +      
Sbjct: 96  ELTRQCRLFELRNKPPISVAAASKMLANILYQYRNYNLSVGSMICGYDKTGPHIFYVEDG 155

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            +     + ++GSG  YA+S   +          A E+AR+A+  A    V +  N+ + 
Sbjct: 156 GVRIPGHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASGGNVNVI 215

Query: 184 TLKVG 188
            +   
Sbjct: 216 FIDKD 220


>gi|219567020|dbj|BAH05028.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
 gi|315518869|dbj|BAJ51765.1| proteasome subunit, beta type 8 [Oryzias matanensis]
 gi|315518878|dbj|BAJ51771.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
          Length = 275

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVSAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|116790903|gb|ABK25785.1| unknown [Picea sitchensis]
          Length = 271

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       +++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 54  KGTTTLAFIFKEGIMVAADSRASMGGYISSQSVKKIIEINPH-LLGTMAGGAADCQFWHR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSIGTMIAGWDETGPGLYYVDSE 172

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNH 178
               +    ++GSG  YA     +          A E+AR+++  A      +  
Sbjct: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYRWDMPVEEAAELARRSIYHATFRDGASGG 227


>gi|15222152|ref|NP_172765.1| PBE1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|3914425|sp|O23717|PSB5A_ARATH RecName: Full=Proteasome subunit beta type-5-A; AltName: Full=20S
           proteasome beta subunit E-1; AltName: Full=Proteasome
           component E; AltName: Full=Proteasome epsilon-1 chain;
           Flags: Precursor
 gi|4850389|gb|AAD31059.1|AC007357_8 Identical to gb|Y13695 multicatalytic endopeptidase complex,
           proteasome precursor, beta subunit (prce) from
           Arabidopsis thaliana. ESTs gb|Y09360, gb|F13852,
           gb|T20555, gb|T44620, gb|AI099779 and gb|AA586183 come
           from this gene
 gi|13194776|gb|AAK15550.1|AF348579_1 putative proteasome epsilon chain precursor [Arabidopsis thaliana]
 gi|2511596|emb|CAA74029.1| multicatalytic endopeptidase complex, proteasome precursor, beta
           subunit [Arabidopsis thaliana]
 gi|3421117|gb|AAC32072.1| 20S proteasome beta subunit PBE1 [Arabidopsis thaliana]
 gi|23297641|gb|AAN12998.1| proteasome epsilon chain precursor [Arabidopsis thaliana]
 gi|332190844|gb|AEE28965.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
          Length = 274

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L     G V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 56  KGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 115 NLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNE 174

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
               +    ++GSG  YA     +      S   A E+AR+++  A    
Sbjct: 175 GGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRD 224


>gi|224073935|ref|XP_002191642.1| PREDICTED: proteasome (prosome, macropain) subunit, beta type, 7
           [Taeniopygia guttata]
          Length = 277

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVIFKDGVVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTEMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIHPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   + R A  IAA I   + +  NI + 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKYKPDMEEEEAKQLVRDA--IAAGIYNDLGSGSNIDIC 219

Query: 184 TL 185
            +
Sbjct: 220 VI 221


>gi|91085931|ref|XP_970194.1| PREDICTED: similar to proteasome subunit beta type 5,8 [Tribolium
           castaneum]
          Length = 279

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G VV+A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 68  HGTTTLGFMYKGGVVLAVDSRATGGQFIGSQTMKKIVEINDF-LLGTLAGGAADCVYWDR 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    M   + N + M L         DK    +     +
Sbjct: 127 VLAKQCRMYELRNRERISVAAASKLMANMVYNYKGMGLSMGMMLAGWDKRGPQLYYVDSE 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                  V ++GSG  YA     +      + EE   + R+++  A     Y+   + +
Sbjct: 187 GTRTPGKVFSVGSGSIYAFGVLDSGYKWDLTDEEAYDLGRRSIYHATHRDAYSGGIVRV 245


>gi|302533523|ref|ZP_07285865.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Streptomyces sp. C]
 gi|302442418|gb|EFL14234.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Streptomyces sp. C]
          Length = 279

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 50  HGTTIVAATFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 108

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +      +     K  R+   +R+   M +     + L              
Sbjct: 109 LFQLELEHFEKVEGATLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDEAKEKGRIF 168

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E+G  A GSG  +A  + + L     S E+   +  +A+  AAD    T 
Sbjct: 169 SYDVTGGRSEEHGYAATGSGSIFARGSMKKLYRPDLSEEQATTLVVQALYDAADDDSATG 228

Query: 178 H 178
            
Sbjct: 229 G 229


>gi|224102305|ref|XP_002312631.1| predicted protein [Populus trichocarpa]
 gi|222852451|gb|EEE89998.1| predicted protein [Populus trichocarpa]
          Length = 265

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 55  KGTTTLAFIFKDGVIVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 113

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 114 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 173

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
               +    ++GSG  YA     +      S   A E+ R+A+  A      +  
Sbjct: 174 GGRLKGTRFSVGSGSPYAYGILDSGYRFDMSIEEAAELGRRAIYHATFRDGASGG 228


>gi|195382663|ref|XP_002050049.1| GJ21921 [Drosophila virilis]
 gi|194144846|gb|EDW61242.1| GJ21921 [Drosophila virilis]
          Length = 279

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + GQ +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKYQGGVILAVDSRATGGQYIGSQSMKKIVEI-NQFLLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLAKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                  V ++GSG  YA     +          A+E+ R+A+  A     Y+   + +
Sbjct: 191 GSRTPGNVFSVGSGSIYAFGVLDSGYHWDLKDTEAQELGRRAIYHATFRDAYSGGIVRV 249


>gi|67476394|ref|XP_653800.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56470790|gb|EAL48414.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 252

 Score =  128 bits (322), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L++     +++A D + + G  +   + +K   +    II   AG +AD      
Sbjct: 37  HGTTTLSMIIKEGIIVAVDSRATRGAFISSGSVQKYIPITSH-IIGTMAGGAADCAYWER 95

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L ++   +  +        A    +   L           +MI   DKT   +      
Sbjct: 96  ELTRQCRLFELRNKPPISVAAASKMLANILYQYRNYNLSVGSMICGYDKTGPHIFYVEDG 155

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            +     + ++GSG  YA+S   +          A E+AR+A+  A    V +  N+ + 
Sbjct: 156 GVRIPGHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASGGNVNVI 215

Query: 184 TLKVG 188
            +   
Sbjct: 216 FIDKD 220


>gi|256391621|ref|YP_003113185.1| 20S proteasome A and subunit betas [Catenulispora acidiphila DSM
           44928]
 gi|302595822|sp|C7PVV2|PSB_CATAD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|256357847|gb|ACU71344.1| 20S proteasome A and B subunits [Catenulispora acidiphila DSM
           44928]
          Length = 288

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+++   G V++AGD + ++G  + + +  KV    + + + G AGS+  A  ++ 
Sbjct: 59  HGTTIVSIAFPGGVLLAGDRRATMGNFIAQRDIEKVFPADEFSAV-GIAGSAGLAVEVVR 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE Y      +     K  R+   +R   AM +     + L              
Sbjct: 118 LFQLELEHYEKIEGVTLSTDGKANRLATMIRGNLAMAMQGLAVVPLFAGYDEETGQGRIF 177

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                  +  E+   ++GSG  +A  A + L     +AE+    A +A+  AAD    T 
Sbjct: 178 SYDVTGGMYEEHDFYSVGSGSMFARGALKKLFRPDFTAEDAAVAAVQALYDAADDDSATG 237

Query: 178 H 178
            
Sbjct: 238 G 238


>gi|297844202|ref|XP_002889982.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335824|gb|EFH66241.1| hypothetical protein ARALYDRAFT_471459 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 274

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L     G V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 56  KGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 115 NLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNE 174

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
               +    ++GSG  YA     +      S   A E+AR+++  A      +  
Sbjct: 175 GGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGG 229


>gi|333028209|ref|ZP_08456273.1| putative 20S proteasome beta-subunit [Streptomyces sp. Tu6071]
 gi|332748061|gb|EGJ78502.1| putative 20S proteasome beta-subunit [Streptomyces sp. Tu6071]
          Length = 280

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTIL +  DG V++AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 51  HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAV-GIAGTAGLAVEMVK 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +      +     K  R+   +R    M +     + L              
Sbjct: 110 LFQLELEHFEKVEGTTLSLEGKANRLATMIRGNLGMAMQGLAVVPLFAGYDVDRGTGRIF 169

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E G  + GSG  +A  A + L      A++   +A +A+  AAD    T 
Sbjct: 170 SYDVAGGRSEEYGYASTGSGSVFARGALKKLYRPGLDADQASILAIQALYDAADDDSATG 229

Query: 178 H 178
            
Sbjct: 230 G 230


>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
           AL-21]
 gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
           sp. AL-21]
          Length = 210

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 72/193 (37%), Gaps = 11/193 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            +   ++  TT + V     +V A + + S+G  +    A K+ ++      A  AGS +
Sbjct: 1   MNDKDRLKGTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKIDDHIG-ATIAGSVS 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL 119
           DA  L+  +  ++  Y  +        A              Y   ++ ++   D+    
Sbjct: 60  DAQKLMGYISAEVALYRLRNGAPMSVEAAANMTSNILHASRFYPYYVQTLLGGVDEKGPA 119

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
           + +        ++ +++ GSG   A        + +   EE   +  +A+  A +   Y+
Sbjct: 120 LFSLDPSGGVIKDLMISTGSGSPVAYGVLEDRYNQEMDIEEGTSVVIRAIKAAMERDTYS 179

Query: 177 NHNIVLETLKVGD 189
            + I + T+   +
Sbjct: 180 GNGIKVATITKEE 192


>gi|254392855|ref|ZP_05008025.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
 gi|197706512|gb|EDY52324.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
          Length = 281

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAATYPGGVVLAGDRRATMGNMIAQRDMEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +            K  R+   +R    M +     + L              
Sbjct: 111 LFQLELEHFEKVEGTQLSLEGKANRLSAMIRGNLGMAMQGLAVVPLFAGYDVDREKGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E G  A GSG  +A  + + L     + E+   +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEEQGFAATGSGSVFARGSLKKLYRPDLTEEQATTLVVQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
 gi|302595703|sp|C6A2V9|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
          Length = 207

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 10/186 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+  TT + +     VV+  D + SLG  V+     K+ ++     +AG AG+  D  +L
Sbjct: 6   KIKGTTTVGIVCKDGVVLTADRRASLGNMVISKGVTKIFQVDDHLALAG-AGAVGDILSL 64

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMD------KYLRNLEAMILIADKTITLVITGMG 125
           +  L  + + Y  ++ +     A            KYL      ++        + +   
Sbjct: 65  VRALRAESKLYRAKVGKEMSTKALATLTSNILSGRKYLPYFGWFLIGGYDEKPSLYSIDM 124

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVL 182
                E+  ++ GSG  +A S      S + +     ++A KA++ A    V+T   I++
Sbjct: 125 AGGITEDKYVSAGSGMEFAYSILDNEYSEKITLNNGVKLAIKAINAAIKRDVFTGDGIMV 184

Query: 183 ETLKVG 188
            T+   
Sbjct: 185 VTIDRE 190


>gi|217073968|gb|ACJ85344.1| unknown [Medicago truncatula]
          Length = 262

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 53  KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 111

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L  K   +     R          +   L +          MI   D+T   +     +
Sbjct: 112 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGSSVGTMIAGWDETGPGLYYVDSE 171

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
               +    ++GSG  YA     +      S   A E+AR+A+  A    
Sbjct: 172 GGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRD 221


>gi|219567026|dbj|BAH05031.1| proteasome subunit, beta type 8 [Oryzias minutillus]
          Length = 238

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S GQ +   +  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGQYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNQRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|157136298|ref|XP_001656819.1| proteasome subunit beta type 7,10 [Aedes aegypti]
 gi|108881087|gb|EAT45312.1| proteasome subunit beta type 7,10 [Aedes aegypti]
          Length = 280

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + 
Sbjct: 39  GTTIVGIIYKDGVILGADTRATEGPIVADKNCEKIHYLAKNMYCCG-AGTAADTEMTTQM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   LE +     R+   +A +  + ++L   +        +   D T + +        
Sbjct: 98  IASNLELHRLNTGRTVPVVAANTMLKQFLFRYQGYVSAALVLGGVDNTGSYIYCIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A+S   +        EE   + R A  IAA +   + +  NI L 
Sbjct: 158 TDKLPYATMGSGSLAAMSVFESRWKPDMEEEEGKKLVRDA--IAAGVFNDLGSGSNIDLC 215

Query: 184 TLKVG 188
            +K  
Sbjct: 216 VIKKD 220


>gi|295839802|ref|ZP_06826735.1| proteasome, beta subunit [Streptomyces sp. SPB74]
 gi|197697742|gb|EDY44675.1| proteasome, beta subunit [Streptomyces sp. SPB74]
          Length = 280

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTIL +  DG V++AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 51  HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAV-GIAGTAGLAVEMVK 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +      +     K  R+   +R    M +     + L              
Sbjct: 110 LFQLELEHFEKVEGATLSLEGKANRLATMIRGNLGMAMQGLAVVPLFAGYDVDRGTGRIF 169

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E G  + GSG  +A  A + L     SA++   +A +A+  AAD    T 
Sbjct: 170 SYDVAGGRSEEYGYASTGSGSVFARGALKKLYRPGLSADDASVLAIQALYDAADDDSATG 229

Query: 178 H 178
            
Sbjct: 230 G 230


>gi|219567052|dbj|BAH05044.1| proteasome subunit, beta type 8 [Oryzias javanicus]
          Length = 238

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   N  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNNVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|219567028|dbj|BAH05032.1| proteasome subunit, beta type 8 [Oryzias minutillus]
          Length = 238

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQHWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYKLRNNQRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|240103778|ref|YP_002960087.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
           gammatolerans EJ3]
 gi|302595756|sp|C5A7L1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
           gammatolerans EJ3]
          Length = 201

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 68/189 (35%), Gaps = 10/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
               M  TT + V     VV+A D + +LG  V      KV ++     IAG AG   D 
Sbjct: 4   SPSAMKGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQIDDHLAIAG-AGLVGDI 62

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKD------WRMDKYLRNLEAMILIADKTITLVIT 122
            +L+  L  + + Y  ++ R     A            ++L      ++        + +
Sbjct: 63  LSLVRLLRAEAKLYRAKVGREMSVKALATLVSNVLHGSRHLPYFAWFLIGGYDVKPRLYS 122

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                   E   +A GSG  +AL+      S     +E   +A +A+  A    VYT   
Sbjct: 123 IDAAGGVTEERFIAAGSGMEFALALLEENFSDGMGLDEGIDLAVRAVKAAIRRDVYTGEG 182

Query: 180 IVLETLKVG 188
           + +  +   
Sbjct: 183 VTVVAITKE 191


>gi|254385050|ref|ZP_05000384.1| 20S proteasome beta-subunit [Streptomyces sp. Mg1]
 gi|194343929|gb|EDX24895.1| 20S proteasome beta-subunit [Streptomyces sp. Mg1]
          Length = 279

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 19/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 50  HGTTIVATTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 108

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------- 120
             + +LE +      +     K  R+   +R+   M +     + L              
Sbjct: 109 LFQLELEHFEKVEGATLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGWDEGKEKGRIF 168

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
                G   E E+G  A GSG  +A  + + L     + E+   +  +A+  AAD    T
Sbjct: 169 SYDVTGGRSE-EHGFAATGSGSIFARGSMKKLYRPDLTEEQATTLVVQALYDAADDDSAT 227

Query: 177 NH 178
             
Sbjct: 228 GG 229


>gi|195489076|ref|XP_002092584.1| GE11586 [Drosophila yakuba]
 gi|194178685|gb|EDW92296.1| GE11586 [Drosophila yakuba]
          Length = 315

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++  D + + GQ +     RK+  L    ++   AG +AD      
Sbjct: 70  HGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDY-MLGTLAGGAADCVYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +  +          +       + M L+        D     +I    D
Sbjct: 129 VLAKECRLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDEGPKLIYVDSD 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            +     V ++GSG  YAL           S   A ++AR+A+  A     Y+   + L 
Sbjct: 189 GMRSHGLVFSVGSGSPYALGVLDTGYRHDLSDQEAYDLARRAIYHATSKDAYSGGIVRLY 248

Query: 184 TLKVG 188
            +   
Sbjct: 249 HINSE 253


>gi|157909841|ref|NP_001039029.2| proteasome subunit beta type-7 [Danio rerio]
 gi|141796175|gb|AAI35051.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
 gi|157888630|emb|CAE30392.2| proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
 gi|190340004|gb|AAI63781.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
          Length = 277

 Score =  128 bits (321), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 69/196 (35%), Gaps = 14/196 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           +G    A +   TTI  +     VV+  D + + G  V   N  K+  +       G AG
Sbjct: 32  LGFSSPAARKTGTTICGIVYKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AG 90

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTI 117
           ++AD     + +   LE +     R       +  + + L   +  I  A      D T 
Sbjct: 91  TAADTEMTTQIISSNLELHSLSTGRLPRVATANRMLKQMLFRYQGYIGAALVLGGVDCTG 150

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI-- 172
             + +        +   + +GSG   A++              A+ + R A  IAA I  
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDMEEEDAKSLVRDA--IAAGIFN 208

Query: 173 CVYTNHNIVLETLKVG 188
            + +  NI +  +  G
Sbjct: 209 DLGSGSNIDVCVITKG 224


>gi|146414580|ref|XP_001483260.1| hypothetical protein PGUG_03989 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146391733|gb|EDK39891.1| hypothetical protein PGUG_03989 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 281

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G +++A D + + G  +      KV R+    ++   AG +AD      
Sbjct: 68  HGTTTLAFRFKGGIIVAVDSRATAGNWIASQTVNKVIRINP-MLLGTMAGGAADCQYWET 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            L  +   +  +        A    +   +   + M L           K    +     
Sbjct: 127 WLGTQCRLHELREKERISVAAASKILSNLIYEYKGMGLSMGTMICGYTKKEGPTIYYVDS 186

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D    +  +  +GSG ++A     A +    S E+   + ++ +  A     Y+  +I L
Sbjct: 187 DGTRLKGDLFCVGSGQTFAYGVVDAGLKWDMSVEDALYLGKRGILAATHRDAYSGGSINL 246


>gi|150247151|ref|NP_001092856.1| proteasome subunit beta type-11 [Bos taurus]
 gi|148877297|gb|AAI46055.1| PSMB11 protein [Bos taurus]
 gi|296483653|gb|DAA25768.1| proteasome beta 11 subunit [Bos taurus]
          Length = 289

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 11/187 (5%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
             H     H TT L  R    V+ A D + S G  V    +RKV  + +  ++   +G+S
Sbjct: 40  QTHGPRLAHGTTTLAFRFRHGVIAAADTRSSCGNYVECPASRKVIPVHQH-LLGTTSGTS 98

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD  T    L+++L     +  +          +   +     + L         D++  
Sbjct: 99  ADCVTWYRVLQRELRLRALREGQLPSVAGAAKLLSVMMSRYRGLDLCVATALCGWDRSGP 158

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +     D    +  + ++GSG  YA            S   A  +AR A++ A     Y
Sbjct: 159 ALFYVYSDGTCLQGNIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATRRDAY 218

Query: 176 TNHNIVL 182
           +  ++ L
Sbjct: 219 SGGSVDL 225


>gi|302518112|ref|ZP_07270454.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Streptomyces sp. SPB78]
 gi|318059100|ref|ZP_07977823.1| proteasome subunit beta [Streptomyces sp. SA3_actG]
 gi|318077875|ref|ZP_07985207.1| proteasome subunit beta [Streptomyces sp. SA3_actF]
 gi|302427007|gb|EFK98822.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Streptomyces sp. SPB78]
          Length = 280

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTIL +  DG V++AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 51  HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAV-GIAGTAGLAVEMVK 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +      +     K  R+   +R    M +     + L              
Sbjct: 110 LFQLELEHFEKVEGATLSLEGKANRLATMIRGNLGMAMQGLAVVPLFAGYDVDRGTGRIF 169

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E G  + GSG  +A  A + L      A++   +A +A+  AAD    T 
Sbjct: 170 SYDVAGGRSEEYGYASTGSGSVFARGALKKLYRPGLDADQASILAIQALYDAADDDSATG 229

Query: 178 H 178
            
Sbjct: 230 G 230


>gi|221220708|gb|ACM09015.1| Proteasome subunit beta type-5 precursor [Salmo salar]
          Length = 270

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 12/181 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + +    +     +KV  +    ++   AG +AD     
Sbjct: 63  LHGTTTLAFKFQHGVIVAVDSRATASSYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 121

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DKT   +     
Sbjct: 122 RLLARQCHVYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKTGPGLYYVDS 181

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEE---IARKAMSIAADICVYTNHNIV 181
           +       + A+GSG  YA     + +     + EE   + R+A+  A     Y+   + 
Sbjct: 182 EGNRVCGDLFAVGSGSMYAYGIVDSGLKQKDLTVEEACDLGRRAIYQATYRDAYSGGQVN 241

Query: 182 L 182
           L
Sbjct: 242 L 242


>gi|297198505|ref|ZP_06915902.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Streptomyces sviceus ATCC 29083]
 gi|197716162|gb|EDY60196.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Streptomyces sviceus ATCC 29083]
          Length = 281

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +            K  R+   +R+   M +     + L              
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRERGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E+   A GSG  +A  A + L     + E+   +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEEHNFAATGSGSVFARGAMKKLYRGDLTEEQATTLVVQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|255646634|gb|ACU23791.1| unknown [Glycine max]
          Length = 272

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 54  KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTVAGGAADCQFWHR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 113 NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 172

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
               +    ++GSG  YA     +      S   A E+AR+A+  A    
Sbjct: 173 GGRLKGTRFSVGSGSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFRD 222


>gi|219567036|dbj|BAH05036.1| proteasome subunit, beta type 8 [Oryzias javanicus]
          Length = 238

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFRFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  +I +
Sbjct: 152 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSINM 210


>gi|62122596|dbj|BAD93264.1| PSMB8-A [Oryzias latipes]
          Length = 273

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+ +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 68  HGTTTLSFKFKHGVIVAVDSRASTGSYIATCEYNKVIEINPY-LLGTMSGSAADCKYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 127 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDN 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+ +  A     Y+   + + 
Sbjct: 187 GNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMY 246

Query: 184 TLKVG 188
            ++  
Sbjct: 247 HIQED 251


>gi|62531133|gb|AAH92728.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Danio rerio]
 gi|182891494|gb|AAI64627.1| Psmb7 protein [Danio rerio]
          Length = 277

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 14/196 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           +G    A +   TTI  +     VV+  D + + G  V   N  K+  +       G AG
Sbjct: 32  LGFSSPAARKTGTTICGIVYKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AG 90

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTI 117
           ++AD     + +   LE +     R       +  + + L   +  I  A      D T 
Sbjct: 91  TAADTEMTTQIISSNLELHSLSTGRLPRVATANRMLKQMLFRYQGYIGAALVLGGVDCTG 150

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI-- 172
             + +        +   + +GSG   A++A             A+ + R A  IAA I  
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAAFEDRYRPDMEEEDAKSLVRDA--IAAGIFN 208

Query: 173 CVYTNHNIVLETLKVG 188
            + +  NI +  +  G
Sbjct: 209 DLGSGSNIDVCVITKG 224


>gi|149627583|ref|XP_001519245.1| PREDICTED: similar to RIKEN cDNA 5830406J20 gene [Ornithorhynchus
           anatinus]
          Length = 295

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    V+ A D + S GQ V    + KV  + +  ++   +G+SAD      
Sbjct: 47  HGTTTLAFRFRHGVIAAADTRSSCGQYVACPASLKVIPVHRH-LLGTTSGTSADCAAWFR 105

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L+++L     +  R          +   L   + + L         D++   +     D
Sbjct: 106 VLQRELRLRALREGRLPSVAGAARLLAGMLHRYQGLDLCVATVLCGWDRSGPALFYVYSD 165

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                  V ++GSG  YA               E   +AR+A++ AA    Y+  ++ L
Sbjct: 166 GTLLPGTVFSVGSGSPYAYGVLDRGYRYDMEPHEAYALARQAVAHAARRDAYSGGSVDL 224


>gi|315518891|dbj|BAJ51778.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 238

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGNYLASNDANKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYKLRNNHRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDHN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|294811696|ref|ZP_06770339.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
 gi|326440120|ref|ZP_08214854.1| proteasome subunit beta [Streptomyces clavuligerus ATCC 27064]
 gi|294324295|gb|EFG05938.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
          Length = 258

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 29  HGTTIVAATYPGGVVLAGDRRATMGNMIAQRDMEKVFPADEYSAV-GIAGTAGLAVEMVK 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +            K  R+   +R    M +     + L              
Sbjct: 88  LFQLELEHFEKVEGTQLSLEGKANRLSAMIRGNLGMAMQGLAVVPLFAGYDVDREKGRIF 147

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E G  A GSG  +A  + + L     + E+   +  +A+  AAD    T 
Sbjct: 148 SYDVTGGRSEEQGFAATGSGSVFARGSLKKLYRPDLTEEQATTLVVQALYDAADDDSATG 207

Query: 178 H 178
            
Sbjct: 208 G 208


>gi|220912674|ref|YP_002487983.1| 20S proteasome A and subunit betas [Arthrobacter chlorophenolicus
           A6]
 gi|302595819|sp|B8H8L6|PSB_ARTCA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|219859552|gb|ACL39894.1| 20S proteasome A and B subunits [Arthrobacter chlorophenolicus A6]
          Length = 273

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 17/188 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +  +G V++AGD + ++G  +   +  KV    + +++ G AG++  A  L  
Sbjct: 49  HATTIVAMSYNGGVLMAGDRRATMGNVIASRHIEKVFPADRYSVL-GIAGTAGIAIDLTR 107

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y            K  R+   +R    + +     + L              
Sbjct: 108 LFQVELEHYEKIEGTLLSLEGKANRLGAMIRGNLPLAMQGLAVVPLFAGFDTSAGVGRLF 167

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E+    +GSG  +A  A + L     SAEE   +A +A+  AAD    T 
Sbjct: 168 SYDVTGGRYEEHEHHTVGSGSVFARGALKKLWRPNLSAEEAVAVAIEALFDAADDDSATG 227

Query: 178 HNIVLETL 185
               +  L
Sbjct: 228 GPDTVRKL 235


>gi|21220140|ref|NP_625919.1| 20S proteasome beta-subunit precursor [Streptomyces coelicolor
           A3(2)]
 gi|289772643|ref|ZP_06532021.1| 20S proteasome beta-subunit [Streptomyces lividans TK24]
 gi|81415865|sp|Q7AKQ5|PSB_STRCO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|3676748|gb|AAC64284.1| 20S proteasome beta-subunit precursor [Streptomyces coelicolor
           A3(2)]
 gi|6119686|emb|CAB59497.1| 20S proteasome beta-subunit precursor [Streptomyces coelicolor
           A3(2)]
 gi|289702842|gb|EFD70271.1| 20S proteasome beta-subunit [Streptomyces lividans TK24]
          Length = 281

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE---- 129
             + +LE +            K  R+   +R+   M +     + L      D       
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRGRGRIF 170

Query: 130 ---------PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E      GSG  +A  A + L     + E+   +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEERHFATTGSGSVFARGAMKKLFRDDLTEEQATTLVVQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|307330758|ref|ZP_07609894.1| 20S proteasome A and B subunits [Streptomyces violaceusniger Tu
           4113]
 gi|306883561|gb|EFN14611.1| 20S proteasome A and B subunits [Streptomyces violaceusniger Tu
           4113]
          Length = 281

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 19/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAVSFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGIAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------- 120
             + +LE +            K  R+   +R    M +     + L              
Sbjct: 111 LFQLELEHFEKVEGTVLSLEGKANRLSTMIRGNLGMAMQGLAVVPLFAGWDVDREKGRIF 170

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYT 176
                G   E      A GSG  +A  A + L     + E+ A    +A+  AAD    T
Sbjct: 171 SYDVTGGRSEERG-FAATGSGSMFARGALKKLYRQDLTEEQAATAVLQALYDAADEDSAT 229

Query: 177 NH 178
             
Sbjct: 230 GG 231


>gi|195380597|ref|XP_002049057.1| GJ20967 [Drosophila virilis]
 gi|194143854|gb|EDW60250.1| GJ20967 [Drosophila virilis]
          Length = 312

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 14/185 (7%)

Query: 7   KHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           +H  V+M   H TT L  +  G +V+  D + + G+ +     +K+  L    ++   AG
Sbjct: 60  EHCKVRMECDHGTTTLGFKYQGGIVLCADSRATSGEYIGSQTMKKIVELNSY-MLGTLAG 118

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L ++   +  +  R     A    M       + M L+        D  
Sbjct: 119 GAADCVYWDRVLARECRLHELRYKRRITVDAAARMMCNISTQYKGMGLVMGMMLAGCDDE 178

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +I    D +     V ++GSG  YAL           +   A ++AR+A+  A    
Sbjct: 179 GCKLIYVDSDGMRSHGSVFSVGSGSPYALGVLDTGYRWDLTTDEAFDLARRAIYHATSKD 238

Query: 174 VYTNH 178
            Y+  
Sbjct: 239 AYSGG 243


>gi|194758026|ref|XP_001961263.1| GF13778 [Drosophila ananassae]
 gi|190622561|gb|EDV38085.1| GF13778 [Drosophila ananassae]
          Length = 284

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKYKGGVILAVDSRATGGQYIGSQTMKKIVEI-NQFLLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + ++GSG  +A     +          A+E+ R+A+  A     Y+   I +
Sbjct: 191 GSRTPGNLFSVGSGSLFAYGVLDSGYHWDLEDDVAQELGRRAIYHATFRDAYSGGIIRV 249


>gi|119962637|ref|YP_947919.1| 20S proteasome beta-subunit precursor [Arthrobacter aurescens TC1]
 gi|119949496|gb|ABM08407.1| putative 20S proteasome beta-subunit precursor [Arthrobacter
           aurescens TC1]
          Length = 324

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 17/185 (9%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               HATTI+ +   G V++AGD + ++G  +   +  KV    + +++ G AG++  A 
Sbjct: 96  PSSPHATTIVALTYAGGVLMAGDRRATMGNIIASRHIEKVFPADEYSVL-GIAGTAGLAI 154

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM----- 124
            +    + +LE Y          + K  R+   +R    M +     I L          
Sbjct: 155 DITRLFQVELEHYEKIEGTLLSLVGKANRLGAMIRGNLPMAMQGMAVIPLFAGFDQVAGV 214

Query: 125 --------GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
                         E    ++GSG  +A  A + L     S E+   +A +A+  AAD  
Sbjct: 215 GRLFSYDVTGGRYEELEHHSVGSGSVFARGALKKLWKPNLSEEDAISVAVEALYDAADDD 274

Query: 174 VYTNH 178
             T  
Sbjct: 275 SATGG 279


>gi|219567022|dbj|BAH05029.1| proteasome subunit, beta type 8 [Xenopoecilus sarasinorum]
          Length = 275

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSIGSMICGWDKEGPGLYYVDEN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 189 GTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 247


>gi|195122572|ref|XP_002005785.1| GI18886 [Drosophila mojavensis]
 gi|193910853|gb|EDW09720.1| GI18886 [Drosophila mojavensis]
          Length = 279

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + GQ +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKYQGGVILAVDSRATGGQYIGSQSMKKIVEI-NQFLLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  V ++GSG  YA     +          A+E+ R+A+  A     Y+   I +
Sbjct: 191 GSRTPGNVFSVGSGSIYAFGVLDSGYHWDLEDAAAQELGRRAIYHATFRDAYSGGIIRV 249


>gi|225703298|gb|ACO07495.1| Proteasome subunit beta type 8 precursor [Oncorhynchus mykiss]
          Length = 276

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  V     +KV  +    ++   +GS+AD      
Sbjct: 71  HGTTTLAFKFQHGVMVAVDSRASAGSYVSTQMFKKVIEINPF-LLETMSGSAADCVYWER 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   + N   M L         DK    +     +
Sbjct: 130 VLAKECRIYKLRNKERISVSAASKLLANMVVNYRGMGLSMGTMICGWDKKGPGLYYVDDN 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
            L     + + GSG +YA     +      S   A ++A++A+  A     Y+   + +
Sbjct: 190 GLGLCGNMFSTGSGNTYAYGVMDSGYRYDLSVPEAYDLAQRAIFHATHRDAYSGGTVNM 248


>gi|18124200|gb|AAL59861.1|AF363582_1 proteasome beta-subunit LMP7-like protein [Heterodontus francisci]
          Length = 285

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 62/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G        +KV  +    ++   +GS+AD      
Sbjct: 69  HGTTTLAFKFQHGVMVAVDSRASAGSYFDTQMFKKVIEINPY-LLGTMSGSAADCVYWER 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K    Y  +  +     A    +   +   + M L         D     +    G+
Sbjct: 128 MLAKHCRIYKLRNKKRISVSAASKLLANMVSEYKGMGLSMGTMICGWDDKGPGLYYVSGN 187

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
            L     + + GSG  YA     +      S   A  +A++A+  A     Y+   + +
Sbjct: 188 GLRLAGNMFSTGSGSIYAYGVMDSGYKYDLSVQDAYNLAQRAIYHATHRDAYSGGTVNM 246


>gi|219567048|dbj|BAH05042.1| proteasome subunit, beta type 8 [Oryzias javanicus]
          Length = 238

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
 gi|121697945|sp|Q2NI68|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
          Length = 205

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 8/189 (4%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            +    M  TT +       VV+A + + ++G  V   NA K+ ++    I A  AG+ +
Sbjct: 1   MNQTENMEGTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQIDD-KIGATIAGTVS 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL----RNLEAMILIADKTITLVIT 122
            A +L++ L+ ++  Y  +  +     A        L      ++ ++   DK    + T
Sbjct: 60  HAQSLMDILKAEISLYKLRNEKDMSIDALAVLTSNILKSRPYYVQTILAGVDKDGAKLYT 119

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                    +   + GSG  YA        +   + EE   IA KA++ A +  VY+ +N
Sbjct: 120 LDPSGSYIPDTFTSTGSGSPYAFGVLEDRYNEDITTEEGKKIAIKAITSAMERDVYSGNN 179

Query: 180 IVLETLKVG 188
             L  +   
Sbjct: 180 YRLGVITKD 188


>gi|15231544|ref|NP_189265.1| 20S proteasome beta subunit E, putative [Arabidopsis thaliana]
 gi|75273433|sp|Q9LIP2|PSB5B_ARATH RecName: Full=Proteasome subunit beta type-5-B; AltName: Full=20S
           proteasome beta subunit E-2; AltName: Full=Proteasome
           epsilon-2 chain; Flags: Precursor
 gi|16612308|gb|AAL27514.1|AF439846_1 AT3g26340/F20C19_6 [Arabidopsis thaliana]
 gi|9294292|dbj|BAB02194.1| proteasome epsilon chain precursor [Arabidopsis thaliana]
 gi|21553804|gb|AAM62897.1| 26S proteasome beta subunit, putative [Arabidopsis thaliana]
 gi|21928101|gb|AAM78079.1| AT3g26340/F20C19_6 [Arabidopsis thaliana]
 gi|332643626|gb|AEE77147.1| proteasome subunit beta type-5-B [Arabidopsis thaliana]
          Length = 273

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 56  KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 115 NLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNE 174

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
               +    ++GSG  YA     +      S   A E+AR+++  A      +  
Sbjct: 175 GGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGG 229


>gi|219567046|dbj|BAH05041.1| proteasome subunit, beta type 8 [Oryzias javanicus]
          Length = 238

 Score =  127 bits (319), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|195027377|ref|XP_001986559.1| GH20460 [Drosophila grimshawi]
 gi|193902559|gb|EDW01426.1| GH20460 [Drosophila grimshawi]
          Length = 280

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKYQGGVILAVDSRATGGQYIGSQTMKKIVEI-NQFLLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLAKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                  V ++GSG  +A     +          A+E+ R+A+  A     Y+   + +
Sbjct: 191 GSRTPGNVFSVGSGSIFAFGVLDSGYHWDLKDTEAQELGRRAIYHATFRDAYSGGIVRV 249


>gi|3114280|pdb|1RYP|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114294|pdb|1RYP|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|14488816|pdb|1FNT|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488830|pdb|1FNT|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765710|pdb|1Z7Q|L Chain L, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765724|pdb|1Z7Q|Z Chain Z, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|298508233|pdb|1VSY|L Chain L, Proteasome Activator Complex
 gi|298508247|pdb|1VSY|Z Chain Z, Proteasome Activator Complex
 gi|298508449|pdb|3L5Q|P Chain P, Proteasome Activator Complex
 gi|298508463|pdb|3L5Q|2 Chain 2, Proteasome Activator Complex
          Length = 212

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 62/178 (34%), Gaps = 12/178 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT L  R  G +++A D + + G  V     ++V  +    ++   AG +AD       L
Sbjct: 1   TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPF-LLGTMAGGAADCQFWETWL 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGDV 127
             +   +  +        A    +   +   +   L           K    +     D 
Sbjct: 60  GSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDG 119

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
              +  +  +GSG ++A     +      S E+   + ++++  AA    Y+  ++ L
Sbjct: 120 TRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 177


>gi|11514002|pdb|1G0U|K Chain K, A Gated Channel Into The Proteasome Core Particle
 gi|11514016|pdb|1G0U|Y Chain Y, A Gated Channel Into The Proteasome Core Particle
 gi|20150387|pdb|1JD2|K Chain K, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150394|pdb|1JD2|R Chain R, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|93279378|pdb|2F16|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279392|pdb|2F16|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279666|pdb|2FNY|K Chain K, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279680|pdb|2FNY|Y Chain Y, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032212|pdb|2FAK|K Chain K, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032226|pdb|2FAK|Y Chain Y, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490853|pdb|2GPL|K Chain K, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490867|pdb|2GPL|Y Chain Y, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|178847470|pdb|2ZCY|K Chain K, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847484|pdb|2ZCY|Y Chain Y, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847512|pdb|3BDM|K Chain K, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847526|pdb|3BDM|Y Chain Y, Yeast 20s Proteasome:glidobactin A-Complex
 gi|190016377|pdb|3D29|K Chain K, Proteasome Inhibition By Fellutamide B
 gi|190016391|pdb|3D29|Y Chain Y, Proteasome Inhibition By Fellutamide B
 gi|197725331|pdb|3E47|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725345|pdb|3E47|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939222|pdb|3DY3|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939236|pdb|3DY3|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939250|pdb|3DY4|K Chain K, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939264|pdb|3DY4|Y Chain Y, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828247|pdb|3GPJ|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828261|pdb|3GPJ|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588331|pdb|3GPT|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588345|pdb|3GPT|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588359|pdb|3GPW|K Chain K, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588373|pdb|3GPW|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588553|pdb|3HYE|K Chain K, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588567|pdb|3HYE|Y Chain Y, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|330689391|pdb|3MG4|K Chain K, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689405|pdb|3MG4|Y Chain Y, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 212

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 12/178 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT L  R  G +++A D + + G  V     +KV  +    ++   AG +AD       L
Sbjct: 1   TTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWETWL 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGDV 127
             +   +  +        A    +   +   +   L           K    +     D 
Sbjct: 60  GSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDG 119

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
              +  +  +GSG ++A     +      S E+   + ++++  AA    Y+  ++ L
Sbjct: 120 TRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 177


>gi|329939090|ref|ZP_08288464.1| 20S proteasome subunit beta precursor [Streptomyces
           griseoaurantiacus M045]
 gi|329301975|gb|EGG45868.1| 20S proteasome subunit beta precursor [Streptomyces
           griseoaurantiacus M045]
          Length = 281

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +            K  R+   +R+   M +     + L              
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDRGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E    A GSG  +A  A + L     + E+   +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEETNYAATGSGSVFARGAMKKLFREDLTEEQATTLVVQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|315518855|dbj|BAJ51756.1| proteasome subunit, beta type 8 [Oryzias celebensis]
 gi|315518866|dbj|BAJ51763.1| proteasome subunit, beta type 8 [Oryzias matanensis]
 gi|315518875|dbj|BAJ51769.1| proteasome subunit, beta type 8 [Oryzias marmoratus]
          Length = 273

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +  +    V++A D + S G  V      KV  +    ++   +GS+AD      
Sbjct: 68  HGTTTMAFKFKHGVIVAVDSRASTGSYVDTCEYNKVIEINPY-LLGTMSGSAADCKYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 127 LLAKECRLYRLRNSHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDN 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+A+  A     Y+   + + 
Sbjct: 187 GNRLSGRMFSTGSGRNYAYGVLDSGYKEDMTVEEAYELGRRAIVHATHRDSYSGGVVNMY 246

Query: 184 TLKVG 188
            ++  
Sbjct: 247 HIQED 251


>gi|218680180|ref|ZP_03528077.1| ATP-dependent protease peptidase subunit [Rhizobium etli CIAT 894]
          Length = 138

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 110/137 (80%), Positives = 126/137 (91%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121

Query: 136 AIGSGGSYALSAARALM 152
           AIGSGG++A +AARALM
Sbjct: 122 AIGSGGNFAFAAARALM 138


>gi|242011050|ref|XP_002426270.1| proteasome subunit beta type 5 precursor, putative [Pediculus
           humanus corporis]
 gi|212510333|gb|EEB13532.1| proteasome subunit beta type 5 precursor, putative [Pediculus
           humanus corporis]
          Length = 271

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    V++A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 62  HGTTTLGFRFKNGVILAVDSRATGGQCIGSQTMKKIVEINNY-LLGTLAGGAADCVYWDR 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M   + N + M L         DK    +     D
Sbjct: 121 VLAKQCRMFELRNHERISVAAASKLMTNMVYNYKGMGLSMGMMIAGWDKRGASLYYVSDD 180

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                  V ++GSG  YA                A ++A++++  A     Y+   I + 
Sbjct: 181 GTRTSGNVFSVGSGSIYAFGVLDTGYKWDLEDKEAYDLAQRSIYHATYRDAYSGGIIRVY 240

Query: 184 TLK 186
            +K
Sbjct: 241 HIK 243


>gi|117928395|ref|YP_872946.1| proteasome subunit beta [Acidothermus cellulolyticus 11B]
 gi|302595815|sp|A0LU50|PSB_ACIC1 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|117648858|gb|ABK52960.1| proteasome endopeptidase complex, beta component [Acidothermus
           cellulolyticus 11B]
          Length = 290

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 72/196 (36%), Gaps = 22/196 (11%)

Query: 4   MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           M       ++ H TTI+ V   G VV+AGD + ++G  + + +  KV +  + +   G A
Sbjct: 46  MPAGGQPPEVPHGTTIVAVAYQGGVVMAGDRRATMGNVIAQRDIEKVFQTDEHS-CVGIA 104

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           GS+  A  ++   + +LE Y      +     K  R+   +R    M L     + L   
Sbjct: 105 GSAGIALEVVRLFQVELEHYEKLQGTTLSLEGKANRLAMMIRANLPMALQGLAVVPLFAG 164

Query: 123 GMG-----------------DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIA 162
                                    E+   A+GSG ++A  A + L         A    
Sbjct: 165 YDLFADDPQRAGRIFSFDVTGGRYEEHSFHAVGSGSTFARGALKKLFRDDFDEPHAVRTC 224

Query: 163 RKAMSIAADICVYTNH 178
            +A+  AAD    T  
Sbjct: 225 IEALYDAADDDSATGG 240


>gi|282864338|ref|ZP_06273394.1| 20S proteasome A and B subunits [Streptomyces sp. ACTE]
 gi|282560825|gb|EFB66371.1| 20S proteasome A and B subunits [Streptomyces sp. ACTE]
          Length = 258

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 19/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + + +KV    + + + G AG++  A  +++
Sbjct: 29  HGTTIVAATFPGGVVLAGDRRATMGNMIAQRDMQKVFPADEYSAV-GIAGTAGLAIEMVK 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------- 120
             + +LE +      +     K  R+   +R   +M +     + L              
Sbjct: 88  LFQLELEHFEKVEGTTLSLEGKANRLSTMIRGNLSMAMQGLAVVPLFAGFDVDREKGRIF 147

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
                G   E +    A GSG  +A  + + L     + E+   +  +A+  AAD    T
Sbjct: 148 SYDVTGGRSEEQG-YAATGSGSLFARGSMKKLYRDDLTEEQALTLVVQALYDAADDDSAT 206

Query: 177 NH 178
             
Sbjct: 207 GG 208


>gi|323649964|gb|ADX97068.1| proteasome subunit beta type-7 precursor [Perca flavescens]
          Length = 238

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 32  GTTICGVVFKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R       +  + + L   +  I  A      D     + +      
Sbjct: 91  ISSNLELHALSTGRLPRVATANRMLKQMLFRYQGYIGAALVLGGVDCNGPHLYSIYPHGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++              A+++ R A  IAA I   + +  NI L 
Sbjct: 151 TDKLPYVTMGSGSLAAMAVFEDRYKPDMEEDEAKQLVRDA--IAAGIFNDLGSGSNIDLS 208

Query: 184 TLKVG 188
            +  G
Sbjct: 209 VITKG 213


>gi|115394802|gb|ABI97195.1| HA2B [Sus scrofa]
          Length = 276

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G++   ++M H TT L  +    V++A D + S G  +      KV  +    ++   +G
Sbjct: 61  GERDVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPY-LLGTMSG 119

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   Y  +        A    +   + +   M L         DK 
Sbjct: 120 CAADCHYWERLLAKECRLYYLRNGDRISLSAASKLLSNMMYHYRGMGLSMGSMICGWDKK 179

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADIC 173
              +     +       + + GSG +YA     +          A ++ R+A+  A    
Sbjct: 180 GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLIIEYAYDLGRRAIVHATHRD 239

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 240 SYSGGVVNM 248


>gi|195057410|ref|XP_001995254.1| GH23050 [Drosophila grimshawi]
 gi|193899460|gb|EDV98326.1| GH23050 [Drosophila grimshawi]
          Length = 315

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 14/185 (7%)

Query: 7   KHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           +H  ++M   H TT L  +  G VV+  D + + GQ +     RK+  L    ++   AG
Sbjct: 60  RHCKLRMELEHGTTTLGFKYQGGVVLCADSRATSGQYIGSQTMRKIVELNNY-MLGTLAG 118

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L ++   +  +  R  +  A    M       + M L+        D  
Sbjct: 119 GAADCVYWDRVLARECRLHELRYKRRIMVDAAARMMCNICAEYKGMGLVMGMMLAGCDDE 178

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +I    + +     V ++GSG +YAL           + EE   +AR+A+  A    
Sbjct: 179 GCKLIYVDSEGMRSHGSVFSVGSGSTYALGVLDTGYRWDLTDEEAYDLARRAIYHATRKD 238

Query: 174 VYTNH 178
            Y+  
Sbjct: 239 AYSGG 243


>gi|125811046|ref|XP_001361733.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
 gi|54636909|gb|EAL26312.1| GA11556 [Drosophila pseudoobscura pseudoobscura]
          Length = 279

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKYQGGVILAVDSRATGGQYIGSQTMKKIVEINDF-LLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     +
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                  + ++GSG  +A     +          A+++ ++A+  A     Y+   I +
Sbjct: 191 GSRTPGNLFSVGSGSLFAYGVLDSGYRWDLQDKEAQDLGQRAIYHATFRDAYSGGIIRV 249


>gi|302561549|ref|ZP_07313891.1| 20S proteasome, beta subunit [Streptomyces griseoflavus Tu4000]
 gi|302479167|gb|EFL42260.1| 20S proteasome, beta subunit [Streptomyces griseoflavus Tu4000]
          Length = 281

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 19/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------------DKTITL 119
             + +LE +            K  R+   +R+   M +                DK    
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDKGRIF 170

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
                G   E +    A GSG  +A  A + L     S   A  +  +A+  AAD    T
Sbjct: 171 SYDVTGGRSEEQG-YAATGSGSIFARGAMKKLFRDDLSESEATTLVVQALYDAADDDSAT 229

Query: 177 NH 178
             
Sbjct: 230 GG 231


>gi|291450471|ref|ZP_06589861.1| 20S proteasome beta-subunit [Streptomyces albus J1074]
 gi|291353420|gb|EFE80322.1| 20S proteasome beta-subunit [Streptomyces albus J1074]
          Length = 281

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVASTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEHSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +      +     K  R+   +R+   M +     + L +            
Sbjct: 111 LFQLELEHFEKVEGAALSLEGKANRLSTMIRSNLGMAMQGLAVVPLFVGYDVDRERGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E+G  A GSG ++A  + + L     + E+   +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEEHGYAATGSGSTFARGSMKKLYRDDLTEEQATTLVVQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|291440639|ref|ZP_06580029.1| 20S proteasome beta-subunit [Streptomyces ghanaensis ATCC 14672]
 gi|291343534|gb|EFE70490.1| 20S proteasome beta-subunit [Streptomyces ghanaensis ATCC 14672]
          Length = 281

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +            K  R+   +R+   M +     + L              
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDQGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E G  A GSG  +A  A + L     S  E   +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEEQGYAATGSGSIFARGAMKKLFRDDLSEAEATTLVVQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|256788748|ref|ZP_05527179.1| 20S proteasome beta-subunit precursor [Streptomyces lividans TK24]
          Length = 258

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 29  HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE---- 129
             + +LE +            K  R+   +R+   M +     + L      D       
Sbjct: 88  LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRGRGRIF 147

Query: 130 ---------PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E      GSG  +A  A + L     + E+   +  +A+  AAD    T 
Sbjct: 148 SYDVTGGRSEERHFATTGSGSVFARGAMKKLFRDDLTEEQATTLVVQALYDAADDDSATG 207

Query: 178 H 178
            
Sbjct: 208 G 208


>gi|225192961|dbj|BAH29693.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225192990|dbj|BAH29623.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193005|dbj|BAH29633.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193020|dbj|BAH29643.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193071|dbj|BAH29677.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 250

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+ +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 68  HGTTTLSFKFKHGVIVAVDSRASTGSYIATCEYNKVIEINPY-LLGTMSGSAADCKYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 127 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDN 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+ +  A     Y+   + + 
Sbjct: 187 GNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMY 246

Query: 184 TLK 186
            ++
Sbjct: 247 HIQ 249


>gi|291403559|ref|XP_002717947.1| PREDICTED: proteasome beta 11 subunit [Oryctolagus cuniculus]
          Length = 303

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 11/187 (5%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
             H     H TT L  R    V+ A D + S G  V    +RK+  + +  ++   +G+S
Sbjct: 40  QTHGPQLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKIIPVHQH-LLGTTSGTS 98

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD  T    L+++L     +  +          +   L     + L         D++  
Sbjct: 99  ADCVTWYRVLQRELRLRALREGQLPSVAGAAKLLSVMLSRYRGLDLCVATALCGWDRSGP 158

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVY 175
            +     D    +  + ++GSG  YA                A  +AR A++ A     Y
Sbjct: 159 ALFYVYSDGTWLQGDIFSVGSGSPYAYGVLDRGYRYDMGIQEAYALARCAVAHATHRDAY 218

Query: 176 TNHNIVL 182
           +  ++ L
Sbjct: 219 SGGSVDL 225


>gi|20130281|ref|NP_611776.1| proteasome beta5R subunit [Drosophila melanogaster]
 gi|7291554|gb|AAF46978.1| proteasome beta5R subunit [Drosophila melanogaster]
 gi|201066095|gb|ACH92457.1| FI08137p [Drosophila melanogaster]
          Length = 315

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 14/195 (7%)

Query: 7   KHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            H  ++M   H TT L  +  G V++  D + + GQ +     RK+  L    ++   AG
Sbjct: 60  SHCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDY-MLGTLAG 118

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   +  +  +          +       + M L+        D  
Sbjct: 119 GAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDE 178

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +I    + +     V ++GSG  YAL           S   A ++AR+A+  A    
Sbjct: 179 GPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYHATSKD 238

Query: 174 VYTNHNIVLETLKVG 188
            Y+   + L  +   
Sbjct: 239 AYSGGIVRLYHIHSE 253


>gi|284031156|ref|YP_003381087.1| 20S proteasome subunits A and B [Kribbella flavida DSM 17836]
 gi|302595740|sp|D2Q4H4|PSB_KRIFD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|283810449|gb|ADB32288.1| 20S proteasome A and B subunits [Kribbella flavida DSM 17836]
          Length = 279

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+    DG VV+AGD + ++G  + + +  KV    + +   G AGS+  A  ++ 
Sbjct: 50  HGTTIVAATFDGGVVMAGDRRATMGNIIAQRDIEKVFPADEYS-CVGIAGSAGLAIEMVR 108

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y      +     K  R+   +R   AM +     + L      D+      
Sbjct: 109 LFQVELEHYEKLEGTTLSLDGKANRLSALIRGNLAMAMQGLAVVPLFAGYDHDISGGRIF 168

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTN 177
                     E    ++GSG  +A  + + L     SA E      +A+  AAD    T 
Sbjct: 169 SYDPTGGRYEEQAFHSVGSGSLFARGSLKKLYRESMSAAECVTATIQALYDAADDDSATG 228

Query: 178 H 178
            
Sbjct: 229 G 229


>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           infernus ME]
 gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           infernus ME]
          Length = 205

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 12/189 (6%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++M  TT + +     V++A D + SLG  +   NA+K+ ++     +   AGS  DA +
Sbjct: 1   MEMKGTTTIGLICKDAVILAADKRASLGNLIADKNAKKIYKIDDNLAL-TIAGSVGDAQS 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR--NLEAMILIA-----DKTITLVITG 123
           L+  L  + + Y  +  +    LA    +   L        ++       D+    + + 
Sbjct: 60  LVRYLTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGFDEKGFKLYSL 119

Query: 124 MG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                +  E    A GSG   A     A        ++   +  KA+  A +   ++ + 
Sbjct: 120 DPLGGVNEEKDFTATGSGSPIAYGVLEAGYKKDMDYKKGVSLVLKALQAAMERDTFSGNG 179

Query: 180 IVLETLKVG 188
           + L  +   
Sbjct: 180 VSLALITKD 188


>gi|45383366|ref|NP_989728.1| proteasome subunit beta type-7 [Gallus gallus]
 gi|30268674|dbj|BAC76008.1| proteasome subunit Z [Gallus gallus]
          Length = 277

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVFKDGVVLGADTRATEGMVVADKNCSKIHYISSNIYCCG-AGTAADTEMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 IASNLELHALSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   + R A  IAA I   + +  NI + 
Sbjct: 162 TDKLPYVTMGSGSLAAMAIFEDKYKPDMEEEEAKQLVRDA--IAAGIYNDLGSGSNIDIC 219

Query: 184 TLKVG 188
            +   
Sbjct: 220 VISKN 224


>gi|328881285|emb|CCA54524.1| Proteasome subunit beta , bacterial [Streptomyces venezuelae ATCC
           10712]
          Length = 279

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 19/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 50  HGTTIVAATFAGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 108

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------- 120
             + +LE +      +     K  R+   +R    M +     + L              
Sbjct: 109 LFQLELEHFEKVEGVTLSLEGKANRLSTMIRGNLGMAMQGLAVVPLFAGWDEGKEKGRIF 168

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
                G   E +    A GSG  +A  + + L     + E+   +  +A+  AAD    T
Sbjct: 169 SYDVTGGRSEEQG-YAATGSGSIFARGSMKKLYRADLTEEQATTLVVQALYDAADDDSAT 227

Query: 177 NH 178
             
Sbjct: 228 GG 229


>gi|126278096|ref|XP_001379947.1| PREDICTED: similar to RIKEN cDNA 5830406J20 gene [Monodelphis
           domestica]
          Length = 261

 Score =  126 bits (317), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 11/187 (5%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                   H TT L  R    V+ A D + S    V   +++KV  + +  +I   +G+S
Sbjct: 38  QTQGPDLAHGTTTLAFRFQHGVIAAADTRSSCNNYVACPSSQKVIPVHQH-LIGTTSGTS 96

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD  T    L+++L     +  +          +   L +   + L         D+   
Sbjct: 97  ADCATWYRILQRELRLRALREGQLPSVAGAAKLLSSMLFHYRGLGLCVATALCGWDQAGP 156

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +     D       V ++GSG  YA            + EE   +AR+A++ A     Y
Sbjct: 157 ALFYVYSDGTLLSGDVFSVGSGSPYAYGVMDRGYRYDMTIEEAYTLARQAVAHATRRDAY 216

Query: 176 TNHNIVL 182
           +  ++ L
Sbjct: 217 SGGSVDL 223


>gi|225192934|dbj|BAH29709.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225192940|dbj|BAH29705.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 250

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+ +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 68  HGTTTLSFKFKHGVIVAVDSRASTGSYIATCEYNKVIEINPY-LLGTMSGSAADCKYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 127 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDN 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+ +  A     Y+   + + 
Sbjct: 187 GNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMY 246

Query: 184 TLK 186
            ++
Sbjct: 247 HIQ 249


>gi|219567042|dbj|BAH05039.1| proteasome subunit, beta type 8 [Oryzias celebensis]
          Length = 238

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +  +    V++A D + S G  V      KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTMAFKFKHGVIVAVDSRASTGSYVDTCEYNKVIEINPY-LLGTMSGSAADCKYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNSHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+A+  A     Y+   + + 
Sbjct: 152 GNRLSGRMFSTGSGRNYAYGVLDSGYKEDMTVEEAYELGRRAIVHATHRDSYSGGVVNMY 211

Query: 184 TLKVG 188
            ++  
Sbjct: 212 HIQED 216


>gi|18447060|gb|AAL68121.1| AT21741p [Drosophila melanogaster]
          Length = 315

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 14/195 (7%)

Query: 7   KHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            H  ++M   H TT L  +  G V++  D + + GQ +     RK+  L    ++   AG
Sbjct: 60  SHCGIRMDFDHGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDY-MLGTLAG 118

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
            +AD       L K+   +  +  +          +       + M L+        D  
Sbjct: 119 GAADCVYWDRVLAKECRLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDE 178

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +I    + +     V ++GSG  YAL           S   A ++AR+A+  A    
Sbjct: 179 GPKLIYVDSEGMRSHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYHATSKD 238

Query: 174 VYTNHNIVLETLKVG 188
            Y+   + L  +   
Sbjct: 239 AYSGGIVRLYHIHSE 253


>gi|229367710|gb|ACQ58835.1| Proteasome subunit beta type-8 precursor [Anoplopoma fimbria]
          Length = 275

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFKYGVIVAVDSRASAGRYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +  +     A    +   +     M L         DK    +     +
Sbjct: 129 LLAKECRLYRLRNNQRISVAAASKLLCNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDE 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+ R+ ++ A     Y+   + +
Sbjct: 189 GKRLSGRMFSTGCGSSYAYGVVDSGYRDDMTVEEAYELGRRGIAHATHRDAYSGGVVNM 247


>gi|315518883|dbj|BAJ51774.1| proteasome subunit, beta type 8 [Oryzias dancena]
          Length = 238

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 152 GTRLSGRMFSTGCGNGYAYGVVDSGYEEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 210


>gi|2055313|dbj|BAA19767.1| LMP7 [Oryzias latipes]
          Length = 225

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+ +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 20  HGTTTLSFKFKHGVIVAVDSRASTGSYIATCEYNKVIEINPY-LLGTMSGSAADCKYWER 78

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 79  LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDN 138

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+ +  A     Y+   + + 
Sbjct: 139 GNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMY 198

Query: 184 TLKVG 188
            ++  
Sbjct: 199 HIQED 203


>gi|323450997|gb|EGB06876.1| hypothetical protein AURANDRAFT_28593 [Aureococcus anophagefferens]
          Length = 287

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 12/184 (6%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           D H  VK    TT L  + +G V+I+ D + ++G  +     +KV  +    ++   AG 
Sbjct: 57  DHHQDVKFAKGTTTLAFKFNGGVIISVDSRSTMGPYIASQTVKKVIEINPF-LLGTMAGG 115

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTI 117
           +AD       L  +   +  +  R     A    +   + +          M+   D+T 
Sbjct: 116 AADCSFWERNLGTQCRMFELRNKRRVSVAAASKMLANTMYSYRGRGLSMGTMVCGWDETG 175

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
             +     D       V  +GSG +YA     + +    +   A ++ R+A++ AA    
Sbjct: 176 PQLYYVDDDGTRLHGNVFCVGSGSTYAYGVIDSNLRDDLTVPEAIDLGRRAIAGAAHRDA 235

Query: 175 YTNH 178
           Y+  
Sbjct: 236 YSGG 239


>gi|219567054|dbj|BAH05045.1| proteasome subunit, beta type 8 [Oryzias javanicus]
          Length = 243

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 38  HGTTTLAFKFRHGVIVAVDSRASAGKYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 96

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 97  LLAKECRLYRLRNNHRISVAAASKLLSNMMLGYRGMGLSMGSMICGWDKEGPGLYYVDDN 156

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G  YA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 157 GTRLSGRMFSTGCGNGYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 215


>gi|218552|dbj|BAA02403.1| proteasome subunit pts1+ [Schizosaccharomyces pombe]
 gi|742350|prf||2009376A proteasome:SUBUNIT=pts1
          Length = 215

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    +V+  D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 3   HGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPY-LLGTLAGGAADCQFWET 61

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGD 126
            L  +   +  +        A    +     + +   L     +         +     D
Sbjct: 62  VLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSD 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
               +  + ++GSG ++A     +      S +E   +A++++  A     Y+  ++ L 
Sbjct: 122 GTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDAYSGGSVNLY 181

Query: 184 TLKVG 188
            +   
Sbjct: 182 HIDEN 186


>gi|225192958|dbj|BAH29695.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 250

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+ +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 68  HGTTTLSFKFKHGVIVAVDSRASTGSYIDTCEYNKVIEINPY-LLGTMSGSAADCKYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 127 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDN 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+ +  A     Y+   + + 
Sbjct: 187 GNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNVY 246

Query: 184 TLK 186
            ++
Sbjct: 247 HIQ 249


>gi|29351589|gb|AAH49230.1| Psmb7 protein [Mus musculus]
          Length = 276

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 42  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 100

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 101 ISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 160

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 161 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 219

Query: 185 L 185
           +
Sbjct: 220 I 220


>gi|148694875|gb|EDL26822.1| proteasome (prosome, macropain) subunit, beta type 7, isoform CRA_b
           [Mus musculus]
          Length = 284

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 50  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 108

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 109 ISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 169 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 227

Query: 185 L 185
           +
Sbjct: 228 I 228


>gi|146165617|ref|XP_001015486.2| proteasome, putative [Tetrahymena thermophila]
 gi|146145426|gb|EAR95241.2| proteasome, putative [Tetrahymena thermophila SB210]
          Length = 297

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 12/189 (6%)

Query: 5   GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G +   ++    TT L  +  G V++A D + S G        RK+  +    ++   AG
Sbjct: 63  GPERSLMEFKKGTTTLAFKFQGGVIVAVDSRASQGSFDASETVRKIIEI-NDQLLGTMAG 121

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKT 116
            +AD     + L  +  +Y  Q        A    +   L +          M+   D  
Sbjct: 122 GAADCQFWEQYLAIECRKYQLQNREKVSVAAASRILINILYSYRNHGLSMGCMLTGWDHE 181

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +     D    +  + + GSG +YA            S   A E+ RKA+  A    
Sbjct: 182 GAQLYYLDNDGQRIKGNIFSCGSGSTYAYGVLDNEYHYNLSVKEAAELGRKAIYHATHRD 241

Query: 174 VYTNHNIVL 182
             +   + +
Sbjct: 242 AGSGGVVRI 250


>gi|302550295|ref|ZP_07302637.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Streptomyces viridochromogenes DSM 40736]
 gi|302467913|gb|EFL31006.1| proteasome endopeptidase complex, archaeal, beta subunit
           [Streptomyces viridochromogenes DSM 40736]
          Length = 281

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +            K  R+   +R+   M +     + L              
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDREKGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E G  A GSG  +A  A + L     S   A  +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEEQGYAATGSGSIFARGAMKKLFRNDLSEADATTLVVQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|66800081|ref|XP_628966.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
 gi|74896741|sp|Q54BC8|PSB5_DICDI RecName: Full=Proteasome subunit beta type-5; Flags: Precursor
 gi|60462347|gb|EAL60569.1| proteasome subunit beta type 5 [Dictyostelium discoideum AX4]
          Length = 272

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G ++++ D + + G  V   + +KV  +    ++   AG +AD      
Sbjct: 61  HGTTTLAFVYGGGIIVSVDSKSTQGPYVASRSVKKVIEITP-TLLGTMAGGAADCSFWER 119

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L ++   Y  +        A    +   + + +   L         DKT   +     D
Sbjct: 120 ELGRRCRLYELRNKELISVAAASKILANIVYSYKGYGLSMGTMITGWDKTGPQLYYVDND 179

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                    + GSG +YA                A E+ R+A+  A     Y+   I +
Sbjct: 180 GTRLHGQRFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAINV 238


>gi|239932274|ref|ZP_04689227.1| 20S proteasome beta-subunit [Streptomyces ghanaensis ATCC 14672]
          Length = 258

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 29  HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +            K  R+   +R+   M +     + L              
Sbjct: 88  LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDQGRIF 147

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E G  A GSG  +A  A + L     S  E   +  +A+  AAD    T 
Sbjct: 148 SYDVTGGRSEEQGYAATGSGSIFARGAMKKLFRDDLSEAEATTLVVQALYDAADDDSATG 207

Query: 178 H 178
            
Sbjct: 208 G 208


>gi|224110734|ref|XP_002315619.1| predicted protein [Populus trichocarpa]
 gi|222864659|gb|EEF01790.1| predicted protein [Populus trichocarpa]
          Length = 274

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 57  KGTTTLAFIFKEGVIVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 115

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 116 NLGIKCRLHELANKRRISVTGASKLLANILFSYRGMGLSVGTMIAGWDETGPGLYYVDSE 175

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
               +    ++GSG  YA     +      S   A E+ R+A+  A    
Sbjct: 176 GGRLKGTRFSVGSGSPYAYGILDSGYRFDMSIEEAAELGRRAIYHATFRD 225


>gi|320165793|gb|EFW42692.1| proteasome subunit beta 7 [Capsaspora owczarzaki ATCC 30864]
          Length = 273

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +    V + N +K+  +       G AG++AD     + 
Sbjct: 39  GTTICGVIFKHGVVLGADTRATNDTIVAQKNCQKIHYIAPNIYCCG-AGTAADTEQSTKM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R S  +     + + L   +  I  A      D     + +      
Sbjct: 98  IASQLELHRLTTGRKSRVVTACRLLKQMLFKYQGNIGAALVLGGVDINGPTLYSIHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++   A          A ++ R A  IAA I   + +  N+ + 
Sbjct: 158 TDKLPYVTMGSGSLAAMAVFEAGYRPDMEEADAVKLVRDA--IAAGIFNDLGSGSNVDVC 215

Query: 184 TLKVG 188
            L   
Sbjct: 216 ILTKD 220


>gi|297694719|ref|XP_002824618.1| PREDICTED: proteasome subunit beta type-11-like [Pongo abelii]
          Length = 300

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    + KV  + +  ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQH-LLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L+++L     +  +     +    +   +     + L         D++   +
Sbjct: 101 CATWYRVLQRELRLRELRDGQLPSVASAAKLLSAMMSRYRGLDLCVATALCGWDRSGPEL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            S   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTRLQGDIFSVGSGSPYAYGVLDHGYRYDMSTQEAYALARCAVAHATYRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|299116096|emb|CBN74512.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 286

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  +  G ++++ D + ++G  +     +KV  +    ++   AG +AD      
Sbjct: 67  KGTTTLAFKFQGGIIVSVDSRSTMGPYIASGTVKKVIEINPY-LLGTMAGGAADCSFWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   Y  +        A    +   +       L         DKT   +     D
Sbjct: 126 NLGIQCRMYELRNKERISVAAASKLLSNTMSQYRGYGLSMGTMVAGWDKTGPQLYYCDDD 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + ++GSG +YA            +   A E+ ++A+  A     Y+     + 
Sbjct: 186 GTRLHGNLFSVGSGSTYAYGVLDTHYKYDMTDEEAIELGKRAIYHATHRDAYSGSINNVY 245

Query: 184 TLK 186
            +K
Sbjct: 246 IVK 248


>gi|312139722|ref|YP_004007058.1| 20S proteasome beta subunit prcb [Rhodococcus equi 103S]
 gi|311889061|emb|CBH48374.1| putative 20S proteasome beta subunit PrcB [Rhodococcus equi 103S]
          Length = 284

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G VVIAGD + ++G  +   +  KV      +  AG AG++  A  L+ 
Sbjct: 54  HGTTIVALTFAGGVVIAGDRRATMGNLIASRDVEKVFVTDDYSA-AGIAGTAGVAIELVR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 113 LFAVELEHYEKIEGVQLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGFDLDAPDPERA 172

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A S+ + L      ++SA  +A +A+  AAD 
Sbjct: 173 GRIVSYDVVGGRYEERAGYHAVGSGSLFAKSSLKKLYREGADEDSALRMAIEALYDAADD 232

Query: 173 CVYTNH 178
              T  
Sbjct: 233 DSATGG 238


>gi|288917497|ref|ZP_06411862.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
 gi|288351043|gb|EFC85255.1| 20S proteasome A and B subunits [Frankia sp. EUN1f]
          Length = 273

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + + G  + + +  KV    + +   G+AG++     L+ 
Sbjct: 50  HGTTIVAVTFPGGVIMAGDRRATQGHMIAQRDVEKVHHADEFS-CVGYAGTAGVGAELIR 108

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y      +    AK  R+   ++    M +     I L      +       
Sbjct: 109 LFQVELEHYEKIEGSTLSLDAKANRLAFMVKGNLPMAMQGLAVIPLFAGFDTETGQGRIF 168

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
                     E    +IGSG  +A  + +       SA++  R   +A+  AAD    T 
Sbjct: 169 SYDVAAAKSEERTYESIGSGSVFARGSLKKRFRPDLSADDAVRISVEALYDAADDDSATG 228

Query: 178 H 178
            
Sbjct: 229 G 229


>gi|147225186|emb|CAN13318.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional protease 7) [Sus scrofa]
          Length = 208

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 3   HGTTTLAFKFQHGVIVAVDSRASAGSYIATLRVNKVIEINPY-LLGTMSGSAADCQYWER 61

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 62  LLAKECRLYYLRNGDRISVSAASKLLSNMMYQYRGMGLSMGSMICGWDKKGPGLYYVDEN 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                  + + GSG +YA     +      S EE   + R+A+  A     Y+   + +
Sbjct: 122 GTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRDSYSGGVVNM 180


>gi|302595913|sp|A1R6Q7|PSB_ARTAT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
          Length = 269

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 17/185 (9%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               HATTI+ +   G V++AGD + ++G  +   +  KV    + +++ G AG++  A 
Sbjct: 41  PSSPHATTIVALTYAGGVLMAGDRRATMGNIIASRHIEKVFPADEYSVL-GIAGTAGLAI 99

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM----- 124
            +    + +LE Y          + K  R+   +R    M +     I L          
Sbjct: 100 DITRLFQVELEHYEKIEGTLLSLVGKANRLGAMIRGNLPMAMQGMAVIPLFAGFDQVAGV 159

Query: 125 --------GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
                         E    ++GSG  +A  A + L     S E+   +A +A+  AAD  
Sbjct: 160 GRLFSYDVTGGRYEELEHHSVGSGSVFARGALKKLWKPNLSEEDAISVAVEALYDAADDD 219

Query: 174 VYTNH 178
             T  
Sbjct: 220 SATGG 224


>gi|239978575|ref|ZP_04701099.1| 20S proteasome beta-subunit [Streptomyces albus J1074]
          Length = 258

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 29  HGTTIVASTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEHSAV-GIAGTAGLAVEMVK 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +      +     K  R+   +R+   M +     + L +            
Sbjct: 88  LFQLELEHFEKVEGAALSLEGKANRLSTMIRSNLGMAMQGLAVVPLFVGYDVDRERGRIF 147

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E+G  A GSG ++A  + + L     + E+   +  +A+  AAD    T 
Sbjct: 148 SYDVTGGRSEEHGYAATGSGSTFARGSMKKLYRDDLTEEQATTLVVQALYDAADDDSATG 207

Query: 178 H 178
            
Sbjct: 208 G 208


>gi|6755206|ref|NP_035317.1| proteasome subunit beta type-7 precursor [Mus musculus]
 gi|17380252|sp|P70195|PSB7_MOUSE RecName: Full=Proteasome subunit beta type-7; AltName:
           Full=Macropain chain Z; AltName: Full=Multicatalytic
           endopeptidase complex chain Z; AltName: Full=Proteasome
           subunit Z; Flags: Precursor
 gi|1632755|dbj|BAA12017.1| proteasome Z subunit precursor [Mus musculus]
 gi|2062107|emb|CAA71824.1| proteasome subunti MC14 [Mus musculus]
 gi|2547068|dbj|BAA22857.1| proteasome subunit Z [Mus musculus]
 gi|12851549|dbj|BAB29085.1| unnamed protein product [Mus musculus]
 gi|26344576|dbj|BAC35937.1| unnamed protein product [Mus musculus]
 gi|26353242|dbj|BAC40251.1| unnamed protein product [Mus musculus]
 gi|26353852|dbj|BAC40556.1| unnamed protein product [Mus musculus]
 gi|35505253|gb|AAH57662.1| Proteasome (prosome, macropain) subunit, beta type 7 [Mus musculus]
 gi|74223013|dbj|BAE40650.1| unnamed protein product [Mus musculus]
 gi|123232474|emb|CAM21926.1| proteasome (prosome, macropain) subunit, beta [Mus musculus]
 gi|123233331|emb|CAM24063.1| proteasome (prosome, macropain) subunit, beta [Mus musculus]
          Length = 277

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|262202389|ref|YP_003273597.1| 20S proteasome A and subunit Bs [Gordonia bronchialis DSM 43247]
 gi|302595826|sp|D0LDT1|PSB_GORB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|262085736|gb|ACY21704.1| 20S proteasome A and B subunits [Gordonia bronchialis DSM 43247]
          Length = 292

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 22/193 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + ++G  +   + +KV    + +  AG AG++  A  ++ 
Sbjct: 61  HGTTIVAVSYPGGVILAGDRRATMGNLIATRDVKKVYITDEYSA-AGIAGTAGIAIEMVR 119

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      L     + L++            
Sbjct: 120 LFAVELEHYEKLEGVPLTLDGKVSRLASMVRGNLGAALQGLAAVPLLVGYDIDHDDPTER 179

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
                    GD  E   G  AIGSG  +A S+ + L        SA  IA +A+  AAD 
Sbjct: 180 GRIFSFDVAGDRHEEFGGYQAIGSGSVFAKSSLKKLYRHDLDEASALAIAVEALYDAADD 239

Query: 173 CVYTNHNIVLETL 185
              T    ++  +
Sbjct: 240 DSATGGPDIVRKI 252


>gi|325676828|ref|ZP_08156501.1| proteasome, beta subunit [Rhodococcus equi ATCC 33707]
 gi|325552376|gb|EGD22065.1| proteasome, beta subunit [Rhodococcus equi ATCC 33707]
          Length = 284

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 72/186 (38%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G VVIAGD + ++G  +   +  KV      +  AG AG++  A  L+ 
Sbjct: 54  HGTTIVALTFAGGVVIAGDRRATMGNLIASRDVEKVFVTDDYSA-AGIAGTAGVAIELVR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 113 LFAVELEHYEKIEGVQLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGFDLDAPDPERA 172

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A S+ + L      ++SA  +A +A+  AAD 
Sbjct: 173 GRIVSYDVVGGRYEERAGYHAVGSGSLFAKSSLKKLYREGADEDSALRMAIEALYDAADD 232

Query: 173 CVYTNH 178
              T  
Sbjct: 233 DSATGG 238


>gi|12833090|dbj|BAB22385.1| unnamed protein product [Mus musculus]
          Length = 277

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|254172949|ref|ZP_04879623.1| proteasome subunit beta [Thermococcus sp. AM4]
 gi|214033105|gb|EEB73933.1| proteasome subunit beta [Thermococcus sp. AM4]
          Length = 200

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++    VV+A D Q SLG  V   N RK+  +     I   AGS  D   L   
Sbjct: 7   GTTTVGIKVKDGVVLAADTQASLGNMVETLNIRKILPITDRIAITT-AGSVGDVQALARM 65

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           LE +   Y     R     A    +   L   +        ++        + +      
Sbjct: 66  LEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQILIGGYVDKPELASVDALGG 125

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH-NIVLET 184
                  A GSG  +A++          S   A+E+A +A+  A    VYT    + +  
Sbjct: 126 LVFEKYTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVRTAGKRDVYTGERKVQVVV 185

Query: 185 LKVG 188
           +   
Sbjct: 186 ITKD 189


>gi|290961684|ref|YP_003492866.1| 20S proteasome subunit beta precursor [Streptomyces scabiei 87.22]
 gi|302595789|sp|C9Z4D0|PSB_STRSW RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|260651210|emb|CBG74332.1| 20S proteasome beta-subunit precursor [Streptomyces scabiei 87.22]
          Length = 281

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 19/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------- 120
             + +LE +            K  R+   +R+   M +     + L              
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRNRGRIF 170

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
                G   E      A GSG  +A  A + L     S   A  +  +A+  AAD    T
Sbjct: 171 SYDVTGGRSEESG-YAATGSGSIFARGAMKKLFRADLSEADATTLVVQALYDAADDDSAT 229

Query: 177 NH 178
             
Sbjct: 230 GG 231


>gi|320011740|gb|ADW06590.1| 20S proteasome A and B subunits [Streptomyces flavogriseus ATCC
           33331]
          Length = 281

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +      +     K  R+   +R+  AM +     + L              
Sbjct: 111 LFQLELEHFEKVEGATLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGFDVDREKGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E+G  A GSG  +A  + + L     + E+   +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEEHGYAATGSGSVFARGSMKKLYRADLTEEQTLTLVVQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|256084599|ref|XP_002578515.1| proteasome catalytic subunit 2 (T01 family) [Schistosoma mansoni]
 gi|238663891|emb|CAZ34753.1| proteasome catalytic subunit 2 (T01 family) [Schistosoma mansoni]
          Length = 281

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G  V + N  K+ R+ +     G AG++AD   +   
Sbjct: 38  GTTICGVVFKNGVVLGADTRATEGTVVAEKNCSKIHRISENIYCCG-AGTAADTQMVTLM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  ++E +     R+   +A    + +YL   +        +   D T   + +      
Sbjct: 97  ISSQVELHSLNTGRTPRVIAPLRLLKRYLYQYQGYVGAALVLGGVDSTGPHLYSIAPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG    +S   +          A ++ R    IAA I   + +  N+ + 
Sbjct: 157 TDKLPYITMGSGSLACMSVLESRFKFDMEQDEAVKLVRDG--IAAGIFNDMGSGSNVDIC 214

Query: 184 TLKVG 188
            +   
Sbjct: 215 IITKD 219


>gi|56754849|gb|AAW25607.1| SJCHGC06118 protein [Schistosoma japonicum]
 gi|226471392|emb|CAX70777.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
           japonicum]
 gi|226489366|emb|CAX75827.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
           japonicum]
 gi|226489368|emb|CAX75828.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
           japonicum]
 gi|226489370|emb|CAX75829.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
           japonicum]
 gi|226489372|emb|CAX75830.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
           japonicum]
          Length = 281

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 68/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V + N  K+ R+       G AG++AD   +   
Sbjct: 38  GTTICGVVFKNGIVLGADTRATEGNIVAEKNCSKIHRIADNIYCCG-AGTAADTQMVTLM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  ++E +     R+   +A    + +YL   +        +   D T   + +      
Sbjct: 97  ISSQVELHRLNTGRTPRVIAPLRLLKRYLYQYQGYVGAALVLGGVDSTGPHLFSIAPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG    +S   +          A ++ R    IAA I   + +  N+ + 
Sbjct: 157 TDKLPYITMGSGSLACMSVLESRFKFNMEQDEAVKLVRDG--IAAGIFNDMGSGSNVDIC 214

Query: 184 TLKVG 188
            +   
Sbjct: 215 IITKD 219


>gi|289740977|gb|ADD19236.1| 20S proteasome regulatory subunit beta type PSMB5/PSMB8/PRE2
           [Glossina morsitans morsitans]
          Length = 279

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + GQ +     +K+  + +  ++   AG +AD      
Sbjct: 71  HGTTTLGFKYQGGVILAVDSRATGGQFIGSQTMKKIVEINQY-MLGTLAGGAADCVYWDR 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +        A    M       + M L         DK    +     D
Sbjct: 130 VLAKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSD 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                  V ++GSG  YA     +          A+E+ R+A+  A     Y+   + +
Sbjct: 190 ASRSPGNVFSVGSGSVYAFGVLDSGYRWDLKDDEAQELGRRAIYNATFRDAYSGGIVRV 248


>gi|219567040|dbj|BAH05038.1| proteasome subunit, beta type 8 [Oryzias curvinotus]
          Length = 238

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+ +    V++A D + S G  V      KV  +    ++   +GS+AD      
Sbjct: 33  HGTTTLSFKFKHGVIVAVDSRASTGSYVDTCEYNKVIEINPY-LLGTMSGSAADCKYWER 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 92  LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDDN 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+ +  A     Y+   + + 
Sbjct: 152 GNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMY 211

Query: 184 TLKVG 188
            ++  
Sbjct: 212 HIQED 216


>gi|221480786|gb|EEE19215.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
          Length = 368

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 10/188 (5%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
             +   TTI  V     VV+  D + + G  V   N  K+ R+      AG AG+SAD  
Sbjct: 129 PARKTGTTICGVVCKDGVVLGADTRATEGTIVADKNCSKLHRIADNMYAAG-AGTSADLD 187

Query: 70  TLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
            + + L  ++E +            +   L+++    +  +    ++   D     +   
Sbjct: 188 HMCDWLAVQVELHRLNTNAKPRVSMAVSVLSQELFKYQGYKGCAVVLGGVDFKGPQIYKI 247

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
                   +   A+GSG   A++   A      + EE   + R A+       + +  NI
Sbjct: 248 HPHGSTDCSNFAAMGSGSLNAMAVLEAGYKDGMTLEEGKNLVRDAIKAGVLNDLGSGGNI 307

Query: 181 VLETLKVG 188
            L  +   
Sbjct: 308 DLCIITRE 315


>gi|237845137|ref|XP_002371866.1| proteasome subunit beta type 7, putative [Toxoplasma gondii ME49]
 gi|211969530|gb|EEB04726.1| proteasome subunit beta type 7, putative [Toxoplasma gondii ME49]
 gi|221501451|gb|EEE27227.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
          Length = 368

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 10/188 (5%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
             +   TTI  V     VV+  D + + G  V   N  K+ R+      AG AG+SAD  
Sbjct: 129 PARKTGTTICGVVCKDGVVLGADTRATEGTIVADKNCSKLHRIADNMYAAG-AGTSADLD 187

Query: 70  TLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
            + + L  ++E +            +   L+++    +  +    ++   D     +   
Sbjct: 188 HMCDWLAVQVELHRLNTNAKPRVSMAVSVLSQELFKYQGYKGCAVVLGGVDFKGPQIYKI 247

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
                   +   A+GSG   A++   A      + EE   + R A+       + +  NI
Sbjct: 248 HPHGSTDCSNFAAMGSGSLNAMAVLEAGYKDGMTLEEGKNLVRDAIKAGVLNDLGSGGNI 307

Query: 181 VLETLKVG 188
            L  +   
Sbjct: 308 DLCIITRE 315


>gi|182439652|ref|YP_001827371.1| putative 20S proteasome beta-subunit [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326780317|ref|ZP_08239582.1| proteasome, beta subunit [Streptomyces cf. griseus XylebKG-1]
 gi|302595787|sp|B1W306|PSB_STRGG RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|178468168|dbj|BAG22688.1| putative 20S proteasome beta-subunit [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660650|gb|EGE45496.1| proteasome, beta subunit [Streptomyces cf. griseus XylebKG-1]
          Length = 281

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI++    G VV+AGD + ++G  +   + +KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVSASFPGGVVLAGDRRATMGNMIASRDMQKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +            K  R+   +R+  AM +     + L              
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDVDREKGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E+G  A GSG  +A +A + L     + E+   +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRTEESGYAATGSGSIFARNAMKKLYREDLTEEQALTLVVQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|269126545|ref|YP_003299915.1| 20S proteasome subunits A and B [Thermomonospora curvata DSM 43183]
 gi|302595699|sp|D1A2S9|PSB1_THECD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PrcB 1; Flags: Precursor
 gi|268311503|gb|ACY97877.1| 20S proteasome A and B subunits [Thermomonospora curvata DSM 43183]
          Length = 284

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ V   G VV+AGD + + G  + + +  KV R  + + +A  AG++     ++ 
Sbjct: 55  HATTIVAVTFPGGVVMAGDRRATAGNMIAQRDVEKVFRADEFSAVA-IAGTAGIGMEIVR 113

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + ++E Y     R+     K  R+   +R    M +     + L              
Sbjct: 114 LFQVEIEHYEKMEGRTLSLEGKANRLATMIRANLGMAMQGLVAVPLFAGYDTEREVGRIF 173

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTN 177
                     E+   +IGSG  +A  A + L     SA++ A    +A+  AAD    T 
Sbjct: 174 SYDPAGGRYEEHEHHSIGSGSVFARGALKKLWRPDLSAQDAALVCVQALYDAADDDSATG 233

Query: 178 H 178
            
Sbjct: 234 G 234


>gi|118789882|ref|XP_317882.3| AGAP011423-PA [Anopheles gambiae str. PEST]
 gi|116122785|gb|EAA13087.3| AGAP011423-PA [Anopheles gambiae str. PEST]
          Length = 279

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 16/199 (8%)

Query: 3   VMGDKHYAVKM--HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           ++ +     KM    TTI  +     V++  D + + G  V   N  K+  L K     G
Sbjct: 25  LVKNGFVPPKMIKTGTTICGIIYKDGVILGADTRATEGPIVADKNCEKIHYLAKNMYCCG 84

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIAD 114
            AG++AD     + +   LE +     R+   +  +  + ++L   +        +   D
Sbjct: 85  -AGTAADTEMTTQMIASNLELHRLNTGRTVPVVVANTMLKQFLFRYQGYVSAALVLGGVD 143

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
            T + +          +     +GSG   A+S   +      S EE   + R A  IAA 
Sbjct: 144 TTGSYIYCIYPHGSTDKLPYATMGSGSLAAMSVFESRWKPDMSEEEGKKLVRDA--IAAG 201

Query: 172 I--CVYTNHNIVLETLKVG 188
           +   + +  NI L  ++  
Sbjct: 202 VFNDLGSGSNIDLCVIRKD 220


>gi|187109138|ref|NP_001119673.1| 20S proteasome beta5 subunit [Acyrthosiphon pisum]
 gi|89473784|gb|ABD72704.1| putative 20S proteasome beta5 subunit [Acyrthosiphon pisum]
 gi|239788834|dbj|BAH71078.1| ACYPI000065 [Acyrthosiphon pisum]
 gi|239788836|dbj|BAH71079.1| ACYPI000065 [Acyrthosiphon pisum]
 gi|239788838|dbj|BAH71080.1| ACYPI000065 [Acyrthosiphon pisum]
 gi|239788840|dbj|BAH71081.1| ACYPI000065 [Acyrthosiphon pisum]
 gi|239788844|dbj|BAH71083.1| ACYPI000065 [Acyrthosiphon pisum]
 gi|239788851|dbj|BAH71084.1| ACYPI000065 [Acyrthosiphon pisum]
 gi|239788853|dbj|BAH71085.1| ACYPI000065 [Acyrthosiphon pisum]
 gi|239788861|dbj|BAH71089.1| ACYPI000065 [Acyrthosiphon pisum]
          Length = 276

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 64/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G +V+A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 71  HGTTTLGFLYQGGIVLAVDSRATGGQYIGSQCMKKIVEINDF-MLGTLAGGAADCVYWDR 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L K+   +  +        A    M   +   +        M+   DK    +     D
Sbjct: 130 VLSKQCRLHELRNKERISVTAASKIMSNMIYYYKGYGLSIGMMLAGYDKNGPSLFYIDND 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
                  V ++GSG  YA     +      + EE   + ++A+  A     Y+   + + 
Sbjct: 190 GSRTPGKVFSVGSGSIYAFGVLDSGYKWDLTDEEAQKLGQRAIFHATHRDAYSGGIVRVY 249

Query: 184 TLKVG 188
            +   
Sbjct: 250 HITKD 254


>gi|297195371|ref|ZP_06912769.1| 20S proteasome beta-subunit [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719259|gb|EDY63167.1| 20S proteasome beta-subunit [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 281

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVATTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +            K  R+   +R+   M +     + L              
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDIDREKGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E+G  A GSG  +A  A + L     +   A  +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEEHGFAATGSGSIFARGAMKKLYREDLTEQQATTLVIQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|270011211|gb|EFA07659.1| hypothetical protein TcasGA2_TC030625 [Tribolium castaneum]
          Length = 273

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 8/176 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G VV+A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 65  HGTTTLGFMYKGGVVLAVDSRATGGQFIGSQTMKKIVEINDF-LLGTLAGGAADCVYWDR 123

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL----VITGMGDVLE 129
            L K+   Y  +        A    M   + N + M L     +      +     +   
Sbjct: 124 VLAKQCRMYELRNRERISVAAASKLMANMVYNYKGMGLSMGMMLAGWDKRLYYVDSEGTR 183

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
               V ++GSG  YA     +      + EE   + R+++  A     Y+   + +
Sbjct: 184 TPGKVFSVGSGSIYAFGVLDSGYKWDLTDEEAYDLGRRSIYHATHRDAYSGGIVRV 239


>gi|16758298|ref|NP_445984.1| proteasome subunit beta type-7 precursor [Rattus norvegicus]
 gi|17380238|sp|Q9JHW0|PSB7_RAT RecName: Full=Proteasome subunit beta type-7; AltName:
           Full=Macropain chain Z; AltName: Full=Multicatalytic
           endopeptidase complex chain Z; AltName: Full=Proteasome
           subunit Z; Flags: Precursor
 gi|9719458|gb|AAF97811.1|AF285103_1 proteasome z subunit [Rattus norvegicus]
 gi|38051889|gb|AAH60551.1| Proteasome (prosome, macropain) subunit, beta type 7 [Rattus
           norvegicus]
          Length = 277

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|225193029|dbj|BAH29649.1| proteasome subunit, beta type 8 [Oryzias latipes]
 gi|225193056|dbj|BAH29667.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 250

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+ +    V++A D + S G  +      KV  +    ++   +GS+AD      
Sbjct: 68  HGTTTLSFKFKHGVIVAVDSRASTGSYIDTCEYNKVIEINPY-LLGTMSGSAADCKYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 127 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKDGPGIYYVDDN 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+ +  A     Y+   + + 
Sbjct: 187 GNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMY 246

Query: 184 TLK 186
            ++
Sbjct: 247 HIQ 249


>gi|301618803|ref|XP_002938794.1| PREDICTED: proteasome subunit beta type-7-like [Xenopus (Silurana)
           tropicalis]
          Length = 277

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 69/195 (35%), Gaps = 14/195 (7%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G K  A +   TTI  +     V++  D + + G  V   N  K+  +       G AG+
Sbjct: 33  GHKLPAARKTGTTIAGIVFKDGVILGADTRATEGMIVADKNCSKIHYIAPNVYCCG-AGT 91

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTIT 118
           +AD     + +   +E +     R S     +  + + L   +  I  A      D T  
Sbjct: 92  AADTEMTTQMISSNMELHSLSTGRLSRVATANRMLKQMLFRYQGYIGAALVLGGVDCTGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--C 173
            + +        +   + +GSG   A++            EE   + R A  IAA I   
Sbjct: 152 HLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKPDMEEEEAKQLVRDA--IAAGIFND 209

Query: 174 VYTNHNIVLETLKVG 188
           + +  NI L  +   
Sbjct: 210 LGSGSNIDLCVITKN 224


>gi|242094726|ref|XP_002437853.1| hypothetical protein SORBIDRAFT_10g003770 [Sorghum bicolor]
 gi|241916076|gb|EER89220.1| hypothetical protein SORBIDRAFT_10g003770 [Sorghum bicolor]
          Length = 280

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    D  V++A D + S+G  +     RK+  +    ++   AG +AD      
Sbjct: 60  KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 118

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+    +     +
Sbjct: 119 NLGNKCRLHELSNKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSE 178

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                    ++GSG  YA            S   A E+AR+A+  A      +   + +
Sbjct: 179 GARLVGNKFSVGSGSLYAYGVLDDGYRFNMSVEEAAELARRAIYGATFRDAASGGCVSV 237


>gi|12849471|dbj|BAB28354.1| unnamed protein product [Mus musculus]
          Length = 277

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLEFHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|11513423|pdb|1G65|K Chain K, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513437|pdb|1G65|Y Chain Y, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
          Length = 211

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 61/177 (34%), Gaps = 12/177 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T L  R  G +++A D + + G  V     +KV  +    ++   AG +AD       L 
Sbjct: 1   TTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPF-LLGTMAGGAADCQFWETWLG 59

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGDVL 128
            +   +  +        A    +   +   +   L           K    +     D  
Sbjct: 60  SQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYYVDSDGT 119

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
             +  +  +GSG ++A     +      S E+   + ++++  AA    Y+  ++ L
Sbjct: 120 RLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGSVNL 176


>gi|297684734|ref|XP_002819976.1| PREDICTED: proteasome subunit beta type-5-like [Pongo abelii]
          Length = 270

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 18/187 (9%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT-------------- 118
             L ++   Y  +        A    +   +   + M L     I               
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPVGWATWQ 175

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +     +         ++GSG  YA        S         ++A +A+  A     Y
Sbjct: 176 GLYYVDSEGNRISGATFSVGSGSVYAYGVMDWGYSYDLEVDQPYDLAPRAIYQATYRDAY 235

Query: 176 TNHNIVL 182
           +   + L
Sbjct: 236 SGGAVNL 242


>gi|163840778|ref|YP_001625183.1| 20S proteasome beta-subunit [Renibacterium salmoninarum ATCC 33209]
 gi|302595779|sp|A9WSI1|PSB_RENSM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|162954254|gb|ABY23769.1| 20S proteasome beta-subunit [Renibacterium salmoninarum ATCC 33209]
          Length = 279

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 17/192 (8%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               HATTI+ +   G V++AGD + ++G  +   +  KV      +++ G AG++  A 
Sbjct: 51  PQTPHATTIVAMTFAGGVLMAGDRRATMGTMIASRHIEKVFPADGYSVL-GIAGTAGLAI 109

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL- 128
            + +  + +LE Y            K  R+   +R    M L     + L       +  
Sbjct: 110 DITKLFQVELEHYEKIEGTPLSLEGKANRLGAMVRGNLPMALQGLAVVPLFAGFDPALSQ 169

Query: 129 ------------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
                         E    ++GSG  +A  A + L     S   A ++A +++  AAD  
Sbjct: 170 GRLFSYDVTGGRYEELEHHSVGSGSVFARGAMKKLWKPGLSESDAVQVAVESLFDAADDD 229

Query: 174 VYTNHNIVLETL 185
             T    V+  L
Sbjct: 230 SATGGPDVIRKL 241


>gi|219567038|dbj|BAH05037.1| proteasome subunit, beta type 8 [Oryzias javanicus]
          Length = 232

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +A KV  +    ++   +GS+AD      
Sbjct: 27  HGTTTLAFKFRHGVIVAVDSRASAGNYLDCNDANKVIEINPY-LLGTMSGSAADCQYWER 85

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +   + M L         DK    +     +
Sbjct: 86  LLAKECRLYKLRNNHRISVAAASKLLSNMMLGYKGMGLSMGSMICGWDKEGPGLFYVDSN 145

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + G G SYA     +      +   A E+  + ++ A     Y+  ++ +
Sbjct: 146 GTRLSGRMFSTGCGNSYAYGVVDSGYKEDMTVEEAYELGCRGIAHATHRDAYSGGSVNM 204


>gi|195347018|ref|XP_002040051.1| GM15565 [Drosophila sechellia]
 gi|194135400|gb|EDW56916.1| GM15565 [Drosophila sechellia]
          Length = 315

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++  D + + GQ +     RK+  L    ++   AG +AD      
Sbjct: 70  HGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDY-MLGTLAGGAADCVYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +  +          +       + M L+        D     +I    +
Sbjct: 129 VLAKECRLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDEGPKLIYVDSE 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            +     V ++GSG  YAL           S   A ++AR+A+  A     Y+   + L 
Sbjct: 189 GMISHGQVFSVGSGSPYALGVLDTGYRYDLSDQEAYDLARRAIYHATSKDAYSGGIVRLY 248

Query: 184 TLKVG 188
            +   
Sbjct: 249 HIHSE 253


>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex, beta component [Methanothermus
           fervidus DSM 2088]
 gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
           fervidus DSM 2088]
          Length = 211

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 14/196 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +++       TT + +     +V A + + +LG  +      K+ ++ +       AG
Sbjct: 1   MSNRNN---FKGTTTVGIVCKDGIVFASEKRATLGNLIAHKAVDKIFKIDEHLA-TTVAG 56

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
           S  DA  L+E L+ ++  Y  +  + +   A        L        I        D+T
Sbjct: 57  SVGDAQKLVEYLKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGIDET 116

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              + +      + E+  ++ GSG   A            S E+   IA +A+  +    
Sbjct: 117 GPKIYSVDPAGGKIEDKYVSTGSGSPIAYGVLEDRYKKDMSVEDAINIALRAIKSSTKRD 176

Query: 174 VYTNHNIVLETLKVGD 189
            ++   I L  +   +
Sbjct: 177 TFSGDGISLAVVTEKE 192


>gi|124487727|gb|ABN11951.1| putative proteasome 2 subunit [Maconellicoccus hirsutus]
          Length = 236

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+  D + +    V   +  K+  L K     G AG++AD   +   
Sbjct: 38  GTTIVGVVYKDGVVLGADTRATEDTIVADKDCAKIHYLNKNMYCCG-AGTAADTVQVTSM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R+   +     + + L   +  I  A      DKT + + +      
Sbjct: 97  ISSNLELHRLNSGRTVPVVVACTMLKQMLFRYQGHIGAALIIGGVDKTGSHLYSIHPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A++   +      +   A+E+ ++   IAA I   + +  N+ L 
Sbjct: 157 SDKLPYTTMGSGSLAAMAVFESKWKPDLTEEEAKELVKEG--IAAGIFNDLGSGSNVDLC 214

Query: 184 TLKVG 188
            ++  
Sbjct: 215 VIRKD 219


>gi|194756128|ref|XP_001960331.1| GF13303 [Drosophila ananassae]
 gi|190621629|gb|EDV37153.1| GF13303 [Drosophila ananassae]
          Length = 314

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++  D + + GQ +     +K+  L    ++   AG +AD      
Sbjct: 70  HGTTTLGFKFQGGVILCADSRATSGQYIGSQTMKKIVELNDY-MLGTLAGGAADCVYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   +  +  +          +       + M L+        D     +I    +
Sbjct: 129 VLAKECRLHQLRYRKRMTVDTAARIICNISNEYKGMGLVMGMMLAGYDDEGPKLIYVDSE 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            ++    V ++GSG  YAL           +   A ++A++A+  A     Y+   + L 
Sbjct: 189 GMKSSGLVFSVGSGSPYALGVLDTGYRYDLTDQEAYDLAKRAIYHATSKDAYSGGIVRLY 248

Query: 184 TLKVG 188
            +   
Sbjct: 249 HINAE 253


>gi|308321337|gb|ADO27820.1| proteasome subunit beta type-7 [Ictalurus furcatus]
          Length = 295

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     V++  D + +    V   N  K+  +       G AG++AD     + 
Sbjct: 61  GTTICGVVYKDGVILGADTRATEEMVVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQL 119

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R       +  + + L   +  I  A      D     + +      
Sbjct: 120 ISSNLELHSLSTNRLPRVATANRMLKQMLFRYQGYIGAALVLGGVDCNGPHLYSIYPHGS 179

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   + R A  IAA I   + +  NI L 
Sbjct: 180 TDKLPYVTMGSGSLAAMAVFEDRYRPDLEEEEAKLLVRDA--IAAGIFNDLGSGSNIDLC 237

Query: 184 TLKVG 188
            +  G
Sbjct: 238 VISKG 242


>gi|291443528|ref|ZP_06582918.1| 20S proteasome beta-subunit [Streptomyces roseosporus NRRL 15998]
 gi|291346475|gb|EFE73379.1| 20S proteasome beta-subunit [Streptomyces roseosporus NRRL 15998]
          Length = 281

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 19/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------------DKTITL 119
             + +LE +            K  R+   +R+  AM +                DK    
Sbjct: 111 LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDIDRDKGRIF 170

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
                G   E      A GSG  +A  + + L     +   A  +  +A+  AAD    T
Sbjct: 171 SYDVTGGRSEETG-YAATGSGSIFARGSMKKLYREDLTQEQALTLVVQALYDAADDDSAT 229

Query: 177 NH 178
             
Sbjct: 230 GG 231


>gi|170043975|ref|XP_001849640.1| proteasome subunit beta type 7 [Culex quinquefasciatus]
 gi|167867238|gb|EDS30621.1| proteasome subunit beta type 7 [Culex quinquefasciatus]
          Length = 282

 Score =  124 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  L K     G AG++AD       
Sbjct: 41  GTTIVGIIYKDGVILGADTRATEGPIVADKNCEKIHYLAKNMYCCG-AGTAADTEMTTNM 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R+   +  +  + ++L   +  I  A      D T + +        
Sbjct: 100 IASNLELHRLNTGRTVPVVVANTMLKQFLFRYQGHISAALVLGGVDNTGSYIYCIYPHGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A+S   +        EE   + R A  IAA +   + +  NI L 
Sbjct: 160 TDKLPYATMGSGSLAAMSVFESRWKPDMDEEEGKKLVRDA--IAAGVFNDLGSGSNIDLC 217

Query: 184 TLKVG 188
            ++  
Sbjct: 218 VIRKD 222


>gi|281208762|gb|EFA82937.1| proteasome subunit beta type 5 [Polysphondylium pallidum PN500]
          Length = 277

 Score =  124 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 12/185 (6%)

Query: 9   YAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             ++M H TT L  +  G V++A D + + G  V     +KV  +    ++   AG +AD
Sbjct: 55  KPIEMAHGTTTLAFQYAGGVIVAVDSKSTQGSYVASRTVKKVIEITPY-LLGTMAGGAAD 113

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
                  L ++   +  +        A    +   +   +   L         DKT   +
Sbjct: 114 CSYWERELGRQCRLFELRNKEMISVAAASKILANIVYGYKGYGLSMGTMVTGWDKTGPCL 173

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                +    +    A+GSG +YA     +      +   A E+ R+++  A      + 
Sbjct: 174 YYVDSEGTRLKGLRFAVGSGSTYAYGVLDSGFDWNMTDEQACELGRRSVYHATHRDAMSG 233

Query: 178 HNIVL 182
             I +
Sbjct: 234 GFINV 238


>gi|147906595|ref|NP_001087535.1| proteasome subunit beta type-7 [Xenopus laevis]
 gi|51261485|gb|AAH80076.1| MGC84123 protein [Xenopus laevis]
          Length = 277

 Score =  124 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 14/195 (7%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G K  + +   TTI  +     V++  D + + G  V   N  K+  +       G AG+
Sbjct: 33  GHKLPSSRKTGTTIAGIVFKDGVILGADTRATEGMIVADKNCSKIHYIAPNVYCCG-AGT 91

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTIT 118
           +AD     + +   +E +     R       +  + + L   +  I  A      D +  
Sbjct: 92  AADTEMTTQMISSNMELHSLSTGRLPRVATANRMLKQMLFRYQGYIGAALVLGGVDCSGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--C 173
            + +        +   + +GSG   A++            EE   + R A  IAA I   
Sbjct: 152 HLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYKPDMEEEEAKQLVRNA--IAAGIFND 209

Query: 174 VYTNHNIVLETLKVG 188
           + +  NI L  +   
Sbjct: 210 LGSGSNIDLCVITKN 224


>gi|332229979|ref|XP_003264163.1| PREDICTED: proteasome subunit beta type-7-like [Nomascus
           leucogenys]
          Length = 277

 Score =  124 bits (311), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 67/184 (36%), Gaps = 12/184 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 LKVG 188
           +   
Sbjct: 221 ISKN 224


>gi|297818166|ref|XP_002876966.1| hypothetical protein ARALYDRAFT_484397 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322804|gb|EFH53225.1| hypothetical protein ARALYDRAFT_484397 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 274

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 12/176 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             TT L       V++A D + S+G  + M  + +K+  +    ++   AG +AD     
Sbjct: 56  KGTTTLAFIFKEGVMVAADSRASMGGYICMSQSVKKIIEINPY-MLGTMAGGAADCQFWH 114

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             L  K   +     R          +   L +   M L         D+T   +     
Sbjct: 115 RNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDN 174

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
           +    +    ++GSG  YA     +      S   A E+AR+++  A      +  
Sbjct: 175 EGGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGG 230


>gi|269795388|ref|YP_003314843.1| proteasome endopeptidase complex, beta component [Sanguibacter
           keddieii DSM 10542]
 gi|302595785|sp|D1BHT9|PSB_SANKS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|269097573|gb|ACZ22009.1| proteasome endopeptidase complex, beta component [Sanguibacter
           keddieii DSM 10542]
          Length = 285

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 65/185 (35%), Gaps = 17/185 (9%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               H TTI+    DG VV+AGD + + G  +      KV    + + + G AG++  A 
Sbjct: 45  PPAPHGTTIVAATFDGGVVVAGDRRATSGSMIAHREIEKVFAADEFSAV-GIAGTAGLAL 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG---- 125
            L+   + +LE Y            K  R+   +R    + +     + L          
Sbjct: 104 ELVRLFQLELEHYEKIEGTLLSLDGKANRLSTMIRGNLGLAMQGLAVVPLFAGFDLVERR 163

Query: 126 ---------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
                         E    ++GSG  +A  A + L      AE   R   +A+  AAD  
Sbjct: 164 GRIFSYDVTGGRYEELDHHSVGSGSVFARGALKKLWRPGLDAEAAVRVVVEALFDAADDD 223

Query: 174 VYTNH 178
             T  
Sbjct: 224 SATGG 228


>gi|211939903|gb|ACJ13432.1| proteasome subunit beta 7 [Helicoverpa armigera]
          Length = 281

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 14/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + +    V   N +K+  L       G AG++AD     + 
Sbjct: 39  GTTIVGIIFADGVILGADTRATENTVVSDKNCQKIHYLAGNMYCCG-AGTAADTEMTTQT 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE       R+         + + L   +  I  A      D+T   +        
Sbjct: 98  VASQLELQRLHTGRTVPVETAATLLKRMLFRYQGYIGAALVLGGVDRTGPHIYCIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A++   A      + EE   + R A  IAA I   + +  N+ L 
Sbjct: 158 VDKLPYATMGSGSLAAMAVFEAGWKPNMNEEEGKKLVRDA--IAAGIFNDLGSGSNVDLC 215

Query: 184 TL 185
            +
Sbjct: 216 VI 217


>gi|21465653|pdb|1IRU|L Chain L, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465667|pdb|1IRU|Z Chain Z, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
          Length = 204

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 60/177 (33%), Gaps = 11/177 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD       L
Sbjct: 1   TTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWERLL 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVL 128
            ++   Y  +        A    +   +   + M L         DK    +     +  
Sbjct: 60  ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 119

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  ++GSG  YA        S       A ++AR+A+  A     Y+   + L
Sbjct: 120 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNL 176


>gi|297685324|ref|XP_002820242.1| PREDICTED: proteasome subunit beta type-7-like [Pongo abelii]
          Length = 277

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 67/184 (36%), Gaps = 12/184 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 LKVG 188
           +   
Sbjct: 221 ISKN 224


>gi|303244278|ref|ZP_07330615.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
           okinawensis IH1]
 gi|302485405|gb|EFL48332.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
           okinawensis IH1]
          Length = 220

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 13/198 (6%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           ++ + HY   M  TT + +     VV+A D + ++G  +    A+K+ ++    I    A
Sbjct: 1   MINNDHYKEYMKGTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKIDDY-IAMTIA 59

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL--------IAD 114
           GS  DA +L+  +  + + Y  +   +    +    +   L                  +
Sbjct: 60  GSVGDAQSLVRMISAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQLIIGGYDN 119

Query: 115 KTITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAA 170
                + +      L  E    + GSG   AL    A      +    +E+A KA+  A 
Sbjct: 120 LHGPKLFSLDPVGGLNEETSFTSTGSGSPTALGVLEAEYKKDMTINKGKELAVKALISAM 179

Query: 171 DICVYTNHNIVLETLKVG 188
           +   Y+ + I L  +   
Sbjct: 180 ERDAYSGNGISLAVIDEN 197


>gi|225710552|gb|ACO11122.1| Proteasome subunit beta type-5 precursor [Caligus rogercresseyi]
          Length = 278

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  + +G  ++A D + + G  V   + RK+  +    ++A  AG +AD      
Sbjct: 69  HGTTTLGFKYEGGTILAVDSRATSGGYVGSGSVRKIIEVSDY-LLATMAGGAADCTYWDR 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   Y  +        A    +       + M L         DK    +     +
Sbjct: 128 VLAMECRLYELRNHCRISVAAASKLLANNAYRYKGMGLSMGAMIAGYDKRGPELYYVDSE 187

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + ++GSG  YA     A      +   A E+ R+A++ A      +   I + 
Sbjct: 188 GSRTPGNLFSVGSGSVYAYGVLDADYRYDLTDEEAYELGRRAIAHATYRDAASGGIIRVM 247

Query: 184 TLKVG 188
            +   
Sbjct: 248 HVTKE 252


>gi|114053073|ref|NP_001040536.1| proteasome subunit beta 7 [Bombyx mori]
 gi|95102982|gb|ABF51432.1| proteasome subunit beta 7 [Bombyx mori]
          Length = 283

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 14/183 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + +    V   N +K+  L       G AG++AD     + 
Sbjct: 39  GTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCG-AGTAADTEMTTQS 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE       R+         + + L   +  I  A      D+T   +        
Sbjct: 98  VASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVDRTGPHIYCIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A++   A      + EE   + R A  IAA I   + +  N+ L 
Sbjct: 158 VDKLPYATMGSGSLAAMAVFEAGWKRDMNEEEGKKLVRDA--IAAGIFNDLGSGSNVDLC 215

Query: 184 TLK 186
            ++
Sbjct: 216 VIR 218


>gi|18539490|gb|AAL74417.1| proteosome PSMB5/8 protein [Branchiostoma lanceolatum]
          Length = 194

 Score =  123 bits (310), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 11/176 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T L  +    V++A D + + G  +     +KV  +    ++   AG +AD       L 
Sbjct: 1   TTLAFKWQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAGGAADCSFWERVLA 59

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLE 129
           ++   Y  +        A    +   + N + M L         DK    +     D   
Sbjct: 60  EQCRIYELRNKERISVAAASKLLANIVYNYKGMGLSMGTMIVGWDKRGPGLYYVDSDGTR 119

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
             N + ++GSG +YA     +      S   A E+ ++++  A     Y+   + L
Sbjct: 120 LSNNMFSVGSGSTYAYGVLDSGYKWDMSVEEAYELGKRSIYHATHRDAYSGGVVNL 175


>gi|242000314|ref|XP_002434800.1| proteasome beta2 subunit, putative [Ixodes scapularis]
 gi|215498130|gb|EEC07624.1| proteasome beta2 subunit, putative [Ixodes scapularis]
          Length = 278

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  +   N  K+  +       G AG++AD       
Sbjct: 40  GTTIVGIIFKDGVILGADTRATSGSIIADKNCAKIHYMAPNIYCCG-AGTAADTEKTTNM 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R+      +  + + L   +  I  A      D T  ++        
Sbjct: 99  ISSQLELHRLATGRTVPVCTANRMLKQMLFRYQGHISAALVLGGVDNTGGVLCCIHPHGS 158

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                 + +GSG   A++          + EE   + R A  IAA I   + +  N+ + 
Sbjct: 159 TDRLPYVTMGSGSLAAMAVFERDWKPDMTLEEGKKVVRNA--IAAGIFNDLGSGSNVDIC 216

Query: 184 TLKVG 188
            +   
Sbjct: 217 VITRE 221


>gi|326428157|gb|EGD73727.1| proteasome subunit beta type-7 [Salpingoeca sp. ATCC 50818]
          Length = 272

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     VV+  D + + G  V   N  K+  +       G AG++AD   +   
Sbjct: 31  GTTIAGIIFKDGVVLGADTRATEGTIVADKNCAKIHYMAPNMYCCG-AGTAADTEMVTNL 89

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +  +  R S  +     + + L   +  I  A      D +  ++ +      
Sbjct: 90  VSSQLELHRLETGRQSRVITALRLLKQRLYRYQGHISAALVLGGVDVSGPVLYSIYPHGS 149

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+    A          A+++ R A  IAA I   + +  N+ L 
Sbjct: 150 TDKLPFVTMGSGSLAAMGVFEARYKKDMELDEAKQLVRDA--IAAGIFNDLGSGSNVDLC 207

Query: 184 TLKVG 188
            +   
Sbjct: 208 VITKD 212


>gi|326329709|ref|ZP_08196030.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
 gi|325952474|gb|EGD44493.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
          Length = 278

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G V+IAGD + + G  + + + RKV    + + + G AGS+  A  L++
Sbjct: 46  HGTTIVAATFPGGVIIAGDRRATQGNLIAERDMRKVFPADEYSAV-GIAGSAGLAVELVK 104

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y      +     K  R+   +R   AM +     + L +    D       
Sbjct: 105 LFQTELEHYEKIEGTTLSIEGKASRLSALVRGNLAMAMQGLVVVPLFVGFDPDAGVGKIY 164

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTN 177
                     + G   +GSG  +A  A + L  T    + +     +A+  AAD    T 
Sbjct: 165 GYDPTGGRYEQTGYAGVGSGSLFAKGALKKLYRTDLDEDTLVAVLVQALYDAADDDSATG 224

Query: 178 H 178
            
Sbjct: 225 G 225


>gi|225192937|dbj|BAH29707.1| proteasome subunit, beta type 8 [Oryzias latipes]
          Length = 250

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+ +    V++A D + S G  V      KV  +    ++   +GS+AD      
Sbjct: 68  HGTTTLSFKFKHGVIVAVDSRASTGSYVDTCEYNKVIEINPY-LLGTMSGSAADCKYWER 126

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 127 LLAKECRLYRLRNNHRISVAAASKLLCNMMLGYRGMGLSVGSMICGWDKEGPGIYYVDAN 186

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + + GSG +YA     +      +   A E+ R+ +  A     Y+   + + 
Sbjct: 187 GNRLSGRMFSTGSGSNYAYGVLDSGYKEDMTVEEAYELGRRGIVHATHRDSYSGGVVNMY 246

Query: 184 TLK 186
            ++
Sbjct: 247 HIQ 249


>gi|114626642|ref|XP_001141090.1| PREDICTED: proteasome beta 7 subunit isoform 4 [Pan troglodytes]
          Length = 241

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   +  +A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +   
Sbjct: 220 VISKN 224


>gi|4506203|ref|NP_002790.1| proteasome subunit beta type-7 proprotein [Homo sapiens]
 gi|17380263|sp|Q99436|PSB7_HUMAN RecName: Full=Proteasome subunit beta type-7; AltName:
           Full=Macropain chain Z; AltName: Full=Multicatalytic
           endopeptidase complex chain Z; AltName: Full=Proteasome
           subunit Z; Flags: Precursor
 gi|1531533|dbj|BAA07238.1| proteasome subunit z [Homo sapiens]
 gi|55859676|emb|CAI10873.1| proteasome (prosome, macropain) subunit, beta type, 7 [Homo
           sapiens]
 gi|119607988|gb|EAW87582.1| proteasome (prosome, macropain) subunit, beta type, 7, isoform
           CRA_a [Homo sapiens]
 gi|208967176|dbj|BAG73602.1| proteasome (prosome, macropain) subunit, beta type, 7 [synthetic
           construct]
 gi|317040128|gb|ADU87629.1| epididymis tissue protein Li 177 [Homo sapiens]
          Length = 277

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   +  +A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +   
Sbjct: 220 VISKN 224


>gi|226372034|gb|ACO51642.1| Proteasome subunit beta type-7 precursor [Rana catesbeiana]
          Length = 277

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 67/195 (34%), Gaps = 14/195 (7%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G K  A +   TTI  +     V++  D + + G  V   N  K+  +       G AG+
Sbjct: 33  GHKLPAARKTGTTIAGIVFKDGVILGADTRATEGMVVADKNCSKIHYIASNVYCCG-AGT 91

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTIT 118
           +AD     + +   +E +     R       +  + + L   +  I  A      D +  
Sbjct: 92  AADTEMTTQMISSNVELHSLSTGRLPRVATANRMLKQMLFRYQGYIGAALVLGGVDCSGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--C 173
            + +            + +GSG   A++            EE   + R A  IA+ I   
Sbjct: 152 HLYSIYPHGSTDRLPYVTMGSGSLAAMAVFEDRYRPDMEEEEAKQLVRDA--IASGIFND 209

Query: 174 VYTNHNIVLETLKVG 188
           + +  NI L  +   
Sbjct: 210 LGSGSNIDLCVITKN 224


>gi|189310927|gb|ACD87645.1| 20S proteasome B2 subunit [Anastrepha suspensa]
          Length = 280

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + + G  V   N  K+  L K     G AG++AD     + 
Sbjct: 39  GTTIAGIIFKDGVILGADTRATEGPIVSDKNCSKIHYLAKNMYCCG-AGTAADTEMTTDL 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R    +A +  + ++L   +  I  A      DKT + +        
Sbjct: 98  IASQLEMHRLNTGRQVPVVAANTLLKQFLFRYQGHISAALVLGGVDKTGSYIYCIHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +  +   + EE   + R A  IAA +   + +  NI L 
Sbjct: 158 TDRLPYATMGSGSLAAMSVFESRWTPDMTEEEGKLLVRDA--IAAGVFNDLGSGSNIDLC 215

Query: 184 TLKVG 188
            ++  
Sbjct: 216 VIRKD 220


>gi|67588907|ref|XP_665380.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54656042|gb|EAL35150.1| hypothetical protein Chro.50424 [Cryptosporidium hominis]
          Length = 290

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT L     G V++A D + S G  +     +K+ ++    ++   AG +AD   
Sbjct: 75  MMNRGTTTLGFIYQGGVILAVDSRASQGNYIASQEVKKIIQINDF-LLGTMAGGAADCSY 133

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITG 123
               L K    Y  +             +     +  A  L A       DK    +   
Sbjct: 134 WERVLSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFDKDGPHLYYV 193

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
             +    ++   ++GSG  YA     +      +   A ++ ++A+ IA +    +   +
Sbjct: 194 DNEGSRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSGGLV 253

Query: 181 VLETLKV 187
            +  +  
Sbjct: 254 RVYQINK 260


>gi|149738050|ref|XP_001502170.1| PREDICTED: similar to Proteasome subunit beta type-7 [Equus
           caballus]
          Length = 277

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|114626634|ref|XP_520247.2| PREDICTED: hypothetical protein LOC464723 isoform 5 [Pan
           troglodytes]
 gi|332832851|ref|XP_003312326.1| PREDICTED: hypothetical protein LOC464723 [Pan troglodytes]
 gi|12653475|gb|AAH00509.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Homo
           sapiens]
 gi|48145559|emb|CAG33002.1| PSMB7 [Homo sapiens]
 gi|62897575|dbj|BAD96727.1| proteasome beta 7 subunit proprotein variant [Homo sapiens]
 gi|62898273|dbj|BAD97076.1| proteasome beta 7 subunit proprotein variant [Homo sapiens]
          Length = 277

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   +  +A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +   
Sbjct: 220 VISKN 224


>gi|109110260|ref|XP_001083368.1| PREDICTED: proteasome subunit beta type-7 [Macaca mulatta]
          Length = 277

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|66356810|ref|XP_625583.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
 gi|46226580|gb|EAK87568.1| Pre2p/proteasome subunit beta type 5; NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
          Length = 290

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +    TT L     G V++A D + S G  +     +K+ ++    ++   AG +AD   
Sbjct: 75  MMNRGTTTLGFIYQGGVILAVDSRASQGSYIASQEVKKIIQINDF-LLGTMAGGAADCSY 133

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITG 123
               L K    Y  +             +     +  A  L A       DK    +   
Sbjct: 134 WERVLSKLCRLYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFDKDGPHLYYV 193

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
             +    ++   ++GSG  YA     +      +   A ++ ++A+ IA +    +   +
Sbjct: 194 DNEGSRVKDCKFSVGSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSGGLV 253

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 254 RVYQINKN 261


>gi|256371704|ref|YP_003109528.1| 20S proteasome A and B subunits [Acidimicrobium ferrooxidans DSM
           10331]
 gi|302595816|sp|C7LYP7|PSB_ACIFD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|256008288|gb|ACU53855.1| 20S proteasome A and B subunits [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 273

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI  +R  G VVIAGD + + G  +      KV    + + + G AG++  A  ++ 
Sbjct: 49  HGTTIAALRFAGGVVIAGDRRATEGNFIANRTIEKVFPADRFSGV-GIAGAAGPAVEMVR 107

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE---- 129
             + +LE Y     ++     K  ++ + +R    + +     + L      +  E    
Sbjct: 108 IFQVQLEHYEKVEGKALSLEGKANQLAQMIRQNLPLAMQGLVVMPLFAGWDAERSEGRIF 167

Query: 130 ---------PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E    AIGSGG  A +  +           A  +A +A+  AA     T 
Sbjct: 168 TFDVAGGRYEEVAYYAIGSGGRDARATLKLGWRPGLDEAGAVHLAVQALYEAAQEDAATG 227

Query: 178 H 178
            
Sbjct: 228 G 228


>gi|29833223|ref|NP_827857.1| 20S proteasome beta-subunit [Streptomyces avermitilis MA-4680]
 gi|81716602|sp|Q828I8|PSB2_STRAW RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PrcB 2; Flags: Precursor
 gi|29610345|dbj|BAC74392.1| putative 20S proteasome beta-subunit [Streptomyces avermitilis
           MA-4680]
          Length = 281

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 52  HGTTIVATTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             + +LE +      +     K  R+   +R+  AM +     + L              
Sbjct: 111 LFQLELEHFEKVEGATLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDVDREKGRIF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E+G  + GSG  +A  A + L     +   A  +  +A+  AAD    T 
Sbjct: 171 SYDVTGGRSEEHGYASTGSGSIFARGAMKKLYRDDLTEQQATTLVIQALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|239940100|ref|ZP_04692037.1| putative 20S proteasome beta-subunit [Streptomyces roseosporus NRRL
           15998]
 gi|239986588|ref|ZP_04707252.1| putative 20S proteasome beta-subunit [Streptomyces roseosporus NRRL
           11379]
          Length = 258

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 19/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG++  A  +++
Sbjct: 29  HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVK 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------------DKTITL 119
             + +LE +            K  R+   +R+  AM +                DK    
Sbjct: 88  LFQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDIDRDKGRIF 147

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
                G   E      A GSG  +A  + + L     +   A  +  +A+  AAD    T
Sbjct: 148 SYDVTGGRSEETG-YAATGSGSIFARGSMKKLYREDLTQEQALTLVVQALYDAADDDSAT 206

Query: 177 NH 178
             
Sbjct: 207 GG 208


>gi|240104109|ref|YP_002960418.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
           gammatolerans EJ3]
 gi|302595730|sp|C5A2D5|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
           gammatolerans EJ3]
          Length = 200

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++    VV+A D Q SLG  V   N RK+  +     I   AGS  D   L   
Sbjct: 7   GTTTVGIKVKEGVVLAADTQASLGNMVETLNIRKILPITDRIAITT-AGSVGDVQALARM 65

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           LE +   Y     R     A    +   L   +         +        + +      
Sbjct: 66  LEAQARYYQFTWGRPMTTRAMANLLSNILNENKWFPYMVQIIIGGYVDKPELASVDALGG 125

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH-NIVLET 184
                  A GSG  +A++          S   A+E+A +A+  A    VYT    + +  
Sbjct: 126 LVFEKYTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVKTAGKRDVYTGERKVQVVV 185

Query: 185 LKVG 188
           +   
Sbjct: 186 ITKD 189


>gi|300122116|emb|CBK22690.2| unnamed protein product [Blastocystis hominis]
          Length = 273

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 16/198 (8%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           D H  VK    TT L  +  G V+++ D + + GQ +   +  KV  +    ++   AG 
Sbjct: 56  DSHQMVKFCKGTTTLAFKFQGGVIVSVDSRATQGQFIASNSVHKVIEINPF-LLGTMAGG 114

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-------EAMILIADKTI 117
           +AD +    R+  +   Y  +        A    +  +L +          MI   DKT 
Sbjct: 115 AADCYFWERRMGVEARLYELRNGERISVAAASKILSDFLYHYKDYGLSVGTMICGWDKTG 174

Query: 118 TLVITGMGDVLE----PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
             +     D        +    ++GSG SYA +    L     +   A ++ R+A+  A 
Sbjct: 175 PQIFYVDNDGTRLKADEKRSYFSVGSGSSYAYAVLDQLYHYDMTDDEAIDLGRRAIYHAT 234

Query: 171 DICVYTNHNIVLETLKVG 188
                +     +  +K  
Sbjct: 235 HRDAMSGGINNVYLIKPE 252


>gi|212721760|ref|NP_001132821.1| hypothetical protein LOC100194311 [Zea mays]
 gi|194695490|gb|ACF81829.1| unknown [Zea mays]
 gi|194704048|gb|ACF86108.1| unknown [Zea mays]
 gi|195623962|gb|ACG33811.1| proteasome subunit beta type 5 precursor [Zea mays]
          Length = 280

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    D  V++A D + S+G  +     RK+  +    ++   AG +AD      
Sbjct: 60  KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 118

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+    +     +
Sbjct: 119 NLGTKCRLHELSNKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSE 178

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                    ++GSG  YA            S   A E+AR+A+  A      +   + +
Sbjct: 179 GARLVGNRFSVGSGSLYAYGILDDGYRFSMSVEEAAELARRAIYGATFRDAASGGCVSV 237


>gi|152965839|ref|YP_001361623.1| 20S proteasome A and B subunits [Kineococcus radiotolerans
           SRS30216]
 gi|302595739|sp|A6W970|PSB_KINRD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|151360356|gb|ABS03359.1| 20S proteasome A and B subunits [Kineococcus radiotolerans
           SRS30216]
          Length = 302

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +     VV+AGD + + G  + + + +KV +  + +  AG AG++  A  ++ 
Sbjct: 66  HATTIVALVFADGVVMAGDRRATAGPMIAQRDIQKVFQTDEHS-CAGIAGTAGLAVEMIR 124

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE---- 129
             + +LE +            K  R+   +R    M +     + L      D       
Sbjct: 125 LFQVELEHFEKLEGTLMSFEGKANRLSTMIRANLGMAMQGLAVVPLFAGYDLDAGRGRIV 184

Query: 130 ---------PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E+    +GSG  +A  + + L     S  E   +A +A+  AAD    T 
Sbjct: 185 GYDITGGRSEEHDHHTVGSGSLFARGSLKKLYRPGMSEAETVRVALEALWDAADDDSATG 244

Query: 178 H 178
            
Sbjct: 245 G 245


>gi|120404421|ref|YP_954250.1| 20S proteasome, A and B subunits [Mycobacterium vanbaalenii PYR-1]
 gi|302595775|sp|A1TAP4|PSB_MYCVP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|119957239|gb|ABM14244.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01B [Mycobacterium vanbaalenii
           PYR-1]
          Length = 306

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VV+AGD + + G  +   + +KV       +  G AG++A A     
Sbjct: 66  HGTTIVALKCPGGVVMAGDRRATQGNMIASRDVQKVYITDDYTV-TGIAGTAAIAVEFAR 124

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y      +     K  R+   +R      L     + L+             
Sbjct: 125 LYAVELEHYEKLEGVALTFPGKVNRLATMVRGNLGAALQGFVALPLLAGYDLDDPNPEAA 184

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L S    AE    +A +A+  AAD 
Sbjct: 185 GRIVSFDAAGGWNFEEEGYQSVGSGSIFAKSSMKKLYSQVTDAESALRVAVEALYDAADD 244

Query: 173 CVYTNH 178
              T  
Sbjct: 245 DSATGG 250


>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
 gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
          Length = 199

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 60/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++    VV+A D Q SL   V   N +K+  +     I   AGS  D   L   
Sbjct: 6   GTTTVGIKVKEGVVLAADTQASLDHMVETLNIKKILPITDRIAITT-AGSVGDVQMLARM 64

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           LE +   Y     +     A    +   L   +         +        +        
Sbjct: 65  LEAEARYYQFTWGKPMTAKAMANLLSNILNENKWFPYLVQIIIGGYVEEPTLANLDPLGG 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH-NIVLET 184
              +   A GSG  +A++          S   A E+A +A+  A    VYT    I +  
Sbjct: 125 LIFDDYTATGSGSPFAIAILEEGYRKDMSIEEARELAIRAVRTAGKRDVYTGDRKIQVVV 184

Query: 185 LKVG 188
           +   
Sbjct: 185 ITKE 188


>gi|119716870|ref|YP_923835.1| proteasome subunit beta [Nocardioides sp. JS614]
 gi|302595778|sp|A1SK13|PSB_NOCSJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|119537531|gb|ABL82148.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01B [Nocardioides sp. JS614]
          Length = 283

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AGS+  A  ++ 
Sbjct: 47  HGTTIVAATFPGGVVMAGDRRATMGNIIAQRDIEKVFPADEFSAV-GIAGSAGLAVEMVR 105

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
             + +LE Y      +     K  R+   +R+   M +     + L              
Sbjct: 106 LFQTELEHYEKIEGSTLSMDGKANRLAALIRSNLGMAMQGLAVVPLFAGFDLASNQGRIF 165

Query: 126 -----DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTN 177
                     E    ++GSG  +A  + + L     +AE   +   +A+  AAD    T 
Sbjct: 166 SYDVTGGRYEETAFHSVGSGSLFARGSLKKLYRDDLTAEQTVQAVVEALYDAADDDSATG 225

Query: 178 H 178
            
Sbjct: 226 G 226


>gi|326524101|dbj|BAJ97061.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 279

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L+   D  V++A D + S+G  +     RK+  +    ++   AG +AD      
Sbjct: 59  KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 118 NLGVKCRLHELANKRRISIAGSSKTLANILYSYRGMGLSIGTMIAGFDETGPGLYYVDSE 177

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +    ++GSG  YA            S   A E+AR+A+  A      +   + +
Sbjct: 178 GARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSV 236


>gi|189067246|dbj|BAG36956.1| unnamed protein product [Homo sapiens]
          Length = 277

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++     +      EE   +  +A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKLRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +   
Sbjct: 220 VISKN 224


>gi|302926861|ref|XP_003054378.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735319|gb|EEU48665.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 269

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISPQIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTLLKQHLFRYQGYIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S          S EE  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKPDLSEEEAVKLASDAILAGIWNDLGSGSNVDVAVI 207

Query: 186 KVG 188
              
Sbjct: 208 TKD 210


>gi|84370087|ref|NP_001033616.1| proteasome subunit beta type-7 precursor [Bos taurus]
 gi|122137066|sp|Q2TBP0|PSB7_BOVIN RecName: Full=Proteasome subunit beta type-7; Flags: Precursor
 gi|83638689|gb|AAI09869.1| Proteasome (prosome, macropain) subunit, beta type, 7 [Bos taurus]
          Length = 277

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|2582504|gb|AAB82570.1| 20S proteasome beta2 subunit [Drosophila melanogaster]
          Length = 272

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + 
Sbjct: 39  GTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDL 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +  Q  R    +A +  + + L   +  I  A      DKT   + +      
Sbjct: 98  ISSQLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             +     +GSG   A++   +      S EE   + R A        + +  NI L  +
Sbjct: 158 SDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDADPTGVFNDLGSGSNIDLCVI 217

Query: 186 KVG 188
           + G
Sbjct: 218 RKG 220


>gi|34783288|gb|AAH17116.2| PSMB7 protein [Homo sapiens]
          Length = 256

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 22  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 80

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 81  ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 140

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   +  +A  IAA I   + +  NI L 
Sbjct: 141 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLC 198

Query: 184 TLKVG 188
            +   
Sbjct: 199 VISKN 203


>gi|256376367|ref|YP_003100027.1| 20S proteasome A and B subunits [Actinosynnema mirum DSM 43827]
 gi|302595817|sp|C6WID8|PSB_ACTMD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|255920670|gb|ACU36181.1| 20S proteasome A and B subunits [Actinosynnema mirum DSM 43827]
          Length = 282

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G VVIAGD + ++G  + + + +KV      + + G AG++  A  ++ 
Sbjct: 54  HGTTIVALTFKGGVVIAGDRRATMGNVIAQRDMKKVFVTDDYSAV-GIAGTAGIAIEIVR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +L  Y      S     K  R+   ++      L     + L +            
Sbjct: 113 LFAVELRHYEKIEGVSLSLDGKANRLSGMVKGNLDAALAGLAVVPLFVGYDTDAADPDRA 172

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
                    G   E   G  ++GSG  +A SA + L      AE   R   +A+  AAD 
Sbjct: 173 GRIVSYDVTGARFEETLGYQSVGSGSLFAKSALKKLYDPDADAEGAVRAAVEALYDAADD 232

Query: 173 CVYTNH 178
              T  
Sbjct: 233 DSATGG 238


>gi|52548240|gb|AAU82107.1| 20S proteasome beta 5 subunit [Triticum aestivum]
          Length = 279

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L+   D  V++A D + S+G  +     RK+  +    ++   AG +AD      
Sbjct: 59  KGTTTLSFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 118 NLGVKCRLHELANKRRISIAGSSKTLANILYSYRGMGLSIGTMIAGFDETGPGLYYVDSE 177

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +    ++GSG  YA            S   A E+AR+A+  A      +   + +
Sbjct: 178 GARLKGSRFSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSV 236


>gi|111222291|ref|YP_713085.1| 20S proteasome subunit beta [Frankia alni ACN14a]
 gi|111149823|emb|CAJ61517.1| 20S proteasome beta-subunit [Frankia alni ACN14a]
          Length = 259

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 70/188 (37%), Gaps = 17/188 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + + G  + + +  KV      +   G+AG++     L+ 
Sbjct: 36  HGTTIVAVTFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDFS-CVGYAGTAGVGAELIR 94

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y      +    AK  R+   ++    M L     + L      D+      
Sbjct: 95  LFQVELEHYEKIEGATLSLDAKANRLAAMVKGNLPMALQGLAVVPLFAGYDPDLDKGRIF 154

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTN 177
                     E    +IGSG  +A  + +           A  IA +A+  AAD    T 
Sbjct: 155 SYDIAAAKSEERTYESIGSGSVFAKGSLKKRFRVDLTQDDAVRIAVEALYDAADDDSATG 214

Query: 178 HNIVLETL 185
               +  L
Sbjct: 215 GPDTIRKL 222


>gi|296482169|gb|DAA24284.1| proteasome beta 7 subunit precursor [Bos taurus]
          Length = 277

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|296190795|ref|XP_002743351.1| PREDICTED: proteasome subunit beta type-7-like [Callithrix jacchus]
          Length = 277

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFKPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|225719232|gb|ACO15462.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
 gi|225719406|gb|ACO15549.1| Proteasome subunit beta type-5 precursor [Caligus clemensi]
          Length = 270

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  + +G  ++A D + + G  +   + RK+  +    ++A  AG +AD      
Sbjct: 60  HGTTTLGFKYEGGTILAVDSRATSGGYIGSGSVRKIIEVSDY-LLATMAGGAADCMYWDR 118

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L      Y  +        A    +       + M L         DK    +     +
Sbjct: 119 VLATDCRLYELRNHCRISVAAASKLLANNAYRYKGMGLSMGAMIAGYDKRGPGLYYVDSE 178

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                  + ++GSG  YA     A      +   A E+ R+A++ A      +   + + 
Sbjct: 179 GSRTPGNLFSVGSGSVYAYGVLDADYRYDLTDEEAYELGRRAIAHATYRDAASGGIVRVM 238

Query: 184 TLKVG 188
            +   
Sbjct: 239 HVTKE 243


>gi|301769261|ref|XP_002920046.1| PREDICTED: proteasome subunit beta type-7-like [Ailuropoda
           melanoleuca]
 gi|281350176|gb|EFB25760.1| hypothetical protein PANDA_008725 [Ailuropoda melanoleuca]
          Length = 277

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|301120664|ref|XP_002908059.1| proteasome subunit beta type-5, putative [Phytophthora infestans
           T30-4]
 gi|262103090|gb|EEY61142.1| proteasome subunit beta type-5, putative [Phytophthora infestans
           T30-4]
          Length = 288

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 16/198 (8%)

Query: 6   DKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           D   ++K    TT L    +G +V+A D + ++G  +     +KV  + +  I+A  AG 
Sbjct: 72  DNEQSLKFAKGTTTLAFIYNGGIVVAVDSRSTMGPFIASQQVKKVNPINEY-ILATLAGG 130

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKD-------WRMDKYLRNLEAMILIADKTI 117
           +AD       L  +   Y  +        A             +Y  +L  M++  D   
Sbjct: 131 AADCQFWQRNLAVQCRMYELRNRHRISVRAASKLIANTCNYYKRYGMSLGMMMMGYDNGE 190

Query: 118 TLVITGMGDVLEP----ENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
            ++     +        +    ++GSG +YA            +   A E+ ++A+  A 
Sbjct: 191 PVLYYVDDEGSRIPASKDVPKFSVGSGSTYAYGVLDTNWRWDLTDDEAVELGKRAIYHAT 250

Query: 171 DICVYTNHNIVLETLKVG 188
               Y+     +   K  
Sbjct: 251 HRDAYSGGFCNVFVFKPE 268


>gi|225716364|gb|ACO14028.1| Proteasome subunit beta type-7 precursor [Esox lucius]
          Length = 277

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 14/196 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           +G    A +   TTI  V     +V+  D + + G  V   N  K+  +       G AG
Sbjct: 32  LGHSIPAARKTGTTICGVVFKDGIVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AG 90

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTI 117
           ++AD     + +   LE +     R       +  + + L   +  I  A      D   
Sbjct: 91  TAADTEMTTQIISSNLELHSLSTGRLPRVATANRMLKQMLFRYQGHIGAALVLGGVDCNG 150

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI-- 172
             + +        +   + +GSG   A++              A+ + R A  IAA I  
Sbjct: 151 PHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYEQNMEEEDAKRLVRDA--IAAGIFN 208

Query: 173 CVYTNHNIVLETLKVG 188
            + +  NI L  +  G
Sbjct: 209 DLGSGSNIDLCVITKG 224


>gi|170291023|ref|YP_001737839.1| proteasome endopeptidase complex [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|302595829|sp|B1L6S7|PSB1_KORCO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|170175103|gb|ACB08156.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 206

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 11/186 (5%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + M  TT + V+    V++A D + + G  V   +A K  ++     +A  +G  AD   
Sbjct: 1   MLMKGTTTVGVKFKNGVIVASDKRATSGTFVASKSAVKTLKITDY-AVATISGLVADGQY 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITG 123
           L+  +    + Y     R          +   LR      L+A       D+    +   
Sbjct: 60  LVNNVRTIADLYSLDTERPLSVRGIARILAFLLRRYRPYFLLAQLIVGGVDREGAHLFNV 119

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNI 180
                  E   +A GSG   A+S   +  S      SA  +   +M+ A      T   I
Sbjct: 120 DPFGTLTEEDYLATGSGSPVAISVIESGYSPDMDRESALRLVISSMTAALSRDAATGDGI 179

Query: 181 VLETLK 186
            +  + 
Sbjct: 180 DVVVID 185


>gi|84496445|ref|ZP_00995299.1| putative 20S proteasome beta-subunit [Janibacter sp. HTCC2649]
 gi|84383213|gb|EAP99094.1| putative 20S proteasome beta-subunit [Janibacter sp. HTCC2649]
          Length = 280

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+T+  +G V++AGD + ++G  +   +  KV    + +++ G AG++  A  L+ 
Sbjct: 50  HGTTIVTLSYEGGVLMAGDRRATMGNIIANRDMEKVFATDEFSVV-GIAGTAGLAIELVR 108

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
             + +LE Y            K  R+   +R    M +     + +              
Sbjct: 109 LFQVELEHYEKIEGTLMSLEGKANRLASMIRGNLGMAMQGLSVVPVFAGFDHHGQCGRIF 168

Query: 126 -----DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E+   ++GSG  +A  A + L     S   A  IA +A+  AAD    T 
Sbjct: 169 SYDVTGGCYEEHDHHSVGSGSLFARGALKKLYRPGMSSDEAVRIAVEALWDAADDDSATG 228

Query: 178 H 178
            
Sbjct: 229 G 229


>gi|302595911|sp|Q0RLT7|PSB_FRAAA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|6492303|gb|AAF14267.1|AF142435_3 20S proteasome beta-subunit precursor [Frankia sp. ACN14a/ts-r]
          Length = 274

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 70/188 (37%), Gaps = 17/188 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + + G  + + +  KV      +   G+AG++     L+ 
Sbjct: 51  HGTTIVAVTFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDFS-CVGYAGTAGVGAELIR 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y      +    AK  R+   ++    M L     + L      D+      
Sbjct: 110 LFQVELEHYEKIEGATLSLDAKANRLAAMVKGNLPMALQGLAVVPLFAGYDPDLDKGRIF 169

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTN 177
                     E    +IGSG  +A  + +           A  IA +A+  AAD    T 
Sbjct: 170 SYDIAAAKSEERTYESIGSGSVFAKGSLKKRFRVDLTQDDAVRIAVEALYDAADDDSATG 229

Query: 178 HNIVLETL 185
               +  L
Sbjct: 230 GPDTIRKL 237


>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           fervens AG86]
 gi|302595745|sp|C7P6N4|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           fervens AG86]
          Length = 224

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 13/188 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  TT + +  D  V++A D + S+G  V    A+K+ ++     +   AGS  DA  ++
Sbjct: 4   MKGTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIAL-TIAGSVGDAQAIV 62

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGM 124
             L  + + Y  +  ++   LA    +   L +      +    I          + +  
Sbjct: 63  RLLTAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLD 122

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
               +  E    A GSG   A     A        EE   +A KA+  A +   Y+ + I
Sbjct: 123 PLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMPVEEGIKLALKALKSAMERDTYSGNGI 182

Query: 181 VLETLKVG 188
            L  +   
Sbjct: 183 SLAVITKE 190


>gi|209733846|gb|ACI67792.1| Proteasome subunit beta type-7 precursor [Salmo salar]
          Length = 277

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTICGVVFKDGLVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R       +  + + L   +  I  A      D     + +      
Sbjct: 102 ISSNLELHSLSTSRLPRVATANRMLKQMLFRYQGHIGAALVLGGVDCNGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++              A+ + R A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDRYKQDMEEEDAKRLVRDA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +  G
Sbjct: 220 VITKG 224


>gi|198456605|ref|XP_001360388.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
 gi|198135674|gb|EAL24963.2| GA22086 [Drosophila pseudoobscura pseudoobscura]
          Length = 321

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G VV+  D + + GQ +     +K+  L    ++   AG +AD      
Sbjct: 70  HGTTTLGFRYQGGVVLCADSRATSGQYIGSQTMKKIVELNDY-MLGTLAGGAADCVYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L +    +  +  R     A    +       + M L+        D     +I    +
Sbjct: 129 VLARDSRLHELRFKRRLSVDAAARMIVNISAEYKGMGLVMGMMLAGYDDEGPKLIYVDSE 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNH 178
            +     V A+GSG  YAL           T   A ++AR+A+  A     Y+  
Sbjct: 189 GMRCHGNVFAVGSGSPYALGVLDTGHRFTMTDQEAFDLARRAIYHATSKDAYSGG 243


>gi|320169928|gb|EFW46827.1| LMP X [Capsaspora owczarzaki ATCC 30864]
          Length = 295

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 14/180 (7%)

Query: 6   DKHYAVKMH---ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           D H  VK+H    TT L  +    +++A D + + G  +     +KV  +    ++   A
Sbjct: 88  DPHSKVKIHIQHGTTTLAFKFKHGIIVAVDSRATGGSYIASGTVKKVIEINPY-LLGTMA 146

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DK 115
           G +AD       L ++   Y  +        A    +   +   + M L         DK
Sbjct: 147 GGAADCSFWERELARRCRIYELRNKERISVAAASKLLANMVYGYKNMGLSMGTMITGWDK 206

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI 172
               +     D       + ++GSG +YA     A      + E   E+ R+++  A  +
Sbjct: 207 RGPELYYVDSDGTRLHGDMFSVGSGSTYAYGVLDAGFRYDMTPEEACELGRRSIYHATHL 266


>gi|209734272|gb|ACI68005.1| Proteasome subunit beta type-7 precursor [Salmo salar]
          Length = 277

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTICGVVFKDGLVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R       +  + + L   +  I  A      D     + +      
Sbjct: 102 ISSNLELHSLSTSRLPRVATANRMLKQMLFRYQGHIGAALVLGGVDCNGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++              A+ + R A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDRYKQDMEEEDAKRLVRDA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +  G
Sbjct: 220 VITKG 224


>gi|297161888|gb|ADI11600.1| proteasome subunit beta [Streptomyces bingchenggensis BCW-1]
          Length = 258

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + +  KV    + + + G AG+   A  +++
Sbjct: 29  HGTTIVGATFPGGVVLAGDRRATMGNLISQRDVEKVFPADEYSAV-GIAGTLGFAVEMVK 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------------DKTITLVI 121
             + +LE +      +     K  R+   +R    M +              D+    + 
Sbjct: 88  LFQLELEHFEKVEGTTLSLEGKANRLSTMIRGNLGMAMQGLAVVPIFAGWDVDREKGRIF 147

Query: 122 TGM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
           +         E+G  A GSG  +A  A + L     +  +      +A+  AAD    T 
Sbjct: 148 SYDVTGGRSEEHGFAATGSGSLFARGALKKLYREDLTESDTAIAVVQALYDAADEDSATG 207

Query: 178 H 178
            
Sbjct: 208 G 208


>gi|86741318|ref|YP_481718.1| proteasome subunit beta [Frankia sp. CcI3]
 gi|86568180|gb|ABD11989.1| proteasome endopeptidase complex, beta component. Threonine
           peptidase. MEROPS family T01B [Frankia sp. CcI3]
          Length = 304

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 17/188 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + + G  + + +  KV      +   G+AG++     L+ 
Sbjct: 81  HGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDYS-CVGYAGTAGVGAELIR 139

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y      +    AK  R+   ++    M L     + L      D       
Sbjct: 140 LFQVELEHYEKIEGSTLSLDAKANRLAAMVKGNLPMALQGLAVVPLFAGYDLDTGKGRIF 199

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E    +IGSG  +A  + +    +  S   A  I+ +A+  AAD    T 
Sbjct: 200 SYDIAAAKSEERTYESIGSGSVFAKGSLKKRFRSDLSQDDAVRISVEALYDAADDDSATG 259

Query: 178 HNIVLETL 185
              V+  L
Sbjct: 260 GPDVIRKL 267


>gi|229493495|ref|ZP_04387280.1| proteasome, beta subunit [Rhodococcus erythropolis SK121]
 gi|229319456|gb|EEN85292.1| proteasome, beta subunit [Rhodococcus erythropolis SK121]
          Length = 277

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + ++G  +   + +KV      +  AG AG++  A  L+ 
Sbjct: 43  HGTTIVAISYAGGVLLAGDRRATMGNLIASRDVQKVYVTDDYSA-AGIAGTAGIAIELVR 101

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 102 LFAVELEHYEKIEGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGYDLDAVDPSTA 161

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A SA + L S    +++A   A +A+  AAD 
Sbjct: 162 GRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKLYSPGIDEDTALRFAVEALYDAADD 221

Query: 173 CVYTNH 178
              T  
Sbjct: 222 DSATGG 227


>gi|195431433|ref|XP_002063746.1| GK15836 [Drosophila willistoni]
 gi|194159831|gb|EDW74732.1| GK15836 [Drosophila willistoni]
          Length = 283

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + GQ +     +KV  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKYQGGVILAVDSRATGGQYIGSQTMKKVVEI-NQFLLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD-------KYLRNLEAMILIADKTITLVITGMGD 126
            L K+   +  +        A    M            ++  M+   DK    +     +
Sbjct: 131 VLAKECRMHELRNKERISVAAASKIMANIAHEYKNMGLSMGMMLAGYDKRGPGLYYVDSE 190

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                  + ++GSG  YA     +          A+E+ R+++  A     Y+   I +
Sbjct: 191 GSRTAGNLFSVGSGSLYAYGVLDSGYHWNLKDEEAQELGRRSIYHATFRDAYSGGIIRV 249


>gi|242011222|ref|XP_002426354.1| proteasome subunit beta type 7 precursor, putative [Pediculus
           humanus corporis]
 gi|212510431|gb|EEB13616.1| proteasome subunit beta type 7 precursor, putative [Pediculus
           humanus corporis]
          Length = 276

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     V++  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 38  GTTIVGVIFKDGVILGADTRATEGSIVSDKNCSKIHYIADNMYCCG-AGTAADTEMTTQM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +L+       R    +  +  + + L   +  I  A      D T   +        
Sbjct: 97  IASQLKLQQLNTGREVPVVTANRILKQLLFRYQGHIGAALVLGGVDSTGPHIFCIHPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A++   A        EE   +  +A+   A I   + +  N+ + 
Sbjct: 157 TAKLPYATMGSGSLAAMAVFEAKWKPDLEEEEAKQLVSEAIQ--AGIFNDLGSGGNVDMC 214

Query: 184 TLKVG 188
            +K G
Sbjct: 215 VIKKG 219


>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           vulcanius M7]
 gi|302595760|sp|C9REN7|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           vulcanius M7]
          Length = 223

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 13/188 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  TT + +  D  V++A D + S+G  +    A+K+ ++    I    AGS  DA  ++
Sbjct: 4   MKGTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKIDDY-IAMTIAGSVGDAQAIV 62

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG------- 125
             L  +   Y  +  ++    A    +   L +      +    I       G       
Sbjct: 63  RALIAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLD 122

Query: 126 --DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
               +  E    + GSG   A     A      S EE   +A KA+  A +   Y+ + +
Sbjct: 123 PLGGMNEEKTFTSTGSGSPIAYGVLEAEYDRDMSIEEGLKLALKALKSAMERDTYSGNGV 182

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 183 SVAVITKE 190


>gi|325182083|emb|CCA16537.1| proteasome subunit beta type7 putative [Albugo laibachii Nc14]
          Length = 320

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 12/197 (6%)

Query: 3   VMGDKHYAVKM--HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           +M D +  +K     TTI  V     VV+  D + + G  VM  N  K+  +       G
Sbjct: 63  LMQDGNLTIKAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCG 122

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------D 114
            AG++AD       +  +LE +       S  +     + + L   +  I  A      D
Sbjct: 123 -AGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVD 181

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
            T   + T        +   + +GSG   A+S          + EE   + + A+     
Sbjct: 182 ATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVF 241

Query: 172 ICVYTNHNIVLETLKVG 188
             + +  N+ +  +K G
Sbjct: 242 NDLGSGSNVDITIIKKG 258


>gi|71747590|ref|XP_822850.1| proteasome subunit beta 5 [Trypanosoma brucei TREU927]
 gi|10185394|emb|CAC08538.1| proteasome PRCE (beta-5) subunit precursor [Trypanosoma brucei]
 gi|70832518|gb|EAN78022.1| proteasome beta 5 subunit, putative [Trypanosoma brucei]
 gi|261332661|emb|CBH15656.1| proteasome beta 5 subunit, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 310

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    DG ++IA D + S GQ +      KV  + +  ++   AG +AD      
Sbjct: 105 KGTTTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLEINEY-LLGTMAGGAADCQYWER 163

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +                M+   D+    +      
Sbjct: 164 VLGMECRLWELRNNCRISVAAASKILANITYQYRNHGLSMGTMVAGWDQFGPSLYYVDDK 223

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
               ++ + ++GSG  YA            + EE   +AR+++  A      +   + +
Sbjct: 224 GTRVKHEIFSVGSGSIYAYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIVTV 282


>gi|281343379|gb|EFB18963.1| hypothetical protein PANDA_015662 [Ailuropoda melanoleuca]
          Length = 256

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 67/186 (36%), Gaps = 11/186 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            H     H TT L  R    V+ A D + S G  V    +RK+  + +  ++   +G+SA
Sbjct: 41  SHGPGLAHGTTTLAFRFRHGVIAAADTRSSCGNYVQCPASRKIIPVHQH-LLGTTSGTSA 99

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITL 119
           D  T    L ++L     +  +          +   L     + L         D++   
Sbjct: 100 DCATWYRVLRRELRLRALREGQPPSVAGAARLLSAMLSRYRGLDLCVATALCGWDRSGPA 159

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
           +     D       V ++GSG  YA            S +E   +AR A++ A     Y+
Sbjct: 160 LFYVYSDGTRLPGNVFSVGSGSPYAYGVLDRGYRYDMSPQEAYALARCAVAHATHRDAYS 219

Query: 177 NHNIVL 182
             ++ L
Sbjct: 220 GGSVDL 225


>gi|297560457|ref|YP_003679431.1| 20S proteasome A and subunit betas [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296844905|gb|ADH66925.1| 20S proteasome A and B subunits [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 280

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 17/180 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           ATTI+ +   G V++AGD + + G  +   +  KV R  + + +A  AGS+     L   
Sbjct: 52  ATTIVALTFPGGVLLAGDRRATQGNIIANRDMEKVFRTDEYSAVA-IAGSAGFGIELARL 110

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM---------- 124
            + +LE Y     RS     K  ++ + +R    + +     + L++             
Sbjct: 111 YQVELEHYEKMEGRSLSLEGKANKLAQMVRGNLGLAMQGFVVVPLLVGYDENTGQGRVFS 170

Query: 125 ---GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
                    E    +IGSG  +A  A + L         A ++A +A+  AAD    T  
Sbjct: 171 YDATGGRYEEQRYHSIGSGSVFARGAIKKLYRDDLDQTGAAKVALEALYDAADDDSATGG 230


>gi|301781286|ref|XP_002926066.1| PREDICTED: proteasome subunit beta type-11-like [Ailuropoda
           melanoleuca]
          Length = 291

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 67/186 (36%), Gaps = 11/186 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            H     H TT L  R    V+ A D + S G  V    +RK+  + +  ++   +G+SA
Sbjct: 41  SHGPGLAHGTTTLAFRFRHGVIAAADTRSSCGNYVQCPASRKIIPVHQH-LLGTTSGTSA 99

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITL 119
           D  T    L ++L     +  +          +   L     + L         D++   
Sbjct: 100 DCATWYRVLRRELRLRALREGQPPSVAGAARLLSAMLSRYRGLDLCVATALCGWDRSGPA 159

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
           +     D       V ++GSG  YA            S +E   +AR A++ A     Y+
Sbjct: 160 LFYVYSDGTRLPGNVFSVGSGSPYAYGVLDRGYRYDMSPQEAYALARCAVAHATHRDAYS 219

Query: 177 NHNIVL 182
             ++ L
Sbjct: 220 GGSVDL 225


>gi|325182084|emb|CCA16538.1| proteasome subunit beta type7 putative [Albugo laibachii Nc14]
          Length = 314

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 12/197 (6%)

Query: 3   VMGDKHYAVKM--HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           +M D +  +K     TTI  V     VV+  D + + G  VM  N  K+  +       G
Sbjct: 57  LMQDGNLTIKAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCG 116

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------D 114
            AG++AD       +  +LE +       S  +     + + L   +  I  A      D
Sbjct: 117 -AGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVD 175

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
            T   + T        +   + +GSG   A+S          + EE   + + A+     
Sbjct: 176 ATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVF 235

Query: 172 ICVYTNHNIVLETLKVG 188
             + +  N+ +  +K G
Sbjct: 236 NDLGSGSNVDITIIKKG 252


>gi|10803370|emb|CAC13117.1| low molecular mass polypeptide subunit PSMB8 [Takifugu rubripes]
          Length = 272

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 65/176 (36%), Gaps = 8/176 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +A+KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFKHGVIVAVDSRASAGKYISSQDAKKVIEINSY-LLGTMSGSAADCMYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL----VITGMGDVLE 129
            L K+   Y  +        A    +   +     M L     I      +     +   
Sbjct: 129 LLAKECRLYRLRNNHRISVAAASKLLANMMLGYRGMGLSVGSMICGWDKQLYYVDENGNR 188

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
               + + GSG SYA +   + +    + EE   + R+ +  A     Y+   + +
Sbjct: 189 FSGQMFSTGSGNSYAYAVVDSGLREDMTVEEAYDLGRRGIVYATHRDAYSGGVVNM 244


>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
 gi|302595734|sp|C6A3R1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
          Length = 199

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++    VV+A D Q SL   V   N +K+  +     I   AGS  D   L   
Sbjct: 6   GTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDRIAITT-AGSVGDLQALARM 64

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           LE + + Y     +     A    +   L   +         +        + +      
Sbjct: 65  LEAEAKYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQIIIGGYVEEPTLASLDPLGG 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH-NIVLET 184
              +     GSG  +A++          S   A E+A KA+  A    VYT    I + T
Sbjct: 125 LIFDNYTTTGSGSPFAIAILEDGYKEDMSIEDARELAIKAVRTAGKRDVYTGERKIQVIT 184

Query: 185 LKVG 188
           +   
Sbjct: 185 ITKE 188


>gi|30585303|gb|AAP36924.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 7
           [synthetic construct]
 gi|60653627|gb|AAX29507.1| proteasome beta type subunit 7 [synthetic construct]
          Length = 278

 Score =  122 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNRSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   +  +A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +   
Sbjct: 220 VISKN 224


>gi|325182082|emb|CCA16536.1| proteasome subunit beta type7 putative [Albugo laibachii Nc14]
          Length = 311

 Score =  122 bits (305), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 12/197 (6%)

Query: 3   VMGDKHYAVKM--HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           +M D +  +K     TTI  V     VV+  D + + G  VM  N  K+  +       G
Sbjct: 54  LMQDGNLTIKAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCG 113

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------D 114
            AG++AD       +  +LE +       S  +     + + L   +  I  A      D
Sbjct: 114 -AGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVD 172

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
            T   + T        +   + +GSG   A+S          + EE   + + A+     
Sbjct: 173 ATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVF 232

Query: 172 ICVYTNHNIVLETLKVG 188
             + +  N+ +  +K G
Sbjct: 233 NDLGSGSNVDITIIKKG 249


>gi|311900014|dbj|BAJ32422.1| putative 20S proteasome beta-subunit [Kitasatospora setae KM-6054]
          Length = 281

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 18/182 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+    DG VV+AGD + ++G  + + +  KV    + + + G AG++  A  ++ 
Sbjct: 51  HGTTIVAAVFDGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAV-GIAGTAGLAVEMVR 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------- 120
             + +LE Y            K  R+   +R+  AM +     + +              
Sbjct: 110 LFQLELEHYEKIEGTVLSLEGKANRLTTMIRSNLAMAMQGLAVVPVFAGYDLDLGRGRIF 169

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
                G   E   G  A GSG  +A  + + L     +   A  +A +A+  A D    T
Sbjct: 170 TYDVTGGRSEERAGFAATGSGSVFARGSMKKLYRDGLNGDQAATLAVQALYDADDDDSAT 229

Query: 177 NH 178
             
Sbjct: 230 GG 231


>gi|90076452|dbj|BAE87906.1| unnamed protein product [Macaca fascicularis]
          Length = 277

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 12/184 (6%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD    
Sbjct: 40  QKTGTTIAGVVYKDGMVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMT 98

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMG 125
            + +   LE +     R    +  +  + + L   +  I  A      D T   + +   
Sbjct: 99  TQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYP 158

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIV 181
                +   + +GSG   A++            EE A+K  + +IAA I   + +  NI 
Sbjct: 159 HGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNID 217

Query: 182 LETL 185
           L  +
Sbjct: 218 LCVI 221


>gi|209733376|gb|ACI67557.1| Proteasome subunit beta type-7 precursor [Salmo salar]
          Length = 288

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTICGVVFKDGLVLGADTRATEGMIVADKNCSKIHYISPNIYCCG-AGTAADTEMTTQI 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R       +  + + L   +  I  A      D     + +      
Sbjct: 102 ISSNLELHSLSTSRLPRVAIANRMLKQMLFRYQGHIGAALVLGGVDCNGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++              A+ + R A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDRYKQDMGEEDAKRLVRDA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +  G
Sbjct: 220 VITKG 224


>gi|157876794|ref|XP_001686739.1| proteasome beta 5 subunit [Leishmania major strain Friedlin]
 gi|68129814|emb|CAJ09120.1| putative proteasome beta 5 subunit [Leishmania major strain
           Friedlin]
          Length = 302

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  R +G +++A D + S GQ +      KV  +    ++   AG +AD      
Sbjct: 98  KGTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLEINDY-LLGTLAGGAADCQYWER 156

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +                M+   D+    +      
Sbjct: 157 VLGMECRLWELRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDEFGPSLYYVDDK 216

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +  + ++GSG  YA            S   A ++AR+++  A      +   + +
Sbjct: 217 GSRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTV 275


>gi|30583275|gb|AAP35882.1| proteasome (prosome, macropain) subunit, beta type, 7 [Homo
           sapiens]
 gi|61361481|gb|AAX42054.1| proteasome subunit beta type 7 [synthetic construct]
          Length = 277

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNRSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   +  +A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TLKVG 188
            +   
Sbjct: 220 VISKN 224


>gi|146104190|ref|XP_001469755.1| proteasome beta 5 subunit [Leishmania infantum]
 gi|134074125|emb|CAM72867.1| putative proteasome beta 5 subunit [Leishmania infantum JPCM5]
 gi|322503525|emb|CBZ38611.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 302

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  R +G +++A D + S GQ +      KV  +    ++   AG +AD      
Sbjct: 98  KGTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLEINDY-LLGTLAGGAADCQYWER 156

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +                M+   D+    +      
Sbjct: 157 VLGMECRLWELRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDQFGPSLYYVDDK 216

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +  + ++GSG  YA            S   A ++AR+++  A      +   + +
Sbjct: 217 GSRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTV 275


>gi|57642142|ref|YP_184620.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
 gi|74505318|sp|Q5JHL8|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
          Length = 199

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +R    VV+A D Q SL   V   N RK+  +     I   AGS  D   L   
Sbjct: 6   GTTTVGIRTKEGVVLAADTQASLDHMVETLNIRKILPITDRIAITT-AGSVGDVQALARM 64

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           LE +   Y     R     A    +   L   +         +        +        
Sbjct: 65  LEAEARYYQFTWGRPMTAKAMAHLLSNILNENKWFPYMVQIIIGGYVEEPTLANLDPLGG 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH-NIVLET 184
              +   A GSG  +A++          S   A+E+A +A+  A    VYT    + +  
Sbjct: 125 LIFDDYTATGSGSPFAIAVLEDGFRKDMSLEEAKELAVRAVRTAGKRDVYTGDRKVQVVV 184

Query: 185 LKVG 188
           +   
Sbjct: 185 ISKD 188


>gi|195018492|ref|XP_001984791.1| GH16666 [Drosophila grimshawi]
 gi|193898273|gb|EDV97139.1| GH16666 [Drosophila grimshawi]
          Length = 272

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ V     VV+  D + + G  V   N  K+  L       G AG++AD     + +  
Sbjct: 42  IVGVIYKDGVVLGADTRATEGPIVSDKNCAKIHYLADNIYCCG-AGTAADTEMTTDLISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +     R    +  +  + + L   +  I  A      DK    +          +
Sbjct: 101 QLELHRLSTERQVPVVCANNILKQMLFRYQGHISAALVLGGVDKYGPHIYCIHPHGSADK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A++   +      + EE   + R A  IA+ I   + +  N+ L  ++
Sbjct: 161 LPYATMGSGSLAAMAVFESRWKPDLTEEEAKLLVRDA--IASGIFNDLGSGSNVDLCVIR 218

Query: 187 VG 188
             
Sbjct: 219 KD 220


>gi|109082918|ref|XP_001105225.1| PREDICTED: proteasome subunit beta type-11 isoform 1 [Macaca
           mulatta]
          Length = 300

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    + KV  + +  ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQH-LLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L+++L     +  +     +    +   +     + L         D++  ++
Sbjct: 101 CATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSRYRGLDLCVATALCGWDRSGPML 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            S   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTRLQGNIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|322490747|emb|CBZ26011.1| putative proteasome beta 5 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 302

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  R +G +++A D + S GQ +      KV  +    ++   AG +AD      
Sbjct: 98  KGTTTLAFRFNGGIIVAVDSRASTGQYIASQTVLKVLEINDY-LLGTLAGGAADCQYWER 156

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +                M+   D+    +      
Sbjct: 157 VLGMECRLWELRNGSRITVAAASKILANITYAYRNHGLSMGTMLAGWDRFGPSLYYVDDK 216

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +  + ++GSG  YA            S   A ++AR+++  A      +   + +
Sbjct: 217 GSRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTV 275


>gi|226306661|ref|YP_002766621.1| 20S proteasome beta-type subunit [Rhodococcus erythropolis PR4]
 gi|75491637|sp|Q53083|PSB2_RHOER RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PrcB 2; Flags: Precursor
 gi|302595780|sp|C0ZZU7|PSB_RHOE4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|847774|gb|AAC45736.1| proteasome beta-type subunit 2 [Rhodococcus erythropolis]
 gi|226185778|dbj|BAH33882.1| 20S proteasome beta-type subunit [Rhodococcus erythropolis PR4]
          Length = 292

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + ++G  +   + +KV      +  AG AG++  A  L+ 
Sbjct: 58  HGTTIVAISYAGGVLLAGDRRATMGNLIASRDVQKVYVTDDYSA-AGIAGTAGIAIELVR 116

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 117 LFAVELEHYEKIEGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGYDLDAVDPSRA 176

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A SA + L S    +++A   A +A+  AAD 
Sbjct: 177 GRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKLYSPGIDEDTALRFAVEALYDAADD 236

Query: 173 CVYTNH 178
              T  
Sbjct: 237 DSATGG 242


>gi|297155620|gb|ADI05332.1| proteasome subunit beta [Streptomyces bingchenggensis BCW-1]
          Length = 281

 Score =  121 bits (304), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT++       V++AGD +V++G  +      KV    + + IA  AG++  A  L++
Sbjct: 52  HGTTVIAATYADGVLVAGDRRVTMGNLIAHREYEKVFPADEHSAIA-IAGTAGLAVELVK 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
            L+ +LE Y      +     K  R+ K +R+  +M +     + L              
Sbjct: 111 LLQLELEHYEKIEGTALSLDGKANRLTKMVRDNLSMAMQGMAVVPLFAGYDVHKGVGRVF 170

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTN 177
                     E G    GSG  +A  + + L        +I     +A+  AAD    T 
Sbjct: 171 SYDVTGNRTEERGFATTGSGSVHARGSLKKLYREGMPERDIVTAVVQALYDAADEDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|237842737|ref|XP_002370666.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
 gi|211968330|gb|EEB03526.1| proteasome subunit beta type 5, putative [Toxoplasma gondii ME49]
 gi|221485637|gb|EEE23918.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
 gi|221502989|gb|EEE28699.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
          Length = 309

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 13/181 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L     G +++A D + S+G  +   +  KV  +    I+   AG +AD      
Sbjct: 95  KGTTTLGFVFKGGIILAVDSRASMGTYISSQSVVKVIEISD-IILGTMAGGAADCSYWER 153

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITLVITGM 124
            +    + +  +        A    +     +     L                 +    
Sbjct: 154 HMWLLCKLFKLRNGEPIPVAAASNMLANIFFHWRGYGLCCGTMIAGWNEKDEKPELYFVD 213

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIV 181
                 +  + + GSG +YA            +   A E+ ++A+  AA     +   + 
Sbjct: 214 DKATRLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVELGKRAIYQAAHRDGGSGGVVR 273

Query: 182 L 182
           +
Sbjct: 274 V 274


>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
           furiosus DSM 3638]
 gi|74552258|sp|Q8U4C9|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
           subunit) [Pyrococcus furiosus DSM 3638]
          Length = 196

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++    VV+A D Q SL   V   N +K+  +     I   AGS  D   L   
Sbjct: 6   GTTTVGIKVKDGVVLAADTQASLDHMVETLNIKKIIPITDRIAITT-AGSVGDVQMLARY 64

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           LE +   Y     R     A    +   L             +        +        
Sbjct: 65  LEAEARYYYFTWGRPMTTKAMANLLSNILNENRWFPYLVQIIIGGYVDEPTIANLDPFGG 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH-NIVLET 184
              +   A GSG  +A++          +   A+E+A +A+  A    VYT    + + T
Sbjct: 125 LIFDDYTATGSGTPFAIAVLEEGYREDLTIEEAKELAIRAVRAAGRRDVYTGSKKVQVVT 184

Query: 185 LKVG 188
           +   
Sbjct: 185 ITKD 188


>gi|153791216|ref|NP_001093250.1| proteasome subunit beta type-11 precursor [Homo sapiens]
 gi|158513330|sp|A5LHX3|PSB11_HUMAN RecName: Full=Proteasome subunit beta type-11; AltName:
           Full=Proteasome subunit beta-5t; Flags: Precursor
 gi|148537365|dbj|BAF63540.1| proteasome subunit beta5t [Homo sapiens]
 gi|307686397|dbj|BAJ21129.1| proteasome (prosome, macropain) subunit, beta type, 11 [synthetic
           construct]
          Length = 300

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    + KV  + +  ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQH-LLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L+++L     +  +     +    +   +     + L         D++   +
Sbjct: 101 CATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPEL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            S   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|297297485|ref|XP_002805028.1| PREDICTED: proteasome subunit beta type-11 isoform 2 [Macaca
           mulatta]
          Length = 332

 Score =  121 bits (303), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    + KV  + +  ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQH-LLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L+++L     +  +     +    +   +     + L         D++  ++
Sbjct: 101 CATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSRYRGLDLCVATALCGWDRSGPML 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            S   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTRLQGNIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|300709258|ref|XP_002996795.1| hypothetical protein NCER_100054 [Nosema ceranae BRL01]
 gi|239606120|gb|EEQ83124.1| hypothetical protein NCER_100054 [Nosema ceranae BRL01]
          Length = 229

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 12/187 (6%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +KH  +    TT L       +VIA D + S G  +   N  KV R+ K  +I   AG +
Sbjct: 24  NKHC-IPYKGTTTLAFIFQEGMVIAVDSRASAGSYIASQNVHKVIRINKY-LIGTMAGGA 81

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTIT 118
           +D +   +++    + Y  +  +     A    +   +   +        M+   D    
Sbjct: 82  SDCYFWEKKMGLYAKSYELKNDKRISVSAASMFLSNCVYQYKGRGLSLGSMVCGYDGDKP 141

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVY 175
           L+     D       + ++GSG + A                A E+ +KA+  A     Y
Sbjct: 142 LIYYVDNDGKRISGSLFSVGSGSTIAYGVLNESYKFDLNKDEALELGKKAIWHATHRDAY 201

Query: 176 TNHNIVL 182
           +  N+ L
Sbjct: 202 SGGNVNL 208


>gi|160419232|sp|A1XQU1|PSB7_PIG RecName: Full=Proteasome subunit beta type-7; Flags: Precursor
 gi|123299966|dbj|BAF45330.1| proteasome beta 7 subunit proprotein [Sus scrofa]
          Length = 277

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 14/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++        +   EE   +  +A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TL 185
            +
Sbjct: 220 VI 221


>gi|148223599|ref|NP_001090945.1| proteasome subunit beta type-7 precursor [Sus scrofa]
 gi|117660969|gb|ABK55647.1| PSMB7 [Sus scrofa]
          Length = 277

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 14/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++        +   EE   +  +A  IAA I   + +  NI L 
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEA--IAAGIFNDLGSGSNIDLC 219

Query: 184 TL 185
            +
Sbjct: 220 VI 221


>gi|219118149|ref|XP_002179855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408908|gb|EEC48841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 283

 Score =  121 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 59/175 (33%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  + +G ++++ D + ++G  +     +KV  +    ++   AG +AD      
Sbjct: 73  KGTTTLAFKFNGGIIVSVDSRSTMGYYIASGTVKKVIEINPF-LLGTMAGGAADCSFWER 131

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   Y  +  R     A    +   +       L         D+T   +     D
Sbjct: 132 NLGMECRLYELRNGRRITVAAASKLLANVMSAYRGYGLSMGTMITGWDETGPQLYYVDND 191

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
               +    ++GSG  YA            S EE   + ++A+  A      +  
Sbjct: 192 GTRLKGKYFSVGSGSMYAYGVLDNHWREDLSVEEAIDLGKRAIYHATHRDAASGG 246


>gi|302595912|sp|Q2J9Q3|PSB_FRASC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
          Length = 274

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 17/188 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + + G  + + +  KV      +   G+AG++     L+ 
Sbjct: 51  HGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDYS-CVGYAGTAGVGAELIR 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y      +    AK  R+   ++    M L     + L      D       
Sbjct: 110 LFQVELEHYEKIEGSTLSLDAKANRLAAMVKGNLPMALQGLAVVPLFAGYDLDTGKGRIF 169

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E    +IGSG  +A  + +    +  S   A  I+ +A+  AAD    T 
Sbjct: 170 SYDIAAAKSEERTYESIGSGSVFAKGSLKKRFRSDLSQDDAVRISVEALYDAADDDSATG 229

Query: 178 HNIVLETL 185
              V+  L
Sbjct: 230 GPDVIRKL 237


>gi|134078851|emb|CAK45910.1| unnamed protein product [Aspergillus niger]
          Length = 379

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 26/210 (12%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN------- 56
            +    +K+ H TT L  R  G +++A D + + G  +     +KV  + + +       
Sbjct: 139 SNPSCPIKLAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVKKVIPVSRLSRGEDKPS 198

Query: 57  ------IIAGFAGSSADAFTLLERLEKKLEQY-PNQLLRSSVELAKDWRMDKYLRNLEAM 109
                 ++   AG +A    L+E+           +  R     A    +       + M
Sbjct: 199 NEPTPGLLGTMAGGAAVCAILVEQFMLCARIMGQIRHKRRITVAAASKILANLTYAYKGM 258

Query: 110 ILIAD--------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---A 158
            L           +    +     D       +  +GSG ++A     A      +   A
Sbjct: 259 GLSMGTMLAGMTPQEGPALYYIDSDGTRLPGNLFCVGSGQTFAYGVLDANYRYDLTEEEA 318

Query: 159 EEIARKAMSIAADICVYTNHNIVLETLKVG 188
            E+ R+++  A     Y+   I L  +K  
Sbjct: 319 LELGRRSILAAMHRDAYSGGFINLYHVKEE 348


>gi|193783753|dbj|BAG53735.1| unnamed protein product [Homo sapiens]
          Length = 300

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    + KV  + +  ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQH-LLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L+++L     +  +     +    +   +     + L         D++   +
Sbjct: 101 CATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPEL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            S   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|325120167|emb|CBZ55721.1| Family T1, proteasome beta subunit, threonine peptidase, related
           [Neospora caninum Liverpool]
          Length = 310

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 13/181 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L     G +++A D + S+G  +   +  KV  +    I+   AG +AD      
Sbjct: 96  KGTTTLGFVFKGGIILAVDSRASMGTYISSQSVVKVIEISD-IILGTMAGGAADCSYWER 154

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITLVITGM 124
            +    + +  +        A    +     +     L            +    +    
Sbjct: 155 HMWLLCKLFKLRNGEPIPVAAASNMLANIFFHWRGYGLCCGTMIAGWNEKEEKPELYFVD 214

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIV 181
                 +  + + GSG +YA            +   A E+ ++A+  AA     +   + 
Sbjct: 215 DKATRLKGDLFSCGSGSTYAYGVLDNEYKWDMTDEEAVELGKRAIYQAAHRDGGSGGVVR 274

Query: 182 L 182
           +
Sbjct: 275 V 275


>gi|271967153|ref|YP_003341349.1| 20S proteasome alpha and subunit betas-like protein
           [Streptosporangium roseum DSM 43021]
 gi|302595788|sp|D2ATV1|PSB_STRRD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|270510328|gb|ACZ88606.1| 20S proteasome alpha and beta subunits-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 282

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 67/181 (37%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+     G VV+AGD + + G  + + +  KV R    +   G AG+++    +  
Sbjct: 53  HATTIVAATCAGGVVMAGDRRATSGNIISQRDMEKVFRTDDYS-CMGIAGTASTGIEMAR 111

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y     R+     K  R+   +R    M +     + L              
Sbjct: 112 LYRVELEHYEKMEGRTLSVAGKANRLATMIRGNLGMAMQGLVVVPLFAAYDPEIDGGRIF 171

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
               G     +    +IGSG  +A  + + L     S EE+      A+  AAD    T 
Sbjct: 172 GYDVGGGPYEQQQYHSIGSGSIFARGSLKKLYRENASPEEVVLTLIHALYDAADDDSATG 231

Query: 178 H 178
            
Sbjct: 232 G 232


>gi|313126409|ref|YP_004036679.1| proteasome endopeptidase complex, beta component [Halogeometricum
           borinquense DSM 11551]
 gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
           borinquense DSM 11551]
          Length = 243

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 9/182 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++ +  VV+A D + SLG  V   N +KV  +     +   AGS + A +L+  
Sbjct: 49  GTTTVGLKTEDGVVLATDMRASLGHMVSSKNVQKVEEIHPTGAL-TIAGSVSAAQSLIRS 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVLE 129
           +  ++  Y ++        A    +  +LR+    I+       D     + +       
Sbjct: 108 IRAEVRLYESRRGEDMSMQALSTLLGNFLRSGAFYIVQPILGGFDDEGAHIYSIDPAGSI 167

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLK 186
            E      GSG  YAL       S   S EE    A +A+  A +  + + + I +  + 
Sbjct: 168 LEEEYTVTGSGSQYALGVLEQEYSNDLSIEEAKTTAARAIKSAVERDLASGNGINVCVVT 227

Query: 187 VG 188
             
Sbjct: 228 ED 229


>gi|195162811|ref|XP_002022247.1| GL24711 [Drosophila persimilis]
 gi|194104208|gb|EDW26251.1| GL24711 [Drosophila persimilis]
          Length = 272

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     VV+  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 42  IVGIIYKDGVVLGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTERTTDIISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +     R    +A +  + + L   +  I  A      DKT   +          +
Sbjct: 101 QLELHRLSTERDVRVVAANTMLKQMLFRYQGHISAALVLGGVDKTGPHIYCIHPHGSSDK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A+S   +      S +E   + R A  IAA I   + +  N+ L  ++
Sbjct: 161 LPYATMGSGSLAAMSVFESRWKPDMSEKEAKLLVRDA--IAAGIFNDLGSGSNVDLCVIR 218

Query: 187 VG 188
             
Sbjct: 219 KD 220


>gi|167998460|ref|XP_001751936.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162697034|gb|EDQ83371.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 236

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D   S+G ++   + +K+  +    ++   AG +AD      
Sbjct: 16  KGTTTLAFVFKHGVIVAADSSASMGNSISSQSVKKILEINPY-LLGTMAGGAADCQFWQR 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   +     R          +   L +   M L         D+T   +     +
Sbjct: 75  NLGTRCRLHELANKRHISVTGASKLLANTLYSYRGMGLFMGTMIAGWDETGPGLYYVDSE 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
               +    ++GSG +YA      +     S   A E+AR+++  A    
Sbjct: 135 GGRVKGTRFSVGSGSTYAYGVLDTVFKQDMSIDEAVELARRSIYHATLRD 184


>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
 gi|302595715|sp|A2BN27|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
          Length = 212

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 10/185 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     VV+A D + + G  V     +K+ ++     +   AG  ADA  L 
Sbjct: 13  LKGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTT-AGLVADAQMLA 71

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMD------KYLRNLEAMILIADKTITLVITGMGD 126
           E L      Y     R     A    +       K+   +  ++L    T   +      
Sbjct: 72  EWLANHTHYYEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGGYDTQPRLYNIDWF 131

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E   +A GSG   A+       S   S   A E+A++A++ +     +T + + + 
Sbjct: 132 GSVTEEKYVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFTGNGVDVV 191

Query: 184 TLKVG 188
            +   
Sbjct: 192 VIGKD 196


>gi|291226132|ref|XP_002733045.1| PREDICTED: proteasome beta 7 subunit-like [Saccoglossus
           kowalevskii]
          Length = 271

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + +    V   N  K+  +       G AG++AD     + 
Sbjct: 38  GTTIVGIVFKDGVVLGADTRATEDTIVADKNCSKIHYIAPNIYCCG-AGTAADTEMTTQM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R++     +  + + L   +  I  A      D T   + +      
Sbjct: 97  ISSQLELHRLSTGRTARVCVANRMLKQMLFRYQGYISAALVLGGVDSTGPHLYSVYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
                 + +GSG   A++              A  + R A  IAA I   + +  N+ + 
Sbjct: 157 TDMLPYVTMGSGSLAAMAVFEDGFKPNMERDAAVTLVRNA--IAAGIFNDLGSGSNVDVC 214

Query: 184 TLKVG 188
            +   
Sbjct: 215 VITKD 219


>gi|332841886|ref|XP_522799.2| PREDICTED: proteasome subunit beta type-11-like [Pan troglodytes]
          Length = 300

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    + KV  + +  ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASCKVIPVHQH-LLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L+++L     +  +     +    +   +     + L         D++   +
Sbjct: 101 CATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSQYRGLDLCVATALCGWDRSGPEL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            S   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|2654060|gb|AAB87680.1| proteasome subunit X [Danio rerio]
          Length = 218

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 11/171 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 49  LHGTTTLAFKFQHGVIVAVDSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 107

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 108 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMVCGWDKRGPGLYYVDS 167

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
           +       + A+GSG  YA     + +    +   A ++ R+ +  A    
Sbjct: 168 EGNRVCGDLFAVGSGSMYAYGVVDSGLRYDLTIDEACDLGRRGIYQATYRD 218


>gi|194038909|ref|XP_001925798.1| PREDICTED: proteasome subunit beta type-11-like [Sus scrofa]
          Length = 291

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 11/187 (5%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
             H     H TT L  R    V+ A D + S G  V    +RKV  + +  ++   +G+S
Sbjct: 40  QTHGPRLAHGTTTLAFRFRDGVIAAADTRSSCGNYVECPASRKVIPVHQH-LLGTTSGTS 98

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD  T    L ++L     +  +          +   +     + L         D++  
Sbjct: 99  ADCTTWYRVLRRELRLRELREGQLPSVAGAAKLLSGMMSRYRGLDLCVATALCGWDRSGP 158

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +     D    +  + ++GSG  YA            S   A  +A +A++ A     Y
Sbjct: 159 ALFYVYSDGTLLQGDIFSVGSGSPYAYGVLDRGYRYDMSTQEAYALACRAVAHATHRDAY 218

Query: 176 TNHNIVL 182
           +  ++ L
Sbjct: 219 SGGSVDL 225


>gi|221126419|ref|XP_002155480.1| PREDICTED: similar to Proteasome subunit beta type-7 [Hydra
           magnipapillata]
          Length = 262

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G TV   N  K+  +       G AG++AD     + 
Sbjct: 28  GTTIVGLVYKDGVVLGADTRATEGNTVADKNCAKIHYIAPNIYCCG-AGTAADTEYTTQI 86

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   +E +  +  +          + +YL   +        +   D T   + T      
Sbjct: 87  ISANIELHRLETQKKPRVATACRMLKQYLHRYQGHVSAALVLGGVDVTGPCLYTIAPHGS 146

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++   A          A+E+ R+A+     I   + +  N+ L 
Sbjct: 147 TDKLPYVTMGSGSLAAMAVFEAGFKPYMELDDAKELVRQAIL--GGIFNDLGSGSNVDLC 204

Query: 184 TLKVG 188
            +   
Sbjct: 205 VITKD 209


>gi|296129845|ref|YP_003637095.1| 20S proteasome A and B subunits [Cellulomonas flavigena DSM 20109]
 gi|296021660|gb|ADG74896.1| 20S proteasome A and B subunits [Cellulomonas flavigena DSM 20109]
          Length = 276

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +  +G VV+AGD + ++G  +   +  KV    + + + G AG++  A  L+ 
Sbjct: 49  HATTIVALAFEGGVVMAGDRRATMGSMIASRHIEKVFPADEFSAV-GIAGTAGLAIELVR 107

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y            K  R+   +R    + L     + L      D       
Sbjct: 108 LFQLELEHYEKIEGSLLSLDGKANRLATMIRGNLGLALQGLAVVPLFAGYDLDRAVGRIF 167

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E+   A+GSG  +A  +             A  +A +A+  AAD    T 
Sbjct: 168 SYDVTGGRYEEHEHHAVGSGSVFARGSLTKRWRPGLDTSTAVRVAVEALVDAADDDSATG 227

Query: 178 H 178
            
Sbjct: 228 G 228


>gi|154345734|ref|XP_001568804.1| proteasome beta 5 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066146|emb|CAM43936.1| putative proteasome beta 5 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 302

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  R DG +++A D + S GQ +      KV  +    ++   AG +AD      
Sbjct: 98  KGTTTLAFRFDGGIIVAVDSRASTGQYIASQTVLKVLEINDY-LLGTLAGGAADCQYWER 156

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +                M+   D+    +      
Sbjct: 157 VLGMECRLWELRNGSRISVAAASKILANITYAYRNHGLSMGTMVAGWDQFGPSLYYVDDK 216

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +  + ++GSG  YA            S   A ++AR+++  A      +   + +
Sbjct: 217 GSRVKQDLFSVGSGSIYAYGVLDTGYRKDLSVEDACDLARRSIFHATYRDGASGGIVTV 275


>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
 gi|74559570|sp|Q8TW10|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
          Length = 210

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 13/188 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +  D  VV+A D +  +G  +     +K+ R+     +   AGS ADA  +++
Sbjct: 9   KGTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTT-AGSVADAQKIVD 67

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD-------KYLRNLEAMILIA--DKTITLVITGM 124
            +  +   Y  +  R     A    +        K  R     +++   +     +    
Sbjct: 68  LMRAEARLYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDDPALYNLD 127

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIV 181
                 E    A GSG   A     A      S   A E+A +A+  A +    T   + 
Sbjct: 128 PSGSIIEEDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTGEGVT 187

Query: 182 LETLKVGD 189
           + T+   +
Sbjct: 188 VVTITREE 195


>gi|7141312|gb|AAF37285.1|AF226674_1 20S proteasome beta 5 subunit [Trypanosoma brucei]
          Length = 250

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    DG ++IA D + S GQ +      KV  + +  ++   AG +AD      
Sbjct: 45  KGTTTLGFHFDGGIIIAVDSRASSGQYISSQTVMKVLEINEY-LLGTMAGGAADCQYWER 103

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +                M+   D+    +      
Sbjct: 104 VLGMECRLWELRNNCRISVAAASKILANITYQYRNHGLSMGTMVAGWDQFGPSLYYVDDK 163

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
               ++ + ++GSG  YA            + EE   +AR+++  A      +   + +
Sbjct: 164 GTRVKHEIFSVGSGSIYAYGVLDQGYRKNLTVEEACDLARRSIFHATYRDGASGGIVTV 222


>gi|254819642|ref|ZP_05224643.1| PrcB [Mycobacterium intracellulare ATCC 13950]
          Length = 292

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 73/187 (39%), Gaps = 23/187 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VV+AGD + + G  +   + +KV          G AG++A A     
Sbjct: 56  HGTTIVALKYPGGVVLAGDRRSTQGNMIAGRDVKKVYITDDYTA-TGIAGTAAIAVEFAR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R   A  +     + L++            
Sbjct: 115 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAAAMQGLVALPLLVGYDIDAPDPEGA 174

Query: 125 ----------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
                     G  LE E G  ++GSG  +A S+ + L S     +SA  +A +A+  AAD
Sbjct: 175 GRIVSFDAAGGWNLEEEEGYQSVGSGSIFAKSSMKKLYSQVTDADSAVRVAIEALYDAAD 234

Query: 172 ICVYTNH 178
               T  
Sbjct: 235 DDSATGG 241


>gi|57090423|ref|XP_547726.1| PREDICTED: similar to proteasome beta 5 subunit [Canis familiaris]
          Length = 282

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    +RK+  + +  ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGNYVACPASRKIIPVHQH-LLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
                  L ++L     +  R          +   +     + L         D++   +
Sbjct: 101 CAAWYRVLRRELRLRALREGRLPSVAGAARLLSAMMSCYRGLDLCVATALCGWDRSGPAL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                D       V ++GSG  YA            S +E   +AR+A++ A     Y+ 
Sbjct: 161 FYVCSDGTRLPGNVFSVGSGSPYAYGVLDRGYRYDLSPQEAYALARRAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|315308142|gb|ADU04474.1| beta-type proteasome 7 subunit [Canis lupus familiaris]
          Length = 277

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA +   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGVFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|195396847|ref|XP_002057040.1| GJ16567 [Drosophila virilis]
 gi|194146807|gb|EDW62526.1| GJ16567 [Drosophila virilis]
          Length = 328

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 11/177 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G +++  D + + G+ +     +K+  + KG I+   AG +AD      
Sbjct: 70  HGTTTLGFKYQGGILLCADSRGTNGEFIASQEMKKIIEVDKG-ILGTIAGGAADCVYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L  +   +     RS    +    M       +        M+   D     +I    D
Sbjct: 129 VLTMECRLFELTYGRSMTVKSAARIMCNIAYKFKGLGLCIGMMLAGYDFDGPQLIYVDSD 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
               E  +  IGSG   AL    +      S EE   +A + +  A  +  YT   +
Sbjct: 189 GQRVEGNLFTIGSGAHCALGILDSFYRWDMSDEEAYNLALRGVYHATYLDAYTGGLV 245


>gi|195149838|ref|XP_002015862.1| GL11283 [Drosophila persimilis]
 gi|194109709|gb|EDW31752.1| GL11283 [Drosophila persimilis]
          Length = 305

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 13/168 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R  G VV+  D + + GQ +     +K+  L    ++   AG +AD      
Sbjct: 70  HGTTTLGFRYQGGVVLCADSRATSGQYIGSQTMKKIVELNDY-MLGTLAGGAADCVYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
            L +    +  +  R         R+      +  M+   D     +I    + +     
Sbjct: 129 VLARDSRLHELRFKR---------RLSGMGLVMGMMLAGYDDEGPKLIYVDSEGMRCHGN 179

Query: 134 VMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNH 178
           V A+GSG  YAL           T   A ++AR+A+  A     Y+  
Sbjct: 180 VFAVGSGSPYALGVLDTGHRFTMTDQEAFDLARRAIYHATSKDAYSGG 227


>gi|71416085|ref|XP_810086.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70874567|gb|EAN88235.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
          Length = 311

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    DG +++A D + S GQ +      K+  + +  ++   AG +AD      
Sbjct: 109 KGTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKILEINEY-LLGTMAGGAADCQYWER 167

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +     +          M+   D+    +      
Sbjct: 168 VLGMECRLWELRNNCRISVAAASKILANITYSYRNYGLSMGTMVAGWDQFGPSLYYVDDK 227

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               ++ + ++GSG  YA            +   A E+AR+++  A      +   + +
Sbjct: 228 GTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTV 286


>gi|145594775|ref|YP_001159072.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
 gi|145304112|gb|ABP54694.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
          Length = 324

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 67/185 (36%), Gaps = 21/185 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +   G VV+AGD + ++G  + + +  KV      + + G AG++     L  
Sbjct: 97  HATTIVAIATAGGVVLAGDRRATMGNLIAQRDVEKVHPADAYS-LVGMAGAAGIGIELTR 155

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y            K  R+   +R      +     + L              
Sbjct: 156 LFQVELEHYEKTEGAMLSLDGKANRLAAMVRGNLGAAMQGLAVVPLFAGFDLAATDPAKA 215

Query: 129 ------------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
                         E G  A+GSG  +A SA +       S   A  +A +A+  AAD  
Sbjct: 216 GRIFSFDVTGGPYEETGYDAVGSGSVFAKSALKKRFRLGLSVDDAVRLAVEALYDAADDD 275

Query: 174 VYTNH 178
             T  
Sbjct: 276 TATGG 280


>gi|71418280|ref|XP_810804.1| proteasome beta 5 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70875393|gb|EAN88953.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
          Length = 311

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    DG +++A D + S GQ +      KV  + +  ++   AG +AD      
Sbjct: 109 KGTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKVLEINEY-LLGTMAGGAADCQYWER 167

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +     +          M+   D+    +      
Sbjct: 168 VLGMECRLWELRNNCRISVAAASKILANITYSYRNYGLSMGTMVAGWDQFGPSLYYVDDK 227

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               ++ + ++GSG  YA            +   A E+AR+++  A      +   + +
Sbjct: 228 GTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTV 286


>gi|108800096|ref|YP_640293.1| proteasome subunit beta [Mycobacterium sp. MCS]
 gi|119869223|ref|YP_939175.1| proteasome subunit beta [Mycobacterium sp. KMS]
 gi|126435720|ref|YP_001071411.1| proteasome subunit beta [Mycobacterium sp. JLS]
 gi|123070021|sp|Q1B797|PSB_MYCSS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|302595769|sp|A3Q193|PSB_MYCSJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|302595770|sp|A1UHS7|PSB_MYCSK RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|108770515|gb|ABG09237.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01B [Mycobacterium sp. MCS]
 gi|119695312|gb|ABL92385.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01B [Mycobacterium sp. KMS]
 gi|126235520|gb|ABN98920.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01B [Mycobacterium sp. JLS]
          Length = 304

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 69/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VV+AGD + + G  +   + +KV          G AG++A A     
Sbjct: 64  HGTTIVALKFPGGVVMAGDRRATQGNMIASRDVQKVYITDDYTA-TGIAGTAAIAVEFAR 122

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y      +     K  R+   +R      L     + L+             
Sbjct: 123 LYAVELEHYEKLEGVALTFAGKVNRLATMVRGNLGAALQGFVALPLLAGFDLDDPDPQAA 182

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L       +SA  +A +A+  AAD 
Sbjct: 183 GRIVSFDAAGGHNLEEEGFQSVGSGSIFAKSSMKKLYHQVTDADSALRVAVEALYDAADD 242

Query: 173 CVYTNH 178
              T  
Sbjct: 243 DSATGG 248


>gi|291301921|ref|YP_003513199.1| 20S proteasome subunits A/B [Stackebrandtia nassauensis DSM 44728]
 gi|302595786|sp|D3Q557|PSB_STANL RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|290571141|gb|ADD44106.1| 20S proteasome A and B subunits [Stackebrandtia nassauensis DSM
           44728]
          Length = 279

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 71/185 (38%), Gaps = 21/185 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +R +  VV+AGD + + G  +   + +KV      + + G AG++     ++ 
Sbjct: 52  HGTTIVALRCNEGVVMAGDRRATQGNMISLRDIQKVFPADAYS-LIGIAGTAGLGVEMIR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
             + +LE +      +     K  ++   +R    + +     + L              
Sbjct: 111 LFQAELEHFEKLEGNALSLHGKANKLANMIRGNLGIAMQGLAVLPLFAGFDTDAPDAASA 170

Query: 126 ---------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
                      +  E    AIGSG  +A SA +    ++  A E   +A +A+  AAD  
Sbjct: 171 GRIFSYDVVGGIYEEREYDAIGSGSIFAKSALKKRFQSEVDATEATRLAIEALYDAADDD 230

Query: 174 VYTNH 178
             T  
Sbjct: 231 SATGG 235


>gi|196000078|ref|XP_002109907.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
 gi|190588031|gb|EDV28073.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
          Length = 229

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     +++  D + S G  +   N  K+  +       G AG++AD   +   
Sbjct: 16  GTTIAGIVFKDGIILGADTRASEGTFIADKNCSKIHYISPNMYCCG-AGTAADTEYVTRL 74

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  K+E +     R    +A    + + L   +        +   D T   + T      
Sbjct: 75  ISSKIELHSLTTERKPRVVAALTMLKQMLFRYQGYVGAYLVLGGVDSTGPHLYTVHARGS 134

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++              A+++ R A  IAA I   + +  N+ L 
Sbjct: 135 SDKLPYVTMGSGSLAAMAVFEDRYHVNMELDEAKQLVRDA--IAAGIFNDLGSGSNVDLC 192

Query: 184 TLKVG 188
            +   
Sbjct: 193 VITKD 197


>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
 gi|306755975|sp|D4GYZ1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
 gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
          Length = 243

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 9/182 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++ +  VV+A D + S+G  V   + +KV  +     +   AGS + A +L+  
Sbjct: 49  GTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGAL-TIAGSVSAAQSLISS 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-----LEAMILIADKTITLVITGMGDVLE 129
           L  ++  Y  +        A    +  +LR+     ++ ++   D+T   + +       
Sbjct: 108 LRAEVRLYEARRGEDMSMQALSTLVGNFLRSGGFYVVQPILGGVDETGPHIYSIDPAGSI 167

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLK 186
            E      GSG  YAL           S EE   +A KA+  A +  + + + I +  + 
Sbjct: 168 LEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGINIAVVT 227

Query: 187 VG 188
             
Sbjct: 228 ED 229


>gi|14590176|ref|NP_142241.1| proteasome beta subunit [Pyrococcus horikoshii OT3]
 gi|74570532|sp|O57983|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
           horikoshii OT3]
          Length = 197

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++    V++A D Q SL   V   N RK+  +     I   AGS  D   +   
Sbjct: 6   GTTTVGIKVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITT-AGSVGDVQMIARI 64

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           LE +   Y     R     A    +   L   +         +        +        
Sbjct: 65  LEAEARYYYFAWGRPMTTKAMANLLSNILNENKWFPYLVQIIIGGYVDEPTIANLDPYGG 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNH-NIVLET 184
              +   A GSG  +A++              A+E+A KA+  A    VYT    + + T
Sbjct: 125 LIFDNYTATGSGTPFAIAILEEGYKENLGIEEAKELAIKAIKAAGSRDVYTGSKKVQVVT 184

Query: 185 LKVG 188
           +   
Sbjct: 185 ITKE 188


>gi|195378434|ref|XP_002047989.1| GJ11606 [Drosophila virilis]
 gi|194155147|gb|EDW70331.1| GJ11606 [Drosophila virilis]
          Length = 270

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 40  IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 98

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +     R    +  +  + + L   +  I  A      DK    + +        +
Sbjct: 99  QLELHRLNTERQVPVVCANNILKQMLFRYQGHISAALVLGGVDKYGPHIYSIHPHGSADK 158

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A++   +      + EE   + R A  IA+ +   + +  NI L  ++
Sbjct: 159 LPYATMGSGSLAAMAVFESRWRPDLTEEEGKLLVRDA--IASGVFNDLGSGSNIDLCVIR 216

Query: 187 VG 188
             
Sbjct: 217 KD 218


>gi|322820494|gb|EFZ27096.1| proteasome beta 5 subunit, putative [Trypanosoma cruzi]
          Length = 311

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    DG +++A D + S GQ +      KV  + +  ++   AG +AD      
Sbjct: 109 KGTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKVLEINEY-LLGTMAGGAADCQYWER 167

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +     +          M+   D+    +      
Sbjct: 168 VLGMECRLWELRNNCRISVAAASKILANITYSYRNYGLSMGTMVAGWDQFGPSLYYVDDK 227

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               ++ + ++GSG  YA            +   A E+AR+++  A      +   + +
Sbjct: 228 GTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTV 286


>gi|222634976|gb|EEE65108.1| hypothetical protein OsJ_20167 [Oryza sativa Japonica Group]
          Length = 277

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    D  V++A D + S+G  +     RK+  +    ++   AG +AD      
Sbjct: 59  KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+    +     +
Sbjct: 118 NLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSE 177

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                    ++GSG  YA                A E+AR+A+  A      +   + +
Sbjct: 178 GARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSV 236


>gi|21465650|pdb|1IRU|I Chain I, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465664|pdb|1IRU|W Chain W, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
          Length = 234

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 14/184 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + +
Sbjct: 1   TTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQLI 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLE 129
              LE +     R    +  +  + + L      I  A      D T   + +       
Sbjct: 60  SSNLELHSLSTGRLPRVVTANRMLKQMLFRYRGYIGAALVLGGVDVTGPHLYSIYPHGST 119

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLET 184
            +   + +GSG   A++            EE   +  +A  IAA I   + +  NI L  
Sbjct: 120 DKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLCV 177

Query: 185 LKVG 188
           +   
Sbjct: 178 ISKN 181


>gi|15920523|ref|NP_376192.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
 gi|74574822|sp|Q975U8|PSB1_SULTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|15621306|dbj|BAB65301.1| 197aa long hypothetical proteasome beta subunit [Sulfolobus
           tokodaii str. 7]
          Length = 197

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 67/181 (37%), Gaps = 8/181 (4%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T L ++ +  +++A + ++S G  V+  +A+KV ++G+  I            T L  +E
Sbjct: 7   TALGIKLNDGIILAAERRLSYGGFVLSRSAKKVFKIGRFGIAGAGIMGDIQTLTRLMNVE 66

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITLVITGMGDVLEPE 131
            K  +  N    S    AK   +  Y                D     +          E
Sbjct: 67  IKYYEMYNNKPISVKAAAKLLSVILYQYKWTPFISELLFGGVDDEGPKLFVLDPIGSLIE 126

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETLKVG 188
           +   A+GSG   A+    +      +    +EI  KA+  A +  V +   I + T+K  
Sbjct: 127 DNYAAVGSGARVAIGVLESEYDPSMNLDKGKEIVLKALKAAIERDVTSGDGIDILTIKRD 186

Query: 189 D 189
           +
Sbjct: 187 N 187


>gi|156086830|ref|XP_001610822.1| proteasome epsilon subunit  [Babesia bovis T2Bo]
 gi|154798075|gb|EDO07254.1| proteasome epsilon subunit , putative [Babesia bovis]
          Length = 268

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 56/180 (31%), Gaps = 12/180 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    +  V++A D + S+G  +   N  KV  +    ++   AG +AD      
Sbjct: 55  KGTTTLGFVFNKGVILAVDSRASMGSIIATQNISKVIEINSY-LLGTMAGGAADCTYWER 113

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMG 125
            + K    +  +             +           L A              +     
Sbjct: 114 HVAKLCRLHELRNQERITVAHASQILANIFFYFRGYGLSAGTMIAGWDKNKGPELFYVSD 173

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                   + ++GSG  +A         +  +   A E+ ++A+  AA    Y+   + L
Sbjct: 174 KGERVSGKLFSVGSGSLFAYGVIDQHYRSDMTLDEAVELGKRAIYQAAHRDAYSGGYVNL 233


>gi|219121376|ref|XP_002185913.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582762|gb|ACI65383.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 174

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 88/157 (56%), Positives = 114/157 (72%), Gaps = 8/157 (5%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRL-------GKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
           + GDG VS G   +K NA K+RR+            I GFAGS+ADAFTLLERLE KL++
Sbjct: 1   MMGDGMVSQGSIQVKPNAVKIRRIPHKGDDKEHQGTIVGFAGSTADAFTLLERLEMKLDE 60

Query: 82  YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG 141
           YP QL RS VELAK WR DKYLR LEA +++AD T++L +TG GDV+E  +G++ +GSG 
Sbjct: 61  YPGQLARSCVELAKGWRTDKYLRRLEASLIVADATVSLELTGNGDVIESHDGILGVGSGS 120

Query: 142 SYALSAARALMS-TQNSAEEIARKAMSIAADICVYTN 177
            +A++AARALM  +   AE +ARKAM+IAAD+C+YTN
Sbjct: 121 PFAIAAARALMDSSDLDAEAVARKAMNIAADMCIYTN 157


>gi|8671510|dbj|BAA96838.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
          Length = 277

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    D  V++A D + S+G  +     RK+  +    ++   AG +AD      
Sbjct: 59  KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+    +     +
Sbjct: 118 NLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSE 177

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                    ++GSG  YA                A E+AR+A+  A      +   + +
Sbjct: 178 GARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSV 236


>gi|148699224|gb|EDL31171.1| mCG118255 [Mus musculus]
          Length = 219

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 11/164 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L         DK    +     
Sbjct: 116 RLLARQCRIYELRKKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDS 175

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
           +         ++GSG  YA        S       A ++AR+A+
Sbjct: 176 EGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAI 219


>gi|194758868|ref|XP_001961680.1| GF14807 [Drosophila ananassae]
 gi|190615377|gb|EDV30901.1| GF14807 [Drosophila ananassae]
          Length = 308

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G +V+  D + + G  +     +KV  +    +++  AG +AD      
Sbjct: 70  HGTTTLGFIYQGGIVLCVDSRATAGAYIGSHGMKKVVPISDY-MLSTIAGGAADCSYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L +++  Y  +        +    +         M L               ++    D
Sbjct: 129 VLTREVRLYELRHKERMPVKSAARFLANIAYQYRGMGLSMSIILAGWSDEGPSLVYVDAD 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            L     + + GSGG  AL         + S   A ++A +++  A+   VYT   +   
Sbjct: 189 GLSVPGKLFSAGSGGECALGLLDTEYRYKMSDEKAFDLAFRSIYHASSRDVYTGGVVSCY 248

Query: 184 TLKVG 188
            L   
Sbjct: 249 HLDKK 253


>gi|126294104|ref|XP_001365387.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 277

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +I+A I   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFKPDMEEEE-AKKLVSEAISAGIFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|315158156|gb|EFU02173.1| ATP-dependent protease HslVU, peptidase subunit [Enterococcus
           faecalis TX0312]
          Length = 170

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 71/146 (48%), Positives = 107/146 (73%), Gaps = 1/146 (0%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + H+TTI  V KDG   +AGDGQV++G   VMK  A+KVRR+    ++ GFAGS ADAFT
Sbjct: 17  QFHSTTICAVEKDGKFAMAGDGQVTMGESVVMKGTAKKVRRIYNDEVVVGFAGSVADAFT 76

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L E+ E KL +Y   L R++VELA++WR  + ++ LEAM+++ +K   L+++G G+V+ P
Sbjct: 77  LEEKFEGKLNEYNGNLTRAAVELAQEWRTQQSMQKLEAMLIVMNKEEMLLVSGTGEVITP 136

Query: 131 ENGVMAIGSGGSYALSAARALMSTQN 156
           ++G++AIGSGG++ALSAARA+ +  +
Sbjct: 137 DDGILAIGSGGNFALSAARAMKNFGD 162


>gi|197129150|gb|ACH45648.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
          Length = 279

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 12/181 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V +A D + + G  +   + RKV  +  G ++   AG +AD     
Sbjct: 74  LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPID-GRMLGTMAGGAADCAFWQ 132

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMG 125
             + ++      +        A    +   +   +        M+   DK    +     
Sbjct: 133 RLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM----STQNSAEEIARKAMSIAADICVYTNHNIV 181
           +         A+GSG SYA       +     ++ +A E+AR+A++ AA    Y+   + 
Sbjct: 193 EGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGGCVR 252

Query: 182 L 182
           +
Sbjct: 253 V 253


>gi|115466486|ref|NP_001056842.1| Os06g0153800 [Oryza sativa Japonica Group]
 gi|55297435|dbj|BAD69286.1| beta 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|113594882|dbj|BAF18756.1| Os06g0153800 [Oryza sativa Japonica Group]
 gi|215737492|dbj|BAG96622.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737619|dbj|BAG96749.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 277

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    D  V++A D + S+G  +     RK+  +    ++   AG +AD      
Sbjct: 59  KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+    +     +
Sbjct: 118 NLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSE 177

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                    ++GSG  YA                A E+AR+A+  A      +   + +
Sbjct: 178 GARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSV 236


>gi|75491633|sp|Q53079|PSB1_RHOER RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PrcB 1; Flags: Precursor
 gi|847769|gb|AAC45740.1| proteasome beta-type subunit 1 [Rhodococcus erythropolis]
          Length = 294

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + + G  +   +  KV    + +  AG AG++  A  L+ 
Sbjct: 64  HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSA-AGIAGTAGIAIELVR 122

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 123 LFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRA 182

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A SA + + S      +A   A +++  AAD 
Sbjct: 183 GRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADD 242

Query: 173 CVYTNH 178
              T  
Sbjct: 243 DSATGG 248


>gi|218197607|gb|EEC80034.1| hypothetical protein OsI_21721 [Oryza sativa Indica Group]
          Length = 277

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    D  V++A D + S+G  +     RK+  +    ++   AG +AD      
Sbjct: 59  KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+    +     +
Sbjct: 118 NLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSE 177

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                    ++GSG  YA                A E+AR+A+  A      +   + +
Sbjct: 178 GARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSV 236


>gi|224001200|ref|XP_002290272.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
           CCMP1335]
 gi|220973694|gb|EED92024.1| proteasome subunit beta type 5 precursor [Thalassiosira pseudonana
           CCMP1335]
          Length = 276

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 60/175 (34%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  + +G ++++ D + ++G  +     +KV  +    ++   AG +AD      
Sbjct: 65  KGTTTLAFKFNGGIIVSVDSRSTMGAYIASGTVKKVIEINPF-LLGTMAGGAADCSFWER 123

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L  +   Y  +  +     +    +   + +     L         D+T   +     D
Sbjct: 124 NLGMQCRLYELRNKKRITVASASKLLANTMSSYRGYGLSMGTMITGWDETGPQLYYVDDD 183

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
                    ++GSG +YA            + EE   + ++A+  A      +  
Sbjct: 184 GTRLHGRYFSVGSGSTYAYGVLDTYYRPDLTVEEAIDLGKRAIYHACHRDAMSGS 238


>gi|229582084|ref|YP_002840483.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
 gi|302595759|sp|C3NHF1|PSB2_SULIN RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|228012800|gb|ACP48561.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
          Length = 211

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 12/196 (6%)

Query: 1   MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           MV+MG+K       +  TT + ++ +  VV+A D + S G  V     RKV  +     I
Sbjct: 1   MVIMGNKLQLENKILKGTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGI 60

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD------KYLRNLEAMILI 112
              AGS AD   + + L+                     R+       KY   +  +++ 
Sbjct: 61  TT-AGSVADLQFIYDVLKNIYHYNNITKYGPISIKGIATRLANVLSATKYFPYIVQILIG 119

Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
                  +          E   +A GSG   A+       + + +   A ++A++A+  A
Sbjct: 120 GYDDQPRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSA 179

Query: 170 ADICVYTNHNIVLETL 185
                +T   +++  +
Sbjct: 180 IKRDSFTGTGVIVAKI 195


>gi|125978307|ref|XP_001353186.1| GA17382 [Drosophila pseudoobscura pseudoobscura]
 gi|54641939|gb|EAL30688.1| GA17382 [Drosophila pseudoobscura pseudoobscura]
          Length = 272

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     VV+  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 42  IVGIIYKDGVVLGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTERTTDIISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +     R    +A +  + + L   +  I  A      DKT   +          +
Sbjct: 101 QLELHRLSTERDVRVVAANTMLKQMLFRYQGHISAALVLGGVDKTGPHIYCIHPHGSSDK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A+S   +      S   A+ + R A  IAA I   + +  N+ L  ++
Sbjct: 161 LPYATMGSGSLAAMSVFESRWKPDMSENEAKLLVRDA--IAAGIFNDLGSGSNVDLCVIR 218

Query: 187 VG 188
             
Sbjct: 219 KD 220


>gi|226359996|ref|YP_002777774.1| 20S proteasome beta-type subunit [Rhodococcus opacus B4]
 gi|302595781|sp|C1ASP7|PSB_RHOOB RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|226238481|dbj|BAH48829.1| 20S proteasome beta-type subunit [Rhodococcus opacus B4]
          Length = 294

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + + G  +   +  KV    + +  AG AG++  A  L+ 
Sbjct: 64  HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSA-AGIAGTAGIAIELVR 122

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 123 LFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADEEARA 182

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A SA + + S      +A   A +++  AAD 
Sbjct: 183 GRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADD 242

Query: 173 CVYTNH 178
              T  
Sbjct: 243 DSATGG 248


>gi|269956287|ref|YP_003326076.1| 20S proteasome subunits A and B [Xylanimonas cellulosilytica DSM
           15894]
 gi|302595791|sp|D1BS26|PSB_XYLCX RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|269304968|gb|ACZ30518.1| 20S proteasome A and B subunits [Xylanimonas cellulosilytica DSM
           15894]
          Length = 270

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 60/174 (34%), Gaps = 14/174 (8%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           +  +  HATTI+ +     VV+AGD + + G  +      KV      ++I G +GS+  
Sbjct: 40  NAPLAPHATTIVALTFQDGVVMAGDRRATAGTMIASREIEKVFPADDYSVI-GISGSAGI 98

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
              L    + +LE Y            K  R+   LR    + +     + L      D 
Sbjct: 99  GVDLARLFQLELEHYEKIEGSLLSLDGKANRLGTLLRGNLPLAMQGFVVVPLFGGYDLDR 158

Query: 128 L-------------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                           E+     GSG  +A  A + L      A E  + A+  
Sbjct: 159 GAGRIFSYDATGGRYEEHEHHGTGSGAIFARGALKKLWRPGMDAAEAVKVAVEA 212


>gi|114626636|ref|XP_001140922.1| PREDICTED: proteasome beta 7 subunit isoform 2 [Pan troglodytes]
          Length = 278

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 15/186 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAI-GSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVL 182
             +   + + GSG   A++            EE   +  +A  IAA I   + +  NI L
Sbjct: 162 TDKLPYVTMGGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDL 219

Query: 183 ETLKVG 188
             +   
Sbjct: 220 CVISKN 225


>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
 gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
          Length = 209

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 63/184 (34%), Gaps = 10/184 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TT + +     VV+A D + S G  V     RK+  +     I   AGS AD   L 
Sbjct: 9   WKGTTTVGILAKDGVVLAADRRASEGFFVANKMVRKILYITDNIGITT-AGSVADLQFLY 67

Query: 73  ERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
             L+           R       +  LA     +KY   L  +++    T   +      
Sbjct: 68  YVLKNLYHYNYISGNRPTTVKALATYLANTLSQNKYFPYLVQILIGGYDTQPRLYNLDYF 127

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLE 183
               E   +A GSG   A+           +A+   +IA +A+  A     YT   +++ 
Sbjct: 128 GDMTEEKYVATGSGSPVAMGVLEDEYREDLTADQAMDIAARAVLSAIKRDSYTGTGVIVS 187

Query: 184 TLKV 187
            +  
Sbjct: 188 KITK 191


>gi|47210559|emb|CAF96424.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 224

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 13/191 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
           + +  H TT L     G V+ A D + S    V    ++K+  +    +    +G+SAD 
Sbjct: 27  FPMS-HGTTTLAFIFQGGVLAAADTRSSCSGLVACPASQKIVPIHSHLV-GTTSGTSADC 84

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
                 L ++L  Y  +  R          +   L   +   L            +   +
Sbjct: 85  VLWKRILARELRLYQLRHGRRLSTRGAAKLLSHMLHPFKGTDLCVAATLCGWDGFSGPSL 144

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                D       + ++GSG  YA S     +    S EE   +AR+A+  A     Y+ 
Sbjct: 145 HYVCSDGTRLPGTLFSVGSGSPYAYSILDQGVEWNLSVEEATSVAREAVFRATHRDAYSG 204

Query: 178 HNIVLETLKVG 188
           +N+ +  +   
Sbjct: 205 NNVDIYLISSK 215


>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
 gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
          Length = 247

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 20/198 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T+L +  +  VV+AGD ++S G +++  +  K+  L    ++ G  GS  D 
Sbjct: 38  EPYDFNGGTVLAIAGEDFVVVAGDTRLSTGYSILSRDESKLHELTPTTVL-GCPGSHNDI 96

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
             L   L  + + Y +    S    A    +   L +       A   +  +        
Sbjct: 97  IQLRGVLSIRAQMYQHDNETSMTSSAMSQLLMNTLYSRRFFPYYAFCILCGIDENGKGVV 156

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----------NSAEEIARKAMSIA 169
            T             A GSGG   +     L+                 ++I + A   A
Sbjct: 157 YTYDAIGSYDRVTRAAQGSGGHLMIPLLDNLVEHDTRTDPKKALTLQETKDIIKDAFITA 216

Query: 170 ADICVYTNHNIVLETLKV 187
            +  +YT  ++ + T+K 
Sbjct: 217 GERDIYTGDSVEILTIKA 234


>gi|51340809|gb|AAC97957.2| proteasome beta 5 subunit [Trypanosoma cruzi]
          Length = 261

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    DG +++A D + S GQ +      KV  + +  ++   AG +AD      
Sbjct: 59  KGTTTLGFHFDGGIILAVDSRASSGQYISSQTVMKVLEINEY-LLGTMAGGAADCQYWER 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGMGD 126
            L  +   +  +        A    +     +          M+   D+    +      
Sbjct: 118 VLGMECRLWELRNNCRISVAAASKILANITYSYRNYGLSMGTMVAGWDQFGPSLYYVDDK 177

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               ++ + ++GSG  YA            +   A E+AR+++  A      +   + +
Sbjct: 178 GTRVKHELFSVGSGSIYAYGVLDQGYRKNLTVEEACELARRSIFHATYRDGASGGIVTV 236


>gi|24664391|ref|NP_524076.2| proteasome beta2 subunit [Drosophila melanogaster]
 gi|7294336|gb|AAF49685.1| proteasome beta2 subunit [Drosophila melanogaster]
 gi|15292263|gb|AAK93400.1| LD44234p [Drosophila melanogaster]
 gi|220947342|gb|ACL86214.1| Prosbeta2-PA [synthetic construct]
 gi|220956886|gb|ACL90986.1| Prosbeta2-PA [synthetic construct]
          Length = 272

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 42  IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +  Q  R    +A +  + + L   +  I  A      DKT   + +        +
Sbjct: 101 QLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A++   +      S EE   + R A  IA+ +   + +  NI L  ++
Sbjct: 161 LPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDA--IASGVFNDLGSGSNIDLCVIR 218

Query: 187 VG 188
            G
Sbjct: 219 KG 220


>gi|47216876|emb|CAG11683.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 270

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  + +  V++A D + S G  +    A+KV  +    ++   +GS+AD      
Sbjct: 67  HGTTTLAFKFNQGVIVAVDSRASAGSYIASPVAKKVIEINPY-LLGTMSGSAADCMYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L K+   Y  +  R     A    +   +     M L         DK    +     +
Sbjct: 126 LLAKECRLYRLRNNRRISVAAASKLLANMMLGYRGMGLSVGSMICGWDKQGPGLYYVDEN 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                  + + GSG SYA +     +    S   A E+ R+ ++ A     Y+   + +
Sbjct: 186 GNRFPGQMFSTGSGNSYAYAVVDNGLRADMSVEEAYELGRRGIAYATHRDAYSGGVVNM 244


>gi|194871052|ref|XP_001972776.1| GG15711 [Drosophila erecta]
 gi|190654559|gb|EDV51802.1| GG15711 [Drosophila erecta]
          Length = 272

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 42  IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +  Q  R    +A +  + + L   +  I  A      DKT   + +        +
Sbjct: 101 QLELHRLQTEREVRVVAANVMLKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A++   +      S EE   + R A  IA+ +   + +  N+ L  ++
Sbjct: 161 LPYATMGSGSLAAMTVFESRWRPDLSEEEGKKLVRDA--IASGVFNDLGSGSNVDLCVIR 218

Query: 187 VG 188
            G
Sbjct: 219 KG 220


>gi|154419010|ref|XP_001582522.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121916758|gb|EAY21536.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 256

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+   +G +V+A D + + GQ +      K+  L    +I   AG +AD    L 
Sbjct: 52  HGTTTLSFIYNGGIVVAVDSRATGGQFIFSQTVMKILPLAPN-MIGTMAGGAADCQYWLR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L + ++ +  +  +     A    +   L   +        MI   D T   +      
Sbjct: 111 NLSRLIQLHKFRYQQPLTVAAASKILVNELYRYKGYNLSIGSMICGYDNTGPHIFYIDNH 170

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                    ++GSG ++A            +   A E+ R+A+  A      +   + + 
Sbjct: 171 GSRIAGKRFSVGSGSTHAYGVLDTCYREDMTKEEACELGRRAIYHATYRDSGSGGRVSVV 230

Query: 184 TLKVG 188
            +   
Sbjct: 231 HITQN 235


>gi|290992073|ref|XP_002678659.1| predicted protein [Naegleria gruberi]
 gi|284092272|gb|EFC45915.1| predicted protein [Naegleria gruberi]
          Length = 271

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G  V   N  K+  +       G AG++AD       
Sbjct: 34  GTTICGVVYKDGVVLGADTRATEGPIVADKNCEKIHYIAPNIYCCG-AGTAADTENSTAL 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  KL+ +     + S          + L   +        +   D     + T      
Sbjct: 93  ISSKLQLHRYATGKQSRVDTSMTMFKRMLWKYQGHVSAALVLGGVDVNGPSLYTIYPHGS 152

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             +   + +GSG   A+S   A      S EE   I  KA+S      + +  N+ L  +
Sbjct: 153 TDKLPFVTMGSGSLAAMSVFEAEYKDDMSEEEAKAIVHKAISAGIYNDLGSGSNVDLCVI 212

Query: 186 KVG 188
              
Sbjct: 213 NKE 215


>gi|215701183|dbj|BAG92607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 224

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    D  V++A D + S+G  +     RK+  +    ++   AG +AD      
Sbjct: 6   KGTTTLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPY-MLGTMAGGAADCQFWHR 64

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+    +     +
Sbjct: 65  NLGIKCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSE 124

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                    ++GSG  YA                A E+AR+A+  A      +   + +
Sbjct: 125 GARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSV 183


>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
 gi|121689658|sp|Q18GX3|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
 gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
          Length = 243

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 9/182 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++     V+A D + SLG+ V   + +KV  +     +   AGS + A +L+  
Sbjct: 49  GTTTVGLKTQDGTVLATDMRASLGRMVSSKDVQKVEEIHPTGAL-TIAGSVSAAQSLISS 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVLE 129
           +  ++  Y  +        A    +  +LR+    I+       D     + +       
Sbjct: 108 IRAEVRLYEARRGEDMSMEALSTLLGNFLRSGGFFIVQPILGGVDDDGPHIYSIDPAGSI 167

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLK 186
            E      GSG  YAL       +   S   A+ +A +++  A +  + + + I +  + 
Sbjct: 168 IEEEYTVTGSGSQYALGVLEQQYNEDLSIEEAKTVAARSIESAVERDLASGNGINVCVVT 227

Query: 187 VG 188
             
Sbjct: 228 ED 229


>gi|67523257|ref|XP_659689.1| hypothetical protein AN2085.2 [Aspergillus nidulans FGSC A4]
 gi|40745761|gb|EAA64917.1| hypothetical protein AN2085.2 [Aspergillus nidulans FGSC A4]
 gi|259487455|tpe|CBF86148.1| TPA: proteasome component Pup1, putative (AFU_orthologue;
           AFUA_2G04910) [Aspergillus nidulans FGSC A4]
          Length = 272

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNIELHSLSTGRPPRVITCMTMLKQHLFRYQGYIGAYLVVAGVDPTGIGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   +      + EE IA  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESTWKPNLNKEEAIALASEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 EKD 210


>gi|209875265|ref|XP_002139075.1| proteasome subunit beta type 5 precursor [Cryptosporidium muris
           RN66]
 gi|209554681|gb|EEA04726.1| proteasome subunit beta type 5 precursor, putative [Cryptosporidium
           muris RN66]
          Length = 279

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L     G V++A D + + G  +   + +K+  +    ++   AG +AD      
Sbjct: 67  KGTTTLGFIYQGGVILAVDSRATQGGYIASGSVKKIIEINNY-LLGTMAGGAADCSYWER 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K    +  +  +          +     +     L A       DK    +      
Sbjct: 126 VLAKLCRLHELRNKQRISVAGASNLIANIFFHYRNYGLSAGIMISGYDKNGPQLYYVDNS 185

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
               +    +IGSG  YA+    ++         A E+ R+A++ A      +   + + 
Sbjct: 186 GARVKGNRFSIGSGSVYAIGVLDSVHHFDLTDEDAIELGRRAITHATYRDGGSGGLVRVY 245

Query: 184 TLKVG 188
            +   
Sbjct: 246 QITSQ 250


>gi|307095116|gb|ADN29864.1| proteasome beta 2 subunit [Triatoma matogrossensis]
          Length = 277

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + +    V   N  K+  L K     G AG++AD       
Sbjct: 39  GTTIVGIIFKDGVILGADTRATEDTIVADKNCSKIHYLAKNMYCCG-AGTAADTEMTTLT 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R       +  + + L   +  I  A      D     + T      
Sbjct: 98  IASQLELHRLNTGRVVPVRTANRMLKQLLFRYQGYIGAALVLGGIDNDGPHLYTIHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  ++GSG   A+S   +        EE   + R A+   A I   + +  +  + 
Sbjct: 158 TDNPPYTSMGSGSLAAMSVLESQWHPDMEEEEAKQLVRNAII--AGIFNDLGSGSSCDIC 215

Query: 184 TLKVG 188
            +K  
Sbjct: 216 IIKKN 220


>gi|218674879|ref|ZP_03524548.1| ATP-dependent protease peptidase subunit [Rhizobium etli GR56]
          Length = 125

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 101/124 (81%), Positives = 114/124 (91%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+TVRK G VV+AGDGQVSLGQTVMK NARKVRR+GKG +IAGFAG++ADAFTLLERL
Sbjct: 2   TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLERL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           EKKLEQYP QL+R++VELAKDWR DKYLRNLEAM+L+ADK+ITL ITG GDVLEPE+G  
Sbjct: 62  EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSITLAITGNGDVLEPEHGTT 121

Query: 136 AIGS 139
           AIGS
Sbjct: 122 AIGS 125


>gi|195590348|ref|XP_002084908.1| GD14518 [Drosophila simulans]
 gi|194196917|gb|EDX10493.1| GD14518 [Drosophila simulans]
          Length = 272

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 42  IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +  Q  R    +A +  + + L   +  I  A      DKT   + +        +
Sbjct: 101 QLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A++   +      S EE   + R A  IA+ +   + +  NI L  ++
Sbjct: 161 LPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDA--IASGVFNDLGSGSNIDLCVIR 218

Query: 187 VG 188
            G
Sbjct: 219 KG 220


>gi|195327662|ref|XP_002030537.1| GM25498 [Drosophila sechellia]
 gi|194119480|gb|EDW41523.1| GM25498 [Drosophila sechellia]
          Length = 272

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 42  IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +  Q  R    +A +  + + L   +  I  A      DKT   + +        +
Sbjct: 101 QLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A++   +      S EE   + R A  IA+ +   + +  NI L  ++
Sbjct: 161 LPYATMGSGSLAAMTVFESRWRPDLSEEEGKKLVRDA--IASGVFNDLGSGSNIDLCVIR 218

Query: 187 VG 188
            G
Sbjct: 219 KG 220


>gi|300711728|ref|YP_003737542.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
 gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
          Length = 247

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 67/182 (36%), Gaps = 9/182 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +R +  VV+A D + SLG  V     +KV  +     +   AGS + A +L+  
Sbjct: 47  GTTTVGLRAEDGVVLATDMRASLGNMVSSKTVQKVEDVHPTGAL-TIAGSVSAAQSLIRT 105

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVLE 129
           L  ++  Y  +        A        LR+    I++      D     + +       
Sbjct: 106 LRAEVNLYDARQGEDMSMTALSTLTSNLLRSGGFFIVVPVLGGVDDEGPHIYSMDALGGT 165

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLK 186
            E      GSG  +AL           S   A ++A +++  A +    + + I + T+ 
Sbjct: 166 TEETYAVSGSGSQFALGVLEQHYEEGLSVEEARDVAIRSVGSAVERDTASGNGINIATVT 225

Query: 187 VG 188
             
Sbjct: 226 EE 227


>gi|70606695|ref|YP_255565.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
           639]
 gi|121725055|sp|Q4JAA8|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
           639]
          Length = 203

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 63/185 (34%), Gaps = 10/185 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + ++    VV+A D + S G  V     RKV  +     I   AGS AD   + 
Sbjct: 8   LKGTTTVGIKVKDGVVLAADRRASAGYYVAHKYVRKVLYVTDNIGITT-AGSVADLQFIY 66

Query: 73  ERLEKKLEQYPNQLLRSSVE------LAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           E L+    +                 LA      KY   L  +++        +      
Sbjct: 67  EALKYIYHRNSITGEGPITVKGIATWLANVLSSSKYFPYLVQILIGGVDDQPRLYNLDYL 126

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E    A GSG   AL         + S   A E+A++A+  +     +T   +++ 
Sbjct: 127 GDITEEEYTATGSGSPEALGVLEDNYKPEMSLDEAAELAKRAIFSSIKRDSFTGTGVIVT 186

Query: 184 TLKVG 188
            +   
Sbjct: 187 KITKN 191


>gi|296214538|ref|XP_002753675.1| PREDICTED: proteasome subunit beta type-11-like [Callithrix
           jacchus]
          Length = 300

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    + KV  + +  ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACLASCKVIPVHQH-LLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L+++L     +  +     +    +   +     + L         D++   +
Sbjct: 101 CATWYRVLQRELRLRELREGQLPSVASAAKLLSAMMSRYRGLDLCVATALCGWDRSGPTL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            +   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYHYDMTNQEAYALARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|41407933|ref|NP_960769.1| PrcB [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|254775073|ref|ZP_05216589.1| PrcB [Mycobacterium avium subsp. avium ATCC 25291]
 gi|81571311|sp|Q73YW8|PSB_MYCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|41396287|gb|AAS04152.1| PrcB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 303

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VV+AGD + + G  +   + +KV          G AG++A A     
Sbjct: 66  HGTTIVALKYPGGVVLAGDRRSTQGNMIAGRDVKKVYITDDYTA-TGIAGTAAIAVEFAR 124

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R   A  +     + L+             
Sbjct: 125 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAAAMQGLVALPLLAGYDIDAPDPEGA 184

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L S     +SA  +A +A+  AAD 
Sbjct: 185 GRIVSFDAAGGWNLEEEGYQSVGSGSIFAKSSMKKLYSQVVDADSAVRVAIEALYDAADD 244

Query: 173 CVYTNH 178
              T  
Sbjct: 245 DSATGG 250


>gi|40889405|pdb|1Q5R|H Chain H, The Rhodococcus 20s Proteasome With Unprocessed
           Pro-Peptides
 gi|40889406|pdb|1Q5R|I Chain I, The Rhodococcus 20s Proteasome With Unprocessed
           Pro-Peptides
 gi|40889407|pdb|1Q5R|J Chain J, The Rhodococcus 20s Proteasome With Unprocessed
           Pro-Peptides
 gi|40889408|pdb|1Q5R|K Chain K, The Rhodococcus 20s Proteasome With Unprocessed
           Pro-Peptides
 gi|40889409|pdb|1Q5R|L Chain L, The Rhodococcus 20s Proteasome With Unprocessed
           Pro-Peptides
 gi|40889410|pdb|1Q5R|M Chain M, The Rhodococcus 20s Proteasome With Unprocessed
           Pro-Peptides
 gi|40889411|pdb|1Q5R|N Chain N, The Rhodococcus 20s Proteasome With Unprocessed
           Pro-Peptides
          Length = 294

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + + G  +   +   V    + +  AG AG++  A  L+ 
Sbjct: 64  HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEAVYVTDEYSA-AGIAGTAGIAIELVR 122

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 123 LFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRA 182

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A SA + + S      +A   A +++  AAD 
Sbjct: 183 GRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADD 242

Query: 173 CVYTNH 178
              T  
Sbjct: 243 DSATGG 248


>gi|303390486|ref|XP_003073474.1| proteasome subunit beta type-5 [Encephalitozoon intestinalis ATCC
           50506]
 gi|303302620|gb|ADM12114.1| proteasome subunit beta type-5 [Encephalitozoon intestinalis ATCC
           50506]
          Length = 229

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 65/186 (34%), Gaps = 11/186 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           K +    + TT L       +VIA D + + G  +     +KV  +   N++   AG +A
Sbjct: 23  KSFIKPYYGTTTLAFVFKEGMVIAVDSRATSGPYIASQTVKKVIEI-NKNLLGTMAGGAA 81

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITL 119
           D F   + +    + Y     R     A    +   +   +   L         D +   
Sbjct: 82  DCFYWEKLVGLYAKNYELTNGRRITVSAASMYLSNCVYKYKGYGLSMGTMLCGYDGSEPC 141

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
           +          +  + ++GSG + A     +      S EE   + ++A+  AA    ++
Sbjct: 142 IFYVDDAGKRIKGNLFSVGSGSTIAYGILSSCYRFDMSKEEALNLGKEAIFHAAHRDAFS 201

Query: 177 NHNIVL 182
              I L
Sbjct: 202 GGFINL 207


>gi|325119343|emb|CBZ54896.1| PsmB (EC 3.4.25.1), related [Neospora caninum Liverpool]
          Length = 286

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
             +   TTI  V  +G VV+  D + + G  V   N  K+ R+      AG AG++AD  
Sbjct: 47  PARKTGTTICGVVCNGAVVLGADTRATEGTIVADKNCSKLHRIADNMYAAG-AGTAADLD 105

Query: 70  TLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
            + + L  ++E +            +   L+++    +  +    ++   D     +   
Sbjct: 106 HMCDWLAVQVELHRLNTNAQPRVSMAVSVLSQELFKYQGYKGCAVVLGGVDFKGPHIYKI 165

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
                   +   A+GSG   A++   A      + EE   +   A+       + +  NI
Sbjct: 166 HPHGSTDCSNFAAMGSGSLNAMAILEAGYKDGMTLEEGKALVCDAIKAGVLNDLGSGGNI 225

Query: 181 VLETLKVG 188
            L  +   
Sbjct: 226 DLCIITRE 233


>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
           2661]
 gi|2499838|sp|Q58634|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 224

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 69/188 (36%), Gaps = 13/188 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  TT + +  D  V++A D + SLG  V    A+K+ ++    I    AGS  DA  ++
Sbjct: 4   MKGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDY-IAMTIAGSVGDAQAIV 62

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGM 124
             L  + + Y  +  R+   LA    +   L +      +    I          + +  
Sbjct: 63  RLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLD 122

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
               +  E    A GSG   A     A      S EE   +A  A+  A +   ++ + I
Sbjct: 123 PLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGI 182

Query: 181 VLETLKVG 188
            L  +   
Sbjct: 183 SLAVITKD 190


>gi|227827648|ref|YP_002829428.1| proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
 gi|227830344|ref|YP_002832124.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
           islandicus L.S.2.15]
 gi|229579161|ref|YP_002837559.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
 gi|229584852|ref|YP_002843354.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
 gi|238619816|ref|YP_002914642.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
 gi|284997769|ref|YP_003419536.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
 gi|302595712|sp|D2PK63|PSB1_SULID RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595725|sp|C4KHB0|PSB1_SULIK RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595727|sp|C3MQ16|PSB1_SULIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595742|sp|C3MVD5|PSB1_SULIM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595747|sp|C3N5N4|PSB1_SULIA RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595752|sp|C3NE98|PSB1_SULIY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|227456792|gb|ACP35479.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
           islandicus L.S.2.15]
 gi|227459444|gb|ACP38130.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
 gi|228009875|gb|ACP45637.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
 gi|228019902|gb|ACP55309.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
 gi|238380886|gb|ACR41974.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
 gi|284445664|gb|ADB87166.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
          Length = 211

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 12/196 (6%)

Query: 1   MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           MV+MG++       +  TT + ++ +  VV+A D + S G  V     RKV  +     I
Sbjct: 1   MVIMGNELQLENKILKGTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGI 60

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD------KYLRNLEAMILI 112
              AGS AD   + + L+                     R+       KY   +  +++ 
Sbjct: 61  TT-AGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIG 119

Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
                  +          E   +A GSG   A+       + + +   A ++A++A+  A
Sbjct: 120 GYDDQPRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSA 179

Query: 170 ADICVYTNHNIVLETL 185
                +T   +++  +
Sbjct: 180 IKRDSFTGTGVIVAKI 195


>gi|197129152|gb|ACH45650.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
          Length = 278

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 12/181 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V +A D + + G  +   + RKV  +G G ++   AG +AD     
Sbjct: 74  LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIG-GRMLGTMAGGAADCAFWQ 132

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMG 125
             + ++      +        A    +   +   +        M+   DK    +     
Sbjct: 133 RLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM----STQNSAEEIARKAMSIAADICVYTNHNIV 181
           +         A+GSG SYA       +     ++ +A E+AR+A++ AA    Y+   + 
Sbjct: 193 EGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGGCVR 252

Query: 182 L 182
           +
Sbjct: 253 V 253


>gi|260803067|ref|XP_002596413.1| hypothetical protein BRAFLDRAFT_114302 [Branchiostoma floridae]
 gi|229281668|gb|EEN52425.1| hypothetical protein BRAFLDRAFT_114302 [Branchiostoma floridae]
          Length = 276

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG++AD     + 
Sbjct: 41  GTTIAGIIFKDGVILGADTRATEDTIVADKNCSKIHFIAPNIYCCG-AGTAADTEMTTQM 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   LE +     R +     +  + ++L   +        +   D T   + T      
Sbjct: 100 ISSNLELHRLSTGREARVCTANRMLKQFLFRYQGYISAALVLGGVDYTGPHLYTVHPHGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   +++GSG   A++              A+++ R A  IAA I   + +  N+ L 
Sbjct: 160 TDKLPYVSMGSGSLAAMATFEDRFKPNMELEEAKKLVRDA--IAAGIFNDLGSGSNVDLC 217

Query: 184 TLKVG 188
            +  G
Sbjct: 218 VITKG 222


>gi|156543654|ref|XP_001607442.1| PREDICTED: similar to proteasome subunit beta 7 [Nasonia
           vitripennis]
          Length = 277

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 10/186 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI+ +     V++  D + + G  V    + K+  L K     G AG++AD    
Sbjct: 36  QKTGTTIVGIIYKDGVILGADTRATEGSIVADKKSEKIHYLAKNMYCCG-AGTAADTEMT 94

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMG 125
            E +  +LE +     R    +     + + L   +  I  A      D +   +     
Sbjct: 95  TEMISSQLELHRLNTGRIVPVVTASKLLKQLLFRHQGHIGAALIVGGVDNSGPHLYCIYP 154

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVL 182
                      +GSG   A+S   +      S E   E+   A+       + + +++ +
Sbjct: 155 HGSCDTLQYTTMGSGSLAAMSVFESRWKPGMSEEEGKELVADAIRAGVFNDLGSGNSVDV 214

Query: 183 ETLKVG 188
             ++ G
Sbjct: 215 CVIRKG 220


>gi|197129151|gb|ACH45649.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
          Length = 278

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 12/181 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V +A D + + G  +   + RKV  +G G ++   AG +AD     
Sbjct: 74  LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIG-GRMLGTMAGGAADCAFWQ 132

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMG 125
             + ++      +        A    +   +   +        M+   DK    +     
Sbjct: 133 RLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM----STQNSAEEIARKAMSIAADICVYTNHNIV 181
           +         A+GSG SYA       +     ++ +A E+AR+A++ AA    Y+   + 
Sbjct: 193 EGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGGCVR 252

Query: 182 L 182
           +
Sbjct: 253 V 253


>gi|197129148|gb|ACH45646.1| putative proteasome C1 subunit variant 2 [Taeniopygia guttata]
 gi|197129149|gb|ACH45647.1| putative proteasome C1 subunit variant 2 [Taeniopygia guttata]
          Length = 279

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 12/181 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V +A D + + G  +   + RKV  +G G ++   AG +AD     
Sbjct: 74  LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIG-GRMLGTMAGGAADCAFWQ 132

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMG 125
             + ++      +        A    +   +   +        M+   DK    +     
Sbjct: 133 RLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM----STQNSAEEIARKAMSIAADICVYTNHNIV 181
           +         A+GSG SYA       +     ++ +A E+AR+A++ AA    Y+   + 
Sbjct: 193 EGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGGCVR 252

Query: 182 L 182
           +
Sbjct: 253 V 253


>gi|323474698|gb|ADX85304.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
 gi|323477432|gb|ADX82670.1| proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
          Length = 211

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 12/196 (6%)

Query: 1   MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           MV+MG++       +  TT + ++ +  VV+A D + S G  V     RKV  +     I
Sbjct: 1   MVIMGNELQLENKILKGTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGI 60

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD------KYLRNLEAMILI 112
              AGS AD   +   L+                     R+       KY   +  +++ 
Sbjct: 61  TT-AGSVADLQFIYNVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIG 119

Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
                  +          E   +A GSG   A+       + + +   A ++A++A+  A
Sbjct: 120 GYDDQPRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSA 179

Query: 170 ADICVYTNHNIVLETL 185
                +T   +++  +
Sbjct: 180 IKRDSFTGTGVIVAKI 195


>gi|194751135|ref|XP_001957882.1| GF23798 [Drosophila ananassae]
 gi|190625164|gb|EDV40688.1| GF23798 [Drosophila ananassae]
          Length = 272

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 71/182 (39%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 42  IVGIIFKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +     R    +A +  + + L   +  I  A      DKT   + +        +
Sbjct: 101 QLELHRLGTEREVRVVAANVMLKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSADK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A+S   +      S EE   + R A  IA+ +   + +  NI L  ++
Sbjct: 161 LPYATMGSGSLAAMSVFESRWRPDMSEEEGKKLVRDA--IASGVFNDLGSGSNIDLCVIR 218

Query: 187 VG 188
            G
Sbjct: 219 KG 220


>gi|71033507|ref|XP_766395.1| proteasome subunit beta type 5 [Theileria parva strain Muguga]
 gi|68353352|gb|EAN34112.1| proteasome subunit beta type 5, putative [Theileria parva]
          Length = 266

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    D  V++A D + S+G  V   +  KV  +    ++   AG +AD      
Sbjct: 54  KGTTTLGFIFDHGVILAVDSRASMGPIVSTQSVSKVIEINSY-LLGTMAGGAADCSYWER 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K    +  +        A    +       +   L A       D     +     +
Sbjct: 113 HLAKLCRLHELRNQCRISVGAASQILANIFYYFKGYGLSAGTMIAGYDLNGPGLYYVSSE 172

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVL 182
               +  + ++GSG  +A         +  S EE      +A+  A     ++   + L
Sbjct: 173 GERVKGKLFSVGSGSMFAYGVIDQGYRSDMSLEEAVELGTRAIYQAGHRDGFSGGFVNL 231


>gi|46105478|ref|XP_380543.1| hypothetical protein FG00367.1 [Gibberella zeae PH-1]
          Length = 270

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 18/187 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISPQIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTLLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI-------CVYTNHNIV 181
             +   + +GSG   A+S          S EE    A+ +A+D         + +  N+ 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKPDLSQEE----AIKLASDAILAGVWNDLGSGSNVD 203

Query: 182 LETLKVG 188
           +  +   
Sbjct: 204 VAIITSD 210


>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           sp. FS406-22]
 gi|302595757|sp|D3S8M7|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
           sp. FS406-22]
          Length = 224

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 70/188 (37%), Gaps = 13/188 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  TT + +  D  V++A D + SLG  V    A+K+ ++    I    AGS  DA  ++
Sbjct: 4   MKGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDY-IAMTIAGSVGDAQAIV 62

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGM 124
             L  + + Y  +  R+   LA    +   L +      +    I          + +  
Sbjct: 63  RLLTAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGGYDLLEGAKLFSLD 122

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
               +  E    A GSG   A     A    + S EE   +A  A+  A +   ++ + I
Sbjct: 123 PLGGMNEEKTFTATGSGSPIAYGVLEAGYDREMSVEEGIKLAINALKSAMERDTFSGNGI 182

Query: 181 VLETLKVG 188
            L  +   
Sbjct: 183 SLAVITKE 190


>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
 gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
          Length = 223

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 76/203 (37%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            K    + +  T L +     V++A D ++SLG ++    + K+ +L    +IA  AG  
Sbjct: 10  PKFSPYEDNGGTTLAIPGPDYVIVAADTRMSLGYSIQTRKSTKLCKLTDKCVIA-SAGMQ 68

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTIT 118
           +DA TL + L+ +L +Y +Q  +    +A    +   L N               D    
Sbjct: 69  SDAATLHKVLKMRLVEYEHQHGKPMSVVAVGQMLSNMLYNRRFFPYYTFNLVAGLDTDGK 128

Query: 119 LV-ITGMGDVLEPENGVMAIGSGGSYALSAAR---------ALMSTQNSAEE---IARKA 165
            +  +           V + GSG +                 + +T  + E+   I + A
Sbjct: 129 GIVFSYDAIGSYQSVEVGSQGSGQTLIQPLLDNQVAFKNHLLVPNTDLTLEQSLSIVKDA 188

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
            + A +  +YT  ++ +  +   
Sbjct: 189 FTSAGERDIYTGDSVEILIITKE 211


>gi|115918161|ref|XP_793038.2| PREDICTED: similar to proteasome subunit beta 7 [Strongylocentrotus
           purpuratus]
 gi|115959536|ref|XP_001185829.1| PREDICTED: similar to proteasome subunit beta 7 [Strongylocentrotus
           purpuratus]
          Length = 273

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 39  GTTIAGLIYKDGVILGADTRATEGTIVADKNCTKIHFIAPNIYCCG-AGTAADTEMTTQM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + ++L   +  I  A      D     + +      
Sbjct: 98  ISSNLELHRLSTGREGRVVTANRMLKQFLFRYQGHIGAALVLGGVDSAGPHLYSIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A+S            EE   + R    IAA I   + +  NI L 
Sbjct: 158 TNKLPFCTMGSGSLAAMSVFEDRFRPDMEEEEAKQLVRDG--IAAGIFNDLGSGTNIDLC 215

Query: 184 TLKVG 188
            +K G
Sbjct: 216 VIKKG 220


>gi|112491166|pdb|2H6J|H Chain H, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
           (Casp Target)
 gi|112491167|pdb|2H6J|I Chain I, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
           (Casp Target)
 gi|112491168|pdb|2H6J|J Chain J, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
           (Casp Target)
 gi|112491169|pdb|2H6J|K Chain K, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
           (Casp Target)
 gi|112491170|pdb|2H6J|L Chain L, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
           (Casp Target)
 gi|112491171|pdb|2H6J|M Chain M, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
           (Casp Target)
 gi|112491172|pdb|2H6J|N Chain N, Crystal Structure Of The Beta F145a Rhodococcus Proteasome
           (Casp Target)
          Length = 294

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 69/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + + G  +   +  KV    + +  AG AG++  A  L+ 
Sbjct: 64  HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSA-AGIAGTAGIAIELVR 122

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 123 LFAVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRA 182

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG   A SA + + S      +A   A +++  AAD 
Sbjct: 183 GRIVSYDVVGGRYEERAGYHAVGSGSLAAKSALKKIYSPDSDEETALRAAIESLYDAADD 242

Query: 173 CVYTNH 178
              T  
Sbjct: 243 DSATGG 248


>gi|118466114|ref|YP_881603.1| PcrB protein [Mycobacterium avium 104]
 gi|302595761|sp|A0QFB5|PSB_MYCA1 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|118167401|gb|ABK68298.1| PcrB protein [Mycobacterium avium 104]
          Length = 303

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VV+AGD + + G  +   + +KV          G AG++A A     
Sbjct: 66  HGTTIVALKYPGGVVLAGDRRSTQGNMIAGRDVKKVYITDDYTA-TGIAGTAAIAVEFAR 124

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R   A  +     + L+             
Sbjct: 125 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAAAMQGLVALPLLAGYDIDARDPEGA 184

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L S     +SA  +A +A+  AAD 
Sbjct: 185 GRIVSFDAAGGWNLEEEGYQSVGSGSIFAKSSMKKLYSQVVDADSAVRVAIEALYDAADD 244

Query: 173 CVYTNH 178
              T  
Sbjct: 245 DSATGG 250


>gi|296269805|ref|YP_003652437.1| proteasome endopeptidase complex [Thermobispora bispora DSM 43833]
 gi|296092592|gb|ADG88544.1| Proteasome endopeptidase complex [Thermobispora bispora DSM 43833]
          Length = 278

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ V  DG VV+AGD + + G  + + +  KV R    + + G AG+++    +  
Sbjct: 49  HATTIVAVICDGGVVMAGDRRATSGNYISQRDIEKVFRADDYSCL-GIAGTASIGLEVAR 107

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y     RS     K  R+   +R    M +     I L              
Sbjct: 108 LFRVELEHYEKTEGRSLSTEGKAHRLATMIRGNLGMAMQGLVVIPLFAAYDPATGKGRIF 167

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               G     +    AIGSG  +A  + + L     S EE  R  ++ 
Sbjct: 168 SYDVGGGPYEQYDYHAIGSGSIFARGSLKKLYRPGCSVEEAIRVCLNA 215


>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
 gi|302595790|sp|A6USJ3|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
          Length = 219

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 75/198 (37%), Gaps = 13/198 (6%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           ++ G +++   M  TT + +  +  VV+A D + ++G  +    A+K+ ++    I    
Sbjct: 1   MISGSEYHKEYMKGTTTVGLICEDGVVLATDKRATMGNLIADKEAKKLYKIDDY-IAMTI 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL--------IA 113
           AGS  DA +L+  L  + + Y  +   +   L+        L       L          
Sbjct: 60  AGSVGDAQSLIRLLSAEAKIYKMRTGNNMTPLSCTTLTSNVLHGNRHYPLLTQLIIGGYD 119

Query: 114 DKTITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                 + +      +  E+   A GSG   A     A   ++ + E+   IA KA+  A
Sbjct: 120 LINGPKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYKSEINIEKGLLIAVKALISA 179

Query: 170 ADICVYTNHNIVLETLKV 187
                Y+ + I L  +  
Sbjct: 180 MQRDAYSGNGISLAKIDK 197


>gi|260161887|dbj|BAI43477.1| proteasome subunit PSMB7 [Eptatretus stoutii]
          Length = 277

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     VV+  D + +    V   N +K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGLIFKDGVVLGADTRATEDTIVADKNCQKIHFIAPNIYCCG-AGTAADTEITTQM 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   LE +     R +        + + L   +        +   D +   + +      
Sbjct: 102 ISSNLELHSLSTGRKARVATACCMLKQMLFRYQGHIGASLVLGGVDISGPSLYSIHPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   + R A  IA+ I   + +  NI + 
Sbjct: 162 TDKLPFVTLGSGSLAAMAVFEDRYKLNMEEEEAKTLVRDA--IASGIFNDLGSGSNIDIC 219

Query: 184 TLKVG 188
            +   
Sbjct: 220 VITRD 224


>gi|251772159|gb|EES52729.1| putative 20S proteasome beta-subunit [Leptospirillum
           ferrodiazotrophum]
          Length = 265

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATT+L +R +G VV+AGD Q S G  V      KV  + + + +A  AG++  A  +  
Sbjct: 44  HATTVLALRYEGGVVMAGDRQASEGYQVASRAISKVLPVDRSSCVA-IAGAAGPALEMAR 102

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
               ++E Y            K  ++ + +R    M +     + L              
Sbjct: 103 LFRVEIEHYEKLEGVMLSTPGKANKLAQMVREALPMAMQGLVVVPLFAAYDPESRRGRIY 162

Query: 126 -----DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E    A GSGG +A +A + L     S   A E A +A+  AAD  + T 
Sbjct: 163 KYDPAGGRYEEESYHANGSGGLFARNALKMLYREGLSRDEAVEAALRALYEAADEDLGTG 222

Query: 178 H 178
            
Sbjct: 223 G 223


>gi|169629258|ref|YP_001702907.1| proteasome (beta subunit) PrcB [Mycobacterium abscessus ATCC 19977]
 gi|302595762|sp|B1MAI2|PSB_MYCA9 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|169241225|emb|CAM62253.1| Proteasome (beta subunit) PrcB [Mycobacterium abscessus]
          Length = 292

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 69/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V+IAGD + + G  +   +  KV+     +   G AG++A A     
Sbjct: 53  HGTTIVALTYRGGVLIAGDRRATQGNYIANRDIDKVQITDNYSA-TGIAGTAAIAVEFAR 111

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R   A  +     + L++            
Sbjct: 112 LYAVELEHYEKLEGVQLTFNGKANRLSALVRGNLAAAMQGLVAVPLLVGYDLDDPNGETA 171

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADI 172
                    G      +G  A+GSG  +A S+ + L        +A  +A +A+  AAD 
Sbjct: 172 GRIVSFDVAGGWHVESDGYQAVGSGSVFAKSSIKKLYRPGGDALTALAVAVEALYDAADD 231

Query: 173 CVYTNH 178
              T  
Sbjct: 232 DSATGG 237


>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
 gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
          Length = 229

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 65/201 (32%), Gaps = 21/201 (10%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                 +  T+L +  +   VIA D ++S G  +   ++ KV +L    ++ G +G   D
Sbjct: 18  FSPYAFNGGTVLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKLTGSTVL-GCSGFHGD 76

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------- 120
             TL + +  +L+ Y +   ++    A    +   L             +  +       
Sbjct: 77  CLTLTKHISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRRFFPYYTYNILAGLDSEGKGC 136

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALM---------STQNS---AEEIARKAMS 167
             +             A GS  +         +          T  +   A  + +   +
Sbjct: 137 VFSFDPVGSYEREVYRAGGSASALLQPLLDNQIGFKNQEGVPHTPLTRDKAVALVKDVFT 196

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  +YT   +++  +   
Sbjct: 197 SAAERDIYTGDAVIINVVSSE 217


>gi|145223664|ref|YP_001134342.1| 20S proteasome, A and B subunits [Mycobacterium gilvum PYR-GCK]
 gi|315443990|ref|YP_004076869.1| proteasome endopeptidase complex, beta component [Mycobacterium sp.
           Spyr1]
 gi|302595765|sp|A4TB64|PSB_MYCGI RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|145216150|gb|ABP45554.1| proteasome endopeptidase complex, beta component. Threonine
           peptidase. MEROPS family T01B [Mycobacterium gilvum
           PYR-GCK]
 gi|315262293|gb|ADT99034.1| proteasome endopeptidase complex, beta component [Mycobacterium sp.
           Spyr1]
          Length = 303

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 71/186 (38%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VV+AGD + + G  +   + +KV       +  G AG++A A     
Sbjct: 63  HGTTIVALKFPGGVVMAGDRRATQGHMIASRDVQKVYITDDYTV-TGIAGTAAIAVEFAR 121

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y      +     K  R+   +R      L     + L+             
Sbjct: 122 LYAVELEHYEKLEGVALTFPGKVNRLATMVRGNLGAALQGFVALPLLAGYDLDDPNPEGA 181

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L S     +SA  +A +A+  AAD 
Sbjct: 182 GRIVSFDAAGGHNLEEEGYQSVGSGSIFAKSSMKKLYSQVTDADSALRVAIEALYDAADD 241

Query: 173 CVYTNH 178
              T  
Sbjct: 242 DSATGG 247


>gi|158316642|ref|YP_001509150.1| 20S proteasome A and B subunits [Frankia sp. EAN1pec]
 gi|302595824|sp|A8LH54|PSB_FRASN RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|158112047|gb|ABW14244.1| 20S proteasome A and B subunits [Frankia sp. EAN1pec]
          Length = 274

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + + G  + + +  KV    + +   G+AG++     L+ 
Sbjct: 51  HGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADEFS-CVGYAGTAGVGAELIR 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE---- 129
             + +LE Y      +    AK  R+   ++    M +     I L      +  E    
Sbjct: 110 LFQVELEHYEKIEGSTLSLDAKANRLAFMVKGNLGMAMQGLAVIPLFAGFDTETGEGRIF 169

Query: 130 ---------PENGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTN 177
                     E    +IGSG  +A  + +       +Q+ A  I+ +A+  AAD    T 
Sbjct: 170 SYDIAAAKSEERTYESIGSGSVFARGSLKKRYRANHSQDDAIRISVEALYDAADDDSATG 229

Query: 178 H 178
            
Sbjct: 230 G 230


>gi|296165182|ref|ZP_06847729.1| proteasome [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899371|gb|EFG78830.1| proteasome [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 297

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VVIAGD + + G  +   + +KV          G AG++A A     
Sbjct: 62  HGTTIVALKYPGGVVIAGDRRSTQGNMIAGRDVKKVYVTDDYTA-TGIAGTAAIAVEFAR 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R   A  +     + L+             
Sbjct: 121 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAAAMQGLVALPLLAGYDIGAPDPEGA 180

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L S     +SA  +A +A+  AAD 
Sbjct: 181 GRIVSFDAAGGWNLEEEGYQSVGSGSIFAKSSMKKLYSRVVDADSAVRVAVEALYDAADD 240

Query: 173 CVYTNH 178
              T  
Sbjct: 241 DSATGG 246


>gi|225424596|ref|XP_002285417.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
 gi|225424598|ref|XP_002285415.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
 gi|296081387|emb|CBI16820.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 10/190 (5%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
             +   TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD  
Sbjct: 34  PFRKTGTTIVGLVFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGTAADTE 92

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITG 123
            + + +  +L+ +     R S  +     +  +L + +        +   D T   + T 
Sbjct: 93  AVTDMVSSQLQLHRYHTGRESRVVTALTLLKSHLFSYQGYVQAALVLGGVDCTGPHLHTI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNI 180
                        +GSG   A++   +      + EE I   + +I + I   + +  N+
Sbjct: 153 YPHGSTDTLPFATMGSGSLAAMAVFESKYHEGLTREEGINLVSEAICSGIFNDLGSGSNV 212

Query: 181 VLETLKVGDE 190
            +  +  G +
Sbjct: 213 DVCVITKGHK 222


>gi|322708975|gb|EFZ00552.1| proteasome subunit beta type 7 precursor [Metarhizium anisopliae
           ARSEF 23]
          Length = 271

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISPQIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTLLKQHLFRYQGYIGAYLVVAGCDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S          + E+  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKPNLTQEDAVKLASEAILAGIFNDLGSGSNVDVAII 207

Query: 186 KVG 188
              
Sbjct: 208 TKD 210


>gi|15897668|ref|NP_342273.1| proteasome subunit [Sulfolobus solfataricus P2]
 gi|284174993|ref|ZP_06388962.1| proteasome subunit [Sulfolobus solfataricus 98/2]
 gi|6015710|emb|CAB57537.1| proteasome, beta subunit [Sulfolobus solfataricus P2]
 gi|13813939|gb|AAK41063.1| Proteasome subunit [Sulfolobus solfataricus P2]
 gi|261602436|gb|ACX92039.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
           solfataricus 98/2]
          Length = 225

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 12/196 (6%)

Query: 1   MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           MV+MG++       +  TT + +R +  V++A D + S G  V     RKV  +     I
Sbjct: 15  MVIMGNELQLENKILKGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGI 74

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD------KYLRNLEAMILI 112
              AGS AD   + + L+                     R+       KY   +  +++ 
Sbjct: 75  TT-AGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIG 133

Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
                  +          E   +A GSG   A+       + + +   A ++A++A+  A
Sbjct: 134 GYDDQPRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSA 193

Query: 170 ADICVYTNHNIVLETL 185
                +T   +++  +
Sbjct: 194 IKRDSFTGTGVIVAKI 209


>gi|195494432|ref|XP_002094837.1| GE22042 [Drosophila yakuba]
 gi|194180938|gb|EDW94549.1| GE22042 [Drosophila yakuba]
          Length = 272

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 14/182 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 42  IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +  Q  R    +A +  + + L   +  I  A      DKT   + +        +
Sbjct: 101 QLELHRLQTDREVRVVAANVMLKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLK 186
                +GSG   A++   +      S EE   + R A  IA+ +   + +  NI L  ++
Sbjct: 161 LPYATMGSGSLAAMTVFESRWRPDLSEEEGKKLVRDA--IASGVFNDLGSGSNIDLCVIR 218

Query: 187 VG 188
            G
Sbjct: 219 KG 220


>gi|50302329|ref|XP_451099.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640230|emb|CAH02687.1| KLLA0A02233p [Kluyveromyces lactis]
          Length = 262

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 10/195 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
             K        TTI+ V+ +G V+IA D + + G  V   N  K+ R+      AG AG+
Sbjct: 20  SHKQPNATSTGTTIVGVKFNGGVIIAADTRSTQGPIVADKNCEKLHRIAPRIWCAG-AGT 78

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSS----VELAKDWRMDKYLRNLEAMILIA--DKTIT 118
           +AD   + + +   +E +     R              + KY  ++ A +++A  D T  
Sbjct: 79  AADTEAVTQLISSNIELHSLYTGREPRVVSSLQMLKQHLFKYQGHIGAYLIVAGVDPTGA 138

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVY 175
            + +             ++GSG   A++   A  +   S EE  +  + +I A I   + 
Sbjct: 139 HLFSIHAHGSTDVGYYQSLGSGSLAAMAVLEANWNQDLSKEEAIKLASDAIEAGIWNDLG 198

Query: 176 TNHNIVLETLKVGDE 190
           +  N+ +  ++VG +
Sbjct: 199 SGSNVDVCVMEVGKD 213


>gi|302595915|sp|Q0SIF9|PSB_RHOSR RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
          Length = 294

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + + G  +   +  KV    + +  AG AG++  A  L+ 
Sbjct: 64  HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSA-AGIAGTAGIAIELVR 122

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 123 LFAVELEHYEKIEGVQLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDEAHA 182

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A SA + + S      +A   A +++  AAD 
Sbjct: 183 GRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADD 242

Query: 173 CVYTNH 178
              T  
Sbjct: 243 DSATGG 248


>gi|195340520|ref|XP_002036861.1| GM12440 [Drosophila sechellia]
 gi|194130977|gb|EDW53020.1| GM12440 [Drosophila sechellia]
          Length = 307

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   D+T   +        
Sbjct: 107 TSAELDLHRLNTERQVPVVCASMMLRRTLFRYQGHIGAALVMGGVDRTGPQLYCIYPCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S            E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDQEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KVG 188
              
Sbjct: 227 TKQ 229


>gi|24639979|ref|NP_572267.1| proteasome beta2R1 subunit [Drosophila melanogaster]
 gi|7290639|gb|AAF46088.1| proteasome beta2R1 subunit [Drosophila melanogaster]
 gi|194353118|emb|CAQ53351.1| CG18341-PA [Drosophila melanogaster]
 gi|194353120|emb|CAQ53352.1| CG18341-PA [Drosophila melanogaster]
 gi|194353122|emb|CAQ53353.1| CG18341-PA [Drosophila melanogaster]
 gi|194353124|emb|CAQ53354.1| CG18341-PA [Drosophila melanogaster]
 gi|194353126|emb|CAQ53355.1| CG18341-PA [Drosophila melanogaster]
 gi|194353128|emb|CAQ53356.1| CG18341-PA [Drosophila melanogaster]
 gi|194353130|emb|CAQ53357.1| CG18341-PA [Drosophila melanogaster]
 gi|194353134|emb|CAQ53359.1| CG18341-PA [Drosophila melanogaster]
 gi|194353136|emb|CAQ53360.1| CG18341-PA [Drosophila melanogaster]
 gi|220949894|gb|ACL87490.1| CG18341-PA [synthetic construct]
 gi|223968609|emb|CAR94035.1| CG18341-PA [Drosophila melanogaster]
 gi|223968611|emb|CAR94036.1| CG18341-PA [Drosophila melanogaster]
 gi|223968617|emb|CAR94039.1| CG18341-PA [Drosophila melanogaster]
 gi|223968619|emb|CAR94040.1| CG18341-PA [Drosophila melanogaster]
 gi|223968621|emb|CAR94041.1| CG18341-PA [Drosophila melanogaster]
 gi|223968623|emb|CAR94042.1| CG18341-PA [Drosophila melanogaster]
 gi|223968625|emb|CAR94043.1| CG18341-PA [Drosophila melanogaster]
 gi|223968627|emb|CAR94044.1| CG18341-PA [Drosophila melanogaster]
          Length = 307

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   D T   +        
Sbjct: 107 TSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQLYCIYPCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S            E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KVG 188
              
Sbjct: 227 TAK 229


>gi|195457144|ref|XP_002075445.1| GK18059 [Drosophila willistoni]
 gi|194171530|gb|EDW86431.1| GK18059 [Drosophila willistoni]
          Length = 311

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L     G +V+  D + + G  +      K+  +    ++   AG + D      
Sbjct: 69  RGTTTLGFIFQGGIVLCADSRATSGIFIGSNEMEKIVEINDN-LLGTMAGCAGDCCYWDR 127

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------TITLVITGMGD 126
            L ++   Y  +  R     A    +         M L           T   +     D
Sbjct: 128 VLMRESRLYELRFKRKLPVRAAARMICNTAFQFRGMGLSMGMMLAGWGPTGPQLAYVDSD 187

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
                     +GSG   A+           +   A E+A +A+  A    +YT   + + 
Sbjct: 188 GERLYGSNFVVGSGSDAAMGVFDFNFRFDMTNEEAFELAERALYYATYSDIYTGGFVRVY 247

Query: 184 TLKV 187
            +  
Sbjct: 248 HITK 251


>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
 gi|302595702|sp|A1RWY6|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
          Length = 200

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 10/185 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     VV+A D + + G  +      K+  +    I A  AG+  DA  L+
Sbjct: 10  LKGTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEIDSH-IAATIAGTVGDAQQLV 68

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGD 126
           +RL  +   Y      S    +        L     ++         D     + +    
Sbjct: 69  DRLRVEARYYKTITGDSMPVKSVATLASLILFQYRPILSVQMLIGGVDSDGPSLFSVDWL 128

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
                    A GSG  YA+S          S EE   +A KA++IA      +   + + 
Sbjct: 129 GTVTREKYTATGSGSPYAVSLLEHEYREDLSLEEAVNLAVKAVNIALARDPGSGEGVDIA 188

Query: 184 TLKVG 188
           T+   
Sbjct: 189 TITKE 193


>gi|289740741|gb|ADD19118.1| 20S proteasome regulatory subunit beta type PSMB7/PSMB10/PUP1
           [Glossina morsitans morsitans]
          Length = 272

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + + G  V   N +K+  L K       AG++AD   + + 
Sbjct: 39  GTTIAGIIFKDGVILGADTRATEGPIVADKNCKKIHYLAKNMYCC-GAGTAADTAAITDL 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R    +  +  + + L   +  I  A      D+T + + +      
Sbjct: 98  ICSQLELHRLNTGRQVQVVVANTLLKQMLFRYQGHISAALVLGGVDRTGSYIYSIHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A++   A      S EE   + R A  IAA +   + +  ++ L 
Sbjct: 158 TDKLPYTTMGSGTLAAMAVFEARWKPDMSEEEGKKLVRDA--IAAGVLNDLGSGSSVDLC 215

Query: 184 TLKVG 188
            ++  
Sbjct: 216 VIRKD 220


>gi|321470386|gb|EFX81362.1| hypothetical protein DAPPUDRAFT_303409 [Daphnia pulex]
          Length = 276

 Score =  117 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 4   MGDKHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M ++ +         TTI        V++  D + + G  V   N  K+  +      AG
Sbjct: 25  MSNQGFPAPKAVKTGTTIAGFIFKDGVILGADTRATEGNIVADKNCFKLHYMAPNIYCAG 84

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------D 114
            AG++AD      ++  +LE +     R       +  + + L   +  I  A      D
Sbjct: 85  -AGTAADLEMTTLQMSSQLELHRLNTGRQVKVATANRLLKQMLFRYQGHIGAALVLGGID 143

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-AEEIARKAMSIAADI- 172
            +   V              +A+GSG   A++   +        AE       +I   I 
Sbjct: 144 SSGPHVCCIYPHGSTDSLPFVAMGSGSLAAMAFLESGWKPDMELAEAKVLMRNAICGGIF 203

Query: 173 -CVYTNHNIVLETLKVG 188
             + +  ++ L  +   
Sbjct: 204 NDLMSGSHVDLCIITRE 220


>gi|240171537|ref|ZP_04750196.1| proteasome (beta subunit) PrcB [Mycobacterium kansasii ATCC 12478]
          Length = 288

 Score =  117 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VVIAGD + + G  +   + +KV          G AG++A A     
Sbjct: 53  HGTTIVALKYPGGVVIAGDRRSTQGNMIAGRDVKKVYITDDYTA-TGIAGTAAVAVEFAR 111

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R   A  +     + L+             
Sbjct: 112 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAAAMQGLIALPLLAGYDIHAADPQTA 171

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L S     +SA  +A +A+  AAD 
Sbjct: 172 GRIVSFDAAGGWNIEEEGYQSVGSGSLFAKSSMKKLYSQVTDGDSALRVAVEALYDAADD 231

Query: 173 CVYTNH 178
              T  
Sbjct: 232 DSATGG 237


>gi|28317309|gb|AAO39651.1| AT12292p [Drosophila melanogaster]
          Length = 308

 Score =  117 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 49  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   D T   +        
Sbjct: 108 TSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQLYCIYPCGS 167

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S            E   ++ R+A+S      + +  NI L  +
Sbjct: 168 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 227

Query: 186 KVG 188
              
Sbjct: 228 TAK 230


>gi|145507274|ref|XP_001439592.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406787|emb|CAK72195.1| unnamed protein product [Paramecium tetraurelia]
          Length = 275

 Score =  117 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 14/199 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M   G K        TTI+ V  DG VV+A D + + G  V   N  K+  L      AG
Sbjct: 25  MKAQGFKEMPFTKTGTTIVGVIFDGGVVMAADTRATAGSIVADKNCEKLHPLAPNIWAAG 84

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------D 114
            AG++AD          KL+     L R S       ++   L      I +A      D
Sbjct: 85  -AGTAADLHHQCAHFNAKLKLQRLNLNRQSRVNEVITKLTAKLFPYRGHIGVALIIGGID 143

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                + +         +   ++GSG   AL    A      +   A ++A +A+   A 
Sbjct: 144 SNGPQLASVSPHGNYVYHPFQSMGSGSLAALGILEAKFQDGLTKQQAIDLAIEAIE--AG 201

Query: 172 I--CVYTNHNIVLETLKVG 188
           I   + +  N+ +  +   
Sbjct: 202 IFHDMGSGSNVDVVAITKE 220


>gi|223993685|ref|XP_002286526.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220977841|gb|EED96167.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 280

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 66/201 (32%), Gaps = 20/201 (9%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +    + +  T L +      V+A D ++S G  ++  N  K+  L +  ++ G AG   
Sbjct: 69  RFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVL-GSAGCKT 127

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D   L   L+ K++ Y +   ++    +    +   L         +   +  +      
Sbjct: 128 DVDQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKG 187

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMST-----------QNSAEEIARKAMS 167
              +             A GSG ++ +     ++S                 EI + A  
Sbjct: 188 AVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRLDQKRELGSEEVVEIVKDAFL 247

Query: 168 IAADICVYTNHNIVLETLKVG 188
            A +  +YT   + +  +   
Sbjct: 248 TAGERDIYTGDAVEIMVITAK 268


>gi|302595900|sp|D0KTH0|PSB2_SULS9 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
          Length = 211

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 12/196 (6%)

Query: 1   MVVMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           MV+MG++       +  TT + +R +  V++A D + S G  V     RKV  +     I
Sbjct: 1   MVIMGNELQLENKILKGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGI 60

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD------KYLRNLEAMILI 112
              AGS AD   + + L+                     R+       KY   +  +++ 
Sbjct: 61  TT-AGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIG 119

Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
                  +          E   +A GSG   A+       + + +   A ++A++A+  A
Sbjct: 120 GYDDQPRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSA 179

Query: 170 ADICVYTNHNIVLETL 185
                +T   +++  +
Sbjct: 180 IKRDSFTGTGVIVAKI 195


>gi|258574641|ref|XP_002541502.1| proteasome component PUP1 [Uncinocarpus reesii 1704]
 gi|237901768|gb|EEP76169.1| proteasome component PUP1 [Uncinocarpus reesii 1704]
          Length = 277

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPSIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   LE +     R    +     + ++L   +        I   D T   + T      
Sbjct: 88  ISSNLELHALSTGRKPRVVTCMTMLKQHLFRYQGYIGAYLVIAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S    +   + + E+ IA  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWRPELTKEDAIALASEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 EQD 210


>gi|332158405|ref|YP_004423684.1| proteasome, subunit beta [Pyrococcus sp. NA2]
 gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
          Length = 216

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +R    V++A D Q SL   V   N RK+  +     I   AGS  D   +   
Sbjct: 25  GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITT-AGSVGDVQMIARI 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           LE +   Y     R     A    +   L             +        +        
Sbjct: 84  LEAEARYYQFTWGRPMSTKAMANLLSNILNENRWFPYLVQIIIGGYVEEPTIANLDPLGG 143

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNH-NIVLET 184
                  A GSG  +AL+              A+++A KA+  A    VYT    + + T
Sbjct: 144 LIFEDYTATGSGTPFALAILEEGYRKNLGIEKAKDLAIKAIKAAGSRDVYTGSKKVQVMT 203

Query: 185 LKVG 188
           +   
Sbjct: 204 ITKD 207


>gi|197129147|gb|ACH45645.1| putative proteasome C1 subunit variant 1 [Taeniopygia guttata]
          Length = 270

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 12/177 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V +A D + + G  +   + RKV  +G G ++   AG +AD     
Sbjct: 74  LHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIG-GRMLGTMAGGAADCAFWQ 132

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMG 125
             + ++      +        A    +   +   +        M+   DK    +     
Sbjct: 133 RLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYVDS 192

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM----STQNSAEEIARKAMSIAADICVYTNH 178
           +         A+GSG SYA       +     ++ +A E+AR+A++ AA    Y+  
Sbjct: 193 EGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGG 249


>gi|301624549|ref|XP_002941563.1| PREDICTED: proteasome subunit beta type-11-like [Xenopus (Silurana)
           tropicalis]
          Length = 277

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 12/188 (6%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      H TT L     G VV A D + S G  V   ++RK   +    ++A  +GSS
Sbjct: 50  PEGPPPPAHGTTTLAFIYSGGVVAATDTRSSAGHLVCSPDSRKATLIHSH-LLATTSGSS 108

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-------ILIADKTIT 118
           AD       L ++   Y  +             +   +     M       +   D+   
Sbjct: 109 ADCQLFGRALARECRIYQLRNGYMPSVRGAAKMLSMIMMPFRGMKVCAAFTLCGWDRNGP 168

Query: 119 LVITGMGDVLEP-ENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICV 174
            +     D      + V+++GSG  YA S              A ++AR+A+  A     
Sbjct: 169 CICYVYNDGTRISSSNVISVGSGSPYAYSIIDDGYRVGMGEEEARKLARRAVCHAGRRDA 228

Query: 175 YTNHNIVL 182
           Y+  ++ +
Sbjct: 229 YSGGSVDV 236


>gi|30688785|ref|NP_850641.1| PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|332643797|gb|AEE77318.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
          Length = 267

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L + +        +   D T   + T      
Sbjct: 98  VSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
                   +GSG   A+S   A      + +E I   A SI + I   + +  N+ +  +
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVI 217

Query: 186 KVGDE 190
             G++
Sbjct: 218 TKGNK 222


>gi|328768690|gb|EGF78736.1| hypothetical protein BATDEDRAFT_17403 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 248

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     +V+  D + + G  V   N  K+  L       G AG++AD       
Sbjct: 16  GTTIVGVVYKDGIVLGADTRATAGPIVADKNCEKIHYLAPNMYCCG-AGTAADTEFTTAL 74

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  KLE +  Q  R    +     + + L   +  I  A      D     + T      
Sbjct: 75  ISSKLELHSLQTGREPRVVTAMTMLKQMLFKYQGHIGAALVLGGYDVNGPQLYTIAPHGS 134

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++   A          A +I   A+   A I   + +  N+ + 
Sbjct: 135 TDKLPFVTMGSGSLAAMAVFEAGWRANMNREEAVQIVCDAIE--AGIFNDLGSGSNVDVT 192

Query: 184 TLKVG 188
            +  G
Sbjct: 193 VITKG 197


>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
 gi|302595842|sp|A5UM14|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
          Length = 204

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 70/183 (38%), Gaps = 8/183 (4%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     VV A + + S+G  V    A K+ ++    +    AGS  DA  L+
Sbjct: 6   LEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIV-TTIAGSVGDAQNLM 64

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR----NLEAMILIADKTITLVITGMGDVL 128
           + +E ++  Y  +        A        LR     ++ ++   D     + +      
Sbjct: 65  KIIEAEVSLYQMRNNDKISVKAAASVTANILRSGPMYVQTLLGGMDGDKPSLYSLDPAGG 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             E+  ++ GSG   A          + + +   EIA +A+  A++   ++ +  ++  +
Sbjct: 125 MIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLVAKV 184

Query: 186 KVG 188
              
Sbjct: 185 TKD 187


>gi|15679213|ref|NP_276330.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|6685781|sp|O27270|PSB_METTH RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|2622311|gb|AAB85691.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 210

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M DK+    +  TT + +     VV A + + S+G  +      K+ ++ +  I A  AG
Sbjct: 1   MNDKNT---LKGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEH-IAATIAG 56

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-------ILIADKT 116
           S ADA +L++ L+ +   Y  +        A        L +           +   D+ 
Sbjct: 57  SVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDEN 116

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADIC 173
              + +         +  ++ GSG   A        S +     A ++A +A+  A +  
Sbjct: 117 GAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERD 176

Query: 174 VYTNHNIVLETLKVGD 189
            Y+ + I++ T+   +
Sbjct: 177 TYSGNGILVATVTEEE 192


>gi|303281104|ref|XP_003059844.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458499|gb|EEH55796.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 275

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V   G VV+  D + + G+TV   N  K+  +       G AG++AD   +   
Sbjct: 16  GTTISGVVFKGGVVLGADTRSTNGETVADKNCEKIHYIAPNIYCCG-AGTAADTEAVTGM 74

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     RSS  +     +  +L   +  +  A      DK    +        
Sbjct: 75  IASNLELHRMATKRSSRVVTALTMLKTHLFKYQGHVGAACVLGGHDKNGPHLFCVYPHGS 134

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A++   A          A+E+  +++   A I   + +  N+ L 
Sbjct: 135 SDALPFATMGSGSLAAMAVFEADFKEDMAEEEAKELVARSIR--AGIFNDLGSGSNVDLC 192

Query: 184 TLKVG 188
            +   
Sbjct: 193 VITAD 197


>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
 gi|222434899|gb|EEE42064.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
          Length = 204

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 70/183 (38%), Gaps = 8/183 (4%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     VV A + + S+G  V    A K+ ++    +    AGS  DA  L+
Sbjct: 6   LEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIV-TTIAGSVGDAQNLM 64

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR----NLEAMILIADKTITLVITGMGDVL 128
           + +E ++  Y  +        A        LR     ++ ++   D     + +      
Sbjct: 65  KIIEAEVSLYQMRNNDKMSVKAAASVTANILRSGPMYVQTLLGGMDGDKPSLYSLDPAGG 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             E+  ++ GSG   A          + + +   EIA +A+  A++   ++ +  ++  +
Sbjct: 125 MIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYLVAKV 184

Query: 186 KVG 188
              
Sbjct: 185 TKD 187


>gi|289643904|ref|ZP_06476008.1| 20S proteasome A and B subunits [Frankia symbiont of Datisca
           glomerata]
 gi|289506290|gb|EFD27285.1| 20S proteasome A and B subunits [Frankia symbiont of Datisca
           glomerata]
          Length = 274

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + ++G  + + +  KV    + +   G+AG++     L+ 
Sbjct: 51  HGTTIVAVTYPGGVMMAGDRRATMGNVIAQRDVEKVFHADEYS-CVGYAGTAGIGADLVR 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------------DKTITLVI 121
             + +LE Y      +    AK  R+   ++N   + L              D     + 
Sbjct: 110 LFQVELEHYEKIEGSTLSLHAKANRLSFMIKNNLGLALQGLAVIPLYAGYDLDAGKGRIF 169

Query: 122 TGMGDVLE-PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
           +         E+G  AIGSG  +A  A +  +    + +E   +A +A+  AAD    T 
Sbjct: 170 SYDITGSRAEEHGFQAIGSGSVFARGALKKKVRDDLTQDETVRVAVEALYDAADDDSATG 229

Query: 178 H 178
            
Sbjct: 230 G 230


>gi|15920692|ref|NP_376361.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
 gi|74574726|sp|Q975D1|PSB2_SULTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|15621475|dbj|BAB65470.1| 207aa long hypothetical proteasome beta subunit [Sulfolobus
           tokodaii str. 7]
          Length = 207

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++    VV+A D + S G  V     RKV  +     I   AGS AD   + + 
Sbjct: 13  GTTTVGIKVKDGVVLAADRRASAGMYVAHKYVRKVLYVAPNIGITT-AGSVADLQFIYDL 71

Query: 75  LEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           L+          +R       +  LA      KYL  +  +++        +        
Sbjct: 72  LKNIYHYNLITGMRPITIKALATYLANMLSFSKYLPYIVQILIGGVDEQPRLYNLDYVGD 131

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E    A GSG   A+           +   A ++AR+A+  +     YT   +++  +
Sbjct: 132 ITEEDYTATGSGSVEAIGVIEDEYRPDMTLDEAADLARRAIFSSIKRDPYTGTGVIVSKI 191

Query: 186 KVG 188
              
Sbjct: 192 TKN 194


>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 251

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 20/199 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T L +     VV+A D ++S G ++M  +  K+ +L    +IA  AG   D 
Sbjct: 42  SPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIA-SAGCKTDV 100

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            TL + L+  +  Y + + +     A    +   L         +   +  +        
Sbjct: 101 TTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSV 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARAL-----MSTQNSAE------EIARKAMSIA 169
            +             A GSG +Y +     L        +  A       E+ ++ +  A
Sbjct: 161 FSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELLVTA 220

Query: 170 ADICVYTNHNIVLETLKVG 188
            +  +YT   + +  +   
Sbjct: 221 GERDIYTGDAVEITIISKD 239


>gi|168046657|ref|XP_001775789.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672796|gb|EDQ59328.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 229

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 25/208 (12%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G        +  T + +      VIA D ++S G +++  +  K+ ++ +  ++A  +G 
Sbjct: 11  GASWSPYDNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHQITEKCVLA-SSGF 69

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKT 116
            AD  +L + L+ + + Y +Q  +     A    +   L         A        ++ 
Sbjct: 70  QADVRSLQKNLDARHQIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEG 129

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEE 160
              V T         +G  + GSG +  +      +                 T+N A +
Sbjct: 130 KGCVYTYDAVGSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESSTPLTENEAVD 189

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVG 188
           + +   + AA+  +YT   + +  +   
Sbjct: 190 LIKDTFASAAERDIYTGDGVEIVIINKD 217


>gi|289617136|emb|CBI56204.1| unnamed protein product [Sordaria macrospora]
          Length = 274

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHFISPNIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTLLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S        Q + EE   +  +A+   A I   + +  N+ L 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKPQLTKEEAMKLCSQAIE--AGIWNDLGSGSNVDLA 205

Query: 184 TLKVG 188
            +   
Sbjct: 206 VITAE 210


>gi|332374408|gb|AEE62345.1| unknown [Dendroctonus ponderosae]
          Length = 275

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 10/186 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI+ +     V++  D + +   TV   N  K+  L       G AG++AD    
Sbjct: 36  QKTGTTIVGIIYADGVILGADTRATEDTTVADKNCEKIHYLAPNMYCCG-AGTAADTEMT 94

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMG 125
            + +  +LE +     R       +  + +YL   +  I  A      D T   + +   
Sbjct: 95  TQMVSSQLELHRLNTNRVPRVATANQILKQYLFRYQGHIGAALVLGGVDSTGPHLYSIFP 154

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                +     +GSG   A++          S  E   + R A+       + +  NI +
Sbjct: 155 HGSTDKLPYTTMGSGSLAAMAVFETRWKPNMSEAEGVKLVRDAVGYGIFNDLGSGSNIDI 214

Query: 183 ETLKVG 188
             ++ G
Sbjct: 215 CIIRKG 220


>gi|297815008|ref|XP_002875387.1| hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321225|gb|EFH51646.1| hypothetical protein ARALYDRAFT_904988 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 273

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L + +        +   D T   + T      
Sbjct: 98  VSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A      + +E   +  +A  I + I   + +  N+ + 
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDIC 215

Query: 184 TLKVGDE 190
            +  G++
Sbjct: 216 VITKGNK 222


>gi|223968605|emb|CAR94033.1| CG18341-PA [Drosophila melanogaster]
 gi|223968607|emb|CAR94034.1| CG18341-PA [Drosophila melanogaster]
 gi|223968613|emb|CAR94037.1| CG18341-PA [Drosophila melanogaster]
 gi|223968615|emb|CAR94038.1| CG18341-PA [Drosophila melanogaster]
          Length = 307

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   D T   +        
Sbjct: 107 TSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQLYCIYPCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S            E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KVG 188
              
Sbjct: 227 TAK 229


>gi|194353116|emb|CAQ53350.1| CG18341-PA [Drosophila melanogaster]
          Length = 307

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   D T   +        
Sbjct: 107 TSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQLYCIYPCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S            E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KVG 188
              
Sbjct: 227 TAK 229


>gi|297788966|ref|XP_002862504.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308064|gb|EFH38762.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  +  R S  +     + K+L + +        +   D T   + T   + L
Sbjct: 98  VSSQLRLHRYETGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIDPNGL 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A      + +E   +  +A  I + I   + +  N+ + 
Sbjct: 158 TETLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDIC 215

Query: 184 TLKVGDE 190
            +  G++
Sbjct: 216 VITKGNK 222


>gi|332190845|gb|AEE28966.1| proteasome subunit beta type-5-A [Arabidopsis thaliana]
          Length = 298

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 60/193 (31%), Gaps = 33/193 (17%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTV----MKANARKVRRLG---------------- 53
             TT L     G V++A D + S+G  +    +K +++ +                    
Sbjct: 56  KGTTTLAFIFKGGVMVAADSRASMGGYISVSSLKNSSKNMHPFDIVDFGRNTTSQSVKKI 115

Query: 54  ---KGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
                 ++   AG +AD       L  K   +     R          +   L +   M 
Sbjct: 116 IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMG 175

Query: 111 LI-------ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEE 160
           L         D+T   +     +    +    ++GSG  YA     +      S   A E
Sbjct: 176 LSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVLDSGYKYDMSVEEASE 235

Query: 161 IARKAMSIAADIC 173
           +AR+++  A    
Sbjct: 236 LARRSIYHATFRD 248


>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
 gi|302595754|sp|D1Z199|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
          Length = 205

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M DK    +   TT + +  +  +V+A + + ++G  +   +A+K+ +L    I    AG
Sbjct: 1   MDDK----QYKGTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDN-IAMTIAG 55

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTIT 118
           S  D   L   L+ + + +  +        A    +   L       +       DK+  
Sbjct: 56  SVGDGQRLARMLQAESKLFELRRHGPMSINALSMLLSNLLWEYRIFYIQVLVGGVDKSGP 115

Query: 119 LVITGMGDVLEP-ENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICV 174
            + +         E    + GSG   A            S E   E+A KA+  A     
Sbjct: 116 KLFSLDPAGGRITEVKFSSTGSGSPLAYGVLEDRYKQDMSVEQGVELAAKALESAMKRDS 175

Query: 175 YTNHNIVLETLK 186
            + + +    + 
Sbjct: 176 ASGNGMQFCVIT 187


>gi|227204261|dbj|BAH56982.1| AT3G27430 [Arabidopsis thaliana]
          Length = 254

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L + +        +   D T   + T      
Sbjct: 98  VSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
                   +GSG   A+S   A      + +E I   A SI + I   + +  N+ +  +
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVI 217

Query: 186 KVGDE 190
             G++
Sbjct: 218 TKGNK 222


>gi|2511578|emb|CAA73621.1| multicatalytic endopeptidase [Arabidopsis thaliana]
          Length = 273

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L + +        +   D T   + T      
Sbjct: 98  VSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
                   +GSG   A+S   A      + +E I   A SI + I   + +  N+ +  +
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVI 217

Query: 186 KVGDE 190
             G++
Sbjct: 218 TKGNK 222


>gi|311742497|ref|ZP_07716306.1| proteasome, beta subunit [Aeromicrobium marinum DSM 15272]
 gi|311314125|gb|EFQ84033.1| proteasome, beta subunit [Aeromicrobium marinum DSM 15272]
          Length = 270

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 66/181 (36%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G VV+AGD + ++G  + + + +KV    + +   G AG++  A  +  
Sbjct: 41  HGTTIVAATFPGGVVMAGDRRATMGNVIAQRDIQKVFATDEYS-CVGIAGTAGIAVEMTR 99

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--ITGMGDVLE-- 129
               +LE Y            K  R+   +R    M +     + L+        V    
Sbjct: 100 LFRVELEHYEKIEGTVLSTDGKANRLATLIRGNLGMAMQGLAVVPLLAAYDLDHGVGRIF 159

Query: 130 ---------PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     E    ++GSG  +A  + + L     S  E      +A+  AAD    T 
Sbjct: 160 AFDVTGNKNEERTFHSVGSGSLFARGSLKKLYRDDLSESETVTAVIQALYDAADDDSATG 219

Query: 178 H 178
            
Sbjct: 220 G 220


>gi|55162805|emb|CAH63453.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional protease 7) [Canis lupus familiaris]
          Length = 252

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 51/179 (28%), Gaps = 35/179 (19%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + + G  +                                
Sbjct: 71  HGTTTLAFKFQHGVIVAVDSRATAGNYIN-------------------------CQYWER 105

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K+   Y  +        A    +   +     M L         DK    +     +
Sbjct: 106 LLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDKKGPGLYYVDQN 165

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVL 182
                  + + GSG +YA     +      S E   E+ R+A++ A     Y+   I +
Sbjct: 166 GTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSGGIINM 224


>gi|259535829|sp|A0QZ47|PSB_MYCS2 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|2293463|gb|AAC45614.1| proteasome beta subunit [Mycobacterium smegmatis str. MC2 155]
          Length = 303

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 71/186 (38%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G V+IAGD + + G  +   + +KV          G AG++A A     
Sbjct: 61  HGTTIVALKYPGGVLIAGDRRSTQGNMIAGRDVQKVYITDDYTA-TGIAGTAAIAVEFAR 119

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      L     + L++            
Sbjct: 120 LYAVELEHYEKLEGVPLTFRGKVNRLAIMVRGNLGAALQGFVALPLLVGYDLDDPHPEGA 179

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L    S  +SA ++A +A+  AAD 
Sbjct: 180 GRIVSFDAAGGWNIEEEGYQSVGSGSIFAKSSMKKLYSQVSDADSALKVAVEALYDAADD 239

Query: 173 CVYTNH 178
              T  
Sbjct: 240 DSATGG 245


>gi|297838367|ref|XP_002887065.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332906|gb|EFH63324.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  +  R S  +     + K+L + +        +   D T   + T   + L
Sbjct: 98  VSSQLRLHRYETGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIDPNGL 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A      + +E   +  +A  I + I   + +  N+ + 
Sbjct: 158 TETLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDIC 215

Query: 184 TLKVGDE 190
            +  G++
Sbjct: 216 VITKGNK 222


>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
          Length = 210

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT L +     V++  D + ++G  +   NA+K+ ++         AG   DA  L+  
Sbjct: 7   GTTTLGITAGDYVIMGTDSRATMGNFISNKNAQKLYKIDTYAG-MTIAGLVGDAQVLVRY 65

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYL------RNLEAMILIADKTITLVITGMGDVL 128
           +  ++E Y  Q   +    A    +   L        +  +++        + +      
Sbjct: 66  MRAEMELYRVQRKINMPIEAAATLLSNMLNQSKYYPYMVQLLVGGFDKKPHIFSIDAAGG 125

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
             E+   + GSG  +      A          A  +A KA+S+A      + + + +  +
Sbjct: 126 SVEDEYASTGSGSPFVYGVLEAEYQPNMKLDDAINLAIKAISVAKQRDSASGNMLQIGVI 185

Query: 186 KVG 188
              
Sbjct: 186 DPE 188


>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 220

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 25/209 (11%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M         +  T+L V  +  VV A D ++S G +V+  + +K+ ++ +  ++A  AG
Sbjct: 1   MRQNWSPYDNNGGTVLAVAGEDYVVCAADTRMSTGYSVLTRDYKKIEKMTEKCVMA-SAG 59

Query: 64  SSADAFTLLERLEKKL--EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----DKT 116
             ADA TL + L+ +    ++ N      V  A+      Y R              DK 
Sbjct: 60  FMADAVTLKKTLKARCVSYEFQNNKEMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDKE 119

Query: 117 ITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMST----------------QNSAE 159
               V T               GSG    +      + T                ++ A 
Sbjct: 120 GKGAVFTYDAVGSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSSATPLSESEAV 179

Query: 160 EIARKAMSIAADICVYTNHNIVLETLKVG 188
           ++ +   + A +  +YT  ++ +  +   
Sbjct: 180 DLVKDCFATAGERDIYTGDSVEIWIINKD 208


>gi|190346667|gb|EDK38809.2| hypothetical protein PGUG_02907 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 265

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  +  G VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGCKFAGGVVIAADTRATAGSIVADKNCEKLHRLAPQIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    +         + KY  +L A +++A  D T   +++      
Sbjct: 88  IASNLELHSLSQNRKPRVITALTMLKQHLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
                  ++GSG   A++          + EE  +  A +I + I   + +  N+ +  +
Sbjct: 148 TDIGQYQSLGSGSLAAMAVLETHWKPDMTKEEAVQLCAQAIESGIWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           +VG +
Sbjct: 208 EVGKD 212


>gi|156363743|ref|XP_001626200.1| predicted protein [Nematostella vectensis]
 gi|156213068|gb|EDO34100.1| predicted protein [Nematostella vectensis]
          Length = 249

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 65/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG++AD   + + 
Sbjct: 16  GTTIAGIVFKDGVILGADTRATEDTIVADKNCSKIHYIAPNIYCCG-AGTAADTEYVTDL 74

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +++ +     R +  +     + + L   +        +   D +   + T      
Sbjct: 75  ISSQIQLHSLNTGRQARIVTSLRMLKQRLFRYQGYISAALVLGGVDFSGPHLHTVYPHGS 134

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
                 + +GSG   A++   +          A+++ R    IAA I   + +  N+ L 
Sbjct: 135 TDSLPYVTMGSGSLAAMAVFESRYRPDMELEEAKQLVRDG--IAAGIFNDLGSGSNVDLC 192

Query: 184 TLKVG 188
            +   
Sbjct: 193 VITKD 197


>gi|295395909|ref|ZP_06806094.1| proteasome, beta subunit [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971182|gb|EFG47072.1| proteasome, beta subunit [Brevibacterium mcbrellneri ATCC 49030]
          Length = 265

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 17/180 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  + +  V++AGD + ++G  +     +KV      ++I G AG++  A  L+  
Sbjct: 46  GTTIVAFKTERGVLMAGDRRATMGNLIASHTIQKVHAADSASVI-GIAGTAGLALELIRL 104

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL------ 128
            + +LE Y            K  R+   LR    + L     + L    +          
Sbjct: 105 FQLELEHYEKIEGTPLSLEGKANRLASMLRGNLGLALQGLAVVPLFAGTVPGTTSGALYS 164

Query: 129 -------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKA---MSIAADICVYTNH 178
                    E    +IGSG  +A  A + L   Q   +E  R A   +  AAD    T  
Sbjct: 165 FDVTGGKYQELDFHSIGSGAGFARGALKKLWKPQLDDDEAVRVAVQTLYDAADDDSATGG 224


>gi|209735338|gb|ACI68538.1| Proteasome subunit beta type-7 precursor [Salmo salar]
          Length = 278

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 14/183 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 44  GTTIAGIVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCG-AGVAADAEVTTQM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +   +E +     R  + +    ++ + L   +  I         D T   + +      
Sbjct: 103 MSSNVELHSLSTGRPPLVVMVTRQLKQMLFRYQGHIGSSLIVGGVDVTGAHLYSVYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S              A+++ R A  IAA I   + +  N+ L 
Sbjct: 163 YDKLPFLTMGSGAGAAISIFEDRYRPNMELEEAKKLVRDA--IAAGIFCDLGSGSNVDLC 220

Query: 184 TLK 186
            + 
Sbjct: 221 VIT 223


>gi|209731378|gb|ACI66558.1| Proteasome subunit beta type-7 precursor [Salmo salar]
 gi|260182184|gb|ACX35611.1| proteasome subunit beta type 7 [Salmo salar]
          Length = 278

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 14/183 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 44  GTTIAGIVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCG-AGVAADAEVTTQM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +   +E +     R  + +    ++ + L   +  I         D T   + +      
Sbjct: 103 MSSNVELHSLSTGRPPLVVTVTRQLKQMLFRYQGHIGSSLIVGGVDVTGAHLYSVYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S              A+++ R A  IAA I   + +  N+ L 
Sbjct: 163 YDKLPFLTMGSGAGAAISIFEDRYRPNMELEEAKKLVRDA--IAAGIFCDLGSGSNVDLC 220

Query: 184 TLK 186
            + 
Sbjct: 221 VIT 223


>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
          Length = 237

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                  +  +++ +  D   VIA D ++S G T+   N  K+  L    I+ G +G   
Sbjct: 25  NFNPYSDNGGSVVALAGDDFCVIAADTRLSTGFTIHTRNQDKLFPLSDTTIL-GCSGCWC 83

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTIT 118
           D  TL   L  +++ Y ++  +     A    +   L +                     
Sbjct: 84  DTTTLTRLLSARMQMYKHEHQKEMSTPATAQMLSIMLYHKRFFPYYVSNILAGLDENGKG 143

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARA--LMS----------TQNSAEEIARKAM 166
            + +        +    A GS G+                       TQ  A  I +   
Sbjct: 144 CIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKNQEGVTPAPLTQEKAIAILKDVF 203

Query: 167 SIAADICVYTNHNIVLETLKVG 188
           + AA+  +YT   I ++ +   
Sbjct: 204 TSAAERDIYTGDGITIKIITKD 225


>gi|302595918|sp|A4X744|PSB2_SALTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PrcB 2; Flags: Precursor
          Length = 279

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 67/185 (36%), Gaps = 21/185 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +   G VV+AGD + ++G  + + +  KV      + + G AG++     L  
Sbjct: 52  HATTIVAIATAGGVVLAGDRRATMGNLIAQRDVEKVHPADAYS-LVGMAGAAGIGIELTR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y            K  R+   +R      +     + L              
Sbjct: 111 LFQVELEHYEKTEGAMLSLDGKANRLAAMVRGNLGAAMQGLAVVPLFAGFDLAATDPAKA 170

Query: 129 ------------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
                         E G  A+GSG  +A SA +       S   A  +A +A+  AAD  
Sbjct: 171 GRIFSFDVTGGPYEETGYDAVGSGSVFAKSALKKRFRLGLSVDDAVRLAVEALYDAADDD 230

Query: 174 VYTNH 178
             T  
Sbjct: 231 TATGG 235


>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
 gi|302595719|sp|A9A2U7|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
          Length = 210

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 61/195 (31%), Gaps = 11/195 (5%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +      +H TT + ++    VV+  D + S G  +   N  K++++     +   AG
Sbjct: 1   MSNNVEEKILHGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGL-TLAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
             ADA  +++ L      +  +        +                 +A       D  
Sbjct: 60  GVADAQNIVDILRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDAE 119

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +          +   +  GSG   A            +   A++IA +A+  A    
Sbjct: 120 GPALFNIDMFGSVEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEAKKIALRAVKAAIVRN 179

Query: 174 VYTNHNIVLETLKVG 188
           + T   I +  +   
Sbjct: 180 IGTGDGINIAIMDKD 194


>gi|18405364|ref|NP_566818.1| PBB1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|82581523|sp|O23710|PSB7A_ARATH RecName: Full=Proteasome subunit beta type-7-A; AltName: Full=20S
           proteasome beta subunit B-1; AltName: Full=Proteasome
           component FA; AltName: Full=Proteasome component FB;
           AltName: Full=Proteasome subunit beta type-2; Flags:
           Precursor
 gi|3421102|gb|AAC32066.1| 20S proteasome beta subunit PBB1 [Arabidopsis thaliana]
 gi|7939516|dbj|BAA95719.1| 20S proteasome beta subunit; multicatalytic endopeptidase
           [Arabidopsis thaliana]
 gi|21554360|gb|AAM63467.1| 20S proteasome beta subunit PBB1 [Arabidopsis thaliana]
 gi|28058828|gb|AAO29958.1| 20S proteasome beta subunit (PBB1) [Arabidopsis thaliana]
 gi|30023762|gb|AAP13414.1| At3g27430 [Arabidopsis thaliana]
 gi|332643798|gb|AEE77319.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
          Length = 273

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L + +        +   D T   + T      
Sbjct: 98  VSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
                   +GSG   A+S   A      + +E I   A SI + I   + +  N+ +  +
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVI 217

Query: 186 KVGDE 190
             G++
Sbjct: 218 TKGNK 222


>gi|145505061|ref|XP_001438497.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405669|emb|CAK71100.1| unnamed protein product [Paramecium tetraurelia]
          Length = 275

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 71/199 (35%), Gaps = 14/199 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M   G K        TTI+ V  +G VV+A D + + G  V   N  K+  L      AG
Sbjct: 25  MKAQGFKEMPFTKTGTTIVGVIFEGGVVMAADTRATAGSIVADKNCEKLHPLAPNIWAAG 84

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------D 114
            AG++AD          KL+     L R S       ++   L      I +A      D
Sbjct: 85  -AGTAADLHHQCAHFNAKLKLQRLNLNRQSRVNEVITKLTTKLFPYRGHIGVALIIGGID 143

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                + +         +   ++GSG   AL    A      +   A ++A +A+   A 
Sbjct: 144 SNGPQLASVSPHGNYVYHPFQSMGSGSLAALGILEAKFQDGLTKQQAIDLAIEAIE--AG 201

Query: 172 I--CVYTNHNIVLETLKVG 188
           I   + +  N+ +  +   
Sbjct: 202 IFHDMGSGSNVDVVAITKE 220


>gi|20260224|gb|AAM13010.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
 gi|21387013|gb|AAM47910.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
          Length = 274

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 69/187 (36%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L + +        +   D T   + T      
Sbjct: 98  VSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG    +S   A      + +E   +  +A  I + I   + +  N+ + 
Sbjct: 158 TDTLPFATMGSGSLAVMSVFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDIC 215

Query: 184 TLKVGDE 190
            +  G +
Sbjct: 216 VITKGHK 222


>gi|324999221|ref|ZP_08120333.1| proteasome subunit beta [Pseudonocardia sp. P1]
          Length = 298

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 22/193 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G VVIAGD + + G  + + +  KV      + + G AGS+  A  ++ 
Sbjct: 67  HGTTIVALTFSGGVVIAGDRRATAGNVIAQRDIEKVFVTDHHSAV-GIAGSAGIALEMVR 125

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
                LE Y            K  ++   +R      +     + L              
Sbjct: 126 LFGVDLEHYEKLEGVPLSLDGKANKLAGMIRQNLGAAMQGFVVVPLFAGFDPTVDDPGRA 185

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMST--QNS-AEEIARKAMSIAADI 172
                    G   +   G  A+GSG  +A S+ + L         A   A +A+  AAD 
Sbjct: 186 GRIVTFDPTGGRYDENLGFHAVGSGSVFAKSSLKKLYDPAADLDGAVRTAIEALYDAADD 245

Query: 173 CVYTNHNIVLETL 185
              T     +  +
Sbjct: 246 DTATGGPDTVRRI 258


>gi|160331155|ref|XP_001712285.1| prsB5 [Hemiselmis andersenii]
 gi|159765732|gb|ABW97960.1| prsB5 [Hemiselmis andersenii]
          Length = 219

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 11/179 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT L       ++++ D + S+G+ +  +N RKV  +    ++   AG +AD F   
Sbjct: 15  WHGTTTLAFVCQSGIIVSVDSRASMGKYIGSSNVRKVIPINDY-MLGTMAGGAADCFFWE 73

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-------EAMILIADKTITLVITGMG 125
             L      Y  Q                 +           AMI+  D+T   +     
Sbjct: 74  RNLGIICHLYELQNQHKISISGASKIFTNMIYKYKNSGLSIGAMIIGWDQTGPGLFYVDS 133

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIV 181
           +    +  ++++GSG ++A     +      S +   E+ + ++  AA    Y+   I 
Sbjct: 134 EANRIKIKMISVGSGSTFAFGILDSGYKWNLSLKEGIELGKNSIFHAAFKDAYSGGKIN 192


>gi|146162799|ref|XP_001010091.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|146146286|gb|EAR89846.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 282

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G  V + +  K+  +       G AG++AD   + +R
Sbjct: 40  GTTIVGLVYKDGVVLGADTRATAGTIVAEKSCSKIHYIAPNMYCCG-AGTAADTQWVTDR 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           L  +LE       R S       R    + +Y  ++ A +++   D     +++      
Sbjct: 99  LSSELELMRLNTNRQSRIAGAIARLREHLYQYQGHVGAHLILGGFDCQGPQLVSVAAHGS 158

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
                   +GSG   A++   +      +   A ++   ++       + +  N+ +  +
Sbjct: 159 FSYLPYATMGSGCLAAIATLESRYRDDLTEQEAIDLVTASIESGIVHDLGSGSNVDVCVI 218

Query: 186 KVG 188
           K  
Sbjct: 219 KRD 221


>gi|269973730|emb|CBE66751.1| CG18341-PA [Drosophila ananassae]
          Length = 322

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L K     G AG++AD   +   
Sbjct: 50  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R+   +     + + L   +        +   D+    +        
Sbjct: 109 TSAELDMHQLNTGRTVPVVCASMLLRRTLFRYQGHIGAALVMGGVDRKGPQIYCIYPCGS 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S               +++ R+A+S      + +  NI L  +
Sbjct: 169 NDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNIDLCVV 228

Query: 186 KVG 188
              
Sbjct: 229 TAK 231


>gi|194763361|ref|XP_001963801.1| GF21212 [Drosophila ananassae]
 gi|190618726|gb|EDV34250.1| GF21212 [Drosophila ananassae]
 gi|269973738|emb|CBE66755.1| CG18341-PA [Drosophila ananassae]
 gi|269973746|emb|CBE66759.1| CG18341-PA [Drosophila ananassae]
          Length = 322

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L K     G AG++AD   +   
Sbjct: 50  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R+   +     + + L   +        +   D+    +        
Sbjct: 109 TSAELDMHQLNTGRTVPVVCASMLLRRTLFRYQGHIGAALVMGGVDRKGPQIYCIYPCGS 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S               +++ R+A+S      + +  NI L  +
Sbjct: 169 NDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNIDLCVV 228

Query: 186 KVG 188
              
Sbjct: 229 TAK 231


>gi|322693280|gb|EFY85146.1| proteasome subunit beta type 7 precursor [Metarhizium acridum CQMa
           102]
          Length = 271

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISPQIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D + T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTLLKQHLFRYQGYIGAYLVVAGCDPSGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S          + E+  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSIFETQWKPHLTQEDAVKLASEAILAGIFNDLGSGSNVDVAII 207

Query: 186 KVG 188
              
Sbjct: 208 TKD 210


>gi|212529024|ref|XP_002144669.1| proteasome component Pup1, putative [Penicillium marneffei ATCC
           18224]
 gi|210074067|gb|EEA28154.1| proteasome component Pup1, putative [Penicillium marneffei ATCC
           18224]
          Length = 277

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIYDNGVVIAADTRATSGPIVADKNCEKLHFISPQIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R+         + ++L   +  I         D T T + T      
Sbjct: 88  ISSNIELHSLSTGRAPRVATCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   ++       E  IA  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPNLDKEGAIAICSEAILAGIFNDLGSGSNVDVCVI 207

Query: 186 KVGD 189
           +   
Sbjct: 208 EKDQ 211


>gi|255637923|gb|ACU19278.1| unknown [Glycine max]
          Length = 271

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     + K+L N +        +   D T   + T      
Sbjct: 97  VSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +        +E   +  +A  I A I   + +  N+ + 
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKESLGRDEGIKLVVEA--ICAGIFNDLGSGSNVDVC 214

Query: 184 TLKVGDE 190
            +  G +
Sbjct: 215 VITKGHK 221


>gi|15237451|ref|NP_198874.1| PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|30693626|ref|NP_851108.1| PBB2; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|82581524|sp|Q7DLS1|PSB7B_ARATH RecName: Full=Proteasome subunit beta type-7-B; AltName: Full=20S
           proteasome beta subunit B-2; AltName: Full=Proteasome
           component FC; AltName: Full=Proteasome subunit beta
           type-2; Flags: Precursor
 gi|3421104|gb|AAC32067.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
 gi|9758084|dbj|BAB08528.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
 gi|332007184|gb|AED94567.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
 gi|332007185|gb|AED94568.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
          Length = 274

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L + +        +   D T   + T      
Sbjct: 98  VSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A      + +E   +  +A  I + I   + +  N+ + 
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDIC 215

Query: 184 TLKVGDE 190
            +  G +
Sbjct: 216 VITKGHK 222


>gi|84998356|ref|XP_953899.1| 20S proteasome beta 5 subunit [Theileria annulata]
 gi|65304897|emb|CAI73222.1| 20S proteasome beta 5 subunit, putative [Theileria annulata]
          Length = 270

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L    D  V++A D + S+G  V   N  KV  +    ++   AG +AD      
Sbjct: 54  KGTTTLGFIFDQGVILAVDSRASMGPIVSTQNVSKVIEINSY-LLGTMAGGAADCSYWER 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K    +  +        A    +       +   L A       D     +     +
Sbjct: 113 HLAKLCRLHELRNQCRISVGAASQILANIFYYFKGYGLSAGTMIAGYDLNGPGLYYVSSE 172

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVL 182
               +  + ++GSG  +A         +  + EE      +A+  A     ++   + L
Sbjct: 173 GERVKGKLFSVGSGSLFAYGVIDQGYRSNMTLEEAVELGTRAIYQAGHRDGFSGGFVNL 231


>gi|269973728|emb|CBE66750.1| CG18341-PA [Drosophila ananassae]
 gi|269973734|emb|CBE66753.1| CG18341-PA [Drosophila ananassae]
 gi|269973740|emb|CBE66756.1| CG18341-PA [Drosophila ananassae]
 gi|269973742|emb|CBE66757.1| CG18341-PA [Drosophila ananassae]
          Length = 322

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L K     G AG++AD   +   
Sbjct: 50  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R+   +     + + L   +        +   D+    +        
Sbjct: 109 TSAELDMHQLNTGRTVPVVCASMLLRRTLFRYQGHIGAALVMGGVDRKGPQIYCIYPCGS 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S               +++ R+A+S      + +  NI L  +
Sbjct: 169 NDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNIDLCVV 228

Query: 186 KVG 188
              
Sbjct: 229 TAK 231


>gi|281210697|gb|EFA84863.1| proteasome subunit beta type 7 [Polysphondylium pallidum PN500]
          Length = 267

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 11/198 (5%)

Query: 1   MVVMGDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
           M+          M   TTI+ V     VV+  D + + G  V   +  K+  +       
Sbjct: 19  MIAKNGMKMPGFMKTGTTIVGVVYADGVVLGADTRATEGPIVADKDCEKIHYIADNIYCC 78

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIA 113
           G AG++AD       +  KL+ +     +    +     + + L   +        +   
Sbjct: 79  G-AGTAADTEYATALISSKLKLHRLATGKQVRVVTALTMLKQMLFKYQGHVSAALILGGI 137

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
           D T   + T        +   + +GSG   A++   A      +   A  +   A+    
Sbjct: 138 DITGPSLHTIYPHGSTDQLPFVTMGSGSLAAMAELEANFKPNMTKQEAITLVADAIKSGI 197

Query: 171 DICVYTNHNIVLETLKVG 188
              + +  N+ +  L   
Sbjct: 198 FNDLGSGSNVNITVLTKE 215


>gi|169867685|ref|XP_001840421.1| proteasome subunit [Coprinopsis cinerea okayama7#130]
 gi|116498582|gb|EAU81477.1| proteasome subunit [Coprinopsis cinerea okayama7#130]
          Length = 274

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+       +V+  D + + G  V   N  K+  + +     G AG++AD       
Sbjct: 37  GTTIVGCLFKDGIVLGADTRATEGDIVADKNCEKIHYITESIRCCG-AGTAADTEFTTNL 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   +E +  Q  R    +     + + L   +  I  A      D T   + T      
Sbjct: 96  ISSNMELHALQTGRKPRVVTAMTMLKQMLFRYQGHIGAALVLGGVDATGPHLFTIHPHGS 155

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++   +        EE   + + A  IAA I   + +  NI   
Sbjct: 156 TDKLPYVTMGSGSLAAMAVFESGWRANMEREEALNLVKAA--IAAGIFNDLGSGSNIDAC 213

Query: 184 TLKV 187
            +  
Sbjct: 214 IITS 217


>gi|302841071|ref|XP_002952081.1| hypothetical protein VOLCADRAFT_92617 [Volvox carteri f.
           nagariensis]
 gi|300262667|gb|EFJ46872.1| hypothetical protein VOLCADRAFT_92617 [Volvox carteri f.
           nagariensis]
          Length = 390

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 82/162 (50%), Positives = 108/162 (66%), Gaps = 27/162 (16%)

Query: 27  VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
           VV+ GDGQVS+G   +K N RKVRR+G+G ++AGFAG++AD  +LLERLE KLE++P QL
Sbjct: 2   VVMIGDGQVSVGTVTVKPNVRKVRRIGEG-VVAGFAGTAADGLSLLERLEMKLEEHPGQL 60

Query: 87  LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
           LR++VELAK WR DK LR L+A +L+AD + TL I+G GDVLEP +GVM           
Sbjct: 61  LRAAVELAKQWRQDKALRFLQAELLVADASTTLTISGNGDVLEPHDGVMG---------- 110

Query: 147 AARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                           +KAM IAAD+C+YTN N  +E++ V 
Sbjct: 111 ----------------KKAMKIAADMCIYTNDNFTVESISVE 136


>gi|269973736|emb|CBE66754.1| CG18341-PA [Drosophila ananassae]
          Length = 322

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L K     G AG++AD   +   
Sbjct: 50  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R+   +     + + L   +        +   D+    +        
Sbjct: 109 TSAELDMHQLNTGRTVPVVCASMLLRRTLFRYQGHIGAALVMGGVDRKGPQIYCIYPCGS 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S               +++ R+A+S      + +  NI L  +
Sbjct: 169 NDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNIDLCVV 228

Query: 186 KVG 188
              
Sbjct: 229 TAK 231


>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
 gi|74558522|sp|Q9V247|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
          Length = 197

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +R    V++A D Q SL   V   N RK+  +     I   AGS  D   +   
Sbjct: 6   GTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITT-AGSVGDVQMIARI 64

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           LE +   Y     R     A    +   L   +         +        +        
Sbjct: 65  LEAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVDEPTIANLDPLGG 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNH-NIVLET 184
              +   A GSG  +A++              A+E+A KA+  A    VYT    I + T
Sbjct: 125 LIFDDYTATGSGTPFAIAILEEGYRKNLGIEKAKELAIKAVKAAGARDVYTGSKKIQVVT 184

Query: 185 LKVG 188
           +   
Sbjct: 185 ITKD 188


>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
           petrolearius DSM 11571]
 gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
           petrolearius DSM 11571]
          Length = 209

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 14/199 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M +       +K   TT + +  DG V++A + + ++G  +    A+KV ++     +  
Sbjct: 2   MHMQSTSENILK--GTTTVGLVFDGGVILATERRATMGNMIASKKAKKVYQIADRIGMTT 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------A 113
             G   DA  L   ++ +   Y  +  R     A    +   L N   M           
Sbjct: 60  AGG-VGDAQQLARWVQVECSLYNIRRGREMSVGASASLLSNILNNNRMMPYYVQLLVGGV 118

Query: 114 DKTITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
           D     + +        PE+ ++A GSG  +A                  ++A +A+  A
Sbjct: 119 DSGGPSIYSVDALGGASPEDDIVATGSGSPFAYGVLEDRFEKGMPEKDCVDLAIRALRSA 178

Query: 170 ADICVYTNHNIVLETLKVG 188
                 +  +I +  +   
Sbjct: 179 MRRDSASGEDISVVVITKD 197


>gi|195642050|gb|ACG40493.1| proteasome subunit beta type 7-A precursor [Zea mays]
          Length = 273

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 67/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     +  +L   +        +   D T   + T      
Sbjct: 97  VSSQLQLHRYATGRESRVVTALTLLKSHLFKYQGHVSAALVLGGVDCTGPHLHTVYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +      + EE   I  +A  I A I   + +  N+ + 
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQIVCEA--ICAGIFNDLGSGSNVDVC 214

Query: 184 TLKVG 188
            +  G
Sbjct: 215 VITKG 219


>gi|297801524|ref|XP_002868646.1| hypothetical protein ARALYDRAFT_493925 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314482|gb|EFH44905.1| hypothetical protein ARALYDRAFT_493925 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 274

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L N +        +   D T   + T      
Sbjct: 98  VSSQLRLHRYQTGRDSRVITALTLLKKHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A      + +E   +  +A  I + I   + +  N+ + 
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDIC 215

Query: 184 TLKVGDE 190
            +  G +
Sbjct: 216 VITKGHK 222


>gi|54025141|ref|YP_119383.1| putative proteasome subunit beta [Nocardia farcinica IFM 10152]
 gi|81374566|sp|Q5YUX2|PSB_NOCFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|54016649|dbj|BAD58019.1| putative proteasome beta subunit [Nocardia farcinica IFM 10152]
          Length = 288

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V+IAGD + + G  +   +  KV      +  AG AG++  A  L+ 
Sbjct: 56  HGTTIVAVSYRGGVLIAGDRRATQGNLLASRDMDKVYITDTFSA-AGIAGTAGMAVELVR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  ++ K +R+     L     + +++            
Sbjct: 115 LFAVELEHYEKIEGVPLTFDGKANKLSKMVRDNLPAALQGLAVVPVLVGYDERAGDPDRA 174

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A ++ + L +       A  IA +++  A+D 
Sbjct: 175 GRIVSYDVVGGRSEERFGYTAVGSGSMFAKTSLKKLYAKGIDQARALRIALESLYDASDD 234

Query: 173 CVYTNH 178
              T  
Sbjct: 235 DTATGG 240


>gi|269972981|emb|CBE67035.1| CG18341-PA [Drosophila atripex]
          Length = 322

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L K     G AG++AD   +   
Sbjct: 50  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R+   +     + + L   +        +   D+    +        
Sbjct: 109 TSAELDMHQLNTGRTVPVVCASMLLRRTLFRYQGHIGAALVMGGVDRKGPQIYCIYPCGS 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S               +++ R+A+S      + +  NI L  +
Sbjct: 169 NDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNIDLCVV 228

Query: 186 KVG 188
              
Sbjct: 229 TAK 231


>gi|21593337|gb|AAM65286.1| 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
          Length = 274

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K L + +        +   D T   + T      
Sbjct: 98  VSSQLRLHRYQTGRDSRVVTALTLLKKXLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A      + +E   +  +A  I + I   + +  N+ + 
Sbjct: 158 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDIC 215

Query: 184 TLKVGDE 190
            +  G +
Sbjct: 216 VITKGHK 222


>gi|195628532|gb|ACG36096.1| proteasome subunit beta type 7-A precursor [Zea mays]
          Length = 272

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 13/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-----AMILIADKTITLVITGMGDVLE 129
           +  +L+ +     R S  +     +  +L   +     A++L  D T   + T       
Sbjct: 97  VSSQLQLHRYATGRESRVVTALTLLKSHLFRYQGHVSAALVLGVDCTGPHLHTVYPHGST 156

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLET 184
                  +GSG   A+S   +      + EE   +  +A  I A I   + +  N+ +  
Sbjct: 157 DTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVSEA--ICAGIFNDLGSGSNVDVCV 214

Query: 185 LKVG 188
           +  G
Sbjct: 215 ITKG 218


>gi|6653277|gb|AAF22654.1| interferon-gamma inducible proteasome subunit LMP7 [Bos taurus]
          Length = 193

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 11/174 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L  +    V++A D + S G  +      KV  +    ++   +G +AD       L K+
Sbjct: 1   LAFKFQHGVIVAVDSRASAGNYIATLKVNKVIEINPY-LLGTMSGCAADCLYWERLLAKE 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPE 131
              Y  +        A    +   +     M L         DK    +     +     
Sbjct: 60  CRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLS 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
             + + GSG S+A     +      S EE   + R+A+  A     Y+   + +
Sbjct: 120 GNMFSTGSGNSHAYGVMDSGYRPDLSIEEAYDLGRRAIVHATHRDSYSGGVVNM 173


>gi|315308144|gb|ADU04475.1| beta-type proteasome 7 subunit [Canis lupus familiaris]
          Length = 277

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI        +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGGVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +GSG   A++            EE A+K  + +IAA +   + +  NI L  
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGVFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|195169339|ref|XP_002025479.1| GL15166 [Drosophila persimilis]
 gi|194108958|gb|EDW31001.1| GL15166 [Drosophila persimilis]
          Length = 327

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIIYRDGVILGADTRATEGPMVSDKNCSKIHYLQNHIYCCG-AGTAADTEMITLT 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
              +L  +     R    +     + + L   +  I  A      D+    +        
Sbjct: 107 TSSQLNLHQMSTKRLVPVVCASIMLRRTLFRYQGHIGAALVVGGVDRWGPQIYCNHSCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A++            E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKLPYAAMGSGTLAAMTVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KV 187
             
Sbjct: 227 TK 228


>gi|226503297|ref|NP_001149857.1| LOC100283485 [Zea mays]
 gi|194702548|gb|ACF85358.1| unknown [Zea mays]
 gi|195612088|gb|ACG27874.1| proteasome subunit beta type 7-A precursor [Zea mays]
 gi|195635121|gb|ACG37029.1| proteasome subunit beta type 7-A precursor [Zea mays]
          Length = 273

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 67/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     +  +L   +        +   D T   + T      
Sbjct: 97  VSSQLQLHRYATGRESRVVTALTLLKSHLFKYQGHVSAALVLGGVDCTGPHLHTVYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +      + EE   I  +A  I A I   + +  N+ + 
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQIVCEA--ICAGIFNDLGSGSNVDVC 214

Query: 184 TLKVG 188
            +  G
Sbjct: 215 VITKG 219


>gi|269973748|emb|CBE66760.1| CG18341-PA [Drosophila ananassae]
          Length = 322

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L K     G AG++AD   +   
Sbjct: 50  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R+   +     + + L   +        +   D+    +        
Sbjct: 109 TSAELDMHQLNTGRTVPVVCASMLLRRTLFRYQGHIGAALVMGGVDRKGPQIYCIYPCGS 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S               +++ R+A+S      + +  NI L  +
Sbjct: 169 NDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNIDLCVV 228

Query: 186 KVG 188
              
Sbjct: 229 TAK 231


>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
 gi|121697221|sp|Q46G14|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanosarcina barkeri
           str. Fusaro]
          Length = 211

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 12/187 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + V     +V+A + + ++G  +    A+KV ++    +    AGS  DA  L+
Sbjct: 7   LKGTTTVGVVCTDGIVLASEQRATMGNFIASKTAKKVYQIDD-LVAMTTAGSVGDAQQLV 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             +  + + Y  +   S         M  +L +     ++        DK    + +   
Sbjct: 66  RLVNVESQLYKMRRNESMTIKGIATLMSNFLNSNRYYPMMVQLLIGGVDKNGPGIYSLDA 125

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIV 181
                 E  + A GSG   A            + +E   +A +A+  A      +  NI 
Sbjct: 126 LGGSIEETRISATGSGSPMAYGVLEDQYREDMTVKEGLDLAIRAIHNATKRDSASGENID 185

Query: 182 LETLKVG 188
           +  +   
Sbjct: 186 VVVITKE 192


>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
 gi|121697373|sp|Q4JAY3|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
          Length = 195

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 12/183 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + ++    VV+A + ++S G  V+  +ARKV +LG+  I     G   D  TL   + 
Sbjct: 7   TAIGIKTKDGVVLAAERRLSYGDFVLSKSARKVFKLGRFGIAGA--GIVGDIQTLTRIMN 64

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLE 129
            +++ Y     R     A    +   L   + +  I        D+    +         
Sbjct: 65  VEIKYYEMYNSRKISARAAAKLLSVILYQNKVLPYISELLFGGVDEDGPKLFILDPIGSL 124

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLK 186
            E+   A+GSG   A+    A  +   +   A+E+A K+M  A +  V +   I +  + 
Sbjct: 125 IEDSYAAVGSGARVAIGVLEAEYNESLTSEAAKELAIKSMKSAVERDVMSGDGIDILIIN 184

Query: 187 VGD 189
             +
Sbjct: 185 KNN 187


>gi|304315325|ref|YP_003850472.1| proteasome, subunit beta [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588784|gb|ADL59159.1| predicted proteasome, subunit beta [Methanothermobacter
           marburgensis str. Marburg]
          Length = 210

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 72/187 (38%), Gaps = 11/187 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     VV A + + S+G  +      K+ ++ +  I A  AGS ADA +L+
Sbjct: 7   LKGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEH-IAATIAGSVADAQSLM 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-------ILIADKTITLVITGMG 125
           + L+ +   Y  +        A        L +           +   D+T   + +   
Sbjct: 66  KYLKAEAALYRMRNSERISIEAAAALAANILHSSRFYPFIVQTLLGGVDETGAKIYSLDP 125

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                 +  ++ GSG   A        + +     A +IA +A+  A +   Y+ + I++
Sbjct: 126 SGGMIPDRFVSTGSGSPVAYGVLEDRYADELYVDDAIDIAIRAIKSAMERDTYSGNGILV 185

Query: 183 ETLKVGD 189
            T+   +
Sbjct: 186 ATVTEEE 192


>gi|170097699|ref|XP_001880069.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164645472|gb|EDR09720.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 273

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 14/186 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+       +V+  D + + G  V   N  K+  + +     G AG++AD       
Sbjct: 37  GTTIVGCLFKDGIVLGADTRATEGPIVADKNCEKIHYITESIRCCG-AGTAADTEFTTAL 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   +E +  Q  R    +     + + L   +        +   D T   + T      
Sbjct: 96  ISSNMEMHALQTGRKPRVVTAMTMLKQMLFRYQGQVGAALVLGGVDATGAHLFTIHPHGS 155

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++   +          A  + +  ++IAA I   + +  NI   
Sbjct: 156 TDKLPYVTMGSGSLAAMAVFESGWKPNMEREDALNLVK--LAIAAGIFNDLGSGSNIDAC 213

Query: 184 TLKVGD 189
            +   +
Sbjct: 214 IITANN 219


>gi|269973732|emb|CBE66752.1| CG18341-PA [Drosophila ananassae]
          Length = 322

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L K     G AG++AD   +   
Sbjct: 50  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R+   +     + + L   +        +   D+    +        
Sbjct: 109 TSAELDMHQLNTGRTVPVVCASMLLRRTLFRYQGHIGAALVMGGVDRKGPQIYCIYPCGS 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S               +++ R+A+S      + +  NI L  +
Sbjct: 169 NDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNIDLCVV 228

Query: 186 KVG 188
              
Sbjct: 229 TAK 231


>gi|325192589|emb|CCA27017.1| proteasome subunit beta type5 putative [Albugo laibachii Nc14]
          Length = 294

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 69/195 (35%), Gaps = 18/195 (9%)

Query: 1   MVVMGDKHYAVKMH---ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
           + +M D+  +  +     TT L       +++A D + ++G  +     +K+  + +  I
Sbjct: 70  LKIMYDEDNSQTLKFEKGTTTLAFIYQNGIIVAVDSRSTMGPFIASQKVKKINEINEY-I 128

Query: 58  IAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD-------WRMDKYLRNLEAMI 110
           +A  AG +AD       L  +   +  +        A             +Y  +L  M+
Sbjct: 129 LATIAGGAADCQFWQRNLSVQCRMFELRNRHRISVRAASKLIANTCNYYKQYGMSLGMMM 188

Query: 111 LIADKTITLVITGMGDVLEP----ENGVMAIGSGGSYALSAARALMSTQNSAEE---IAR 163
           +  D     +     +        +    ++GSG +YA     +      + EE   + R
Sbjct: 189 MGYDNGKPTLYYVDDEGSRMRASDKTPRFSVGSGSTYAYGILDSNWRWDLTDEEAIALGR 248

Query: 164 KAMSIAADICVYTNH 178
           KA+  A     Y+  
Sbjct: 249 KAIYHATHRDAYSGG 263


>gi|68171726|ref|ZP_00545079.1| 20S proteasome, A and B subunits [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67998848|gb|EAM85547.1| 20S proteasome, A and B subunits [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 137

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 72/126 (57%), Positives = 98/126 (77%), Gaps = 1/126 (0%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  K  +  M+ TTIL +R+   V+IAGDGQVSLG TV+K +A+K++RL    +I GFAG
Sbjct: 1   MEHKDNS-TMYGTTILCIRRGNKVIIAGDGQVSLGHTVIKNSAKKIKRLANDTVITGFAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++ADAFTL ERLE KLE++P QLLR+ VELAKDWRMD+YLR LEAM+++ADK+++L+I+G
Sbjct: 60  ATADAFTLFERLESKLEKHPGQLLRACVELAKDWRMDRYLRRLEAMMIVADKSVSLIISG 119

Query: 124 MGDVLE 129
               + 
Sbjct: 120 QRRCIR 125


>gi|198470471|ref|XP_001355321.2| GA14896 [Drosophila pseudoobscura pseudoobscura]
 gi|198145466|gb|EAL32378.2| GA14896 [Drosophila pseudoobscura pseudoobscura]
          Length = 327

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIIYRDGVILGADTRATEGPMVSDKNCSKIHYLQNHIYCCG-AGTAADTEMITLT 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
              +L  +     R    +     + + L   +  I  A      D+    +        
Sbjct: 107 TSSQLNLHQMSTKRLVPVVCASIMLRRTLFRYQGHIGAALVVGGVDRWGPQIYCNHSCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A++            E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKLPYAAMGSGTLAAMTVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KV 187
             
Sbjct: 227 TK 228


>gi|124359794|gb|ABN06120.1| Peptidase T1A, proteasome beta-subunit [Medicago truncatula]
          Length = 271

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 69/185 (37%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     +++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     + ++L N +        +   D T   + T      
Sbjct: 97  VSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS-IAADI--CVYTNHNIVLETL 185
                   +GSG   A+S   +      S +E  +  +  I A I   + +  N+ +  +
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVVESICAGIFNDLGSGSNVDVCVI 216

Query: 186 KVGDE 190
             G +
Sbjct: 217 TKGHK 221


>gi|269973744|emb|CBE66758.1| CG18341-PA [Drosophila ananassae]
          Length = 322

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L K     G AG++AD   +   
Sbjct: 50  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCG-AGTAADTEMMTLM 108

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R+   +     + + L   +        +   D+    +        
Sbjct: 109 TSAELDMHQLNTGRTVPVVCASMLLRRTLFRYQGHIGAALVMGGVDRKGPQIYCIYPCGS 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S               +++ R+A+S      + +  NI L  +
Sbjct: 169 NDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNIDLCVV 228

Query: 186 KVG 188
              
Sbjct: 229 TAK 231


>gi|195565293|ref|XP_002106236.1| GD16756 [Drosophila simulans]
 gi|194203610|gb|EDX17186.1| GD16756 [Drosophila simulans]
          Length = 307

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIIYRDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   D+T   +        
Sbjct: 107 TSAELDLHRLNTERQVPVVCASMMLRRTLFRYQGHIGAALVMGGVDRTGPQLYCIYPCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S            E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLDQEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KVG 188
              
Sbjct: 227 TKQ 229


>gi|298709136|emb|CBJ31081.1| 26S proteasome beta type 7 subunit [Ectocarpus siliculosus]
          Length = 307

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 10/188 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           K+  TTI      G VV+  D + + G  V+  N  K+  L       G AG++AD    
Sbjct: 63  KLTGTTICGCIYKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCG-AGTAADTEKT 121

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMG 125
            E +  +L+         S  +     + + L   +        +   D T   +     
Sbjct: 122 TEMISGQLDLLRLSTGTQSRVVTACTMLKRMLFRYQGYVSAALVLGGVDVTGPHLYNIYP 181

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                +   + +GSG   A+S              A E+ ++A+       + +  N+ +
Sbjct: 182 HGSSDKLPYLTMGSGSLAAMSVFETGFKEDMEEAEAVELVKQAIMAGVFNDLGSGSNVDV 241

Query: 183 ETLKVGDE 190
             ++ G E
Sbjct: 242 TVIRPGGE 249


>gi|217072416|gb|ACJ84568.1| unknown [Medicago truncatula]
          Length = 271

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 70/185 (37%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     +++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     + ++L N +        +   D T   + T      
Sbjct: 97  VSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVDITGPHLHTIYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
                   +GSG   A+S   +      S +E  +  A SI A I   + +  N+ +  +
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVAESICAGIFNDLGSGSNVDVCVI 216

Query: 186 KVGDE 190
             G +
Sbjct: 217 TKGHK 221


>gi|242764710|ref|XP_002340830.1| proteasome component Pup1, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218724026|gb|EED23443.1| proteasome component Pup1, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 277

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 68/184 (36%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIYDKGVVIAADTRATSGPIVADKNCEKLHFISPQIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R          + ++L   +  I         D T T + T      
Sbjct: 88  ISSNIELHSLSTGRPPRVATCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   ++       E  IA  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPNLDKEGAIALCSEAILAGIFNDLGSGSNVDVCVI 207

Query: 186 KVGD 189
           +   
Sbjct: 208 EKDQ 211


>gi|111017863|ref|YP_700835.1| proteasome beta subunit [Rhodococcus jostii RHA1]
 gi|110817393|gb|ABG92677.1| proteasome beta subunit [Rhodococcus jostii RHA1]
          Length = 239

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + + G  +   +  KV    + +  AG AG++  A  L+ 
Sbjct: 9   HGTTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSA-AGIAGTAGIAIELVR 67

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      +     + L++            
Sbjct: 68  LFAVELEHYEKIEGVQLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDEAHA 127

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADI 172
                    G   E   G  A+GSG  +A SA + + S      +A   A +++  AAD 
Sbjct: 128 GRIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADD 187

Query: 173 CVYTNH 178
              T  
Sbjct: 188 DSATGG 193


>gi|242001650|ref|XP_002435468.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
           scapularis]
 gi|215498804|gb|EEC08298.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
           scapularis]
          Length = 279

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 14/194 (7%)

Query: 2   VVMGDKHYAVKMH---ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           ++  D    +K+H    TT L  +  G VV+A D + + G+ +   + +K+  + K  ++
Sbjct: 57  LMKDDSGKQIKIHYDKGTTTLCFKYKGGVVVAADSRATGGEYIGSQSVKKIIVINKY-LL 115

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ 112
              AG +AD       L ++   Y  +        A    +   L N + M L       
Sbjct: 116 GTMAGGAADCVYWQRVLSERCRIYELRNRERISVAAASKLLANILYNYKGMGLSLGVMIS 175

Query: 113 -ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSI 168
             DK    +     +       + + GSG +YA                A E+ARKA+  
Sbjct: 176 GWDKRGPGLYYVDNEGNRLSGSMFSSGSGSTYAFGVLDNGYKFDMEDGEAFELARKAIYH 235

Query: 169 AADICVYTNHNIVL 182
           A      +   + +
Sbjct: 236 ATFRDSASGGIVRV 249


>gi|297841301|ref|XP_002888532.1| hypothetical protein ARALYDRAFT_475769 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334373|gb|EFH64791.1| hypothetical protein ARALYDRAFT_475769 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 273

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 73/187 (39%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  +  R S  +     + K+L + +        +   D T   + T   + L
Sbjct: 98  VSSQLRLHRYETGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTLYPNGL 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A      + +E   +  +A  I + I   + +  N+ + 
Sbjct: 158 TETLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDIC 215

Query: 184 TLKVGDE 190
            +  G++
Sbjct: 216 VITKGNK 222


>gi|325048250|emb|CBW54670.1| 20S proteasome beta-subunit [Streptomyces sp. JS360]
          Length = 281

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT+L +     V+IAGD + ++G  + + +  KV        +A FAGS   A  L++
Sbjct: 53  HGTTVLALVYRDGVLIAGDRRATMGHMISQRDLEKVHPADDHTALA-FAGSVGLALDLVK 111

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +L  +           AK  R+   +R      +     + L+     +       
Sbjct: 112 LYQVELTHFEKIEGIPMTLNAKATRLGHLVRQNLGQAMQGLAVVPLLAGYDPETGKGRVF 171

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTN 177
                          A GSG  +A  A + L   + S  +    A +++  AAD    T 
Sbjct: 172 GYDITGGRFEREDFHAEGSGSVFARGALKKLYRPEMSRRDAALTALQSLYDAADDDSATG 231

Query: 178 H 178
            
Sbjct: 232 G 232


>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
 gi|302595748|sp|A2SS78|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
          Length = 212

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 65/196 (33%), Gaps = 13/196 (6%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  +H  VK   TT + +  DG V++A + + ++G  +    A+KV  +    I    AG
Sbjct: 1   MSQEHQDVKT-GTTTVGIVFDGGVILATERRATMGNLIASKKAKKVHAITD-KIGMTIAG 58

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKT 116
              DA  L+  +  +   Y  +  +     A    +  YL                 D +
Sbjct: 59  GVGDAQQLVRIINVECNLYEIRRGQKISVGAAATILSNYLNQNRFSPYYVQLLVGGVDTS 118

Query: 117 ITLVITGM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
              V +         E   ++ GSG   A            +   A E+A +A+  A   
Sbjct: 119 GPSVYSVDAAGGATLEENFVSTGSGSLTAYGVLEDRFKPNMTEEEAIELAVRALRAAMLR 178

Query: 173 CVYTNHNIVLETLKVG 188
              +     +  +   
Sbjct: 179 DSASGEGYNVVIITQE 194


>gi|302595920|sp|A0RXV1|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
          Length = 210

 Score =  115 bits (288), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 11/192 (5%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +      +H TT + ++    VV+  D + S G  +   N  K++R+     +   AG
Sbjct: 1   MSNNVEEKILHGTTTVGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGL-TLAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
             ADA  +++ L      +  +        +                 +A       D  
Sbjct: 60  GVADAQNIVDVLRYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAV 119

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +          E   +  GSG   A            +A+E   +A +A+  A    
Sbjct: 120 GPALYNIDMFGSVEEKSYVTTGSGSPVAYGTLEEEYRADLTADEAKGVALRAVKAAITRN 179

Query: 174 VYTNHNIVLETL 185
           + T   I +  +
Sbjct: 180 IGTGDGINVAVI 191


>gi|258591517|emb|CBE67818.1| putative proteasome A-type and B-type [NC10 bacterium 'Dutch
           sediment']
          Length = 283

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTIL +R     +IAGD Q + G  +      KV +  + + IA  AG +     + +
Sbjct: 49  HGTTILAMRFRDGALIAGDRQATEGYQISSRRIEKVYKADQYSAIA-IAGVAGPCIEMAK 107

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
             E +L  Y      S     K  ++ + ++    M +     I + +            
Sbjct: 108 LFEVELTHYEKLEGMSLSLEGKANKLSQMVKANLPMAMQGLVVIPIFVGYDVRSGDGKIF 167

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTN 177
                     E    A GSGG  A S  + L     T++ A  +  +A+  AA+  V T 
Sbjct: 168 KYDVTGGRYEETDYYATGSGGKDARSTMKKLYRDRMTEDEAIAVGLEALIDAAEEDVGTG 227

Query: 178 H 178
            
Sbjct: 228 G 228


>gi|159129028|gb|EDP54142.1| proteasome component Pup1, putative [Aspergillus fumigatus A1163]
          Length = 272

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNIELHSLSTGRPPRVVTCMTLLKQHLFRYQGHIGAYLVVAGVDPTGVGLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   ++   Q + EE IA  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPQLNREEAIALCSEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 QKD 210


>gi|194353132|emb|CAQ53358.1| CG18341-PA [Drosophila melanogaster]
          Length = 307

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMITLT 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   D T   +        
Sbjct: 107 TSAELDLHRLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQLYCIYPCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S            E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWKPDLGLEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KVG 188
              
Sbjct: 227 TAK 229


>gi|116791005|gb|ABK25819.1| unknown [Picea sitchensis]
          Length = 273

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 73/197 (37%), Gaps = 14/197 (7%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G +  + +   TTI+ +     V++  D + + G  V   N  K+  +       G AG+
Sbjct: 29  GVQSPSFRKTGTTIVGLVFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGT 87

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTIT 118
           +AD   + + +  +LE +     R S  +     +  +L + +        +   D T  
Sbjct: 88  AADTEAVTDMVSSQLELHRYATGRESRVVTALTLLKSHLYSYQGHVSAALVLGGVDCTGP 147

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--C 173
            + T              +GSG   A++   +      + EE   +  +A  I + I   
Sbjct: 148 HLHTIYPHGSTDTLPFATMGSGSLAAMAMFESRYREGMTREEGIKLVCQA--ICSGIFND 205

Query: 174 VYTNHNIVLETLKVGDE 190
           + +  N+ +  +  G +
Sbjct: 206 LGSGSNVDVCVITKGQK 222


>gi|327289327|ref|XP_003229376.1| PREDICTED: proteasome subunit beta type-11-like [Anolis
           carolinensis]
          Length = 372

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    VV+A D + S G  +   ++RKV  L +  ++A  +G+SAD  T L 
Sbjct: 82  HGTTTLAFRCSHGVVVAADTRSSCGSLISDPSSRKVITLHRH-LLATTSGTSADCATWLR 140

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L   L        +          +   LR   +       ++   D     +     D
Sbjct: 141 LLRCSLRLRHLNEGQQPSVAGAAKLLAFLLRGCHSKDLCVATLLCGWDHNGPGLYYVYSD 200

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                  V ++GSG  YA        S       A  +AR+A+  AA    Y+  N+ L
Sbjct: 201 GTCLSGDVFSVGSGSPYAYGVMDGGYSYDLPHDEAFLLARQAVGHAAHRDSYSGGNVDL 259


>gi|114606759|ref|XP_001167060.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
           type, 8 (large multifunctional protease 7) isoform 1
           [Pan troglodytes]
          Length = 252

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 56/189 (29%), Gaps = 36/189 (19%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +                      
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYIN--------------------- 99

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
                      L K+   Y  +        A    +   +     M L         DK 
Sbjct: 100 ----CQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 155

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 156 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 215

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 216 SYSGGVVNM 224


>gi|294659430|ref|XP_461801.2| DEHA2G05852p [Debaryomyces hansenii CBS767]
 gi|199433955|emb|CAG90262.2| DEHA2G05852p [Debaryomyces hansenii]
          Length = 271

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  +  G VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGCKFKGGVVIAADTRATAGSIVADKNCEKLHRLAPRIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    +         + KY  +L A +++A  D T   +++      
Sbjct: 88  IASNLELHSLSQNRKPRVITALTLLKQHLFKYQGHLGAYLIVAGVDPTGAHLLSVQAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
                  ++GSG   A++          S EE   +   A+       + +  N+ L  +
Sbjct: 148 TDIGQYQSLGSGSLAAMAVLETHWRPDMSREEAMKLVADAIESGIWNDLGSGSNVDLCVM 207

Query: 186 KVGDE 190
           ++G +
Sbjct: 208 EIGKD 212


>gi|242047976|ref|XP_002461734.1| hypothetical protein SORBIDRAFT_02g007210 [Sorghum bicolor]
 gi|241925111|gb|EER98255.1| hypothetical protein SORBIDRAFT_02g007210 [Sorghum bicolor]
          Length = 273

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     +  +L   +        +   D T   + T      
Sbjct: 97  VSSQLQLHRYATGRESRVVTALTLLKSHLFRYQGHVSAALVLGGVDCTGPHLHTVYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +      + EE   +   A  I A I   + +  N+ + 
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVSDA--ICAGIFNDLGSGSNVDVC 214

Query: 184 TLKVG 188
            +  G
Sbjct: 215 VITKG 219


>gi|219362877|ref|NP_001136700.1| hypothetical protein LOC100216834 [Zea mays]
 gi|194696688|gb|ACF82428.1| unknown [Zea mays]
          Length = 273

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     +  +L   +        +   D T   + T      
Sbjct: 97  VSSQLQLHRYATGRESRVVTALTLLKSHLFRYQGHVSAALVLGGVDCTGPHLHTVYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +      + EE   +  +A  I A I   + +  N+ + 
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVSEA--ICAGIFNDLGSGSNVDVC 214

Query: 184 TLKVG 188
            +  G
Sbjct: 215 VITKG 219


>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
 gi|302595840|sp|A3CUS9|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanoculleus marisnigri
           JR1]
          Length = 214

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 14/188 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  TT + +  DG VV+A + + ++G  +    A+K+ ++     +    G   DA  L+
Sbjct: 9   MKGTTTVGLIFDGGVVLATEMRATMGNMIASKRAKKIYQITPRIGLTTAGG-VGDAQQLV 67

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGM- 124
             L+ +   +  +  ++    A    +  YL                 D     V +   
Sbjct: 68  RILQVECNLFEMRRGKTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFDDEGPSVYSVDA 127

Query: 125 -GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNI 180
            G   + E+ ++A GSG  +A                A+++A +A+  A      +  +I
Sbjct: 128 MGGATKEED-IVATGSGSPFAYGVLEDQYRAGMKEDDAKDLAVRAVRSAMRRDSASGEDI 186

Query: 181 VLETLKVG 188
           ++  +   
Sbjct: 187 MVVVITKD 194


>gi|328876747|gb|EGG25110.1| proteasome subunit beta type 7 [Dictyostelium fasciculatum]
          Length = 271

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+  D + + G  V   N  K+  +       G AG++AD       
Sbjct: 34  GTTIVGVVYKDGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCG-AGTAADTENTTNL 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----------DKTITLVITGM 124
           +  KL+ +     +    +     + + L   +  +  A                + T  
Sbjct: 93  ISSKLKLHQLATGKQPRVITALTMLKQMLFKYQGHVSAALILGGVDVIGGVVTPSLFTIH 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIV 181
                 +   + +GSG   A++   A      +   A  +   A+       + +  N+ 
Sbjct: 153 PHGSTDQLPYVTMGSGSLAAMAIFEAFYKKDMTKLEAMTLVADAIKSGIFNDLGSGSNVD 212

Query: 182 LETLKVG 188
           +  +   
Sbjct: 213 VTVISQE 219


>gi|317507302|ref|ZP_07965044.1| proteasome A-type and B-type [Segniliparus rugosus ATCC BAA-974]
 gi|316254405|gb|EFV13733.1| proteasome A-type and B-type [Segniliparus rugosus ATCC BAA-974]
          Length = 279

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 20/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V+IAGD + + G  +     +KV    + +  AG AG+ A AF L+ 
Sbjct: 55  HGTTIVALTYAGGVLIAGDRRATSGNLISHDEMQKVYLTDEYSA-AGIAGTVAIAFELVR 113

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
               +LE Y      +     K  R+   +R      +     + L++    D  EP+  
Sbjct: 114 LFAVELEHYEKVEGVALTFSGKANRLAAMVRGNLEAAMQGLAAVPLLVGLDPDDAEPKGR 173

Query: 134 ----------------VMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
                             +IGSGG +A S  + L   Q     A   A +A++ A +   
Sbjct: 174 IVSYDAAGGRFEEQSGYHSIGSGGLFARSTLKRLHDPQADRTAALRAAVEALADAGEEDS 233

Query: 175 YT 176
            T
Sbjct: 234 AT 235


>gi|134098820|ref|YP_001104481.1| 20S proteasome beta-subunit precursor [Saccharopolyspora erythraea
           NRRL 2338]
 gi|302595782|sp|A4FBY1|PSB_SACEN RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|133911443|emb|CAM01556.1| 20S proteasome beta-subunit precursor [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 284

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 68/186 (36%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + ++G  + + +  K+      + + G AG++  A  ++ 
Sbjct: 55  HGTTIVALTFRGGVLLAGDRRATMGNLIAQRDMEKLYVTDDYSAV-GIAGTAGIALEMVR 113

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------- 120
               +LE Y      S     K  ++   LR      +     + L              
Sbjct: 114 LYAIELEHYEKLEGVSLSLDGKANKLATMLRGNLQGAMAGLAVLPLFAGFDVDADDPDRA 173

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADI 172
                    G       G  A+GSG  +A SA +         ++A   A +A+  AAD 
Sbjct: 174 GRIVSYDITGGRYNELGGYYAVGSGSLFAKSALKKRFDPDADVDTAVRAAVEALYDAADD 233

Query: 173 CVYTNH 178
              T  
Sbjct: 234 DTATGG 239


>gi|310800363|gb|EFQ35256.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 270

 Score =  115 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 69/185 (37%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYIAPQIWCAG-AGTAADTEFTTAI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSNLELHSLSTGRKPRVVTCMTMLKQHLFQYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S          +   A E+A +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETKWKPSLTQDEAVELASQAIQ--AGIFNDLGSGSNVDVA 205

Query: 184 TLKVG 188
            +   
Sbjct: 206 IITKD 210


>gi|72549155|ref|XP_843489.1| proteasome beta 2 subunit [Leishmania major strain Friedlin]
 gi|323364006|emb|CBZ13012.1| putative proteasome beta 2 subunit [Leishmania major strain
           Friedlin]
          Length = 254

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 12/184 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+  D + + G  V     RK+  +    +  G AG+SAD   +   
Sbjct: 29  GTTIVGVVYKDGVVLGADTRATEGSIVADKCCRKIHYMAPNIMCCG-AGTSADTEAVTNM 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   L  +  +  + S  L     + ++L   +        +   D     + T      
Sbjct: 88  VSSHLALHRLETGKQSRVLEALTLLKRHLYRYQGHVSAALVLGGVDVEGPFLATIAPHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI----CVYTNHNIVLET 184
                 + +GSG   A++   A      + EE A++ ++ A         Y+   + +  
Sbjct: 148 TDRLPFVTMGSGSIAAMAQLEAAYKDNMTCEE-AKELVTSAIHKGIFNDPYSGTQVDVCV 206

Query: 185 LKVG 188
           +  G
Sbjct: 207 ITKG 210


>gi|302348116|ref|YP_003815754.1| proteasome beta subunit precursor [Acidilobus saccharovorans
           345-15]
 gi|302328528|gb|ADL18723.1| proteasome beta subunit precursor [Acidilobus saccharovorans
           345-15]
          Length = 212

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 62/184 (33%), Gaps = 10/184 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT + +     VV+A D + + G  +     +K+ +L         +G  ADA  L 
Sbjct: 17  WHGTTTVGLIAGDYVVLAADKRATAGTLIASRTVKKIVKLTDY-AAMTISGLVADAQALA 75

Query: 73  ERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           + + ++   Y     +       +  LA      KY   L  +I+    T   +      
Sbjct: 76  DAVREEARYYELDRGKRLSVYGMATLLANILSSSKYFPYLVQLIVGGYDTAPHLYAIDPY 135

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLE 183
               E  V + GSG   AL             + A  +A +A+  A      T   I + 
Sbjct: 136 GGVTEEKVTSTGSGSPVALGVLERGYKEGISLDDAVNLAAEAIRSAILRDSATGDGIDVT 195

Query: 184 TLKV 187
            +  
Sbjct: 196 IIGR 199


>gi|217074222|gb|ACJ85471.1| unknown [Medicago truncatula]
          Length = 271

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     +++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     + ++L N +        +   D T   +        
Sbjct: 97  VSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGHVSAALVLGGVDITGPHLHAIYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS-IAADI--CVYTNHNIVLETL 185
                   +GSG   A+S   +      S +E  +  +  I A I   + +  N+ +  +
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVVESICAGIFNDLGSGSNVDVCVI 216

Query: 186 KVGDE 190
             G +
Sbjct: 217 TKGHK 221


>gi|242247122|ref|NP_001156136.1| proteasome subunit beta type-like [Acyrthosiphon pisum]
 gi|239799300|dbj|BAH70578.1| ACYPI003417 [Acyrthosiphon pisum]
          Length = 222

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 17/198 (8%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                  +  +I+ +      ++A D ++S G  +      K+ +L   +++ G  G   
Sbjct: 14  NFEPYASNGGSIVAISGKDFAIVASDTRLSEGYMIYTRKQSKLFQLSDKSVL-GCTGCWC 72

Query: 67  DAFTLLERLEKKLE--QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTIT 118
           D  +L   ++ +L+   Y +  +     +A+      Y R      +             
Sbjct: 73  DTLSLTNIIQSQLKSYLYDHNTIMQPNSIAQLLSTLLYSRRFFPYYVYNVLAGLDINGEG 132

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMS--------TQNSAEEIARKAMSIAA 170
            + +        +    A GS G        + +         T+  A  + + A + A 
Sbjct: 133 CLYSYDPVGHCEKVNYTAGGSSGVLMQPFLDSWLGNRTAENPVTEEEALSLVKDAFTAAG 192

Query: 171 DICVYTNHNIVLETLKVG 188
           +  +YT   +V   +K  
Sbjct: 193 ERDIYTGDEVVYNIIKKN 210


>gi|600387|emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
          Length = 230

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 68/212 (32%), Gaps = 25/212 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  T + +      VIA D ++S G +++  +  K+ +L    +++ 
Sbjct: 8   MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLS- 66

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   L + L+ +   Y +Q  +     A    +   L         A   +  +
Sbjct: 67  SSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGL 126

Query: 121 --------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
                    T          G  A GSG +  +      +                 ++ 
Sbjct: 127 DEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEA 186

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            A ++ +   + A +  +YT   + +  LK  
Sbjct: 187 EAVDLVKTVFASATERDIYTGDKLEIMILKAD 218


>gi|291005825|ref|ZP_06563798.1| proteasome subunit beta [Saccharopolyspora erythraea NRRL 2338]
          Length = 281

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 68/186 (36%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +   G V++AGD + ++G  + + +  K+      + + G AG++  A  ++ 
Sbjct: 52  HGTTIVALTFRGGVLLAGDRRATMGNLIAQRDMEKLYVTDDYSAV-GIAGTAGIALEMVR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------- 120
               +LE Y      S     K  ++   LR      +     + L              
Sbjct: 111 LYAIELEHYEKLEGVSLSLDGKANKLATMLRGNLQGAMAGLAVLPLFAGFDVDADDPDRA 170

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADI 172
                    G       G  A+GSG  +A SA +         ++A   A +A+  AAD 
Sbjct: 171 GRIVSYDITGGRYNELGGYYAVGSGSLFAKSALKKRFDPDADVDTAVRAAVEALYDAADD 230

Query: 173 CVYTNH 178
              T  
Sbjct: 231 DTATGG 236


>gi|195130036|ref|XP_002009460.1| GI15360 [Drosophila mojavensis]
 gi|193907910|gb|EDW06777.1| GI15360 [Drosophila mojavensis]
          Length = 313

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 65/183 (35%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+ RL       G AG++AD   +   
Sbjct: 44  GTSIVGIIYQDGVILGADTRATEGPIVSDKNCSKIHRLQDHIYCCG-AGTAADTEQMTLM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   DK    +        
Sbjct: 103 TSAELDLHGLNTGRQVPLICASMMLRRTLFRYQGHISAALVMGGVDKYGPHINCIHPCGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A++      + +      +++ RKA+S      + +  NI L  +
Sbjct: 163 IDKIPYAAMGSGTLAAMAVLEQGWNPELGLEDGKQLVRKAISAGVFNDLGSGSNIDLCVI 222

Query: 186 KVG 188
              
Sbjct: 223 TRD 225


>gi|194889076|ref|XP_001977017.1| GG18789 [Drosophila erecta]
 gi|190648666|gb|EDV45944.1| GG18789 [Drosophila erecta]
          Length = 307

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIICQDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMMTLV 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   D T   +        
Sbjct: 107 TSSELDLHQLNTGRQVPVVCASMLLRRTLFRYQGHIGAALVMGGVDSTGPQIYCIYPCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S        +   E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWHPRLDQEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KVG 188
              
Sbjct: 227 TRK 229


>gi|322796740|gb|EFZ19173.1| hypothetical protein SINV_12036 [Solenopsis invicta]
          Length = 237

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                  +  +++ +  D   VIA D ++S G ++      K+  L    I+ G +G   
Sbjct: 25  SFSPYSDNGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFSLSNTTIL-GCSGCWC 83

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTIT 118
           D  TL   L  +++ Y ++  +     A    +   L +                     
Sbjct: 84  DTLTLTRLLSARMQMYKHEHQKEMSTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKG 143

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARA--LMS----------TQNSAEEIARKAM 166
            + +        +    A GS G+                       TQ  A  I +   
Sbjct: 144 CIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKNQEGVTPTPVTQEKAVAILKDVF 203

Query: 167 SIAADICVYTNHNIVLETLKVG 188
           + AA+  +YT   I ++ +   
Sbjct: 204 TSAAERDIYTGDGITIKIITKD 225


>gi|226509555|ref|NP_001140929.1| hypothetical protein LOC100273007 [Zea mays]
 gi|194701802|gb|ACF84985.1| unknown [Zea mays]
          Length = 272

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIYDNGVVIAADTRATSGPIVADKNCEKLHYIAPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNIELHSLSTGRPPRVITCMTMLKQHLFRYQGHIGAYLVVAGVDPTGIGLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   +        E  IA  A +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESTWKPNLDREGAIALCAEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 EKD 210


>gi|115399202|ref|XP_001215190.1| proteasome component PUP1 precursor [Aspergillus terreus NIH2624]
 gi|114192073|gb|EAU33773.1| proteasome component PUP1 precursor [Aspergillus terreus NIH2624]
          Length = 272

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIYDNGVVIAADTRATSGPIVADKNCEKLHYIAPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNIELHSLSTGRPPRVITCMTMLKQHLFRYQGHIGAYLVVAGVDPTGIGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS-AEEIARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   +        A  IA  A +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESTWKPNLDRAGAIALCAEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 EKD 210


>gi|70989545|ref|XP_749622.1| proteasome component Pup1 [Aspergillus fumigatus Af293]
 gi|66847253|gb|EAL87584.1| proteasome component Pup1, putative [Aspergillus fumigatus Af293]
          Length = 272

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNIELHSLSTGRPPRVVTCMTMLKQHLFRYQGHIGAYLVVAGVDPTGVGLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   ++   Q + EE IA  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPQLNREEAIALCSEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 QKD 210


>gi|325963284|ref|YP_004241190.1| proteasome endopeptidase complex, beta component [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469371|gb|ADX73056.1| proteasome endopeptidase complex, beta component [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 272

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 17/188 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +  +G V++AGD + ++G  +   +  KV    + +++ G AG++  A  L  
Sbjct: 48  HATTIVAMSYEGGVLMAGDRRATMGNVIASRHIEKVFPADRYSVL-GIAGTAGIAIDLTR 106

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y            K  R+   +R    + L     + L              
Sbjct: 107 LFQVELEHYEKIEGTLLSLEGKANRLGAMIRGNLPLALQGLAVVPLFAGFDTSAGVGRLF 166

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E+    +GSG  +A  A + L     S   A  +A +++  AAD    T 
Sbjct: 167 SYDVTGGRYEEHEHHTVGSGSVFARGALKKLWRPNLSAAEAIAVAVESLYDAADDDSATG 226

Query: 178 HNIVLETL 185
               +  L
Sbjct: 227 GPDTVRKL 234


>gi|221055227|ref|XP_002258752.1| 20S proteasome beta subunit [Plasmodium knowlesi strain H]
 gi|193808822|emb|CAQ39524.1| 20S proteasome beta subunit, putative [Plasmodium knowlesi strain
           H]
          Length = 270

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 12/187 (6%)

Query: 7   KHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +     H  TT L  +    +++A D + S+G  +   N  K+  +   NI+   AG +
Sbjct: 50  NNKLFDFHKGTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIEI-NKNILGTMAGGA 108

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTIT 118
           AD     + L K ++ Y  +        A    +   L   +   L         D T  
Sbjct: 109 ADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGF 168

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +     +  + E  + + GSG +YA S   +      S   A E+AR A+  A      
Sbjct: 169 NMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSLEQAVELARNAIYHATFRDGG 228

Query: 176 TNHNIVL 182
           +   + +
Sbjct: 229 SGGKVRV 235


>gi|294950073|ref|XP_002786447.1| proteasome subunit, beta type, 7, putative [Perkinsus marinus ATCC
           50983]
 gi|239900739|gb|EER18243.1| proteasome subunit, beta type, 7, putative [Perkinsus marinus ATCC
           50983]
          Length = 286

 Score =  114 bits (286), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G  V   N  K+  + +    AG AG++AD     ++
Sbjct: 45  GTTICGVVCASCVVLGADTRATTGPIVADKNCNKLHYMAENIYCAG-AGTAADLEHTTKK 103

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  ++E +               R+  YL   +  +  A      D     +        
Sbjct: 104 IRSQMELHRLATEAQPRVGTCVKRLSDYLFQYQGYVGCALVLGGVDVKGPQLYQIYPHGS 163

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
                  A+GSG   A+S          + E   E+ +KA++      + +  N+    +
Sbjct: 164 TDSLPFAAMGSGSLAAMSVLETGYKDNMTVEEGVELVKKAITAGVMNDLGSGGNVDCVII 223

Query: 186 KVGD 189
              +
Sbjct: 224 TKDN 227


>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
 gi|121694316|sp|A0B5B1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanosaeta thermophila
           PT]
          Length = 207

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 70/188 (37%), Gaps = 14/188 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TT + +  DG VV+A + + ++G  +    A+K+ ++     +   AG   DA  L+
Sbjct: 5   FKGTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTT-AGVVGDAQALV 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYL--RNLEAMILI-----ADKTITLVITGM- 124
             ++ +   Y  Q        A    +   L  R     ++       DK    + +   
Sbjct: 64  RMIQAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGVDKMGPKIFSLDA 123

Query: 125 -GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
            G  +E  + +++ GSG   A     +L     S ++   +  +A+  A      + + I
Sbjct: 124 LGGQIEEHD-IVSTGSGSPIAYGVLESLYKPGLSIQDGSVLCVRAVHTAMKRDSASGNGI 182

Query: 181 VLETLKVG 188
            L  +   
Sbjct: 183 ALVRITKD 190


>gi|9910839|sp|Q9UXF3|PSB2_SULSO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
          Length = 208

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 10/182 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +R +  V++A D + S G  V     RKV  +     I   AGS AD   + 
Sbjct: 12  LKGTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITT-AGSVADLQFIY 70

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMD------KYLRNLEAMILIADKTITLVITGMGD 126
           + L+                     R+       KY   +  +++        +      
Sbjct: 71  DVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDDQPRLFNLDYL 130

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E   +A GSG   A+       + + +   A ++A++A+  A     +T   +++ 
Sbjct: 131 GDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIVA 190

Query: 184 TL 185
            +
Sbjct: 191 KI 192


>gi|224078968|ref|XP_002305699.1| predicted protein [Populus trichocarpa]
 gi|118486666|gb|ABK95170.1| unknown [Populus trichocarpa]
 gi|222848663|gb|EEE86210.1| predicted protein [Populus trichocarpa]
          Length = 274

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 14/192 (7%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
             +   TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD  
Sbjct: 35  PFRKTGTTIVGLVFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGTAADTE 93

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITG 123
            + + +  +L+ +     R S  +     + K+L N +        +   D T   + T 
Sbjct: 94  AVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVDCTGPHLHTI 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNH 178
                        +GSG   A+S   +      S +E   I  +A  I + I   + +  
Sbjct: 154 YPHGSTDTLPFATMGSGSLAAMSVFESKYKEGLSRDEGIKIVSEA--ICSGIFNDLGSGS 211

Query: 179 NIVLETLKVGDE 190
           N+ +  +  G +
Sbjct: 212 NVDVCVITKGHK 223


>gi|146418425|ref|XP_001485178.1| hypothetical protein PGUG_02907 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 265

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 12/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  +  G VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGCKFAGGVVIAADTRATAGSIVADKNCEKLHRLAPQIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    +         + KY  +L A +++A  D T   +++      
Sbjct: 88  IASNLELHSLSQNRKPRVITALTMLKQHLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI----CVYTNHNIVLET 184
                  ++GSG   A++          + EE  +   + A ++     + +  N+ +  
Sbjct: 148 TDIGQYQSLGSGSLAAMAVLETHWKPDMTKEEAVQLC-AQAIELGIWNDLGSGSNVDVCV 206

Query: 185 LKVGDE 190
           ++VG +
Sbjct: 207 MEVGKD 212


>gi|307170452|gb|EFN62722.1| Proteasome subunit beta type-1 [Camponotus floridanus]
          Length = 236

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                  +  +++ +  D   VIA D ++S G ++      K+  L    I+ G +G   
Sbjct: 24  SFSPYSDNGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFPLSNTTIL-GCSGCWC 82

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTIT 118
           D  TL   L  +++ Y ++  +     A    +   L +                     
Sbjct: 83  DTLTLTRLLSARMQMYKHEHQKEMTTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKG 142

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARA--LMS----------TQNSAEEIARKAM 166
            + +        +    A GS G+                       TQ  A  I +   
Sbjct: 143 CIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKNQEGVTPAVLTQEKAVAILKDVF 202

Query: 167 SIAADICVYTNHNIVLETLKVG 188
           + AA+  +YT   I ++ +   
Sbjct: 203 TSAAERDIYTGDGISIKIITKD 224


>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
 gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
          Length = 229

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 67/204 (32%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T+L V  +  VV A D ++S G  ++  + +K+ ++    ++A  AG  ADA
Sbjct: 15  SPYDNNGGTVLAVAGEDYVVCAADTRMSTGYNILTRDYKKIDQMSDKCVLA-SAGFMADA 73

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            TL + L+ +   Y  Q  +    ++    +   L             +  +        
Sbjct: 74  VTLKKTLKARCTTYEFQNDKPMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDAEGKGAV 133

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST----------------QNSAEEIARK 164
            T               GSG    +      + T                ++ A ++ + 
Sbjct: 134 FTYDAVGSYERTNYSCQGSGQGLIMPVLDNQLKTVSPLVLPAQSSATPLSESEAVDLVKD 193

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
             + A +  +YT   + +  +   
Sbjct: 194 CFATAGERDIYTGDTVEIWIINKD 217


>gi|56207309|emb|CAI18624.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|123121509|emb|CAM24978.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|123230978|emb|CAM25946.1| proteasome (prosome, macropain) subunit beta type 8 (large
           multifunctional protease 7) [Homo sapiens]
 gi|123291818|emb|CAM25484.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|123296523|emb|CAM26260.1| proteasome (prosome, macropain) subunit beta type 8 (large
           multifunctional protease 7) [Homo sapiens]
 gi|168983735|emb|CAQ07780.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|168984792|emb|CAQ08446.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
 gi|168985345|emb|CAQ08493.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
          Length = 252

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 56/189 (29%), Gaps = 36/189 (19%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +                      
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYIN--------------------- 99

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
                      L K+   Y  +        A    +   +     M L         DK 
Sbjct: 100 ----CQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 155

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 156 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 215

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 216 SYSGGVVNM 224


>gi|15232965|ref|NP_191641.1| PBF1; peptidase/ threonine-type endopeptidase [Arabidopsis
           thaliana]
 gi|297820934|ref|XP_002878350.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
           lyrata]
 gi|12643281|sp|P42742|PSB1_ARATH RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
           proteasome beta subunit F-1; AltName: Full=Proteasome
           component 5; AltName: Full=Proteasome subunit beta
           type-6; AltName: Full=TAS-F22/FAFP98; AltName:
           Full=TAS-G39.20
 gi|577531|emb|CAA56201.1| proteasome subunit [Arabidopsis thaliana]
 gi|3421120|gb|AAC32073.1| 20S proteasome beta subunit PBF1 [Arabidopsis thaliana]
 gi|7329692|emb|CAB82686.1| proteasome component C5 [Arabidopsis thaliana]
 gi|17065428|gb|AAL32868.1| proteasome component C5 [Arabidopsis thaliana]
 gi|20148485|gb|AAM10133.1| proteasome component C5 [Arabidopsis thaliana]
 gi|21554745|gb|AAM63678.1| proteasome component C5 [Arabidopsis thaliana]
 gi|297324188|gb|EFH54609.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332646591|gb|AEE80112.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
 gi|332646593|gb|AEE80114.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
          Length = 223

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 68/212 (32%), Gaps = 25/212 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  T + +      VIA D ++S G +++  +  K+ +L    +++ 
Sbjct: 1   MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLS- 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   L + L+ +   Y +Q  +     A    +   L         A   +  +
Sbjct: 60  SSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGL 119

Query: 121 --------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
                    T          G  A GSG +  +      +                 ++ 
Sbjct: 120 DEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEA 179

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            A ++ +   + A +  +YT   + +  LK  
Sbjct: 180 EAVDLVKTVFASATERDIYTGDKLEIMILKAD 211


>gi|307108770|gb|EFN57009.1| hypothetical protein CHLNCDRAFT_30565 [Chlorella variabilis]
          Length = 271

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 10/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G +H       TTI  +     VV+  D + + G TV   N  K+  +       G AG+
Sbjct: 24  GVQHPGFTKTGTTIAGLIFKDGVVLGADTRSTAGSTVADKNCEKIHFIAPNIYCCG-AGT 82

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTIT 118
           +AD   +   +  +LE +       S  +     +  +L   +        +   D    
Sbjct: 83  AADTENVTGMVASQLELHRYATGTQSRVVTAMTLLKGHLFKYQGHVSAALVLGGVDFRGP 142

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            + T              +GSG   A++   A      S EE   +  +A+       + 
Sbjct: 143 HLFTVYPHGSTDSLPFATMGSGSLNAMAVFEAGFKDDMSREEAMALVARAIRSGVMNDLG 202

Query: 176 TNHNIVLETLKVG 188
           +  N+ L  +   
Sbjct: 203 SGSNVDLCIITKD 215


>gi|332021957|gb|EGI62287.1| Proteasome subunit beta type-7 [Acromyrmex echinatior]
          Length = 277

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 10/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G     VK   TTI  V     V++ GD + +    V    + K+  L       G AG+
Sbjct: 29  GFDSPKVKKTGTTITGVVYKDGVILGGDTRATEDTIVADKYSLKIHYLAPNMYCCG-AGT 87

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTIT 118
           +AD     E +  +LE +     R       +  + + L   +  I  A      D    
Sbjct: 88  AADTEMTTEMIASQLELHRLNTGRVVPVCTANTLIKQMLFRYQGHIGAALILGGFDLDGP 147

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +          +     +GSG   A+S   +      S EE   +   A+       + 
Sbjct: 148 QLYCIYPHGSTEKLKYTTMGSGSLAAMSVLESTWKPDMSEEEAKKLVADAIRAGVFNDLA 207

Query: 176 TNHNIVLETLKVG 188
           +  N+ L  ++  
Sbjct: 208 SGSNVDLCIIRKN 220


>gi|168985574|emb|CAQ10285.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional peptidase 7) [Homo sapiens]
          Length = 252

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 56/189 (29%), Gaps = 36/189 (19%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V+ A D + S G  +                      
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYIN--------------------- 99

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
                      L K+   Y  +        A    +   +     M L         DK 
Sbjct: 100 ----CQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKK 155

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +             + + GSG +YA     +      S EE   + R+A++ A    
Sbjct: 156 GPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRD 215

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 216 SYSGGVVNM 224


>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
 gi|302595768|sp|A6UT20|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
          Length = 217

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 14/200 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M+   D++    M  TT + +  +  +V+A D + ++G  +    A+K+ ++        
Sbjct: 1   MIANNDQYKEY-MKGTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKIDDYMA-MT 58

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            AGS  DA +L+  +  +   Y  +   +    +    +   L        +    I   
Sbjct: 59  IAGSVGDAQSLVRIISAEANLYKLRTGNNIPPHSCAMLLSNVLHGSRHFPFLIQLIIGGY 118

Query: 121 ITGMG---------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
            T  G           L  E    A GSG   A            +  +   +A K+++ 
Sbjct: 119 DTIHGAKLFSLDAVGGLNEETSFTATGSGSPTAFGVLEEEYKKDMTINKGKLLAIKSLTA 178

Query: 169 AADICVYTNHNIVLETLKVG 188
           A     ++ + I L  +   
Sbjct: 179 AMKRDAFSGNGISLAVIDKN 198


>gi|146101733|ref|XP_001469191.1| proteasome beta 2 subunit [Leishmania infantum]
 gi|134073560|emb|CAM72293.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
 gi|322503203|emb|CBZ38287.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 254

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 12/184 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+  D + + G  V     RK+  +    +  G AG+SAD   +   
Sbjct: 29  GTTIVGVVYKDGVVLGADTRATEGSIVADKCCRKIHYMAPNIMCCG-AGTSADTEAVTNM 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   L  +  +  + S  L     + ++L   +        +   D     + T      
Sbjct: 88  VSSHLALHRLETGKQSRVLEALTLLKRHLYRYQGHVSAALVLGGVDVEGPFLATIAPHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI----CVYTNHNIVLET 184
                 + +GSG   A++          + EE A++ ++ A         Y+   + +  
Sbjct: 148 TDRLPFVTMGSGSIAAMAQLEVAYKDNMTCEE-AKELVTSAIHKGIFNDPYSGTQVDVCV 206

Query: 185 LKVG 188
           +   
Sbjct: 207 ITKD 210


>gi|145243882|ref|XP_001394453.1| proteasome component PUP1 [Aspergillus niger CBS 513.88]
 gi|134079136|emb|CAK45948.1| unnamed protein product [Aspergillus niger]
          Length = 272

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIYDNGVVIAADTRATSGPIVADKNCEKLHYIAPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNIELHALSTGRPPRVITCMTMLKQHLFRYQGHIGAYLVVAGVDPTGIGLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   +        E  IA  A +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESTWKPNLDREGAIALCAEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 EKD 210


>gi|66519842|ref|XP_391905.2| PREDICTED: proteasome subunit beta type-7-like [Apis mellifera]
          Length = 277

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+ GD + +    V   N  K+  L +     G AG++AD     + 
Sbjct: 39  GTTIAGVVYKDGVVLGGDTRSTENTIVADKNCSKIHYLAENMYCCG-AGTAADTEMTTQM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R       +  + + L   +  I  A      D     +        
Sbjct: 98  ISSQLELHRLNTNRMVPVCTANAMIKQLLFRYQGHIGAALILGGVDLDGPHLYCIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
              +   ++G+G   A++   +      +   A+E+   A+       + +  N+ L  +
Sbjct: 158 SDRHMYTSMGTGSLAAMAVFESRWKPDMTEEEAKELVADAIRAGVFNDLASGSNVDLCVI 217

Query: 186 KVG 188
           + G
Sbjct: 218 RKG 220


>gi|145544955|ref|XP_001458162.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425981|emb|CAK90765.1| unnamed protein product [Paramecium tetraurelia]
          Length = 275

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 14/199 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M   G K        TTI+ V  DG VV+A D + + G  V   N  K+  L      AG
Sbjct: 25  MKAQGFKEMPFTKTGTTIVGVLFDGGVVMAADTRATAGSIVADKNCEKLHTLAPNIWAAG 84

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------D 114
            AG++AD          KL+     L R S       ++   L      I +A      D
Sbjct: 85  -AGTAADLHHQCAHFNAKLKLQRLNLNRQSRVNEVITKLTSKLFPYRGHIGVALIIGGID 143

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                + +         +   ++GSG   AL    A      +   A ++A +A+   A 
Sbjct: 144 CNGPQLASVSPHGNYVYHPFQSMGSGSLAALGILEAKFQDGLTKQQAIDLAIEAIE--AG 201

Query: 172 I--CVYTNHNIVLETLKVG 188
           I   + +  N+ +  +   
Sbjct: 202 IFHDMGSGSNVDVVAITKD 220


>gi|147898759|ref|NP_001079861.1| proteasome (prosome, macropain) subunit, beta type, 7, gene 2
           [Xenopus laevis]
 gi|33417116|gb|AAH56039.1| MGC68991 protein [Xenopus laevis]
          Length = 279

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA  + + 
Sbjct: 44  GTTIAGIIYKDGVILGADRRATDDMVVADKNCAKIHYITDNIYCCG-AGVAADAENVTQL 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           L   L  +     R       +  + + L   +  I         D     + +      
Sbjct: 103 LSSNLHIHAMSTGRQPRVCTANRILKQMLYRYQGHIGASIIVGGVDIKGPHLYSIYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
                  A+GSG + A++            EE   +  +A++      + +   + L  +
Sbjct: 163 TDAVPFTALGSGSAAAIAVLEDRFKPNMELEEGKRLVTEAITAGIMCDLGSGSGVDLCII 222

Query: 186 KVGD 189
              +
Sbjct: 223 TKEE 226


>gi|255570177|ref|XP_002526049.1| proteasome subunit beta type 7,10, putative [Ricinus communis]
 gi|223534630|gb|EEF36326.1| proteasome subunit beta type 7,10, putative [Ricinus communis]
          Length = 278

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 70/191 (36%), Gaps = 10/191 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            + +   TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD 
Sbjct: 34  SSYRKTGTTIVGLIFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGTAADT 92

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVIT 122
             + + +  +L+ +     R S  +     + K+L N +        +   D T   + T
Sbjct: 93  EAVTDMVSSQLQLHRYHTGRESRVITALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHT 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                         +GSG   A++   +      + +E   +  +A+       + +  N
Sbjct: 153 IYPHGSTDTLPFATMGSGSLAAMAIFESKYREGLNRDEGIKLVTEAICSGVFNDLGSGSN 212

Query: 180 IVLETLKVGDE 190
           + +  +  G +
Sbjct: 213 VDVCVITKGHK 223


>gi|322819015|gb|EFZ26269.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
          Length = 302

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 12/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+  D + + G  V     +K+  +    +  G AG++AD   +   
Sbjct: 76  GTTIVGVVYKEGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCG-AGTAADTEAVTNM 134

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   L  +     + S        + ++L   +        +   D     + T      
Sbjct: 135 VSANLALHRLDTGKQSRVHEALTMLKRHLYRYQGHVSAALVLGGVDVEGPFLATVAPHGS 194

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA--DI--CVYTNHNIVLET 184
                 +++GSG   A+SA         + EE A++ ++ A    I    Y+   + L  
Sbjct: 195 TDRLPFVSMGSGSIAAMSALETGYKENMTLEE-AKELVASAIRKGIFNDPYSGTQVDLCV 253

Query: 185 LKV 187
           +  
Sbjct: 254 ITK 256


>gi|74136045|ref|NP_001027952.1| proteasome Z subunit [Ciona intestinalis]
 gi|2564233|emb|CAA05209.1| proteasome Z subunit [Ciona intestinalis]
          Length = 276

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  +G V++  D + +    V   N  K+  +       G AG++AD     + 
Sbjct: 40  GTTIVGMVFEGGVILGADTRATEDTIVADKNCSKIHYIAPNIYCCG-AGTAADTEMTTQM 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   L+       R +     +  + +YL   +        +   D     + +      
Sbjct: 99  ISSNLQLLRYNTGRPTRVATANRMLKQYLYRYQGHVSAALVLGGVDCNGAHLYSIHPHGS 158

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++              A ++ R A  +AA I   + +  N+ L 
Sbjct: 159 TDKLPYVTMGSGSLAAMATFEMGYKPNMKRPEAMKLVRDA--VAAGIFNDLGSGSNVDLC 216

Query: 184 TL 185
            +
Sbjct: 217 II 218


>gi|124802189|ref|XP_001347396.1| 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
 gi|23494975|gb|AAN35309.1|AE014830_53 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
          Length = 271

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  +    +++A D + S+G  +   N  K+  +   NI+   AG +AD     +
Sbjct: 59  KGTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIEI-NKNILGTMAGGAADCLYWEK 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L K ++ Y  +        A    +   L   +   L         D T   +      
Sbjct: 118 YLGKIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFYVDDS 177

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
             + E  + + GSG +YA S   +      +   A E+AR A+  A      +   + +
Sbjct: 178 GKKVEGNLFSCGSGSTYAYSILDSAYDYNLNLDQAVELARNAIYHATFRDGGSGGKVRV 236


>gi|2582506|gb|AAB82571.1| 20S proteasome beta2 subunit [Drosophila melanogaster]
          Length = 272

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 68/180 (37%), Gaps = 10/180 (5%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     V++  D + + G  V   N  K+  L K     G AG++AD     + +  
Sbjct: 42  IVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCG-AGTAADTEMTTDLISS 100

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +  Q  R    +A +  + + L   +  I  A      DKT   + +        +
Sbjct: 101 QLELHRLQTDREVRVVAANTMLKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDK 160

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
                +GSG   A++   +      S EE   + R A        + +  NI L  ++ G
Sbjct: 161 LPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDADPTGVFNDLGSGSNIDLCVIRKG 220


>gi|291408365|ref|XP_002720512.1| PREDICTED: proteasome beta 7 subunit [Oryctolagus cuniculus]
          Length = 277

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 12/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
             +   + +G G   AL +           EE A+K  + +IAA +   + +  NI L  
Sbjct: 162 TDKLPYVTMGDGSCCALQSYEDRWRPDIEEEE-AKKLVSEAIAAGVFNDLGSGSNIDLCV 220

Query: 185 L 185
           +
Sbjct: 221 I 221


>gi|149235099|ref|XP_001523428.1| proteasome component PUP1 precursor [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452837|gb|EDK47093.1| proteasome component PUP1 precursor [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 272

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  +    VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGCQFKNGVVIAADTRATAGPIVADKNCEKLHRLAPRIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    +         + KY  +L A +++A  D T   +++      
Sbjct: 88  IASNLELHALSQNRQPRVITAVTMLKQHLFKYQGHLGAYLIVAGVDPTGAHLLSVQAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
                  ++GSG   A++          + EE IA  A +I A I   + +  N+ +  +
Sbjct: 148 TDVGKYQSLGSGSLAAMAVLETKFKEDMTKEEAIALCAEAIEAGIWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           +VG +
Sbjct: 208 EVGKD 212


>gi|118468051|ref|YP_888185.1| proteasome subunit beta [Mycobacterium smegmatis str. MC2 155]
 gi|118169338|gb|ABK70234.1| proteasome beta subunit [Mycobacterium smegmatis str. MC2 155]
          Length = 280

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 71/186 (38%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G V+IAGD + + G  +   + +KV          G AG++A A     
Sbjct: 38  HGTTIVALKYPGGVLIAGDRRSTQGNMIAGRDVQKVYITDDYTA-TGIAGTAAIAVEFAR 96

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R      L     + L++            
Sbjct: 97  LYAVELEHYEKLEGVPLTFRGKVNRLAIMVRGNLGAALQGFVALPLLVGYDLDDPHPEGA 156

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L    S  +SA ++A +A+  AAD 
Sbjct: 157 GRIVSFDAAGGWNIEEEGYQSVGSGSIFAKSSMKKLYSQVSDADSALKVAVEALYDAADD 216

Query: 173 CVYTNH 178
              T  
Sbjct: 217 DSATGG 222


>gi|91092850|ref|XP_968855.1| PREDICTED: similar to proteasome beta subunit [Tribolium castaneum]
 gi|270003046|gb|EEZ99493.1| hypothetical protein TcasGA2_TC000069 [Tribolium castaneum]
          Length = 235

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                   +  +++ +  D  VVI  D ++S G ++   +  K+ RL    ++ G +G  
Sbjct: 22  HHFSPYADNGGSVVAIAGDDFVVIGADTRLSAGFSIYTRDQNKLFRLSDTTVL-GCSGCW 80

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTI 117
            D  TL   L  +++ Y  +  ++    A    +   L                  ++  
Sbjct: 81  CDTLTLTRILSARMQMYQQEHNKTMATPACAQMLSTMLYYKRFFPYYISNILVGLDNEGK 140

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARAL---------MSTQNS---AEEIARKA 165
             + +        +    A GS G+                    ++ +   A  I +  
Sbjct: 141 GCIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGLKNMQNVKDSKLTLERAAAIIKDV 200

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  ++T  NI++  +   
Sbjct: 201 FISAAERDIFTGDNILINIITKD 223


>gi|156096783|ref|XP_001614425.1| 20S proteasome beta subunit [Plasmodium vivax SaI-1]
 gi|148803299|gb|EDL44698.1| 20S proteasome beta subunit, putative [Plasmodium vivax]
          Length = 273

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 68/187 (36%), Gaps = 12/187 (6%)

Query: 7   KHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +     H  TT L  +    +++A D + S+G  +   N  K+  +   NI+   AG +
Sbjct: 53  NNKLFDFHKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEI-NKNILGTMAGGA 111

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTIT 118
           AD     + L K ++ Y  +        A    +   L   +   L         D T  
Sbjct: 112 ADCLYWEKYLGKIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGF 171

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +     +  + E  + + GSG +YA S   +      S   A E+AR A+  A      
Sbjct: 172 NMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSLEQAVELARNAIYHATFRDGG 231

Query: 176 TNHNIVL 182
           +   + +
Sbjct: 232 SGGKVRV 238


>gi|147225185|emb|CAN13317.1| proteasome (prosome, macropain) subunit, beta type, 8 (large
           multifunctional protease 7) [Sus scrofa]
          Length = 252

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 58/189 (30%), Gaps = 36/189 (19%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+++  ++M H TT L  +    V++A D + S G  +                      
Sbjct: 61  GERNVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYI---------------------- 98

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
              D       L K+   Y  +        A    +   +     M L         DK 
Sbjct: 99  ---DCQYWERLLAKECRLYYLRNGDRISVSAASKLLSNMMYQYRGMGLSMGSMICGWDKK 155

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +       + + GSG +YA     +      S EE   + R+A+  A    
Sbjct: 156 GPGLYYVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 215

Query: 174 VYTNHNIVL 182
            Y+   + +
Sbjct: 216 SYSGGVVNM 224


>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 238

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 21/206 (10%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           V   +      +  T+L +  +   ++A D ++S G ++   ++ K  +L +  +I G  
Sbjct: 22  VQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVI-GCT 80

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-- 120
           G   D  TL + +E +L+ Y +   ++    A    +   L +           I  +  
Sbjct: 81  GFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE 140

Query: 121 ------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIA 162
                  +         +   A GS  +         +  +N             A ++ 
Sbjct: 141 EGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLV 200

Query: 163 RKAMSIAADICVYTNHNIVLETLKVG 188
           +     AA+  VYT   + +  +   
Sbjct: 201 KDVFISAAERDVYTGDALKICIVTKD 226


>gi|164656220|ref|XP_001729238.1| hypothetical protein MGL_3705 [Malassezia globosa CBS 7966]
 gi|159103128|gb|EDP42024.1| hypothetical protein MGL_3705 [Malassezia globosa CBS 7966]
          Length = 285

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 14/186 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G  V   N  K+  +       G AG++AD   +   
Sbjct: 40  GTTIVGLIYKDGVVLGADTRATEGPIVADKNCEKIHYITDSIRCCG-AGTAADTEFVTNL 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   ++ +     +    LA    + + L   +  I  A      D T   + T      
Sbjct: 99  ISSNMQLHALHTRKRPRVLAALTMLKQRLFQYQGYIGAALVLGGYDSTGPQLFTIAPHGS 158

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S   +    +     A  +   A+   A I   + +  N+ + 
Sbjct: 159 TDKLPYVTMGSGSLAAMSVFESAWRPEMEEQEAVNLVVAAIE--AGIFNDLGSGSNVDVC 216

Query: 184 TLKVGD 189
            ++  +
Sbjct: 217 VIREKE 222


>gi|195470076|ref|XP_002099959.1| GE16434 [Drosophila yakuba]
 gi|194187483|gb|EDX01067.1| GE16434 [Drosophila yakuba]
          Length = 315

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+  L       G AG++AD   +   
Sbjct: 48  GTSIVGIIYQDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCG-AGTAADTEMMTLM 106

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   D +   +        
Sbjct: 107 TSAELDLHQLNTGRQVPVVCASMLLRRTLFRYQGHIGAALVMGGVDSSGPQIYCIYPCGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S            E   ++ R+A+S      + +  NI L  +
Sbjct: 167 NDKIPYAAMGSGTLAAMSVLEHGWQPHLDQEQGKQLVREAISAGVFNDLGSGSNIDLCVI 226

Query: 186 KVG 188
              
Sbjct: 227 TKK 229


>gi|124088284|ref|XP_001347037.1| Proteosome subunit [Paramecium tetraurelia strain d4-2]
 gi|145474495|ref|XP_001423270.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057426|emb|CAH03410.1| Proteosome subunit, putative [Paramecium tetraurelia]
 gi|124390330|emb|CAK55872.1| unnamed protein product [Paramecium tetraurelia]
          Length = 275

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 71/199 (35%), Gaps = 14/199 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M   G K        TTI+ V  DG VV+A D + + G  V   N  K+  L      AG
Sbjct: 25  MKAQGFKEMPFTKTGTTIVGVLFDGGVVMAADTRATAGSIVADKNCEKLHTLAPNIWAAG 84

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------D 114
            AG++AD          KL+     L R S       ++   L      I +A      D
Sbjct: 85  -AGTAADLHHQCAHFNAKLKLQRLNLNRQSRVNEVITKLTSKLFPYRGHIGVALIIGGID 143

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                + +         +   ++GSG   AL    A      +   A ++A +A+   A 
Sbjct: 144 CNGPQLASVSPHGNYVYHPFQSMGSGSLAALGILEAKFQDGLTKQQAIDLAIEAIE--AG 201

Query: 172 I--CVYTNHNIVLETLKVG 188
           I   + +  N+ +  +   
Sbjct: 202 IFHDMGSGSNVDVVAITKD 220


>gi|71659830|ref|XP_821635.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70887019|gb|EAN99784.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
          Length = 302

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 65/183 (35%), Gaps = 12/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+  D + + G  V     +K+  +    +  G AG++AD   +   
Sbjct: 76  GTTIVGVVYKEGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCG-AGTAADTEAVTNM 134

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   L  +     + S        + ++L   +        +   D     + T      
Sbjct: 135 VSANLALHRLDTGKQSRVHEALTMLKRHLYRYQGHVSAALVLGGVDVEGPFLATVAPHGS 194

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA--DI--CVYTNHNIVLET 184
                 +++GSG   A+SA         + EE A++ ++ A    I    Y+   + L  
Sbjct: 195 TDRLPFVSMGSGSIAAMSALETGYKENMTLEE-AKELVASAIRKGIFNDPYSGTQVDLCV 253

Query: 185 LKV 187
           +  
Sbjct: 254 ITK 256


>gi|85111648|ref|XP_964037.1| proteasome subunit beta type 7 precursor [Neurospora crassa OR74A]
 gi|28925797|gb|EAA34801.1| proteasome subunit beta type 7 precursor [Neurospora crassa OR74A]
          Length = 275

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIYDGGVVIAADTRATSGPIVADKNCEKLHFIAPNIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S        Q + EE   +  +A+   A I   + +  N+ L 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKPQLNKEEAMKLCSQAIE--AGIWNDLGSGSNVDLA 205

Query: 184 TLKVG 188
            +   
Sbjct: 206 VITPE 210


>gi|195626826|gb|ACG35243.1| proteasome subunit beta type 7-A precursor [Zea mays]
          Length = 273

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHFMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     +  +L   +        +   D T   + T      
Sbjct: 97  VSSQLQLHRYATGRESRVVTALTLLKSHLFRYQGHVSAALVLGGVDCTGPHLHTAYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +      + EE   +  +A  I A I   + +  N+ + 
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVSEA--ICAGIFNDLGSGSNVDVC 214

Query: 184 TLKVG 188
            +  G
Sbjct: 215 VITKG 219


>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
          Length = 219

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 68/185 (36%), Gaps = 13/185 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +  D  V++A D + SLG  V    A+K+ ++    I    AGS  DA  ++  L
Sbjct: 2   TTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDY-IAMTIAGSVGDAQAIVRLL 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGMG-D 126
             + + Y  +  R+   LA    +   L +      +    I          + +     
Sbjct: 61  IAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLG 120

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
            +  E    A GSG   A     A      S EE   +A  A+  A +   ++ + I L 
Sbjct: 121 GMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLA 180

Query: 184 TLKVG 188
            +   
Sbjct: 181 VITKD 185


>gi|294890789|ref|XP_002773315.1| proteasome subunit, beta type, 7, putative [Perkinsus marinus ATCC
           50983]
 gi|239878367|gb|EER05131.1| proteasome subunit, beta type, 7, putative [Perkinsus marinus ATCC
           50983]
          Length = 289

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 65/184 (35%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G  V   N  K+  + +    AG AG++AD     ++
Sbjct: 45  GTTICGVVCASCVVLGADTRATTGPIVADKNCNKLHYMAENIYCAG-AGTAADLEHTTKK 103

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  ++E +               R+  YL   +  +  A      D     +        
Sbjct: 104 IRSQMELHRLATEAQPRVGTCVKRLSDYLFQYQGYVGCALVLGGVDVKGPQLYQIYPHGS 163

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
                  A+GSG   A+S          +A+   E+ +KA++      + +  N+    +
Sbjct: 164 TDSLPFAAMGSGSLAAMSVLETGYKDNMTADEGVELVKKAITAGVMNDLGSGGNVDCVII 223

Query: 186 KVGD 189
              +
Sbjct: 224 TKDN 227


>gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
 gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 238

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 21/206 (10%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           V   +      +  T+L +  +   ++A D ++S G ++   ++ K  +L +  +I G  
Sbjct: 22  VQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVI-GCT 80

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-- 120
           G   D  TL + +E +L+ Y +   ++    A    +   L +           I  +  
Sbjct: 81  GFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE 140

Query: 121 ------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIA 162
                  +         +   A GS  +         +  +N             A ++ 
Sbjct: 141 EGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLV 200

Query: 163 RKAMSIAADICVYTNHNIVLETLKVG 188
           +     AA+  VYT   + +  +   
Sbjct: 201 KDVFISAAERDVYTGDALKICIVTKD 226


>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 238

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 21/206 (10%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           V   +      +  T+L +  +   ++A D ++S G ++   ++ K  +L +  +I G  
Sbjct: 22  VQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVI-GCT 80

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-- 120
           G   D  TL + +E +L+ Y +   ++    A    +   L +           I  +  
Sbjct: 81  GFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE 140

Query: 121 ------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIA 162
                  +         +   A GS  +         +  +N             A ++ 
Sbjct: 141 EGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLV 200

Query: 163 RKAMSIAADICVYTNHNIVLETLKVG 188
           +     AA+  VYT   + +  +   
Sbjct: 201 KDVFISAAERDVYTGDALKICIVTKD 226


>gi|119480173|ref|XP_001260115.1| proteasome component Pup1, putative [Neosartorya fischeri NRRL 181]
 gi|119408269|gb|EAW18218.1| proteasome component Pup1, putative [Neosartorya fischeri NRRL 181]
          Length = 272

 Score =  113 bits (284), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNVELHSLSTGRPPRVITCMTMLKQHLFRYQGHIGAYLVVAGVDPTGVGLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   ++   Q + EE IA  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPQLNREEAIALCSEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 QKD 210


>gi|312197566|ref|YP_004017627.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
 gi|311228902|gb|ADP81757.1| 20S proteasome A and B subunits [Frankia sp. EuI1c]
          Length = 274

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 14/163 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + + G  +   +  KV    + + + G+AG++     L++
Sbjct: 51  HGTTIVAVTFPGGVIMAGDRRATQGNLIATRDVDKVHHADEYSAV-GYAGTAGVGADLIK 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE Y      +    AK  R+   +++   M L     + L      D       
Sbjct: 110 LFQVELEHYEKIEGDTLSLDAKANRLGFMVKSNLPMALQGLAVVPLFAGYDLDRGVGRIF 169

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                     E G  +IGSG  +A SA +       S E   R
Sbjct: 170 SYDIAAARSEEQGFHSIGSGSVFAKSALKKTWRADLSEEHAVR 212


>gi|320583811|gb|EFW98024.1| proteasome component Pup1, putative [Pichia angusta DL-1]
          Length = 267

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 12/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  + +  VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGCKFNDGVVIAADTRATAGPIVADKNCEKLHRLAPRIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           ++  LE +   L R     +        + KY  ++ A +++A  D     + +      
Sbjct: 88  VQSNLELHSMSLNREPRVSSALQMLKQHLFKYQGHIGAYLIVAGVDPKGAHLFSIHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLET 184
                  ++GSG   A++          + EE A K  A +I A I   + +  N+ L  
Sbjct: 148 TDIGFYQSLGSGSLAAMAVLERDWKEDLTKEE-AMKLCADAIEAGIWNDLGSGSNVDLCV 206

Query: 185 LKVGDE 190
           ++VG +
Sbjct: 207 MEVGKD 212


>gi|225705098|gb|ACO08395.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
          Length = 278

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 14/183 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 44  GTTIAGIVFKDGVILGADARATDDMVVADKNCMKIHYIAPNIYCCG-AGVAADAEVTTQM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +   +E +     R  + +    ++ + L   +  I         D T   + +      
Sbjct: 103 MSSNVELHSLSTGRPPLVVTVTRQLKQMLFRYQGHIGSSLIVGGVDVTGVHLYSVYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S              A+++ R A  IAA I   + +  N+ L 
Sbjct: 163 YDKLPFLTMGSGAGAAISIFEDRYRPNMELEEAKKLVRDA--IAAGIFCDLGSGSNVDLC 220

Query: 184 TLK 186
            + 
Sbjct: 221 VIT 223


>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex [Candidatus Methanoregula boonei
           6A8]
 gi|302595832|sp|A7I841|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
          Length = 213

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 14/189 (7%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            M  TT + +   G V++A + + ++G  +    A+KV ++         AG   DA  L
Sbjct: 8   SMTGTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIG-MTIAGGVGDAQQL 66

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGM 124
              +  +   Y  +  R     A    +  YL                 D     V +  
Sbjct: 67  ARIITVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYVQLLVGGIDDHGPSVYSVD 126

Query: 125 --GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
             G   + E+ +++ GSG   A                A E+A +A+  A      +   
Sbjct: 127 AMGGATKEED-IVSTGSGSPMAYGVLEDRYRPGMNEDEAVELAVRALRSAMKRDAGSGEG 185

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 186 IHVVVITKD 194


>gi|116181580|ref|XP_001220639.1| proteasome subunit beta type 7 precursor [Chaetomium globosum CBS
           148.51]
 gi|88185715|gb|EAQ93183.1| proteasome subunit beta type 7 precursor [Chaetomium globosum CBS
           148.51]
          Length = 272

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIYDGGVVIAADTRATSGPIVADKNCEKLHYIAPNIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R +  +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKARVVTCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S          + +E  +  A +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKASLTQDEAVKLCADAIEAGIWNDLGSGSNVDVAII 207

Query: 186 KVG 188
              
Sbjct: 208 TGE 210


>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [uncultured methanogenic archaeon
           RC-I]
 gi|121685330|sp|Q0W2D6|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [uncultured methanogenic archaeon
           RC-I]
          Length = 208

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 70/197 (35%), Gaps = 16/197 (8%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +M DK    +   TT + +  D  VV+A + + ++G  +   +A+K+ R+         A
Sbjct: 1   MMEDK----QYKGTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDN-AAMTIA 55

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIADK 115
           GS  D   L   L+ + + +  +   S    A    +   L         ++ +I   DK
Sbjct: 56  GSVGDGQRLARILQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQVLIGGLDK 115

Query: 116 TITLVITGMGDVLE-PENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAAD 171
               + +         E   ++ GSG   A            S E   E+A +A+  A  
Sbjct: 116 AGPKIYSLDPLGGRIEEEKFVSTGSGSPIAYGVLEDRYKPGMSVEEGVELAARALESAMK 175

Query: 172 ICVYTNHNIVLETLKVG 188
               + + +    +   
Sbjct: 176 RDSASGNGMQFCVITAE 192


>gi|225705298|gb|ACO08495.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
          Length = 278

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 14/183 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 44  GTTIAGIVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCG-AGVAADAEVTTQM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +   +  +     R  + +    ++ + L   +  I         D T   + +      
Sbjct: 103 MSSNVGLHSLSTGRPPLVVTVTRQLKQMLFRYQGHIGSSLIVGGVDVTGAHLYSVYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S              A+++ R A  IAA I   + +  N+ L 
Sbjct: 163 YDKLPFLTMGSGAGAAISIFEDRYRPNMELEEAKKLVRDA--IAAGIFCDLGSGSNVDLC 220

Query: 184 TLK 186
            + 
Sbjct: 221 VIT 223


>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
           crenarchaeote HF4000_APKG8G15]
          Length = 210

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 11/186 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT + ++    VV+  D + S G  +   N  K++++     +   AG  ADA  L 
Sbjct: 10  LHGTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGL-TLAGGVADAQNLT 68

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
           + L      +  Q   +    +                 IA       D+    +     
Sbjct: 69  DILRYHANIHAVQKNENIPIRSLARLCSLVFHQNRGYPFIADILLGGYDQDGPQLFNIDM 128

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                +   +  GSG   A            + E+   IA +A+  A    + T   I +
Sbjct: 129 FGSVEKKSYVTTGSGSPVAYGVLEDEYRDDLTLEDAKGIALRAVKAAIVRNIGTGDGINI 188

Query: 183 ETLKVG 188
             +   
Sbjct: 189 AAIDKN 194


>gi|257056206|ref|YP_003134038.1| proteasome endopeptidase complex, beta component [Saccharomonospora
           viridis DSM 43017]
 gi|302595783|sp|C7MWV7|PSB_SACVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|256586078|gb|ACU97211.1| proteasome endopeptidase complex, beta component [Saccharomonospora
           viridis DSM 43017]
          Length = 289

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 69/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+    +G V+IAGD + + G T+   +  KV      + + G AG++  A  L+ 
Sbjct: 58  HGTTIVASTFNGGVLIAGDRRATTGNTIASRDLEKVYVTDAYSAV-GIAGTAGIALELVR 116

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +L  Y      S     K  ++   ++      L     + L +            
Sbjct: 117 LYTVELAHYEKIEGVSLSLDGKANKLANMVKGNLDGALAGLAVLPLFVGYDIDADDPKRA 176

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
                    G   E   G  AIGSG  YA S+ + L   +  A+   R   +A+  AAD 
Sbjct: 177 GRIVSFDVTGGRYEENAGYHAIGSGAVYAKSSLKKLYDPEADADTAVRTAIEALYDAADD 236

Query: 173 CVYTNH 178
              T  
Sbjct: 237 DTATGG 242


>gi|168019760|ref|XP_001762412.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686490|gb|EDQ72879.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 237

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 74/209 (35%), Gaps = 25/209 (11%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           +G        +  T + +      VIA D ++S G +++  +  K+  + +  ++A  +G
Sbjct: 18  VGASWSPYDNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHHITEKCVLA-SSG 76

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DK 115
             AD  +L + L+ + + Y +Q  +     A    +   L         +        ++
Sbjct: 77  FQADVRSLQKNLDARHQIYQHQHSKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNE 136

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAE 159
               V T         +G  + GSG +  +      +                 T++ A 
Sbjct: 137 GKGCVYTYDAVGSYERSGYSSQGSGQTLIMPVLDNQLKSASPLVLPPRESSTPLTESEAV 196

Query: 160 EIARKAMSIAADICVYTNHNIVLETLKVG 188
           ++ +   + AA+  +YT   + +  +   
Sbjct: 197 DLIKDTFASAAERDIYTGDGVEIVIINKE 225


>gi|71022905|ref|XP_761682.1| hypothetical protein UM05535.1 [Ustilago maydis 521]
 gi|46101159|gb|EAK86392.1| hypothetical protein UM05535.1 [Ustilago maydis 521]
          Length = 249

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+       VV+  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 44  GTTIVGCIFKDGVVLGADTRATEGPIVADKNCEKIHYISDNIRCCG-AGTAADTEFVTQL 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   ++ +     R    +     + + L   +  I  A      D T   + T      
Sbjct: 103 ISSNMQLHELNTGRQPRVVTAMTMLKQRLFQYQGHIGAALVLGGYDATGPHLFTVAPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS-AEEIARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A++   +        A+ I   A +I++ I   + +  N+ +  +
Sbjct: 163 TDKLPYVTMGSGSLAAMAVFESGWVKDMERADAIGLVAAAISSGIFNDLGSGSNVDVCVI 222

Query: 186 KVG 188
           + G
Sbjct: 223 EKG 225


>gi|269860673|ref|XP_002650056.1| 20S proteasome core particle subunit beta 5 [Enterocytozoon
           bieneusi H348]
 gi|220066543|gb|EED44021.1| 20S proteasome core particle subunit beta 5 [Enterocytozoon
           bieneusi H348]
          Length = 233

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 63/178 (35%), Gaps = 10/178 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       ++IA D + + G  +      KV  + K  ++   AG +AD     +
Sbjct: 33  HGTTTLAFVFKEGMIIAVDSRATAGSYIASQTVNKVIEINKY-LLGTMAGCAADCLYWEK 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDV 127
           ++    ++Y  +  +        + +   +   +        ++        +       
Sbjct: 92  KMGFYAKEYEIKTGKKITASQASYYLSNCINKYKGYGMSMGTMVCGYDKEPKIYMVDDQG 151

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
              EN + ++GSG + A     +  S   + EE   + + A+  A     Y+   + +
Sbjct: 152 RRIENNIFSVGSGSTIAYGVLSSRYSYDLTKEEAIQLGKDAIYAAGHRDAYSGGTVNV 209


>gi|315506171|ref|YP_004085058.1| 20S proteasome a and b subunits [Micromonospora sp. L5]
 gi|315412790|gb|ADU10907.1| 20S proteasome A and B subunits [Micromonospora sp. L5]
          Length = 279

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 69/188 (36%), Gaps = 21/188 (11%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  HATTI+ +   G VV+AGD + ++G  + + +  KV      + + G AG++     
Sbjct: 49  MAPHATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHPADAYS-LVGIAGTAGIGIE 107

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL-- 128
           L+   + +LE Y            K  R+   +R      +     I L           
Sbjct: 108 LMRLFQVELEHYEKIEGAMLSLDGKANRLASMIRGNLGAAMQGLAVIPLFAGFDLAASDP 167

Query: 129 ---------------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
                            E G  AIGSG  +A SA +       S   A  +A +A+  AA
Sbjct: 168 QRAGRIFSFDVTGGPYEETGYDAIGSGSLFAKSALKKRFRAGLSVQDATRLAVEALYDAA 227

Query: 171 DICVYTNH 178
           D    T  
Sbjct: 228 DDDTATGG 235


>gi|296139866|ref|YP_003647109.1| 20S proteasome A and subunit betas [Tsukamurella paurometabola DSM
           20162]
 gi|296028000|gb|ADG78770.1| 20S proteasome A and B subunits [Tsukamurella paurometabola DSM
           20162]
          Length = 273

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++ DG V+IAGD + ++G  + + +  K         + G AG++  A  +++
Sbjct: 46  HGTTIVAIKFDGGVLIAGDRRATMGHLIAQRDITKTFVTDDLTAV-GIAGTAGIAKQIVK 104

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
               +LE Y            K  R+   +R+     L     + L++            
Sbjct: 105 LFTVELEHYEKIEGVPLTFDGKANRLGGMVRSNFGAALQGLVAVPLLVGFDDADARGRIV 164

Query: 126 -----DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTN 177
                     E    +IGSG ++A S+ +        A+   ++A +A+  AAD    T 
Sbjct: 165 SYDVTGDWHDEVDYHSIGSGSAWAKSSIKKRFRHGLDADGALDVAAEALFDAADDDTATG 224

Query: 178 H 178
            
Sbjct: 225 G 225


>gi|255083098|ref|XP_002504535.1| predicted protein [Micromonas sp. RCC299]
 gi|226519803|gb|ACO65793.1| predicted protein [Micromonas sp. RCC299]
          Length = 298

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 70/199 (35%), Gaps = 14/199 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M   G K  A     TTI  V   G VV+  D + + G+TV   N  K+  +       G
Sbjct: 34  MSQNGLKFKAAMKTGTTITGVCFKGGVVLGADTRSTNGETVADKNCEKIHYIAPNIYCCG 93

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIAD 114
            AG++AD   +   +   LE +     R S  +     +  +L   +        +   D
Sbjct: 94  -AGTAADTEAVTGMIASALELHRLATKRKSRVVTALTMLKSHLFKYQGHVGAALVLGGVD 152

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                + +              +GSG   A++   A      +   A+EI  +++   A 
Sbjct: 153 INGPHLFSVHPHGSSDSLPFATMGSGSLAAMAVFEADFKEDMTEEEAKEIVARSIR--AG 210

Query: 172 I--CVYTNHNIVLETLKVG 188
           I   + +  N+ L  +   
Sbjct: 211 IFNDLGSGSNVDLCVITAD 229


>gi|219851431|ref|YP_002465863.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
           palustris E1-9c]
 gi|302595895|sp|B8GG66|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
           palustris E1-9c]
          Length = 211

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 14/188 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     +++A + + ++G  +    A+KV ++     +    G   DA  L 
Sbjct: 7   LKGTTTIGIVFKDGIILATEKRATMGSMIASKRAKKVYQVADRIGMTTAGG-VGDAQQLA 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGM- 124
             +  +   Y  +  RS    A    +  YL                 D T   V +   
Sbjct: 66  RIMSVECNLYQIRRGRSISVGASSTLLSNYLNQNRGYPYYVQLLVGGVDATGPSVYSVDA 125

Query: 125 -GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
            G      + ++A GSG   A            +   A E+A +A+  A      +   I
Sbjct: 126 MGGATRESD-IVATGSGSPMAYGVLEDRYKKDLTEDEAIELAIRALRAAMRRDSASGEGI 184

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 185 HVVIITKD 192


>gi|224067752|ref|XP_002302536.1| predicted protein [Populus trichocarpa]
 gi|118484887|gb|ABK94310.1| unknown [Populus trichocarpa]
 gi|222844262|gb|EEE81809.1| predicted protein [Populus trichocarpa]
          Length = 223

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 64/212 (30%), Gaps = 25/212 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M     +      +  T + +      V+A D ++S G  ++  +  K+ +L     +  
Sbjct: 1   MTKQQARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKIYKLAD-KCLMA 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +G  AD   L + L  K   Y +Q  +     A    +   L                 
Sbjct: 60  SSGFQADVRALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGF 119

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
            ++    V T        + G  A GSG    +      +                 ++ 
Sbjct: 120 DEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPAQDAVTPLSEA 179

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            A ++ +   + A +  +YT   + +  L   
Sbjct: 180 EAIDVVKDVFASATERDIYTGDKLEIVILNAD 211


>gi|322495629|emb|CBZ30934.1| putative proteasome beta 2 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 254

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 12/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+  D + + G  V     RK+  +    +  G AG+SAD   +   
Sbjct: 29  GTTIVGVVYKDGVVLGADTRATEGSIVADKCCRKIHYMAPNIMCCG-AGTSADTEAVTNM 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   L  +  +  + S  L     + ++L   +        +   D     + T      
Sbjct: 88  VSSHLALHRFETGKQSRVLEALTLLKRHLYRYQGHVSAALVLGGVDVEGPFLATVAPHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA--DI--CVYTNHNIVLET 184
                 + +GSG   A++   A      + EE A++ ++ A    I    Y+   + +  
Sbjct: 148 TDRLPFVTMGSGSIAAMAQLEAAYKDNMTCEE-AKELVTSAIRKGIFNDPYSGTQVDVCV 206

Query: 185 LKV 187
           +  
Sbjct: 207 ITK 209


>gi|256832436|ref|YP_003161163.1| 20S proteasome A and B subunits [Jonesia denitrificans DSM 20603]
 gi|302595738|sp|C7R403|PSB_JONDD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|256685967|gb|ACV08860.1| 20S proteasome A and B subunits [Jonesia denitrificans DSM 20603]
          Length = 302

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 18/171 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +     ++IAGD + ++G T+      KV    + + IA  AG++  A  L+ 
Sbjct: 49  HGTTIVALEYHNGIIIAGDRRATMGTTIAHREIEKVFAADEHSAIA-IAGTAGLAIELVR 107

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
             + +LE Y            K  R+   LR+   + L     + +              
Sbjct: 108 LFQLELEHYEKIEGTPLSLDGKANRLSTMLRSHLHLALQGLPIVPIFAGWDSTRHQGRLF 167

Query: 126 -----DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
                     E      GSG  +A SA + L   Q  A     +A++IA +
Sbjct: 168 AYDVTGGRYEEPNFTCAGSGSVFARSALKKLWKPQLDA----TRAITIALE 214


>gi|156030953|ref|XP_001584802.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154700648|gb|EDO00387.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 274

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    +G VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFEGGVVIAADTRATSGPIVADKNCEKLHYIAPQIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTMLKQHLFRYQGHIGAYLVVAGVDPTGVGLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S       ++ + +E     + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKSKMTEDEAVELASNAIQAGIFNDLGSGSNVDVAII 207

Query: 186 KVG 188
              
Sbjct: 208 TKD 210


>gi|296394010|ref|YP_003658894.1| 20S proteasome subunits AB [Segniliparus rotundus DSM 44985]
 gi|296181157|gb|ADG98063.1| 20S proteasome A and B subunits [Segniliparus rotundus DSM 44985]
          Length = 275

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 71/182 (39%), Gaps = 20/182 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +   G V+IAGD + + G  +     +KV    + +  AG AG+ A AF L+ 
Sbjct: 51  HATTIVALTYAGGVLIAGDRRATSGNLISHDEMQKVYLTDEYSA-AGIAGTVAIAFELVR 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y      +     K  R+   +R      +     + L+I            
Sbjct: 110 LFTVELEHYEKVEGVALTFSGKANRLAAMVRGNLDAAMQGLAAVPLLIGLDPQDPEPKGR 169

Query: 125 -------GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
                  G   E  +G   IGSGG +A S  + L         A   A +A++ A +   
Sbjct: 170 IVSYDAAGGRFEESSGYHCIGSGGLFARSTLKRLHDPDADRATALRSAVEALADAGEADS 229

Query: 175 YT 176
            T
Sbjct: 230 AT 231


>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
 gi|302595692|sp|A8AA46|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
          Length = 198

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 10/180 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + ++    VV+A + ++S G  +M   ARKV ++G    +A  AG  AD   +   
Sbjct: 5   GATAVGIKVKDGVVLAAERRMSYGGFIMSKAARKVFKVGDRMGMAC-AGLYADMQAIARA 63

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           LE ++  Y     R     +    +   L + +   L+             +        
Sbjct: 64  LENEIRYYEISNKRKMKVRSAARLLGLILYSNKLFPLMTETVFGGYDDEPRIFVLDPVGS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             E    A+G+G   A++          S EE   +A +++ +A+     +   I +  +
Sbjct: 124 VIEEKYSAVGTGAPLAMALLDKEYREDMSLEEAQNLAIESVKVASGRDSLSGDGIDVLVI 183


>gi|323307196|gb|EGA60479.1| Pup1p [Saccharomyces cerevisiae FostersO]
          Length = 261

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +  VVIA D + + G  V   N  K+ R+      AG AG++AD   + + 
Sbjct: 29  GTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAG-AGTAADTEAVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   +E +     R    ++        + KY  ++ A +++A  D T + + +      
Sbjct: 88  IGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
                 +++GSG   A++   +      + EE  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           ++G +
Sbjct: 208 EIGKD 212


>gi|322786101|gb|EFZ12710.1| hypothetical protein SINV_07161 [Solenopsis invicta]
          Length = 277

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     V++ GD + +    V    + K+  L       G AG++AD     E 
Sbjct: 39  GTTIAGVIYKDGVILGGDTRATEDTIVADKYSLKIHFLAPNMYCCG-AGTAADTEMTTEM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R       +  + + L   +  I  A      D     +        
Sbjct: 98  ISSQLELHRLNTGRIVPVCTANTLIKQMLFRYQGHIGAALILGGFDLDGPQLYCIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
             +     +GSG   A++   +          A+ +   A+       + +  N+ L  +
Sbjct: 158 SEKQKYTTMGSGSLAAMAVFESRWRPDLEEEDAKRLVADAIRAGVFNDLASGSNVDLCII 217

Query: 186 KVG 188
           +  
Sbjct: 218 RKN 220


>gi|19173511|ref|NP_597314.1| 20S PROTEASOME BETA-TYPE SUBUNIT COMPONENT PRE2 [Encephalitozoon
           cuniculi GB-M1]
 gi|19171100|emb|CAD26490.1| 20S PROTEASOME BETA-TYPE SUBUNIT COMPONENT PRE2 [Encephalitozoon
           cuniculi GB-M1]
          Length = 229

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 58/180 (32%), Gaps = 11/180 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT L       +VIA D + + G  +      KV  +   N++   AG +AD     
Sbjct: 29  YHGTTTLAFIFKEGMVIAVDSRATSGSYIASQTVNKVINI-NKNLLGTMAGGAADCLFWE 87

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             +    + Y     R     A    +   +   +   L         D +   +     
Sbjct: 88  NLMGLYAKNYELTNGRRITVAAASMYLSNCVYRYKGYGLSMGTMICGYDSSGPSIYYVDD 147

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           D       + ++GSG + A     +        +E   + R A+  AA    ++   I L
Sbjct: 148 DGKRVSGSLFSVGSGSTIAYGILSSSYRFDMDKDEALNLGRDAIFHAAHRDAFSGGLINL 207


>gi|254567792|ref|XP_002491006.1| Endopeptidase with trypsin-like activity that cleaves after basic
           residues [Pichia pastoris GS115]
 gi|238030803|emb|CAY68726.1| Endopeptidase with trypsin-like activity that cleaves after basic
           residues [Pichia pastoris GS115]
 gi|328352462|emb|CCA38861.1| 20S proteasome subunit beta 2 [Pichia pastoris CBS 7435]
          Length = 265

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +G VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGVKFEGGVVIAADTRATSGPIVADKNCEKLHRLSPTIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    +         + KY  ++ A +++   D T   + +      
Sbjct: 88  IGSNLELHAMSTERKPRVVTALTMLKQHLFKYQGHIGAYLIVGGVDPTGAHLFSIHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  ++GSG   A++   +      + EE   +  +A+   A I   + +  N+ L 
Sbjct: 148 TDIGFYQSLGSGSLAAMAVLESNWKEGLTKEEAMKLCTEAIE--AGIWNDLGSGSNVDLC 205

Query: 184 TLKVGDE 190
            ++VG +
Sbjct: 206 VMEVGKD 212


>gi|296812899|ref|XP_002846787.1| proteasome component PUP1 [Arthroderma otae CBS 113480]
 gi|238842043|gb|EEQ31705.1| proteasome component PUP1 [Arthroderma otae CBS 113480]
          Length = 275

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R+         + ++L   +  I         D T T + T      
Sbjct: 88  ISSNIELHSLSTGRAPRVATCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   ++     + EE  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPSLTKEEAIKLTSDAIQAGIWNDLGSGSNVDVCVM 207

Query: 186 KVG 188
           +  
Sbjct: 208 EKD 210


>gi|151945775|gb|EDN64016.1| putative proteasome subunit [Saccharomyces cerevisiae YJM789]
 gi|190407475|gb|EDV10742.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
 gi|207341103|gb|EDZ69250.1| YOR157Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272796|gb|EEU07767.1| Pup1p [Saccharomyces cerevisiae JAY291]
 gi|259149640|emb|CAY86444.1| Pup1p [Saccharomyces cerevisiae EC1118]
 gi|323302911|gb|EGA56715.1| Pup1p [Saccharomyces cerevisiae FostersB]
 gi|323331511|gb|EGA72926.1| Pup1p [Saccharomyces cerevisiae AWRI796]
 gi|323335547|gb|EGA76832.1| Pup1p [Saccharomyces cerevisiae Vin13]
 gi|323346562|gb|EGA80849.1| Pup1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352117|gb|EGA84654.1| Pup1p [Saccharomyces cerevisiae VL3]
          Length = 261

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +  VVIA D + + G  V   N  K+ R+      AG AG++AD   + + 
Sbjct: 29  GTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAG-AGTAADTEAVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   +E +     R    ++        + KY  ++ A +++A  D T + + +      
Sbjct: 88  IGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
                 +++GSG   A++   +      + EE  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           ++G +
Sbjct: 208 EIGKD 212


>gi|224140867|ref|XP_002323800.1| predicted protein [Populus trichocarpa]
 gi|118484467|gb|ABK94109.1| unknown [Populus trichocarpa]
 gi|222866802|gb|EEF03933.1| predicted protein [Populus trichocarpa]
          Length = 274

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 10/190 (5%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
             +   TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD  
Sbjct: 34  PFRKTGTTIVGLVFQDGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCG-AGTAADTE 92

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITG 123
            + + +  +L+ +     R S  +     + K+L N +        +   D T   + T 
Sbjct: 93  AVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGHVSAALVLGGVDCTGPHLHTI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
                        +GSG   A++   +      S +E   +  +A+       + +  N+
Sbjct: 153 YPHGSTDTLPFATMGSGSLAAMAVFESKYKEGLSRDEGIKLVSEAVCSGIFNDLGSGSNV 212

Query: 181 VLETLKVGDE 190
            +  +  G +
Sbjct: 213 DVCVITKGHK 222


>gi|115462469|ref|NP_001054834.1| Os05g0187000 [Oryza sativa Japonica Group]
 gi|8671504|dbj|BAA96835.1| beta 2 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|46275847|gb|AAS86397.1| 20S proteasome beta subunit [Oryza sativa Japonica Group]
 gi|113578385|dbj|BAF16748.1| Os05g0187000 [Oryza sativa Japonica Group]
 gi|125551108|gb|EAY96817.1| hypothetical protein OsI_18743 [Oryza sativa Indica Group]
 gi|215736977|dbj|BAG95906.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630450|gb|EEE62582.1| hypothetical protein OsJ_17385 [Oryza sativa Japonica Group]
          Length = 272

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 38  GTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     +  +L + +        +   D T   + T      
Sbjct: 97  VSSQLQLHRYATGRESRVVTSLTLLKSHLFSYQGHVSAALVLGGVDVTGPHLHTVYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +      + EE   +  +A+     I   + +  N+ + 
Sbjct: 157 TDTLPFATMGSGSLAAMSVFESKYKEGLTREEGIQLVAEAIR--GGIFNDLGSGSNVDVC 214

Query: 184 TLKVG 188
            +  G
Sbjct: 215 VITKG 219


>gi|6324731|ref|NP_014800.1| Pup1p [Saccharomyces cerevisiae S288c]
 gi|130879|sp|P25043|PSB7_YEAST RecName: Full=Proteasome component PUP1; AltName: Full=Macropain
           subunit PUP1; AltName: Full=Multicatalytic endopeptidase
           complex subunit PUP1; AltName: Full=Proteinase YSCE
           subunit PUP1; Flags: Precursor
 gi|323462943|pdb|3NZJ|H Chain H, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462957|pdb|3NZJ|V Chain V, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462971|pdb|3NZW|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462985|pdb|3NZW|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462999|pdb|3NZX|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463013|pdb|3NZX|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|4250|emb|CAA43492.1| PUP1 [Saccharomyces cerevisiae]
 gi|1293717|gb|AAC49643.1| Pup1p [Saccharomyces cerevisiae]
 gi|1420391|emb|CAA99363.1| PUP1 [Saccharomyces cerevisiae]
 gi|285815037|tpg|DAA10930.1| TPA: Pup1p [Saccharomyces cerevisiae S288c]
          Length = 261

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +  VVIA D + + G  V   N  K+ R+      AG AG++AD   + + 
Sbjct: 29  GTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAG-AGTAADTEAVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   +E +     R    ++        + KY  ++ A +++A  D T + + +      
Sbjct: 88  IGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
                 +++GSG   A++   +      + EE  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           ++G +
Sbjct: 208 EIGKD 212


>gi|322692812|gb|EFY84700.1| proteasome component PRE2 precursor [Metarhizium acridum CQMa 102]
          Length = 288

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 59/196 (30%), Gaps = 42/196 (21%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            +    +K+ H TT L  R  G +++A D + + G  +     +                
Sbjct: 91  SNPDCPIKIAHGTTTLAFRFQGGIIVATDSRATAGNWIASQTVK---------------- 134

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
                         K   +  +  R     A    +   + + + M L           +
Sbjct: 135 --------------KCRLHELRHKRRISVAAASKILANLVYSYKGMGLSMGTMCAGVTKE 180

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     D       +  +GSG ++A     A  +   S   A E+ R+++  A   
Sbjct: 181 EGPALYYVDSDGTRLAGNLFCVGSGQTFAYGVLDAEYNYDLSVEDALELGRRSILAATHR 240

Query: 173 CVYTNHNIVLETLKVG 188
             Y+   I L  +K  
Sbjct: 241 DAYSGGFINLYHVKEE 256


>gi|154345087|ref|XP_001568485.1| proteasome beta 2 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134065822|emb|CAM43599.1| putative proteasome beta 2 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 254

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 66/184 (35%), Gaps = 12/184 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+  D + + G  V   + RK+  +    +  G AG+SAD   +   
Sbjct: 29  GTTIVGVVYQDGVVLGADTRATEGSIVADKHCRKIHYMAPNIMCCG-AGTSADTEAVTNM 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   L  +  +  + S  L     + ++L   +        +   D     + T      
Sbjct: 88  VSSHLALHRLETGKQSRVLEALTLLKRHLYRYQGHVSAALVLGGVDVEGPFLATIAPHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA--DI--CVYTNHNIVLET 184
                 + +GSG   A++          + EE A++ ++ A    I    Y+   + +  
Sbjct: 148 TDRLPFVTMGSGSIAAMAQMETAYKDNMTCEE-AKELVASAIRKGIFNDPYSGTQVDVCV 206

Query: 185 LKVG 188
           +   
Sbjct: 207 ITKD 210


>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 231

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +         +  T L +  D   VIAGD + S G ++    A KV  +  G ++A  
Sbjct: 14  VPIEHAFSPYTDNGGTTLAIAGDDFCVIAGDTRQSEGYSINTRYAPKVHEMRNGTVLAT- 72

Query: 62  AGSSADAFTLLERLEKKLE--QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD----- 114
            G  AD+ TL++R++++LE  Q+ +    S+  +A+      Y +               
Sbjct: 73  GGMFADSQTLMKRIQQRLEWYQFQHDKNMSAPAMAQMLSTILYYKRFFPYFSWCSVGGLD 132

Query: 115 -KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNS-----------AEEI 161
                 V T               GS G          +     S            + I
Sbjct: 133 EHGKGCVYTYDPVGNYERVSWDCGGSAGKLIQPFLDNQIGKHHMSGASKSLPSLETVKRI 192

Query: 162 ARKAMSIAADICVYTNHNIVLETLKVG 188
            + A + A +  +YT   + +  +   
Sbjct: 193 VKDAFTSATERDIYTGDFLEIFVITKD 219


>gi|260903697|ref|ZP_05912019.1| putative 20S proteasome beta-subunit precursor [Brevibacterium
           linens BL2]
          Length = 266

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 17/180 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  R    +++AGD + ++G  +   +  KVR     ++I G AG++  A  L+  
Sbjct: 43  GTTIICFRTAAGILMAGDRRATIGSMIASHSMEKVRPADDFSVI-GIAGTAGLALDLIRL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM---------- 124
            + +LE Y            K  R+   LR   ++ +     + L               
Sbjct: 102 YQLELEHYEKIEGARLSLAGKANRLASMLRGNLSLAMQGLSVVPLFAGVDEATPAGQIFS 161

Query: 125 ---GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
                    E+   +IGSG  YA  A + L         A  +A +A+  A+D    T  
Sbjct: 162 FDVTGGKYEEHRFHSIGSGSGYARGALKKLWQPGLEFDAAISVAVEALFDASDDDSATGG 221


>gi|226471394|emb|CAX70778.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
           japonicum]
          Length = 205

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 54/149 (36%), Gaps = 7/149 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V + N  K+ R+       G AG++AD   +   
Sbjct: 38  GTTICGVVFKNGIVLGADTRATEGNIVAEKNCSKIHRIADNIYCCG-AGTAADTQMVTLM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  ++E +     R+   +A    + +YL   +        +   D T   + +      
Sbjct: 97  ISSQVELHRLNTGRTPRVIAPLRLLKRYLYQYQGYVGAALVLGGVDSTGPHLFSIAPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS 157
             +   + +GSG    +S   +       
Sbjct: 157 TDKLPYITMGSGSLACMSVLESRFKFNME 185


>gi|116670723|ref|YP_831656.1| proteasome subunit beta [Arthrobacter sp. FB24]
 gi|302595820|sp|A0JWY6|PSB_ARTS2 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|116610832|gb|ABK03556.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01B [Arthrobacter sp. FB24]
          Length = 275

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 73/191 (38%), Gaps = 18/191 (9%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G     +++ HATTI+++   G V++AGD + ++G  +   +  KV      +++ G AG
Sbjct: 41  GAGSQPLQVPHATTIVSLTYGGGVLMAGDRRATMGNVIASRHIEKVFPADSYSVL-GIAG 99

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           ++  A  L    + +LE Y            K  R+   +R    M +     + L    
Sbjct: 100 TAGIAIDLTRLFQVELEHYEKIEGTLLSLEGKANRLGAMIRGNLPMAMQGLAVVPLFAGF 159

Query: 124 MG-------------DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
                               E    A+GSG  +A  A + L     +   A  +A +++ 
Sbjct: 160 DLPVGIGRLFSYDVTGGRYEEKEHHAVGSGSVFARGALKKLWRPGLTAEEAVAVAVESLY 219

Query: 168 IAADICVYTNH 178
            AAD    T  
Sbjct: 220 DAADDDSATGG 230


>gi|226533094|ref|NP_001147213.1| proteasome subunit beta type 1 [Zea mays]
 gi|195608582|gb|ACG26121.1| proteasome subunit beta type 1 [Zea mays]
          Length = 219

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 67/203 (33%), Gaps = 25/203 (12%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +    + +  T L V      V+A D ++S+G +++  +  K+ +L    ++A  +G   
Sbjct: 3   RFNPYENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLA-SSGFQG 61

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D   L + L  K   Y +   +     A    +   L         A   +  +      
Sbjct: 62  DIKALQKALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKG 121

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIA 162
              T          G  A G+G +  +      +                 +++ A ++ 
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDAVTPLSESDAVDLV 181

Query: 163 RKAMSIAADICVYTNHNIVLETL 185
           +   + A +  +YT   + +  +
Sbjct: 182 KDVFASATERDIYTGDRLEIVVI 204


>gi|121710184|ref|XP_001272708.1| proteasome component Pup1, putative [Aspergillus clavatus NRRL 1]
 gi|119400858|gb|EAW11282.1| proteasome component Pup1, putative [Aspergillus clavatus NRRL 1]
          Length = 272

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYIAPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNVELHALSTGRPPRVITCMTMLKQHLFRYQGHIGAYLVVAGVDPTGVGLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   ++     + EE +A  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPNLNREEAVALCSEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 END 210


>gi|242082111|ref|XP_002445824.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
 gi|241942174|gb|EES15319.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
          Length = 219

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 67/203 (33%), Gaps = 25/203 (12%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +    + +  T + V      V+A D ++S+G +++  +  K+ +L    ++A  +G   
Sbjct: 3   RFDPYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDHSKIAQLADKCVLA-SSGFQG 61

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D   L + L  K   Y +   +     A    +   L         A   +  +      
Sbjct: 62  DIKALQKALTAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKG 121

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIA 162
              T          G  A G+G +  +      +                 +++ A ++ 
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGSALMMPVLDNQLKSPSPLLLPARDAVTPLSESDAVDLV 181

Query: 163 RKAMSIAADICVYTNHNIVLETL 185
           +   + A +  +YT   + +  +
Sbjct: 182 KDVFASATERDIYTGDRLEIVVI 204


>gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
          Length = 243

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 9/182 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++ D  VV+A D + SLG  V   + +KV  +     +   AGS + A  L+  
Sbjct: 49  GTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGAL-TIAGSVSAAQNLIST 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-----LEAMILIADKTITLVITGMGDVLE 129
           L  +   Y  +  +     A        LR+     ++ ++   D     + +       
Sbjct: 108 LRAETSLYEARRGKDMSMEALSTLTGNLLRSGAFFVVQPILGGVDDEGAHIYSIDALGGT 167

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLK 186
            E      GSG  YAL           +   A+ IA KA+  A +  + + + I +  + 
Sbjct: 168 TEEEYTVTGSGSQYALGVLEQEYDDDVTIDEAKTIAAKAIQSAVERDLASGNGINVAVVT 227

Query: 187 VG 188
             
Sbjct: 228 DD 229


>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
 gi|302595716|sp|A8AB58|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
          Length = 212

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 10/195 (5%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +  D+  A  +  TT + +R +  VV+A D + + G  ++     K+ ++     +   A
Sbjct: 1   MSVDEKVARALKGTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKISDYMAMTT-A 59

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK------YLRNLEAMILIADKT 116
           G  ADA  L + L  +++ Y     +     A    +        +   +  +++    T
Sbjct: 60  GLVADAQVLADVLRMEVKNYELFHKKRMSVKAAATFLSNVLHSARFYPYIVQLLVGGFDT 119

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              + +        E   +  GSG   A+    A  +     EE   +A +A+  A    
Sbjct: 120 APRLYSLDWFGTVAEEEFLVTGSGSPMAVGVIEAEYNPNMDLEELVNLAVRAVFAATRRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +   I +  +   
Sbjct: 180 TASGEGIDVAVIDRN 194


>gi|225445670|ref|XP_002266488.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297736018|emb|CBI24056.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M   +    M  TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +G
Sbjct: 1   MDHLNQPHSM-GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLC-RSG 58

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKT 116
           S+AD+  L + +   L Q+  QL + +                   L+    +       
Sbjct: 59  SAADSQILSDYVRYYLHQHTIQLGQPATVKVAANLVRLISYNNKNMLQTGLIVGGWDKHE 118

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +          E      GSG SY             +   AE++  KA+S+A    
Sbjct: 119 GGKIYGVPLGGTILEQPFAIGGSGSSYLYGFFDQEWKEGMTKDEAEKLVVKAVSLAIARD 178

Query: 174 VYTNHNIVLETLKVG 188
             +   +   T+   
Sbjct: 179 GASGGVVRTVTINSE 193


>gi|171696250|ref|XP_001913049.1| hypothetical protein [Podospora anserina S mat+]
 gi|170948367|emb|CAP60531.1| unnamed protein product [Podospora anserina S mat+]
          Length = 274

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIYDGGVVIAADTRATSGPIVADKNCEKLHYISPNIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTVMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S        + + +E  +  A +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKAKLTQDEAVKLCADAIEAGIWNDLGSGSNVDVAII 207

Query: 186 KVG 188
              
Sbjct: 208 TPE 210


>gi|302867419|ref|YP_003836056.1| 20S proteasome subunit A/B [Micromonospora aurantiaca ATCC 27029]
 gi|302570278|gb|ADL46480.1| 20S proteasome A and B subunits [Micromonospora aurantiaca ATCC
           27029]
          Length = 266

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 69/188 (36%), Gaps = 21/188 (11%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  HATTI+ +   G VV+AGD + ++G  + + +  KV      + + G AG++     
Sbjct: 36  MAPHATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHPADAYS-LVGIAGTAGIGIE 94

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL-- 128
           L+   + +LE Y            K  R+   +R      +     I L           
Sbjct: 95  LMRLFQVELEHYEKIEGAMLSLDGKANRLASMIRGNLGAAMQGLAVIPLFAGFDLAASDP 154

Query: 129 ---------------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
                            E G  AIGSG  +A SA +       S   A  +A +A+  AA
Sbjct: 155 QRAGRIFSFDVTGGPYEETGYDAIGSGSLFAKSALKKRFRAGLSVQDATRLAVEALYDAA 214

Query: 171 DICVYTNH 178
           D    T  
Sbjct: 215 DDDTATGG 222


>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
           A3]
 gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
           voltae A3]
          Length = 215

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 16/198 (8%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +++    M  TT + +     VV+A D + ++G  +    A+K+  + +  I    AG
Sbjct: 1   MSEEYK--YMKGTTTVGIACADGVVLATDKRATMGNLIADKEAKKLYPIDEY-IAMTIAG 57

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------- 114
           S  DA +L+  +  + + Y  +   +   LA    M   L       L+           
Sbjct: 58  SVGDAQSLVRIISAETKIYKMRTGNNMSPLACTTLMSNVLHGNRHFPLMNQLIVGGYDVC 117

Query: 115 KTITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
                + +      +  E    + GSG   A     A    +     A ++A KA+S A 
Sbjct: 118 NDEPQLYSLDAVGGINEETTFTSTGSGSPTAYGVLEAEYVNKLKTSAALKLAVKAISSAM 177

Query: 171 DICVYTNHNIVLETLKVG 188
               Y+ + I L  +   
Sbjct: 178 KRDAYSGNGISLAKIDKN 195


>gi|41614998|ref|NP_963496.1| hypothetical protein NEQ203 [Nanoarchaeum equitans Kin4-M]
 gi|74579825|sp|Q74MP5|PSB_NANEQ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|40068722|gb|AAR39057.1| NEQ203 [Nanoarchaeum equitans Kin4-M]
          Length = 196

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 13/185 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ ++    VV+A D Q S+G  V    A+K+  +    ++AG +G+ AD   + + L
Sbjct: 2   TTIIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAG-SGTVADLQHIAKIL 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI--------LIADKTITLVITGMG-D 126
           + +L+       R+   +     +   L      +           +     + +  G  
Sbjct: 61  KTELKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAGPINSKEFGIYSLDGIG 120

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
            +       A GSGG  AL    A  +       A ++A KA+  +    V++ + I + 
Sbjct: 121 AISEIKDYFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSGYGIEIY 180

Query: 184 TLKVG 188
           T+   
Sbjct: 181 TITKK 185


>gi|307214019|gb|EFN89226.1| Proteasome subunit beta type-1 [Harpegnathos saltator]
          Length = 236

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                  +  +++ +  D   V+A D ++S G ++      K+  L K  I+ G +G   
Sbjct: 24  SFSPYADNGGSVVALAGDDFCVVAADTRLSTGFSIYTRQQDKLFPLSKTTIL-GCSGCWC 82

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTIT 118
           D  TL   L  +++ Y ++  +     A    +   L                       
Sbjct: 83  DTLTLTRLLSARMQMYKHEHQKEMSTPATAQMLSTMLYYKRFFPYYVSNILAGLDENGKG 142

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARA--LMS----------TQNSAEEIARKAM 166
            + +        +    A GS G+                       TQ  A  I +   
Sbjct: 143 CIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKNQEGITPVNLTQEKAVAILKDVF 202

Query: 167 SIAADICVYTNHNIVLETLKVG 188
           + AA+  +YT   I ++ +   
Sbjct: 203 TSAAERDIYTGDGITIKIITKD 224


>gi|17380206|sp|Q9IB83|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
           proteasome beta-6 subunit B; Short=B6-B
 gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
          Length = 237

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            K      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + +E +L+ Y +   +S    A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALKICIITKE 225


>gi|320593709|gb|EFX06118.1| proteasome component [Grosmannia clavigera kw1407]
          Length = 277

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 15/186 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISPQIWCAG-AGTAADTEFTTAI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTLLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADI--CVYTNHNIVL 182
             +   + +GSG   A+S        +    + A ++  +A+   A I   + +  N+ +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETKWKPEALTRDEAVKLCSEAIQ--AGIFNDLGSGSNVDV 205

Query: 183 ETLKVG 188
             +   
Sbjct: 206 CVITSE 211


>gi|157822847|ref|NP_001099502.1| proteasome subunit beta type-11 [Rattus norvegicus]
 gi|149063912|gb|EDM14182.1| rCG23402 [Rattus norvegicus]
          Length = 301

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           +     H TT L  R    V+ A D + S G  V    +RKV  + +  ++   +G+SAD
Sbjct: 42  YGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHRH-LLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L ++L     +  +          +   +     + L         D +   +
Sbjct: 101 CATWYRVLRRELRLRELREGQLPSVAGTAKLLSAMMSRYRGLDLCVATALCGWDHSGPAL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  V ++GSG  YA            +   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTCLQGDVFSVGSGSPYAYGVLDRSYHYDMTVQEAYTLARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|229367266|gb|ACQ58613.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
          Length = 237

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   ++    A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIARKA 165
               +         +   A GS  +         +             TQ+ A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRVCIITKE 225


>gi|297520978|ref|ZP_06939364.1| ATP-dependent protease peptidase subunit [Escherichia coli OP50]
          Length = 113

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 67/111 (60%), Positives = 88/111 (79%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI++VR++G VVIAGDGQ +LG TVMK N +KVRRL    +IAGFAG +ADAFTL E  
Sbjct: 2   TTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELF 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           E+KLE +   L++++VELAKDWR D+ LR LEA++ +AD+T +L+ITG GD
Sbjct: 62  ERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGD 112


>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
           DSM 10642]
 gi|302595823|sp|D3RX66|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
           placidus DSM 10642]
          Length = 210

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 66/188 (35%), Gaps = 12/188 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TT + +     VV+A + + ++G  +    A+K+ ++     +   AGS  DA  L 
Sbjct: 7   FKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTT-AGSVGDAQFLA 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDK------YLRNLEAMILIA-DKTITLVITGMG 125
             ++ +   Y  +        A    +        Y   L  +++   DKT   + +   
Sbjct: 66  RLIKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDKTGAKIYSIDP 125

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIV 181
                 E  ++A GSG   A              + A E+A +A+  A      +   I 
Sbjct: 126 IGGAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIRAIYSAMKRDSASGDGID 185

Query: 182 LETLKVGD 189
           +  +   +
Sbjct: 186 VVKITEKE 193


>gi|151301141|ref|NP_001093092.1| proteasome beta subunit [Bombyx mori]
 gi|95102764|gb|ABF51323.1| proteasome beta subunit [Bombyx mori]
          Length = 232

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  +I+ +  D   VI  D ++S G ++   + +K+ +L +  ++ G  G  
Sbjct: 19  HRFEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVL-GATGCW 77

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
            D  TL   L+ +++ Y ++  +S    A    +   L             +  + +   
Sbjct: 78  CDTLTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGK 137

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS--------------------AEEIARKA 165
             +   + +         A  +A A +                         A  + +  
Sbjct: 138 GCVYSYDPIGHCARHNFRAGGSAAAQLQPLLDNQIGLKNMQNVTEAPLPREKALALLKDV 197

Query: 166 MSIAADICVYTNHNIVLETLKV 187
              AA+  +YT  +I +  +  
Sbjct: 198 FISAAERDIYTGDSIYILIITA 219


>gi|50550679|ref|XP_502812.1| YALI0D14058p [Yarrowia lipolytica]
 gi|49648680|emb|CAG81000.1| YALI0D14058p [Yarrowia lipolytica]
          Length = 261

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  + DG VVIA D + + G  V   N  K+ R+      AG AG++AD   + + 
Sbjct: 29  GTTIVGCKFDGGVVIAADTRATSGDIVADKNCEKLHRIAPHIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
               +E +     R    +         + KY  ++ A +++A  D T   +++      
Sbjct: 88  TASNIELHSLSAGRQPRVVTCLTMLKQHLFKYQGHIGAYLIVAGVDPTGPQLMSIHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
                 +A+GSG   A++   A    + + EE   +A  A+       + +  N+ +  +
Sbjct: 148 TDVGYYLALGSGSMAAMAVLEANWKQELTKEEAIQLASDAIESGIWNDLGSGSNVDICVM 207

Query: 186 KVGDE 190
           + G +
Sbjct: 208 EQGKD 212


>gi|154297630|ref|XP_001549241.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150858483|gb|EDN33675.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 274

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    +G VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFEGGVVIAADTRATSGPIVADKNCEKLHYIAPQIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGVGLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S       ++ + +E  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKSKMTEDEAVQLASNAIQAGIFNDLGSGSNVDVAII 207

Query: 186 KVG 188
              
Sbjct: 208 TKD 210


>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
 gi|302595818|sp|D2RGT4|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
          Length = 215

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 67/188 (35%), Gaps = 14/188 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TT + +     VV+A + + ++G  +    A+K+ R+    +    AG+  DA  L 
Sbjct: 10  YKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIAD-RVAMTTAGAVGDAQFLA 68

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGM- 124
             +  +++ Y  +        A    +   L ++              DK    + +   
Sbjct: 69  RLISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFVQLLVGGVDKRGPSIYSIDL 128

Query: 125 -GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNI 180
            G  +E  + ++A GSG   A        + +   +   E+A +A+  A      +   I
Sbjct: 129 LGGAIEEID-IVATGSGSPTAYGVLEDRYTPEITVDDGVELAVRAIYSAMRRDSASGDGI 187

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 188 DVVKITKD 195


>gi|229367074|gb|ACQ58517.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
          Length = 237

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   ++    A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIARKA 165
               +         +   A GS  +         +             TQ+ A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRVCIITKE 225


>gi|326469518|gb|EGD93527.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
 gi|326478955|gb|EGE02965.1| proteasome component PUP1 [Trichophyton equinum CBS 127.97]
          Length = 275

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVANKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R+         + ++L   +  I         D T T + T      
Sbjct: 88  ISSNIELHSLSTGRAPRVATCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S   ++     +   A ++A +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPSLTKDEAIKLASEAIQ--AGIWNDLGSGSNVDVC 205

Query: 184 TLKVG 188
            ++  
Sbjct: 206 VMEKD 210


>gi|119193390|ref|XP_001247301.1| proteasome component [Coccidioides immitis RS]
          Length = 277

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPSIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   LE +     R    +     + ++L   +        +   D T   + T      
Sbjct: 88  ISSNLELHALSTGRKPRVITCMTLLKQHLFRYQGYVGAYLVVAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S    + +   + ++ IA  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWTPNLNKDQAIALASEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 EQD 210


>gi|212224577|ref|YP_002307813.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
 gi|302595811|sp|B6YXV3|PSB2_THEON RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|212009534|gb|ACJ16916.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
          Length = 200

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 59/178 (33%), Gaps = 11/178 (6%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           ++    +V+A D Q SLG  V   N RK+  +     I   AGS  D   L   LE +  
Sbjct: 13  IKAKDGIVLAADTQASLGHMVETLNIRKIIPITDRIAITT-AGSVGDVQALARMLEAEAR 71

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVLEPENGV 134
            Y     +     A    +   L   +         L        +           +  
Sbjct: 72  YYQFTWGKPMSTKAMANLLSNILNGNKWFPYLVQIILGGYVEEPTLANLDPLGGLIFDDY 131

Query: 135 MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH-NIVLETLKVG 188
            A GSG  +A++          S   A+E+A +A+  A    VYT    I +  +   
Sbjct: 132 TATGSGSPFAIAVLEDGYKKDMSIEEAKELAVRAVRTAGKRDVYTGSRKIQIVAITKE 189


>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
 gi|74567841|sp|Q6L181|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
          Length = 210

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 10/173 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +     V++  D + ++   +   NA+K+ ++         AG   DA  L+  
Sbjct: 7   GTTTVGITAGDYVIMGTDSRATMENFISNKNAQKLYQIDNY-AAMTIAGLVGDAQVLVRY 65

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYL------RNLEAMILIADKTITLVITGMGDVL 128
           ++ ++E Y  Q   S    A    +   L        +  +++    T   + +      
Sbjct: 66  MKAEMELYRVQRKVSMPIDAAATLLSNMLNQTKFYPYMVQLLVGGYDTKPHIFSIDAAGG 125

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
             E+   + GSG  +      A      S ++   +  KA+S A      + +
Sbjct: 126 SVEDIYASTGSGSPFVYGVLEAEYQKNMSLDDGINLVIKAISAAKQRDSASGN 178


>gi|156836420|ref|XP_001642274.1| hypothetical protein Kpol_218p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156112761|gb|EDO14416.1| hypothetical protein Kpol_218p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 261

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VVIA D + + G  V   N  K+ R+      AG AG++AD   + + 
Sbjct: 29  GTTIVGVKFDGGVVIAADTRSTQGPIVADKNCAKLHRIAPRIWCAG-AGTAADTEAVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   +E +     R    ++        + KY  ++ A +++A  D T   + +      
Sbjct: 88  IGSNIELHSLYSNREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGAHLFSIHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
                  ++GSG   A++   +      + EE  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDVGYYHSLGSGSLAAMAVLESNWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           +VG +
Sbjct: 208 EVGKD 212


>gi|82752963|ref|XP_727486.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23483352|gb|EAA19051.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii]
          Length = 287

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  +    +++A D + S+G  +   N  K+  + K  I+   AG +AD F   +
Sbjct: 58  KGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKY-ILGTMAGGAADCFYWEK 116

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L + ++ Y  +        A    +   L   +   L         D T   +     +
Sbjct: 117 YLGQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDE 176

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
             + E  + + GSG +YA S   +      S   A E+ R A+  A      +   + +
Sbjct: 177 GKKVEGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRDGGSGGKVRV 235


>gi|50293069|ref|XP_448962.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528275|emb|CAG61932.1| unnamed protein product [Candida glabrata]
          Length = 261

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+  G VVIA D + + G  V   N  K+ R+      AG AG++AD   + + 
Sbjct: 29  GTTIVGVKFAGGVVIAADTRSTQGPIVADKNCAKLHRISPRIWCAG-AGTAADTEAVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   +E +     RS   ++        + KY  ++ A +++A  D T   + +      
Sbjct: 88  IGSNIELHSLYTNRSPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGAHLFSIHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
                  ++GSG   A++   +      + EE I   A +I A I   + +  N+ +  +
Sbjct: 148 TDVGYYQSLGSGSLAAMAVLESHWKPDMTKEEAIQLAADAIEAGIWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           ++G +
Sbjct: 208 EIGKD 212


>gi|307178286|gb|EFN67058.1| Proteasome subunit beta type-7 [Camponotus floridanus]
          Length = 277

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     V++ GD + +    V    + K+  L       G AG++AD     E 
Sbjct: 39  GTTIAGVVYKDGVILGGDTRATEDTIVADKYSLKIHYLAPNMYCCG-AGTAADTEMTTEM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R       +  + + L   +  I  A      D     +        
Sbjct: 98  IASQLELHRLNTGRIVPVCTANTLIKQMLFRYQGHIGAALILGGFDLDGPQLYCIYPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
             +     +GSG   A++   +          A+++   A+       + +  N+ L  +
Sbjct: 158 TEKLKYTTMGSGSLAAMAVFESRWRPDLPEEEAKQLVADAIRAGVFNDLASGSNVDLCVI 217

Query: 186 KV 187
           + 
Sbjct: 218 RK 219


>gi|320163476|gb|EFW40375.1| proteasome subunit beta type-1 [Capsaspora owczarzaki ATCC 30864]
          Length = 238

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 60/204 (29%), Gaps = 22/204 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                   +  T++ V  +   V+A D ++S    +   N  K   L    ++A   G  
Sbjct: 24  HDFSPYASNGGTVVAVAGENFAVVASDTRLSEYYGIHTRNCPKTFVLSDKTVLA-SCGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + +  +L +Y +Q  ++    A    +   L             I  +     
Sbjct: 83  GDVLTLTKNIFTRLRKYEHQHEKTMATHAIAQMLSNTLYYRRFFPFYTYNVIGGLDESGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNS---AEEIARK 164
               +             A G+  +         +              +   A  I + 
Sbjct: 143 GAVYSYDPVGSYERESYRAAGTASALLQPLLDNQLGYKNLAPNVPRPPLTVARAVAIVKD 202

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
             + A +  +YT  ++ ++ +   
Sbjct: 203 VFAAATERDIYTGDSVDIQVITSE 226


>gi|195441689|ref|XP_002068635.1| GK20318 [Drosophila willistoni]
 gi|194164720|gb|EDW79621.1| GK20318 [Drosophila willistoni]
          Length = 233

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 23/209 (11%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           V        + +  +I+ +  +   VIA D ++S G  +      K+ +L + +++ G  
Sbjct: 15  VQHHDFSPYESNGGSIVAIAGEDFAVIAADTRLSSGYNIHTRTQNKLFKLSENSVL-GST 73

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILI-----ADK 115
           G  +D  +L   L+ +++ Y +  L+     A    +    Y R      +       DK
Sbjct: 74  GCWSDTLSLTGLLKVRMQMYEHTHLKVMSTDALAQMLSITMYNRRFFPYYVSNILAGVDK 133

Query: 116 TITL-VITGMGDVLEPENGVMAIGSGGSYALSAARAL---MSTQNS-----------AEE 160
                V +             A G+ G              +   S           A  
Sbjct: 134 DGKGVVYSYDPIGHCERATYRAGGTAGPLLQPVLDNQIGYKNQNLSQDELPKLSIDRAVA 193

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGD 189
           +A      AA+  +YT  ++++  +   +
Sbjct: 194 VAFDTFISAAERDIYTGDSVIINIITKDE 222


>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
           crenarchaeote HF4000_ANIW141J13]
          Length = 208

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 11/186 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT + ++    VV+  D + S G  +   N  K++++     +   AG  ADA  L 
Sbjct: 8   LHGTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGL-TLAGGVADAQNLT 66

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
           + L      +  Q   +    +                 IA       D+    +     
Sbjct: 67  DILRYHANVHAVQKNENIPIKSLARLCSLVFHQNRGYPFIADILLGGYDRDGPALFNIDM 126

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                +   +  GSG   A            + E+   IA +A+  A    + T   I +
Sbjct: 127 FGSVEKKSYVTTGSGSPVAYGVLEDEYRDDLTLEDAKLIALRAVKAAIVRNIGTGDGINI 186

Query: 183 ETLKVG 188
             +   
Sbjct: 187 AAINKN 192


>gi|289672015|ref|ZP_06492905.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae pv.
           syringae FF5]
          Length = 128

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 65/123 (52%), Positives = 88/123 (71%), Gaps = 1/123 (0%)

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
              ADAFTL ER E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+IT
Sbjct: 1   APPADAFTLFERFEAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIIT 60

Query: 123 GMGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           G GDV+EPE+G++A+GSGG     +A   L+ T  SA EIA  ++ IA DICV+TNHNI 
Sbjct: 61  GNGDVVEPEDGLIAMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNIT 120

Query: 182 LET 184
           +E 
Sbjct: 121 IEE 123


>gi|260799786|ref|XP_002594865.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
 gi|229280102|gb|EEN50876.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
          Length = 235

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 21/201 (10%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                 +  T+L +  +   V+A D ++S   +++  ++ K  +L    ++ G  G   D
Sbjct: 24  FSPYSWNGGTVLAIAGEDYAVLACDARLSEYFSILSRDSPKRYKLTDMTVL-GCCGFHGD 82

Query: 68  AFTLLERLEKKLE--QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL 119
             TL + L+ +L+  ++ +    S   +A       Y R               ++    
Sbjct: 83  VLTLTKMLDARLKNYKHEHNKTMSCKSIAAMLSTVLYYRRFFPYYTYNILAGLDEEGKGC 142

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARA------------LMSTQNSAEEIARKAMS 167
           V +             A GS  +                    L   +  A  + +    
Sbjct: 143 VYSFDPIGSYEREVYRAGGSASALLQPLLDNQIGMKNMQGVQRLPVPKEKAVALVKDVFI 202

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  +YT   I++  +   
Sbjct: 203 SAAERDIYTGDQIIINVITKD 223


>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
 gi|74555067|sp|Q6LZD4|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
          Length = 219

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 14/200 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M+   + H    M  TT + +  +  VV+A D + ++G  +    A+K+ ++    I   
Sbjct: 1   MISNSEYHKEY-MKGTTTVGLLCNDGVVLATDKRATMGNLIADKEAKKLYKIDDY-IAMT 58

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            AGS  DA +L+  +  + + Y  +   +   L+    +   L       L+    +   
Sbjct: 59  IAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGY 118

Query: 121 ITGMG---------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
               G           +  E+   A GSG   A     +   +  + E+   IA KA+S 
Sbjct: 119 DLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLESEYKSDIAIEKGLLIAVKALSS 178

Query: 169 AADICVYTNHNIVLETLKVG 188
           A     Y+ + I L  +   
Sbjct: 179 AMQRDAYSGNGISLAHINKD 198


>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
 gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
 gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
 gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
          Length = 237

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 67/203 (33%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            K      +  T+L V  +   ++A D ++S G ++   ++ K  +L    ++ G +G  
Sbjct: 24  HKFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVL-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + +E +L+ Y +   +S    A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIARKA 165
               +         +   A GS  +         +             TQ  A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEHVPLTQEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALKVCIVSKE 225


>gi|242023933|ref|XP_002432385.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
 gi|212517808|gb|EEB19647.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
          Length = 219

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 24/208 (11%)

Query: 4   MGDKHYAVKM---HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M  K    +    +  +I+ +  +   VI  D ++S   ++   N  K+ +L    ++ G
Sbjct: 1   MNPKETPFEFYTDNGGSIVAIAGEDFAVIGSDTRLSSNYSIFTRNQSKLFKLSDTTVL-G 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +G   D   L + +  +++ Y +   +  V  A    +   L     M  +        
Sbjct: 60  CSGCWCDTLQLTKVVRAQMQMYFHDNNKVMVTPAVSQMLSTLLYYKRFMPYLVYNVLAGL 119

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM---------STQNSAEE--- 160
            D+    V +         +   A GS G+         +           Q + E+   
Sbjct: 120 DDQGKGCVYSYDPIGHCERSTFRAGGSSGALLQPLLDNQLGYHNMENVKKEQLTLEKALS 179

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVG 188
           + +     AA+  +YT  +I +  +K  
Sbjct: 180 VLKDVFIAAAERDIYTGDSIAIYVIKKD 207


>gi|126465836|ref|YP_001040945.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
 gi|302595723|sp|A3DN27|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
          Length = 208

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 63/181 (34%), Gaps = 12/181 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D + + G  V     +K+ R+    I    +G  ADA  + E+ 
Sbjct: 10  TTTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRIDDY-IAMTISGLVADAEIIAEQA 68

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--------ILIADKTITLVITGMGDV 127
                +Y  +L R     A    +   L     M        +   D     +       
Sbjct: 69  RFIARKYKLELGRPIKVSALASNLSIILNAYLRMSPYIVQLLLGGYDDNGPHLFYIDLFG 128

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E   MA GSG   A         +  S   A+E+A KA+S A     ++   + +  
Sbjct: 129 SLSEEKYMATGSGSPTAFGVLEEEYRSDLSLDEAKELAFKAVSAATKRDGFSGEGVDIVV 188

Query: 185 L 185
           +
Sbjct: 189 I 189


>gi|301624029|ref|XP_002941310.1| PREDICTED: proteasome subunit beta type-7-like [Xenopus (Silurana)
           tropicalis]
          Length = 279

 Score =  112 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 60/184 (32%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA  + + 
Sbjct: 44  GTTIAGIIYKDGVILGADRRATDDMVVADKNCAKIHYITDNIYCCG-AGVAADAENVTQL 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           L   L  +     R       +  + ++L   +  I         D     + +      
Sbjct: 103 LSSNLHIHAMTTGRQPRVCTANRILKQFLYRYQGHIGASIIVGGVDIKGPQLYSIYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
                  A+GSG + A++            EE   +  +A++      + +   + L  +
Sbjct: 163 TDRVPFTALGSGSAAAIAVLEDRFKPNMELEEGKRLVTEAITAGIMCDLGSGSGVDLCII 222

Query: 186 KVGD 189
              +
Sbjct: 223 TKEE 226


>gi|323449160|gb|EGB05050.1| hypothetical protein AURANDRAFT_69937 [Aureococcus anophagefferens]
          Length = 279

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 15/191 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +    TTI  +  DG +V+  D + + G  V   N  K+  L       G AG++AD 
Sbjct: 41  QPMST-GTTICGMVYDGGIVLGADTRATAGSEVADKNCEKIHYLAPNIYCCG-AGTAADT 98

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVIT 122
               E +  +LE         S  +A    + + L   +  I  A      D T   +  
Sbjct: 99  EKTTELIASQLELLRLSTGTQSRVVAAVTLLKRMLFKYQGHIGAALVLGGVDCTGPGLYQ 158

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTN 177
                   +   + +GSG   A+S              A  + + A+   A I   + + 
Sbjct: 159 IYPHGSTSKLPYVTMGSGSLAAMSVFETEYKDGMDEAGAVALVKNAIR--AGIFNDLGSG 216

Query: 178 HNIVLETLKVG 188
            N+ +  ++ G
Sbjct: 217 SNVDVTIIRAG 227


>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
 gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
 gi|302595750|sp|A9A788|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|302595838|sp|A6VK02|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
 gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
          Length = 219

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 14/200 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M+   + H    M  TT + +     VV+A D + ++G  +    A+K+ ++    I   
Sbjct: 1   MISNSEYHKEY-MKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDY-IAMT 58

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            AGS  DA +L+  +  + + Y  +   +   L+    +   L       L+    +   
Sbjct: 59  IAGSVGDAQSLIRLISAEAKIYKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGY 118

Query: 121 ITGMG---------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
               G           +  E+   A GSG   A     A   +  + ++   +A KA+S 
Sbjct: 119 DLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSS 178

Query: 169 AADICVYTNHNIVLETLKVG 188
           A     Y+ + I L  +   
Sbjct: 179 AMQRDAYSGNGISLAHINKD 198


>gi|258653140|ref|YP_003202296.1| 20S proteasome subunit A and B [Nakamurella multipartita DSM 44233]
 gi|302595776|sp|C8XAQ4|PSB_NAKMY RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|258556365|gb|ACV79307.1| 20S proteasome A and B subunits [Nakamurella multipartita DSM
           44233]
          Length = 288

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 26/190 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +  +  VV+AGD + ++G  + + +  KV      + I G AG++  A  ++ 
Sbjct: 56  HGTTIVALTCEQGVVVAGDRRATMGNIIAQRDIEKVFVADSHSAI-GIAGTAGLAVEMVR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG---------- 123
               +LE Y            K  R+   +R    M +     + L              
Sbjct: 115 LFRLELEHYEKIEGVRLSLDGKANRLATMIRGNLGMAMQGLAVVPLFAGVEEDPEVDPVK 174

Query: 124 ---MGDVL---------EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
               G  +           E+   A+GSG ++A SA +   +       A   A +A+  
Sbjct: 175 RGPGGGRIFSYDVAGGKYEEHDYYAVGSGSTFARSALKKRYNAAADLPGAVRTAVEALYD 234

Query: 169 AADICVYTNH 178
           AAD    T  
Sbjct: 235 AADDDSATGG 244


>gi|68069847|ref|XP_676835.1| 20S proteasome beta subunit [Plasmodium berghei strain ANKA]
 gi|56496705|emb|CAH96419.1| 20S proteasome beta subunit, putative [Plasmodium berghei]
          Length = 269

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 66/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L  +    +++A D + S+G  +   N  K+  + K  I+   AG +AD F   +
Sbjct: 57  KGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKY-ILGTMAGGAADCFYWEK 115

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            L + ++ Y  +        A    +   L   +   L         D T   +     +
Sbjct: 116 YLGQIIKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDE 175

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
             + E  + + GSG +YA S   +      S   A E+ R A+  A      +   + +
Sbjct: 176 GKKVEGNLFSCGSGSTYAYSILDSAYDYNLSVDQAVELGRNAIYHATFRDGGSGGKVRV 234


>gi|1799522|dbj|BAA19146.1| proteasome component PUP1 precursor [Schizosaccharomyces pombe]
          Length = 258

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     +V+  D + + G  +   N +K+  +      AG AG++AD   +   
Sbjct: 26  GTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAG-AGTAADTEFVTSM 84

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +        +   D     + T      
Sbjct: 85  ISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLGGYDCKGPHLFTIAAHGS 144

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   +A+GSG   A+S              A E+ ++A+   A I   + +  N  L 
Sbjct: 145 SDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIE--AGIFNDLGSGSNCDLV 202

Query: 184 TLKVG 188
            +   
Sbjct: 203 VIDEE 207


>gi|169770057|ref|XP_001819498.1| proteasome component PUP1 [Aspergillus oryzae RIB40]
 gi|238487592|ref|XP_002375034.1| proteasome component Pup1, putative [Aspergillus flavus NRRL3357]
 gi|83767357|dbj|BAE57496.1| unnamed protein product [Aspergillus oryzae]
 gi|220699913|gb|EED56252.1| proteasome component Pup1, putative [Aspergillus flavus NRRL3357]
          Length = 272

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 68/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDNGVVIAADTRATSGPIVADKNCEKLHYISPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSNVELHSLSTGRDPRVITCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S   +          A E+  +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESTWKANLNREEAVELCAEAIK--AGIFNDLGSGSNVDVC 205

Query: 184 TLKVG 188
            ++  
Sbjct: 206 VIEKD 210


>gi|308198291|ref|XP_001386964.2| 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1
           [Scheffersomyces stipitis CBS 6054]
 gi|149388951|gb|EAZ62941.2| 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1
           [Pichia stipitis CBS 6054]
          Length = 267

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  +  G VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGCKFKGGVVIAADTRATAGSIVADKNCEKLHRLAPKIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    +         + KY  +L A +++A  D T   +++      
Sbjct: 88  IASNLELHGLYQNRQPRVITALTMLKQHLFKYQGHLGAYLIVAGVDPTGAHLLSVQAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
                  ++GSG   A++          + EE  +  A +I + I   + +  N+ +  +
Sbjct: 148 TDIGKYQSLGSGSLAAMAVLETNFKEDMTKEEAIKLCADAIESGIWNDLGSGSNVDICVM 207

Query: 186 KVGDE 190
           +VG +
Sbjct: 208 EVGKD 212


>gi|301118843|ref|XP_002907149.1| proteasome subunit beta type-6, putative [Phytophthora infestans
           T30-4]
 gi|262105661|gb|EEY63713.1| proteasome subunit beta type-6, putative [Phytophthora infestans
           T30-4]
          Length = 673

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ VR +G VV+  D + S G  V    + K+  L         +GS+AD   L + 
Sbjct: 475 GTSIIAVRFNGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLFCC-RSGSAADTQALSDY 533

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L  +  +L R                     L A I++A         V +     
Sbjct: 534 VRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGG 593

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              E      GSG +Y      +      + EE     +KA++ A      +   I   T
Sbjct: 594 AMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHAMARDGSSGGVIRTVT 653

Query: 185 LKVGD 189
           +   +
Sbjct: 654 ITENE 658


>gi|327303268|ref|XP_003236326.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
 gi|326461668|gb|EGD87121.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
          Length = 275

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R+         + ++L   +  I         D T T + T      
Sbjct: 88  ISSNIELHSLSTGRAPRVATCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S   ++     +   A ++A +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPSLTKDEAIKLASEAIQ--AGIWNDLGSGSNVDVC 205

Query: 184 TLKVG 188
            ++  
Sbjct: 206 VMEKD 210


>gi|224130004|ref|XP_002320726.1| predicted protein [Populus trichocarpa]
 gi|222861499|gb|EEE99041.1| predicted protein [Populus trichocarpa]
          Length = 223

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 64/212 (30%), Gaps = 25/212 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M     +      +  T + +      V+A D ++S G  ++  +  K+ +L     +  
Sbjct: 1   MTKQQARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLAD-KCLMA 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +G  AD   L + L  K   Y +Q  +     A    +   L                 
Sbjct: 60  SSGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGF 119

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
            ++    V T        + G  A GSG    +      +                 T+ 
Sbjct: 120 DEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPAQDAVTPLTEA 179

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            A ++ +   + A +  +YT   + +  +   
Sbjct: 180 EAIDVVKDVFASATERDIYTGDKLEIVIVNAD 211


>gi|189200881|ref|XP_001936777.1| proteasome subunit beta type-9 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187983876|gb|EDU49364.1| proteasome subunit beta type-9 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 254

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYIAPQIWCAG-AGTAADTEFTTAI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGAHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA-RKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S          + E+     A +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKGDLTREDAVTLCANAIEAGIWNDLGSGSNVDVAVI 207

Query: 186 KVG 188
              
Sbjct: 208 TEE 210


>gi|229092870|ref|ZP_04224004.1| ATP-dependent protease hslV [Bacillus cereus Rock3-42]
 gi|228690492|gb|EEL44275.1| ATP-dependent protease hslV [Bacillus cereus Rock3-42]
          Length = 115

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 63/115 (54%), Positives = 88/115 (76%), Gaps = 3/115 (2%)

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
             E KLE+Y   L R++VE+AK WR DK LR LEAM+++ DKT  L+++G G+V+EP++G
Sbjct: 1   MFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAMLIVMDKTTMLLVSGTGEVIEPDDG 60

Query: 134 VMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           ++AIGSGG+YALSA RAL    S   +A++IA+ ++ IA DICVYTNHNI++E L
Sbjct: 61  ILAIGSGGNYALSAGRALKQYASEHLTAKQIAKASLEIAGDICVYTNHNIIVEEL 115


>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 237

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  D   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYTFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   ++    A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIARKA 165
               +         +   A GS  +         +             TQ  A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMDGVQQVPLTQEKAIQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALHICIITKE 225


>gi|118488258|gb|ABK95948.1| unknown [Populus trichocarpa]
          Length = 223

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 64/212 (30%), Gaps = 25/212 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M     +      +  T + +      V+A D ++S G  ++  +  K+ +L     +  
Sbjct: 1   MTKQQARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLAD-KCLMA 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +G  AD   L + L  K   Y +Q  +     A    +   L                 
Sbjct: 60  SSGFQADVKALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGF 119

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
            ++    V T        + G  A GSG    +      +                 T+ 
Sbjct: 120 DEEGKGCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQLKSPSPLLLPALDAVTPLTEA 179

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            A ++ +   + A +  +YT   + +  +   
Sbjct: 180 EAIDVVKDVFASATERDIYTGDKLEIVIVNAD 211


>gi|40889391|pdb|1Q5Q|H Chain H, The Rhodococcus 20s Proteasome
 gi|40889392|pdb|1Q5Q|I Chain I, The Rhodococcus 20s Proteasome
 gi|40889393|pdb|1Q5Q|J Chain J, The Rhodococcus 20s Proteasome
 gi|40889394|pdb|1Q5Q|K Chain K, The Rhodococcus 20s Proteasome
 gi|40889395|pdb|1Q5Q|L Chain L, The Rhodococcus 20s Proteasome
 gi|40889396|pdb|1Q5Q|M Chain M, The Rhodococcus 20s Proteasome
 gi|40889397|pdb|1Q5Q|N Chain N, The Rhodococcus 20s Proteasome
          Length = 235

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 69/184 (37%), Gaps = 22/184 (11%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ +   G V++AGD + + G  +   +  KV    + +  AG AG++  A  L+   
Sbjct: 1   TTIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSA-AGIAGTAGIAIELVRLF 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM----------- 124
             +LE Y            K  R+   +R      +     + L++              
Sbjct: 60  AVELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGR 119

Query: 125 -------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICV 174
                  G   E   G  A+GSG  +A SA + + S      +A   A +++  AAD   
Sbjct: 120 IVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSPDSDEETALRAAIESLYDAADDDS 179

Query: 175 YTNH 178
            T  
Sbjct: 180 ATGG 183


>gi|17380265|sp|Q9P992|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
          Length = 210

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 12/187 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + V     +V+A + + ++G  +    A+KV ++    +    AGS  DA  L+
Sbjct: 7   LKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDD-LVGMTTAGSVGDAQQLV 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             +  + + Y  +   S         M  +L       ++        DK    + +   
Sbjct: 66  RLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYSLDA 125

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIV 181
                 E  + A GSG   A            + +E   +A +A+  A      +  NI 
Sbjct: 126 MGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENID 185

Query: 182 LETLKVG 188
           +  +   
Sbjct: 186 VVVITKE 192


>gi|17380207|sp|Q9IB84|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
           proteasome beta-6 subunit A; Short=B6-A
 gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
          Length = 238

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            K      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 25  HKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 83

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + +E +L+ Y +   +S    A    +   L             I  +     
Sbjct: 84  GDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 143

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 144 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDV 203

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 204 FISAAERDVYTGDALKICIITKE 226


>gi|255717793|ref|XP_002555177.1| KLTH0G03168p [Lachancea thermotolerans]
 gi|238936561|emb|CAR24740.1| KLTH0G03168p [Lachancea thermotolerans]
          Length = 263

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG V+IA D + + G  V   N  K+ R+      AG AG++AD   + + 
Sbjct: 29  GTTIVGVKYDGGVLIAADTRSTQGPIVANKNCAKLHRISPKIWCAG-AGTAADTEEVTKL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     R    ++    + ++L   +  I        AD T T + +      
Sbjct: 88  IGSNLELHSMYASREPRVVSALQMLKQHLFKYQGHIGAYLIVAGADPTGTHLFSIHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
                  ++GSG   A++   A          A ++A  A+   A I   + +  N+ L 
Sbjct: 148 TDVGFYQSLGSGSLAAMAVLEANWRPDLKKEEAMQLASDAIE--AGIWNDLGSGSNVDLC 205

Query: 184 TLKVGDE 190
            ++ G +
Sbjct: 206 IMETGKD 212


>gi|194880359|ref|XP_001974418.1| GG21097 [Drosophila erecta]
 gi|190657605|gb|EDV54818.1| GG21097 [Drosophila erecta]
          Length = 245

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 11/177 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +     G +++  D + + G+ +   N +KV ++ K  ++   AG +AD      
Sbjct: 34  HGTTTVGFVYQGGIILCVDSRATSGKFIGSQNVQKVVQVNKY-MLGTMAGGAADCTYWDR 92

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGD 126
            L ++   +  +        +    +       + M L     +         ++    D
Sbjct: 93  ALTRECRLHELRFKERLPVRSAARFICNVAAEYKGMGLCMGMMLAGWSPEGFSLVYVDSD 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
            L     V A+GSG   AL           S   A ++A +A+  A    +++   +
Sbjct: 153 GLRLHGKVFAVGSGSHNALGILDTDYRLDLSDDEAYDLAFRAVYHATMRDIFSGGLV 209


>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
           veneficus SNP6]
 gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
           veneficus SNP6]
          Length = 214

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 68/197 (34%), Gaps = 13/197 (6%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M D    +    TT + +     +V+A + + ++G  +    A+K+ ++    +    AG
Sbjct: 1   MQDMQD-MVFKGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQVAD-RVAMTTAG 58

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK------YLRNLEAMILIA-DKT 116
           S  DA  L   ++ +   Y  +        A    +        Y      +++   DK 
Sbjct: 59  SVGDAQFLARLVKVEASLYETRKEEKPTVKAIATMLSNLLNSSRYFPYFVQLLIGGVDKR 118

Query: 117 ITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADI 172
              + +         E  ++A GSG   A          + +     E+A +A++ A   
Sbjct: 119 GPSMFSIDPIGGAIEETDIVATGSGSPTAYGVLEDRYYPEITTQEGVELAIRAITSAMKR 178

Query: 173 CVYTNHNIVLETLKVGD 189
              +   I +  +   +
Sbjct: 179 DSASGDGIDVVKITKDE 195


>gi|67616602|ref|XP_667496.1| proteasome component precursor [Cryptosporidium hominis TU502]
 gi|54658633|gb|EAL37261.1| proteasome component precursor [Cryptosporidium hominis]
          Length = 279

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 10/181 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +  VV+  D + + G  V   +  K+ RL      AG AG++AD   +   
Sbjct: 41  GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAG-AGTAADLDHVTSL 99

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +E  LE    Q+ R              + KY   + A +++A  D T   V     +  
Sbjct: 100 IEGNLELQKLQMNRKPRVAHAVSMLSDHLYKYQGYVGAHLIVAGSDSTGNFVFQVSANGC 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +    ++GSG   A S   A      +     E+   A+       +Y+  N+ +  +
Sbjct: 160 IMQLPFTSMGSGSLCARSILEARYRDGLTESECVELVSDAIRAGIYNDLYSGSNVNILII 219

Query: 186 K 186
           K
Sbjct: 220 K 220


>gi|330468523|ref|YP_004406266.1| 20S proteasome a and b subunits [Verrucosispora maris AB-18-032]
 gi|328811494|gb|AEB45666.1| 20S proteasome a and b subunits [Verrucosispora maris AB-18-032]
          Length = 266

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 68/185 (36%), Gaps = 21/185 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +   G VV+AGD + ++G  + + +  KV      + + G AG++     L+ 
Sbjct: 39  HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHPADAYS-LVGIAGTAGIGIELMR 97

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
             + +LE Y            K  R+   +R      +     I L              
Sbjct: 98  LFQVELEHYEKIEGAMLSLDGKANRLASMIRGNLGAAMQGLAVIPLFAGFDLAAKDPARA 157

Query: 126 ---------DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
                         E G  AIGSG  +A SA +       S   A  +A +A+  AAD  
Sbjct: 158 GRIFSFDVTGGPYEETGYDAIGSGSLFARSALKKRFRAGLSIDDAVRLAVEALYDAADDD 217

Query: 174 VYTNH 178
             T  
Sbjct: 218 TATGG 222


>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
 gi|302595749|sp|A4FYA5|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanococcus maripaludis
           C5]
          Length = 219

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 14/200 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M+   + H    M  TT + +     VV+A D + ++G  +    A+K+ ++    I   
Sbjct: 1   MISNSEYHKEY-MKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDY-IAMT 58

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            AGS  DA +L+  +  + + +  +   +   L+    +   L       L+    +   
Sbjct: 59  IAGSVGDAQSLIRIISAEAKIHKMRTGNNMTPLSCTTLISNVLHGNRHYPLLTQLILGGY 118

Query: 121 ITGMG---------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
               G           +  E+   A GSG   A     A   +  + ++   +A KA+S 
Sbjct: 119 DLINGAKLFSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSS 178

Query: 169 AADICVYTNHNIVLETLKVG 188
           A     Y+ + I L  +   
Sbjct: 179 AMQRDAYSGNGISLAHINKD 198


>gi|121543861|gb|ABM55595.1| putative proteasome subunit, beta type, 1 [Maconellicoccus
           hirsutus]
          Length = 229

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 70/209 (33%), Gaps = 21/209 (10%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           +     +      +  +I+ V  D  V+IA D ++S G ++   +  K+ +L K + +A 
Sbjct: 11  VKTHEPRFNPYDDNGGSIVAVGGDDFVIIASDTRLSTGYSIYTRHQSKIFKLSKISALAC 70

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            AG  +D  T    +  +++ Y ++  +     A    +   + +           +  +
Sbjct: 71  -AGCWSDVLTFTRLINARMQMYLHEHNKEMSTPALAQMLSTMMYHKRFFPYYVSNILGGL 129

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------------------AEE 160
                  +   + +  +      A  ++ AL+                         A  
Sbjct: 130 EKDGSGWIYSYDPIGNMERSKFRAGGSSGALLQPLLDNQLGFANMENVESRSISLEKALA 189

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGD 189
           + R     AA+  +YT   I +  +   +
Sbjct: 190 VVRDVFISAAERDIYTGDKIHVTVITKDE 218


>gi|118617841|ref|YP_906173.1| proteasome (beta subunit) PrcB [Mycobacterium ulcerans Agy99]
 gi|183983084|ref|YP_001851375.1| proteasome (beta subunit) PrcB [Mycobacterium marinum M]
 gi|302595767|sp|B2HFV6|PSB_MYCMM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|302595774|sp|A0PQT3|PSB_MYCUA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|118569951|gb|ABL04702.1| proteasome (beta subunit) PrcB [Mycobacterium ulcerans Agy99]
 gi|183176410|gb|ACC41520.1| proteasome (beta subunit) PrcB [Mycobacterium marinum M]
          Length = 289

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ ++  G V+IAGD + + G  +   + RKV          G AG++A A     
Sbjct: 54  HATTIVALKYPGGVLIAGDRRSTQGNMIAGRDVRKVYITDDYTA-TGIAGTAAIAVEFAR 112

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R   A  +     + L+ +           
Sbjct: 113 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRGNLAAAMQGLVALPLLASYDIHASDPRSA 172

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    G     E G  A+GSG  +A S+ + L +     +SA  +A +A+  AAD 
Sbjct: 173 GRIVSFDAAGGWNIEEEGYQAVGSGSIFAKSSIKKLYAQVTDADSALRVAVEALYDAADD 232

Query: 173 CVYTNH 178
              T  
Sbjct: 233 DSATGG 238


>gi|303312105|ref|XP_003066064.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105726|gb|EER23919.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 277

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPSIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   LE +     R    +     + ++L   +        +   D T   + T      
Sbjct: 88  ISSNLELHALSTGRKPRVITCMTMLKQHLFRYQGYVGAYLVVAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S    + +   + ++ I   + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWTPNLNKDQAIVLASEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 EQD 210


>gi|109734432|gb|AAI17734.1| Proteasome (prosome, macropain) subunit, beta type, 11 [Mus
           musculus]
 gi|109734838|gb|AAI17733.1| Proteasome (prosome, macropain) subunit, beta type, 11 [Mus
           musculus]
 gi|148704390|gb|EDL36337.1| mCG51940 [Mus musculus]
          Length = 302

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    +RKV  +    ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPV-HQRLLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L ++L     +  +          +   +     + L         D +   +
Sbjct: 101 CATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMSCYRGLDLCVATALCGWDHSGPAL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            +   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|72537676|gb|AAZ73764.1| 20S proteasome beta subunit [Cirrhinus molitorella]
          Length = 237

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            K      +  T+L V  +   ++A D ++S G ++   ++ K  +L    ++ G +G  
Sbjct: 24  HKFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVL-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   ++    A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEEVPLTLEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALEICIITKE 225


>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
          Length = 217

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +     V++A + +V++   +M  N +K+ ++         AG   DA  L+  
Sbjct: 8   GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTG-MTIAGLVGDAQVLVRY 66

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           ++ +LE Y  Q   +    A    +   L  ++ M      ++    T   V +      
Sbjct: 67  MKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGG 126

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             E+   + GSG  +      +  S + + +E   +  +A+S A      +   I +  +
Sbjct: 127 SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVI 186

Query: 186 KVGD 189
              D
Sbjct: 187 TRKD 190


>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
 gi|130867|sp|P28061|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
 gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
 gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
 gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
 gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
 gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
 gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
 gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
 gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
 gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
 gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
 gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
 gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
 gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
 gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
 gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
          Length = 211

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +     V++A + +V++   +M  N +K+ ++         AG   DA  L+  
Sbjct: 8   GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTG-MTIAGLVGDAQVLVRY 66

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           ++ +LE Y  Q   +    A    +   L  ++ M      ++    T   V +      
Sbjct: 67  MKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGG 126

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             E+   + GSG  +      +  S + + +E   +  +A+S A      +   I +  +
Sbjct: 127 SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVI 186

Query: 186 KVGD 189
              D
Sbjct: 187 TRKD 190


>gi|302774737|ref|XP_002970785.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
 gi|302818938|ref|XP_002991141.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
 gi|300141072|gb|EFJ07787.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
 gi|300161496|gb|EFJ28111.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
          Length = 226

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + +  T + +      ++A D ++SLG +++     K+ +L    ++A  +G  AD 
Sbjct: 12  SPYENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMA-SSGFQADV 70

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            TL + LE + + Y +Q  +     A    +   L         +   +  +        
Sbjct: 71  RTLQKNLEARQKGYYHQHGKPMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCV 130

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARK 164
            T          G    GSG    +      +                 T+  A EI + 
Sbjct: 131 YTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEALEIVKD 190

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
             + A +  +YT   + +  +   
Sbjct: 191 TFASATERQIYTGDGLEIVVINKD 214


>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 227

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 70/204 (34%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T+L V  +  V+ A D ++S G +++  N  KV ++     +   AG  ADA
Sbjct: 13  SPYDNNGGTVLAVAGENYVICASDTRMSTGYSILTRNYEKVDQMSP-KTLMASAGFMADA 71

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            TL + L+ + +QY  Q  +    ++    +   L         A   +  +        
Sbjct: 72  QTLKKTLKARCKQYEFQNKKPIGCVSFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAV 131

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST----------------QNSAEEIARK 164
            T               GSG +  +      + T                + +A E+ + 
Sbjct: 132 FTYDAVGSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAVSSATPLSEAAAIELIKD 191

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
             + AA+  +YT   + L  +   
Sbjct: 192 CFATAAERDIYTGDRVELWIMNAD 215


>gi|302509436|ref|XP_003016678.1| hypothetical protein ARB_04970 [Arthroderma benhamiae CBS 112371]
 gi|302655770|ref|XP_003019669.1| hypothetical protein TRV_06298 [Trichophyton verrucosum HKI 0517]
 gi|291180248|gb|EFE36033.1| hypothetical protein ARB_04970 [Arthroderma benhamiae CBS 112371]
 gi|291183406|gb|EFE39024.1| hypothetical protein TRV_06298 [Trichophyton verrucosum HKI 0517]
          Length = 275

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R+         + ++L   +  I         D T T + T      
Sbjct: 88  ISSNIELHSLSTGRAPRVATCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S   ++     +   A ++A +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPSLTKDEAIKLASEAIQ--AGIWNDLGSGSNVDVC 205

Query: 184 TLKVG 188
            ++  
Sbjct: 206 VMEKD 210


>gi|30424826|ref|NP_780413.1| proteasome subunit beta type-11 precursor [Mus musculus]
 gi|81895979|sp|Q8BG41|PSB11_MOUSE RecName: Full=Proteasome subunit beta type-11; AltName:
           Full=Proteasome subunit beta-5t; Flags: Precursor
 gi|26332132|dbj|BAC29796.1| unnamed protein product [Mus musculus]
 gi|26334457|dbj|BAC30929.1| unnamed protein product [Mus musculus]
 gi|74183992|dbj|BAE37039.1| unnamed protein product [Mus musculus]
 gi|148537363|dbj|BAF63539.1| proteasome subunit beta5t [Mus musculus]
          Length = 302

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H     H TT L  R    V+ A D + S G  V    +RKV  +    ++   +G+SAD
Sbjct: 42  HGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPV-HQRLLGTTSGTSAD 100

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLV 120
             T    L ++L     +  +          +   +     + L         D +   +
Sbjct: 101 CATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMSCYRGLDLCVATALCGWDHSGPAL 160

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                D    +  + ++GSG  YA            +   A  +AR A++ A     Y+ 
Sbjct: 161 FYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSG 220

Query: 178 HNIVL 182
            ++ L
Sbjct: 221 GSVDL 225


>gi|255932587|ref|XP_002557850.1| Pc12g10270 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582469|emb|CAP80654.1| Pc12g10270 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 277

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 68/186 (36%), Gaps = 14/186 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIYDKGVVIAADTRATSGPIVADKNCEKLHYIAPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSNVELHSLSTGRDPRVITCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S   +          A +I  +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESTWQPDLDRQGAIDICAEAIK--AGIFNDLGSGSNVDVC 205

Query: 184 TLKVGD 189
            ++   
Sbjct: 206 VIEKDQ 211


>gi|229365910|gb|ACQ57935.1| Proteasome subunit beta type-7 precursor [Anoplopoma fimbria]
          Length = 278

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 44  GTTIAGIVYKDGVILGADTRATDDMVVADKNCMKIHYIAPKIYCCG-AGVAADADITTQI 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +   +E +     R  +      ++ + L   +  +         D T   + +      
Sbjct: 103 MSSNVELHMLNTGRPPLVAMVTRQLKQMLFRYQGHVGSSLIVGGVDVTGAHLYSVYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG + A+S              A+++ R A  IAA I   + +  N+ L 
Sbjct: 163 YDKLPFVTMGSGAAAAVSVFEDRFKPNMELEKAKQLVRDA--IAAGIFCDLGSGSNVDLC 220

Query: 184 TLKV 187
            +  
Sbjct: 221 VITK 224


>gi|238064537|ref|ZP_04609246.1| 20S proteasome A and B [Micromonospora sp. ATCC 39149]
 gi|237886348|gb|EEP75176.1| 20S proteasome A and B [Micromonospora sp. ATCC 39149]
          Length = 279

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 68/185 (36%), Gaps = 21/185 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +   G VV+AGD + ++G  + + +  KV      + + G AG++     L+ 
Sbjct: 52  HATTIVAISAAGGVVMAGDRRATMGNLIAQRDIEKVHPADAYS-LVGIAGTAGIGIELMR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
             + +LE Y            K  R+   +R      +     I L              
Sbjct: 111 LFQVELEHYEKIEGAMLSLDGKANRLASMIRGNLGAAMQGLAVIPLFAGFDLAAADQARA 170

Query: 126 ---------DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
                         E G  AIGSG  +A SA +       S   A  +A +A+  AAD  
Sbjct: 171 GRIFSFDVTGGPYEETGYDAIGSGSIFARSALKKRFRAGLSIDDAVRLAVEALYDAADDD 230

Query: 174 VYTNH 178
             T  
Sbjct: 231 TATGG 235


>gi|66359272|ref|XP_626814.1| PUP1/proteasome subunit beta type 7, NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
 gi|46228168|gb|EAK89067.1| PUP1/proteasome subunit beta type 7, NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
          Length = 279

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 10/181 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +  VV+  D + + G  V   +  K+ RL      AG AG++AD   +   
Sbjct: 41  GTTIVGVACNDCVVLGADTRATNGPIVADKDCEKIHRLSDNIFAAG-AGTAADLDHVTSL 99

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +E  LE    Q+ R              + KY   + A +++A  D T   V     +  
Sbjct: 100 IEGNLELQKLQMNRKPRVAHAVSMLSDHLYKYQGYIGAHLIVAGSDSTGNFVFQVSANGC 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +    ++GSG   A S   A      +     E+   A+       +Y+  N+ +  +
Sbjct: 160 IMQLPFTSMGSGSLCARSILEARYRDGLTESECVELVSDAIRAGIYNDLYSGSNVNILII 219

Query: 186 K 186
           K
Sbjct: 220 K 220


>gi|218201500|gb|EEC83927.1| hypothetical protein OsI_30000 [Oryza sativa Indica Group]
          Length = 219

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 25/203 (12%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +  A + +  T + V      V+A D ++S+G +++  ++ K+  L    ++A  +G   
Sbjct: 3   RFEAYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLA-SSGFQG 61

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D   L   L  K   Y +   +     A    +   L         A   +  +      
Sbjct: 62  DVKALQRNLAAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKG 121

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIA 162
              T          G  A G+G +  +      +                 +Q+ A ++ 
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDAVTPLSQSDAVDLV 181

Query: 163 RKAMSIAADICVYTNHNIVLETL 185
           +   + A +  +YT   + +  +
Sbjct: 182 KDVFASATERDIYTGDKLEIVVI 204


>gi|261195200|ref|XP_002624004.1| proteasome component Pup1 [Ajellomyces dermatitidis SLH14081]
 gi|239587876|gb|EEQ70519.1| proteasome component Pup1 [Ajellomyces dermatitidis SLH14081]
 gi|239610635|gb|EEQ87622.1| proteasome component Pup1 [Ajellomyces dermatitidis ER-3]
 gi|327348931|gb|EGE77788.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
          Length = 276

 Score =  111 bits (277), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 14/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     R+   +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNLELHALSTGRAPRVVTCMTMLKQHLFRHQGYIGAYLVVAGVDPTGVGLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S    +         A ++  +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWRPSLNRDDAVKLCSEAIK--AGIFNDLGSGSNVDVC 205

Query: 184 TL 185
            +
Sbjct: 206 VI 207


>gi|224473799|gb|ACN49143.1| proteasome subunit beta type 10 [Oryzias dancena]
          Length = 275

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G     +K   TTI  V     VV+  D + +  + V      K+  +       G AG+
Sbjct: 32  GHPPKPMKT-GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGT 89

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTIT 118
           +AD     + L   L  +     R+   +     +   L           ++   D T  
Sbjct: 90  AADTEKTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGN 149

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            + T        +   +A+GSG   AL               A+E+ R ++       + 
Sbjct: 150 HLYTVGPYGSVTKVPYLAMGSGDLAALGVLEDGFKHDLELEKAKELVRDSIHAGIMSDLG 209

Query: 176 TNHNIVLETLKVG 188
           + +NI +  +   
Sbjct: 210 SGNNIDICVITKQ 222


>gi|268559794|ref|XP_002646072.1| C. briggsae CBR-PBS-2 protein [Caenorhabditis briggsae]
 gi|187032980|emb|CAP27858.1| CBR-PBS-2 protein [Caenorhabditis briggsae AF16]
          Length = 277

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 10/198 (5%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M  +G K   +    TTI+ V   G +V+  D + + G  +   +  KV +L +     G
Sbjct: 32  MCKLGAKAPKLTSTGTTIVAVAYKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACG 91

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIA--D 114
            AG++AD   + + L   L        R +  +         +  Y   + A +LI   D
Sbjct: 92  -AGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVD 150

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
            T   +     +         A GSG   A++       T  +   AE++ ++A+     
Sbjct: 151 PTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKTDMTKEEAEKLVQRALEAGMH 210

Query: 172 ICVYTNHNIVLETLKVGD 189
               + +++ L  ++  +
Sbjct: 211 GDNASGNSLNLVIIEPNE 228


>gi|156096076|ref|XP_001614072.1| 20S proteasome beta subunit [Plasmodium vivax SaI-1]
 gi|148802946|gb|EDL44345.1| 20S proteasome beta subunit, putative [Plasmodium vivax]
          Length = 270

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + + G  V   N  K+  + K    AG AG + D       
Sbjct: 41  GTTICGLVCQNAVILGADTRATEGPIVADKNCSKLHYISKNIYCAG-AGVAGDLEHTTLW 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           L+  +E +               R+ + L   +   + A      D T   +        
Sbjct: 100 LQHNVELHRLNTNTQPRVAMCVSRLTQELFKYQGYKVCAIVLGGVDVTGPQLYGIHPHGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++   A      + E   E+  +A  I A I   + +  N+ + 
Sbjct: 160 SCLLPFTALGSGSLSAMAVLEAKYRDNMTIEEGKELVCEA--ICAGIFNDLGSGGNVDIC 217

Query: 184 TLKVG 188
            +   
Sbjct: 218 VITKD 222


>gi|317124897|ref|YP_004099009.1| proteasome endopeptidase complex, beta component [Intrasporangium
           calvum DSM 43043]
 gi|315588985|gb|ADU48282.1| proteasome endopeptidase complex, beta component [Intrasporangium
           calvum DSM 43043]
          Length = 277

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+++  DG VV+AGD + ++G  +   +  KV      +++ G AG++  A  L+ 
Sbjct: 52  HGTTIVSLLHDGGVVMAGDRRATMGNIIANRDMEKVFIADGYSVV-GIAGTAGIAVELIR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------------DKTITLVI 121
             + +LE Y            K  R+   +R   A+ +              DK I  V 
Sbjct: 111 LYQVELEHYEKIEGAIMSLEGKANRLASMIRGNLALAMQGLTVVPTYAGFDLDKGIGRVY 170

Query: 122 TGM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
           +         E G  + GSG  +A  A + L     S   A  +A +A+  AAD    T 
Sbjct: 171 SYDVTGGCYLEGGHHSSGSGSLFARGALKKLWRPGMSEEAAVRVAVEALYDAADDDSATG 230

Query: 178 H 178
            
Sbjct: 231 G 231


>gi|168019333|ref|XP_001762199.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686603|gb|EDQ72991.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 275

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G+ V   N  K+  L       G AG++AD   + + 
Sbjct: 40  GTTIVGLIFKDGVILGADTRATEGEIVCDKNCEKIHYLAPNISCCG-AGTAADTENVTDM 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +     R S  +     +  +L   +        +   D T   +        
Sbjct: 99  VSSQLVLHRYATGRESRVVTALTMLKSHLFRYQGQVSAALVLGGVDVTGPHLHAVYPHGS 158

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +      + E   EI   A  I A I   + +  N+ L 
Sbjct: 159 TDTLPFATMGSGSLAAMSVFESRYKENLTKEEGMEIVSAA--ICAGIFNDLGSGSNVDLC 216

Query: 184 TLKVG 188
            +   
Sbjct: 217 IITKE 221


>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
           tauri]
 gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
           tauri]
          Length = 233

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T+L V  +  V+ AGD ++S G  ++     K+ ++  G  +   AG +ADA
Sbjct: 19  SPYDNNGGTVLAVAGESYVICAGDTRMSSGYNILTRKFEKIDKM-SGKTLMASAGFAADA 77

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            TL + L+ + +QY  Q  R    +A    +   L         A   +  +        
Sbjct: 78  VTLKKTLKARCKQYEFQNKREIGCVAFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAV 137

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST----------------QNSAEEIARK 164
            T               GSG +  +      + T                +  A ++ + 
Sbjct: 138 FTYDAVGSYERTNYSCQGSGQALIMPVLDNQLKTVSPLVLPAASSATPLSEQEAIDLIKD 197

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
             + AA+  +YT  ++ L  +   
Sbjct: 198 CFATAAERDIYTGDSVELWIMNAE 221


>gi|145484105|ref|XP_001428075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395158|emb|CAK60677.1| unnamed protein product [Paramecium tetraurelia]
          Length = 275

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 11/185 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       +++A D + S+G  +     RKV  + +  ++   AG +AD    L 
Sbjct: 56  HGTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIEINEY-LLGTMAGGAADCQYWLA 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRM------DKYLRNLEAMILIA-DKTITLVITGMGD 126
            L      Y  +        A    +       +        ++   D T   +     D
Sbjct: 115 YLANHCRTYELKNGSKLSVAAASKFLQGILIGYRNSGLSMGCMIAGTDTTGQHLYYIDND 174

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            +  +  + ++GSG +YA            S   A E+  +A+  A      +   + + 
Sbjct: 175 GMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVELGIRAIYHATHRDTASGGVVRVY 234

Query: 184 TLKVG 188
            +   
Sbjct: 235 HIHKD 239


>gi|297626319|ref|YP_003688082.1| 20S proteasome beta-subunit [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922084|emb|CBL56652.1| 20S proteasome beta-subunit [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 288

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            ATTI+ V+    VV+AGD + + G  + + +  KV    +   + G AG++  A  L  
Sbjct: 59  RATTIVAVKYRDGVVMAGDRRATRGHEIAQRDIEKVFAADE-ATLIGVAGAAGMAIDLAR 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
               +L  Y      S     K  R+   +R    M L     + L+             
Sbjct: 118 LYRLELSHYEKLEGASLSFEGKANRLATMIREQLTMALQGFVVVPLLAGWDPHRREGRVV 177

Query: 126 -----DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
                     E+   +IGSG ++A  + + L       +E A    +A+  AAD    T 
Sbjct: 178 SYDATGGHYEESEFASIGSGSAFARGSLKKLHHPDLERDEAALVCIQALFDAADDDSATG 237

Query: 178 H 178
            
Sbjct: 238 G 238


>gi|156547425|ref|XP_001605493.1| PREDICTED: similar to proteasome beta subunit [Nasonia vitripennis]
          Length = 236

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 69/201 (34%), Gaps = 21/201 (10%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                 +  +++ +  D   +IA D ++S G ++     +K+  L + +++ G +G   D
Sbjct: 25  FSPYADNGGSVVALAGDDFSLIAADSRLSAGFSIYTRKQQKLFTLSETSVL-GCSGCWCD 83

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------- 120
             TL   +  +++ Y ++  ++    A    +   L          +  +  +       
Sbjct: 84  ILTLTRVMAARMQMYKHEHHKTMSTPAAAQMLSTMLYYKRFFPYYINNILAGLDEEGKGV 143

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIARKAMS 167
                      +N  +A GS G+         +             T+  A  I +    
Sbjct: 144 IYRYDPVGHCEKNTYVAGGSAGALLQPLLDNQVGYLNQENVEKIPLTKEKALSIVKDVFI 203

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  +YT   I ++ +   
Sbjct: 204 SAAERDIYTGDGINIKIITKD 224


>gi|294953043|ref|XP_002787566.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
           marinus ATCC 50983]
 gi|239902590|gb|EER19362.1| proteasome subunit beta type 5-A precursor, putative [Perkinsus
           marinus ATCC 50983]
          Length = 276

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 68/194 (35%), Gaps = 13/194 (6%)

Query: 1   MVVMGDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
           M +       +  +  TT L    DG V+IA D + S+G  V     RKV  +    +I 
Sbjct: 47  MDMKARSGRLMNFNKGTTTLGFVFDGGVLIAVDSRASMGSYVSSQTVRKVLHITD-RLIG 105

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK---- 115
             AG +AD       L K  + Y  +  +     A    +   + + +   L        
Sbjct: 106 TMAGGAADCQFWERHLGKLCKLYELRNNQRITTAAASKMLANIMYSYKGYGLSCGTMIAG 165

Query: 116 ----TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
               T   +          +N + ++GSG +YA     A      +   A  + ++A+  
Sbjct: 166 YDAVTGPALYMVDDQGTRLKNNMFSVGSGSTYAYGIVDAGYKHDLTLDEAVALGKRAIYH 225

Query: 169 AADICVYTNHNIVL 182
           A +    +   + +
Sbjct: 226 ATNKDGASGGYVRV 239


>gi|195447860|ref|XP_002071403.1| GK25153 [Drosophila willistoni]
 gi|194167488|gb|EDW82389.1| GK25153 [Drosophila willistoni]
          Length = 353

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +  +  V++  D + + G  V   N  K+ RL       G AG++AD   L + 
Sbjct: 50  GTSIVGIIYENGVILGADTRATEGPIVSDKNCSKIHRLQDYIYCCG-AGTAADTEHLTQM 108

Query: 75  LEKKLEQYPNQLLR---SSVELAKDWR--MDKYLRNLEAMILIA--DKTITLVITGMGDV 127
              +L+ +   + R     V  ++  R  + +Y  ++ A +++   DK    +       
Sbjct: 109 TSSELDLHRLNINRERVPVVCASRMMRSTLFRYQGHISAALVMGGVDKAGPQIYCIYPCG 168

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
              +    A+GSG   A+S        Q S +E   + R+A+S      + +  NI +  
Sbjct: 169 SNDKIPYAAMGSGTLAAMSVLEHGWHAQLSLDEGKQLVREAISAGVFNDLGSGSNIDMCV 228

Query: 185 L 185
           +
Sbjct: 229 I 229


>gi|325184015|emb|CCA18472.1| proteasome subunit beta putative [Albugo laibachii Nc14]
          Length = 247

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 75/198 (37%), Gaps = 20/198 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T L +     VVIAGD ++S G +++  N +K+++L   +++A   GS  D 
Sbjct: 38  EPYDFNGGTALAIAGPDYVVIAGDSRLSTGYSILSRNEKKLQQLTSTSVLA-SPGSHNDV 96

Query: 69  FTLLERLEKKLEQYPNQLL--RSSVELAKDWRMDKYLRNLEAMILIA-----DKTITL-V 120
             L   L+ +++ Y +      S+  L++      Y R              DK     V
Sbjct: 97  IQLRGMLQLQIQMYMHDNQAIISTENLSQVLMNTLYSRRFFPYYAFCVLAGIDKDGKGAV 156

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----------TQNSAEEIARKAMSIA 169
            +             A+GSGG   +     L+            TQ   +EI + A   A
Sbjct: 157 YSYDAIGSYDRVSRGAVGSGGHLMIPLLDNLVEHYSRTDPKREFTQQETKEIIKDAFITA 216

Query: 170 ADICVYTNHNIVLETLKV 187
            +  +YT   + + T+  
Sbjct: 217 GERDIYTGDCVEIMTITA 234


>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
 gi|302595755|sp|D3E0A3|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
          Length = 207

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 74/192 (38%), Gaps = 11/192 (5%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +K+       TT + +     VV A + + S+G  V    A K+ ++    I A  AG
Sbjct: 1   MSNKNT---FEGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKIDNH-IAATIAG 56

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM----ILIADKTITL 119
           S ADA TL++ +  +   Y  +  +     A        L +  A     I   D T   
Sbjct: 57  SVADAQTLMKVISAETSLYRLRNGKDISLEAAAAVSSNILHSSPAYVQTLIGGVDDTGAS 116

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
           + +        ++  ++ GSG ++A            +   A E+A +A+  A +   ++
Sbjct: 117 IYSLDAAGGMIKDTFISTGSGSTFAYGVLEDRFYEDITVEEATEVAIRAIKAATERDTFS 176

Query: 177 NHNIVLETLKVG 188
            +  ++  +   
Sbjct: 177 GNGFLVANVTKD 188


>gi|126311312|ref|XP_001381658.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 1 [Monodelphis domestica]
          Length = 244

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 32  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 90

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 91  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 150

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A ++ +   
Sbjct: 151 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLERAMQLVKDVF 210

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT  ++ +  +   
Sbjct: 211 ISAAERDVYTGDSLKICIVTKD 232


>gi|19115456|ref|NP_594544.1| 20S proteasome component beta 2 [Schizosaccharomyces pombe 972h-]
 gi|1346786|sp|Q09841|PSB7_SCHPO RecName: Full=Probable proteasome subunit beta type-7; Flags:
           Precursor
 gi|1039345|emb|CAA91242.1| 20S proteasome component beta 2 [Schizosaccharomyces pombe]
          Length = 267

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     +V+  D + + G  +   N +K+  +      AG AG++AD   +   
Sbjct: 35  GTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAG-AGTAADTEFVTSM 93

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +        +   D     + T      
Sbjct: 94  ISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLGGYDCKGPHLFTIAAHGS 153

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   +A+GSG   A+S              A E+ ++A+   A I   + +  N  L 
Sbjct: 154 SDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIE--AGIFNDLGSGSNCDLV 211

Query: 184 TLKVG 188
            +   
Sbjct: 212 VIDEE 216


>gi|206602968|gb|EDZ39448.1| Putative 20S proteasome beta-subunit [Leptospirillum sp. Group II
           '5-way CG']
          Length = 279

 Score =  110 bits (276), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 17/182 (9%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT+L +     VV+A D Q S G  V     +K+  + + + +A  AG++  A  + 
Sbjct: 55  WHGTTVLALTTRTGVVMAADRQASEGYQVADRAIQKIFPVDRTSAVA-IAGAAGPAIEMA 113

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL---- 128
                ++E Y      +   L K  ++ + +R+   + L     + L             
Sbjct: 114 RLFRVEIEHYEKLEGVALSLLGKANKLGQMVRDHLPLALQGLLVVPLYAGYDTRSGTGRI 173

Query: 129 ---------EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYT 176
                      E+   + GSGG +A +  + L        E    A +A+  AAD  + T
Sbjct: 174 FKYDAAGGRYEEDTFHSNGSGGLFARNVLKMLYHPGMEEAEAVSTALRALYEAADDDLAT 233

Query: 177 NH 178
             
Sbjct: 234 GG 235


>gi|124516169|gb|EAY57677.1| putative 20S proteasome beta-subunit [Leptospirillum rubarum]
          Length = 280

 Score =  110 bits (276), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 17/182 (9%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT+L +     VV+A D Q S G  V     +K+  + + + +A  AG++  A  + 
Sbjct: 56  WHGTTVLALTTRTGVVMAADRQASEGYQVADRAIQKIFPVDRTSAVA-IAGAAGPAIEMA 114

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL---- 128
                ++E Y      +   L K  ++ + +R+   + L     + L             
Sbjct: 115 RLFRVEIEHYEKLEGVALSLLGKANKLGQMVRDHLPLALQGLLVVPLYAGYDTRSGTGRI 174

Query: 129 ---------EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYT 176
                      E+   + GSGG +A +  + L        E    A +A+  AAD  + T
Sbjct: 175 FKYDAAGGRYEEDTFHSNGSGGLFARNVLKMLYRPGMEEAEAVSTALRALYEAADDDLAT 234

Query: 177 NH 178
             
Sbjct: 235 GG 236


>gi|255541320|ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
 gi|223548904|gb|EEF50393.1| proteasome subunit beta type, putative [Ricinus communis]
          Length = 223

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 68/212 (32%), Gaps = 25/212 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  + + +      VIA D ++S G  ++  +  K+ +L + +++A 
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICQLAEKSVMA- 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   L + L+ K   Y +Q  +     A    +   L         A   +  +
Sbjct: 60  SSGFQADVQALQKHLKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYAFNVLGGL 119

Query: 121 --------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
                    T          G  A GSG +  +      +                 ++ 
Sbjct: 120 DSEGKGCVYTYDAVGSYERVGYSAQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEP 179

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            A ++ +   + A +  +YT   + +  L   
Sbjct: 180 EAVDLVKTVFASATERDIYTGDKVEIVVLNAD 211


>gi|225716996|gb|ACO14344.1| Proteasome subunit beta type-7 precursor [Esox lucius]
          Length = 278

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 14/183 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 44  GTTIAGIVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCG-AGVAADAEVTTQM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +   +E +     R  + +    ++ + L   +  I         D T   + +      
Sbjct: 103 MSSNVELHSLSTGRPPLVVTVTRQLKQMLFRYQGHIGSSLIVGGVDVTGAHLYSAYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S              A+++ R A  I A I   + +  N+ L 
Sbjct: 163 YDKLPFLTMGSGAGPAISIFEDRFRPNMELEDAKQLVRDA--IVAGIFCDLGSGSNVDLC 220

Query: 184 TLK 186
            + 
Sbjct: 221 IIT 223


>gi|307192825|gb|EFN75885.1| Proteasome subunit beta type-7 [Harpegnathos saltator]
          Length = 277

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++ GD + +    V    + K+  L       G AG++AD     E 
Sbjct: 39  GTTIAGIVYKDGVILGGDTRATEDTIVADKYSLKIHYLAPNMYCCG-AGTAADTEMTTEM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +   + R       +  + + L   +  I  A      D     +        
Sbjct: 98  IASQLELHRLNIGRIVPVCTANTMIKQMLFRYQGHIGAALVLGGYDLDGPQLYCIFPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             +     +GSG   A++   +      S EE   +   A+       + +  N+ L  +
Sbjct: 158 TEKQKYTTMGSGSLAAMAVFESRWKPDLSEEEAKQLVADAIRAGVFNDLASGSNVDLCII 217

Query: 186 KV 187
           + 
Sbjct: 218 RK 219


>gi|213403021|ref|XP_002172283.1| proteasome subunit beta type-7 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000330|gb|EEB05990.1| proteasome subunit beta type-7 [Schizosaccharomyces japonicus
           yFS275]
          Length = 270

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     +V+  D + + G T+   N  K+  +      AG AG++AD   +   
Sbjct: 38  GTTIVGLIAKDCLVLGADTRATAGPTIADKNCEKLHYISPNIWCAG-AGTAADTEFVTAL 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
               +E +   + R    +     + ++L   +        +   D     + T      
Sbjct: 97  TSSNVELHSMYVNRKPRVITALTLLKQHLFRYQGHIGAYLVLGGYDCQGPHLFTIAAHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   +A+GSG   A+S              A E+ R+A+   A I   + +  N  L 
Sbjct: 157 SDKLPYVALGSGSLAAISVLETKYRPDMERKEAMELVREAIE--AGIFNDLGSGSNCDLV 214

Query: 184 TLKVG 188
            +   
Sbjct: 215 VIDEE 219


>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 210

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 69/195 (35%), Gaps = 12/195 (6%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  K  +  M  TT + +     VVIA D + ++   +    ARKV ++ +       AG
Sbjct: 1   MDQKDISRYMKGTTTVGLVCTDGVVIAADSRATMDTFIASTEARKVWKIDENLG-MTIAG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
              DA  L+  L+ + E Y     +     +    +   L+  + M       +  V  G
Sbjct: 60  LVGDAQELIRILKIQNEIYKMNERKQMSPRSAATLLSIILQENKMMPFYVQLIVGGVEDG 119

Query: 124 MG--------DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
            G             E+   A GSG   AL               A +IA KA+ IA   
Sbjct: 120 KGYVYNLDAAGGYTQESRFTATGSGSLTALGYLEDSYKPGLTTKDAIKIAAKALLIAMQR 179

Query: 173 CVYTNHNIVLETLKV 187
              T +N+ +  +  
Sbjct: 180 DSATGNNMTIAAITS 194


>gi|330886167|gb|EGH20068.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 124

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 64/119 (53%), Positives = 87/119 (73%), Gaps = 1/119 (0%)

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           DAFTL ER E +LE++   L+R++VELAKDWR D+ L  LEAM+ +A+K  +L+ITG GD
Sbjct: 1   DAFTLFERFEAQLEKHQGHLVRAAVELAKDWRTDRSLSRLEAMLAVANKDASLIITGNGD 60

Query: 127 VLEPENGVMAIGSGG-SYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           V+EPE+G++A+GSGG     +A   L+ T  SA EIA  ++ IA DICV+TNHNI +E 
Sbjct: 61  VVEPEDGLIAMGSGGAFAQAAARALLLKTDLSAREIAETSLHIAGDICVFTNHNITIEE 119


>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
 gi|74575802|sp|Q97AZ7|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
 gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
          Length = 211

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +     V++A + +V++   +M  N +K+ ++         AG   DA  L+  
Sbjct: 8   GTTTVGITLTDAVIMATERRVTMENFIMHKNGKKLFQIDTYTG-MTIAGLVGDAQVLVRY 66

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           ++ +LE Y  Q   +    A    +   L  ++ M      ++    T   V +      
Sbjct: 67  MKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTSPHVFSIDAAGG 126

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             E+   + GSG  +      +  + + S +E   +  +A+S A      +   I +  +
Sbjct: 127 SVEDIYASTGSGSPFVYGVLESQYNEKLSIDEGVDLVIRAISAAKQRDSASGGMIDVAVI 186

Query: 186 KVGD 189
              D
Sbjct: 187 TKKD 190


>gi|194750661|ref|XP_001957648.1| GF10515 [Drosophila ananassae]
 gi|190624930|gb|EDV40454.1| GF10515 [Drosophila ananassae]
          Length = 235

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 23/208 (11%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           V        + +  +I+ +  D  VVIA D ++S G  +   +  K+ +L    ++ G  
Sbjct: 17  VQQADFSPYESNGGSIVAIAGDDFVVIAADTRLSSGYNIHSRDQSKLFKLSDQTVL-GST 75

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA-----DK 115
           G  AD  +L   L+ +++ Y +  LR+    A    +    Y R      +       DK
Sbjct: 76  GCWADTLSLTGLLKVRMQGYEHTHLRTMATDAVAQMLSITMYNRRFFPYYVSNILAGIDK 135

Query: 116 TITLVITGMGDVLEPENGVM-AIGSGGSYALSAARA---LMSTQNS-----------AEE 160
               V+     +   E     A G+ G+             +   S           A  
Sbjct: 136 DGKGVVYSYDPIGHCERAFYRAGGTAGTLLQPVLDNQIGHKNINLSSSELPKLTIERAVA 195

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVG 188
           IA      AA+  +YT  ++++  +   
Sbjct: 196 IASDTFISAAERDIYTGDSVLINIITKD 223


>gi|320040045|gb|EFW21979.1| proteasome component [Coccidioides posadasii str. Silveira]
          Length = 277

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPSIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   LE +     R    +     + ++L   +        +   D T   + T      
Sbjct: 88  ISSNLELHALSTGRKPRVITCMTMLKQHLFRYQGYVGAYLVVAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA-EEIARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S    + +   +  + I   + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWTPNLNKGQAIVLASEAIKAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
           +  
Sbjct: 208 EQD 210


>gi|221058827|ref|XP_002260059.1| proteasome subunit beta type 7 precursor [Plasmodium knowlesi
           strain H]
 gi|193810132|emb|CAQ41326.1| proteasome subunit beta type 7 precursor,putative [Plasmodium
           knowlesi strain H]
          Length = 270

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + + G  V   N  K+  + K    AG AG + D       
Sbjct: 41  GTTICGLVCQNAVILGADTRATEGPIVADKNCSKLHYISKNIYCAG-AGVAGDLEHTTLW 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           L+  +E +               R+ + L   +   + A      D T   +        
Sbjct: 100 LQHNVELHRLNTNTQPRVAMCVSRLTQELFKYQGYKVCAIVLGGVDVTGPQLYGIHPHGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++   A      + E   E+  +A  I A I   + +  N+ + 
Sbjct: 160 SCLLPFTALGSGSLSAMAVLEAKYRDNMTIEEGKELVCEA--ICAGIFNDLGSGGNVDIC 217

Query: 184 TLKVG 188
            +   
Sbjct: 218 VITKD 222


>gi|302672727|ref|XP_003026051.1| hypothetical protein SCHCODRAFT_86336 [Schizophyllum commune H4-8]
 gi|300099731|gb|EFI91148.1| hypothetical protein SCHCODRAFT_86336 [Schizophyllum commune H4-8]
          Length = 274

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+       +V+  D + + G  V   N  K+  +       G AG++AD       
Sbjct: 38  GTTIVGCVYKDGIVLGADTRATAGPIVADKNCEKIHYIASNIRCCG-AGTAADTEFTTNL 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +   +E +     R+   +     + + L   +        +   D T   + T      
Sbjct: 97  IASNVEMHALTTGRTPRVVTAMTMLKQMLFRYQGHVGAALVLGGVDPTGAHLFTVAPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A++          + EE +A    +I+A I   + +  N+    +
Sbjct: 157 TDKLPYVTMGSGSLAAMAVFETGWKKDMTREEALALVTAAISAGIFNDLGSGSNVDACVI 216

Query: 186 KVG 188
              
Sbjct: 217 TKD 219


>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
 gi|121724010|sp|Q2FQL8|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Methanospirillum hungatei
           JF-1]
          Length = 209

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 69/196 (35%), Gaps = 14/196 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M ++   +K   TT + +  +  VV+A + + ++G  +    A+K+ ++     +    G
Sbjct: 1   MVEQSDTMK--GTTTVGIVFETGVVLASEKRATMGYLISNKTAKKIYQIAPRIGLTTAGG 58

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKT 116
              DA  L   +  +   Y  +  +     A    +   L                 D+T
Sbjct: 59  -VGDAQQLARLMTVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYVQLLIGGVDET 117

Query: 117 ITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
             ++ +         E+G++A GSG   A        +      SA E+A +A+  A   
Sbjct: 118 GPVLFSVDAVGGTGKEDGIVATGSGSPMAYGVLEDRYTLGMDERSAIELAIRALRSAIKR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   + +  +   
Sbjct: 178 DAGSGEGVAVVVITED 193


>gi|197129775|gb|ACH46273.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 238

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 21/206 (10%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           V   +      +  T+L +  +   ++A D ++S G ++   ++ K  +L +  +I G  
Sbjct: 22  VQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVI-GCT 80

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-- 120
           G   D  TL + +E   E Y +   ++    A    +   L +           I  +  
Sbjct: 81  GFHGDCLTLTKIIEAGGEMYKHSNFKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE 140

Query: 121 ------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIA 162
                  +         +   A GS  +         +  +N             A ++ 
Sbjct: 141 EGKGAVYSFDPVGSYERDNFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLV 200

Query: 163 RKAMSIAADICVYTNHNIVLETLKVG 188
           +     AA+  VYT   + +  +   
Sbjct: 201 KDVFISAAERDVYTGDALKICIVTKD 226


>gi|11498092|ref|NP_069317.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
 gi|17380266|sp|Q9P996|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
          Length = 213

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 12/188 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TT + +     VV+A + + ++G  +    A+K+ ++     +   AGS  DA  L 
Sbjct: 9   YKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTT-AGSVGDAQFLA 67

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
             ++ +   Y  +  R     A        L +      +        D     + +   
Sbjct: 68  RIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDP 127

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIV 181
                 E  ++A GSG   A        + +   + A E+A +A+  A      +   I 
Sbjct: 128 IGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGID 187

Query: 182 LETLKVGD 189
           +  +   +
Sbjct: 188 VVKITEDE 195


>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
           gallopavo]
          Length = 237

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G  +   ++ K  +L +  +I G +G   
Sbjct: 25  RFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYKLTEHTVI-GCSGFHG 83

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 84  DCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 143

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A ++ +   
Sbjct: 144 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDVF 203

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 204 ISAAERDVYTGDALKICVVTKD 225


>gi|145520279|ref|XP_001445995.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413472|emb|CAK78598.1| unnamed protein product [Paramecium tetraurelia]
          Length = 236

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 11/195 (5%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M + +  +  H TT L       +++A D + S+G  +     RKV  + +  ++   AG
Sbjct: 7   MEEINQIIFKHGTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIEINEY-LLGTMAG 65

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM------DKYLRNLEAMILIA-DKT 116
            +AD    L  L      Y  +        A    +       +        ++   D T
Sbjct: 66  GAADCQYWLAYLANHCRTYELKNGSKLSVAAASKFLQGILIGYRNSGLSMGCMIAGTDTT 125

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +     D +  +  + ++GSG +YA            S   A E+  +A+  A    
Sbjct: 126 GQHLYYIDNDGMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVELGVRAIYHATHRD 185

Query: 174 VYTNHNIVLETLKVG 188
             +   + +  +   
Sbjct: 186 TASGGVVRVYHIHKD 200


>gi|115477445|ref|NP_001062318.1| Os08g0529100 [Oryza sativa Japonica Group]
 gi|42407968|dbj|BAD09106.1| putative proteasome subunit beta type 1 [Oryza sativa Japonica
           Group]
 gi|113624287|dbj|BAF24232.1| Os08g0529100 [Oryza sativa Japonica Group]
 gi|215678609|dbj|BAG92264.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640910|gb|EEE69042.1| hypothetical protein OsJ_28037 [Oryza sativa Japonica Group]
          Length = 219

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 66/203 (32%), Gaps = 25/203 (12%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +    + +  T + V      V+A D ++S+G +++  ++ K+  L    ++A  +G   
Sbjct: 3   RFEVYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLA-SSGFQG 61

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D   L   L  K   Y +   +     A    +   L         A   +  +      
Sbjct: 62  DVKALQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKG 121

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIA 162
              T          G  A G+G +  +      +                 +Q+ A ++ 
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDAVTPLSQSDAVDLV 181

Query: 163 RKAMSIAADICVYTNHNIVLETL 185
           +   + A +  +YT   + +  +
Sbjct: 182 KDVFASATERDIYTGDKLEIVVI 204


>gi|126304880|ref|XP_001373799.1| PREDICTED: similar to N-acetylated alpha-linked acidic dipeptidase
           2 [Monodelphis domestica]
          Length = 273

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 39  GTTIAGLVFQEGVILGSDTRATEDSVVADKNCEKIHFIAPNIYCCG-AGVAADAEMTTQI 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           L   +E +     R          + + L   +  I         D T   + +      
Sbjct: 98  LASNMELHALSTNRKPRVATVTRMLRQMLFRYQGHIGASLIIGGMDVTGPHLYSVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A+S          + EE   +  +A++  A I   + +  N+ + 
Sbjct: 158 YSHILFTAMGSGQGPAISVLEDRFKPNMTLEEGQKLVVEAVT--AGILEDLGSGSNVDVC 215

Query: 184 TLKVG 188
            +   
Sbjct: 216 VITQD 220


>gi|124513322|ref|XP_001350017.1| proteasome subunit beta type 7 precursor, putative [Plasmodium
           falciparum 3D7]
 gi|23615434|emb|CAD52425.1| proteasome subunit beta type 7 precursor, putative [Plasmodium
           falciparum 3D7]
          Length = 270

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 14/195 (7%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G K    +   TTI  +     V++  D + + G  V   N  K+  + K    AG AG 
Sbjct: 31  GVKFPQFRKTGTTICGLVCQNAVILGADTRATEGPIVADKNCSKLHYISKNIWCAG-AGV 89

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTIT 118
           + D       L+  +E +               R+ + L   +   + A      D    
Sbjct: 90  AGDLEHTTLWLQHNVELHRLNTNTQPRVSMCVSRLTQELFKYQGYKVCAIVLGGVDVNGP 149

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--C 173
            +               A+GSG   A++   A      + EE   +  +A  I A I   
Sbjct: 150 QLYGIHPHGSSCLLPFTALGSGSLNAMAVLEAKYRDNMTIEEGKNLVCEA--ICAGIFND 207

Query: 174 VYTNHNIVLETLKVG 188
           + +  N+ +  +   
Sbjct: 208 LGSGGNVDICVITKD 222


>gi|66512107|ref|XP_395163.2| PREDICTED: proteasome subunit beta type-1 [Apis mellifera]
          Length = 236

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 64/202 (31%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                  +  +++ +  D   VIA D ++S G ++     +K+  L    ++ G +G   
Sbjct: 24  NFNPYADNGGSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLFPLSSKTVL-GCSGCWC 82

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL   L  +++ Y ++  +     A    +   L             +  +      
Sbjct: 83  DTLTLTRILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKG 142

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARA--LMS----------TQNSAEEIARKAM 166
              +             A GS G+                       TQ  A  I +   
Sbjct: 143 CVYSYDPIGHCEITKYRAGGSAGALLQPLLDNQIGYKNQEGVESVPLTQERAVAIIKDVF 202

Query: 167 SIAADICVYTNHNIVLETLKVG 188
           + AA+  +YT  +I ++ +   
Sbjct: 203 TSAAERDIYTGDSIFIKIITSD 224


>gi|315050414|ref|XP_003174581.1| proteasome component PUP1 [Arthroderma gypseum CBS 118893]
 gi|311339896|gb|EFQ99098.1| proteasome component PUP1 [Arthroderma gypseum CBS 118893]
          Length = 275

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKIHYIAPSIWCAG-AGTAADTEFTTNL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   +E +     R+         + ++L   +  I         D T T + T      
Sbjct: 88  ISSNIELHSLSTGRAPRVATCMTMLKQHLFRYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S   ++     + +E  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFESMWKPSLTKDEAIKLTSEAIEAGIWNDLGSGSNVDVCVM 207

Query: 186 KVG 188
           + G
Sbjct: 208 EKG 210


>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
          Length = 237

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   +S    A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLNQEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRICIVTKE 225


>gi|226292223|gb|EEH47643.1| proteasome component PUP1 [Paracoccidioides brasiliensis Pb18]
          Length = 276

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDAGVVIAADTRATSGPIVADKNCEKLHYITPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     RS   +     + ++L   +  I         D T   + T      
Sbjct: 88  MSSNLELHALSTGRSPRVVTCLTMLKQHLFRYQGHIGAYLVVAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S    +   + + +E  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWKPELNKDEAVKLCSEAILAGIFNDLGSGSNVDVCII 207

Query: 186 KVG 188
              
Sbjct: 208 HKE 210


>gi|225193025|dbj|BAH29646.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 11/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G     +K   TTI  V     VV+  D + +  + V      K+  +       G AG+
Sbjct: 23  GQTPKPMKT-GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGT 80

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTIT 118
           +AD     + L   L  +     R+   +     +   L           ++   D T  
Sbjct: 81  AADTEKTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGN 140

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            + T        +   +A+GSG   AL               A+E+ R A+ +     + 
Sbjct: 141 HLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHVGIMSDLG 200

Query: 176 TNHNIVLETLKVG 188
           + +NI +  +   
Sbjct: 201 SGNNIDICVITKQ 213


>gi|168046797|ref|XP_001775859.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672866|gb|EDQ59398.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 275

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 14/196 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            G K    +   TTI+ +     V++  D + + G+ V   N  K+  L       G AG
Sbjct: 29  QGAKLPKYRKTGTTIVGLVYKDGVILGADTRATEGEIVCDKNCEKIHYLAPNIYCCG-AG 87

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTI 117
           ++AD   + + +  +L  +     R S  +     +  +L   +        +   D T 
Sbjct: 88  TAADTENVTDMVSSQLALHRYATGRDSRVVTALTMIKTHLFRYQGHVSAALVLGGVDVTG 147

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI-- 172
             +                +GSG   A+S   +      + E   EI   A  I A I  
Sbjct: 148 PHLHAIYPHGSTDTLPFATMGSGSLAAMSVFESRYKENLTREEGMEIVSAA--ICAGIFN 205

Query: 173 CVYTNHNIVLETLKVG 188
            + +  N+ L  +   
Sbjct: 206 DLGSGSNVDLCIITKE 221


>gi|225192968|dbj|BAH29688.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G     +K   TTI  V     VV+  D + +  + V      K+  +       G AG+
Sbjct: 23  GQTPKPMKT-GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGT 80

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTIT 118
           +AD     + L   L  +     R+   +     +   L           ++   D T  
Sbjct: 81  AADTEKTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGN 140

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            + T        +   +A+GSG   AL               A+E+ R A+       + 
Sbjct: 141 HLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLG 200

Query: 176 TNHNIVLETLKVG 188
           + +NI +  +   
Sbjct: 201 SGNNIDICVITKQ 213


>gi|188519587|gb|ACD57532.1| ATP-dependent protease HslV [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 145

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 80/146 (54%), Positives = 111/146 (76%), Gaps = 3/146 (2%)

Query: 42  MKANARKVRRLG-KGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD 100
           MK NARKVRRLG +G ++AGFAG++ADAFTL E  E KL+++  QL R++VELAKDWR +
Sbjct: 1   MKGNARKVRRLGREGQVLAGFAGAAADAFTLFELFEAKLDKH-GQLTRAAVELAKDWRTE 59

Query: 101 KYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGG-SYALSAARALMSTQNSAE 159
           + L  LEA++ +ADK  +L+I+G GDV+EPE+G++AIGSGG     +A   L  T+  A+
Sbjct: 60  RRLGKLEALLAVADKETSLIISGTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAK 119

Query: 160 EIARKAMSIAADICVYTNHNIVLETL 185
            IA +A++IA DIC+YTN N+V+E L
Sbjct: 120 TIATEAINIAGDICIYTNRNVVVEEL 145


>gi|225707182|gb|ACO09437.1| Proteasome subunit beta type 1-A [Osmerus mordax]
          Length = 237

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYSFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   ++    A    +   L             I  +     
Sbjct: 83  GDCPTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEQGR 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVQHLPLSQEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRICIITKE 225


>gi|225681076|gb|EEH19360.1| proteasome subunit beta type 7 [Paracoccidioides brasiliensis Pb03]
          Length = 276

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDAGVVIAADTRATSGPIVADKNCEKLHYITPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     RS   +     + ++L   +  I         D T   + T      
Sbjct: 88  MSSNLELHALSTGRSPRVVTCLTMLKQHLFRYQGHIGAYLVVAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S    +   + + +E  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWKPELNKDEAVKLCSEAILAGIFNDLGSGSNVDVCII 207

Query: 186 KVG 188
              
Sbjct: 208 HKE 210


>gi|39945094|ref|XP_362084.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145021494|gb|EDK05623.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 271

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    +G VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFEGGVVIAADTRATSGPIVADKNCEKLHYISPQIWCAG-AGTAADTEFTTAI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +  I         D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTMLKQHLFQYQGHIGAYLVVAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS-AEEIARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S       ++   A+ I   + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWQSKLDEAQAIKLCSDAIQAGIWNDLGSGSNVDVAVI 207

Query: 186 KVG 188
              
Sbjct: 208 TAD 210


>gi|302810458|ref|XP_002986920.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
 gi|300145325|gb|EFJ12002.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
          Length = 226

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + +  T + +      ++A D ++SLG +++     K+ +L    ++A  +G  AD 
Sbjct: 12  SPYENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMA-SSGFQADV 70

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            TL + LE + + Y +Q  +          +   L         +   +  +        
Sbjct: 71  RTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCV 130

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARK 164
            T          G    GSG    +      +                 T+  A EI + 
Sbjct: 131 YTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEALEIVKD 190

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
             + A +  +YT   + +  +   
Sbjct: 191 TFASATERQIYTGDGLEIVVINKD 214


>gi|3114277|pdb|1RYP|I Chain I, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114291|pdb|1RYP|W Chain W, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513420|pdb|1G65|H Chain H, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513434|pdb|1G65|V Chain V, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513999|pdb|1G0U|H Chain H, A Gated Channel Into The Proteasome Core Particle
 gi|11514013|pdb|1G0U|V Chain V, A Gated Channel Into The Proteasome Core Particle
 gi|20150384|pdb|1JD2|H Chain H, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150391|pdb|1JD2|O Chain O, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|75765707|pdb|1Z7Q|I Chain I, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765721|pdb|1Z7Q|W Chain W, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|93279375|pdb|2F16|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279389|pdb|2F16|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279663|pdb|2FNY|H Chain H, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279677|pdb|2FNY|V Chain V, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032209|pdb|2FAK|H Chain H, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032223|pdb|2FAK|V Chain V, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490850|pdb|2GPL|H Chain H, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490864|pdb|2GPL|V Chain V, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016374|pdb|3D29|H Chain H, Proteasome Inhibition By Fellutamide B
 gi|190016388|pdb|3D29|V Chain V, Proteasome Inhibition By Fellutamide B
 gi|197725328|pdb|3E47|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725342|pdb|3E47|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939219|pdb|3DY3|H Chain H, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939233|pdb|3DY3|V Chain V, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939247|pdb|3DY4|H Chain H, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939261|pdb|3DY4|V Chain V, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828244|pdb|3GPJ|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828258|pdb|3GPJ|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588328|pdb|3GPT|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588342|pdb|3GPT|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588356|pdb|3GPW|H Chain H, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588370|pdb|3GPW|V Chain V, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588550|pdb|3HYE|H Chain H, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588564|pdb|3HYE|V Chain V, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|298508230|pdb|1VSY|I Chain I, Proteasome Activator Complex
 gi|298508244|pdb|1VSY|W Chain W, Proteasome Activator Complex
 gi|298508446|pdb|3L5Q|M Chain M, Proteasome Activator Complex
 gi|298508460|pdb|3L5Q|Y Chain Y, Proteasome Activator Complex
 gi|330689388|pdb|3MG4|H Chain H, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689402|pdb|3MG4|V Chain V, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 222

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ V+ +  VVIA D + + G  V   N  K+ R+      AG AG++AD   + + +
Sbjct: 1   TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAG-AGTAADTEAVTQLI 59

Query: 76  EKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLE 129
              +E +     R    ++        + KY  ++ A +++A  D T + + +       
Sbjct: 60  GSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGST 119

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETLK 186
                +++GSG   A++   +      + EE  +  + +I A I   + +  N+ +  ++
Sbjct: 120 DVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVME 179

Query: 187 VGDE 190
           +G +
Sbjct: 180 IGKD 183


>gi|225192963|dbj|BAH29690.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225192974|dbj|BAH29684.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225192980|dbj|BAH29680.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225192998|dbj|BAH29628.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193010|dbj|BAH29636.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193046|dbj|BAH29660.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193052|dbj|BAH29664.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G     +K   TTI  V     VV+  D + +  + V      K+  +       G AG+
Sbjct: 23  GQTPKPMKT-GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGT 80

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTIT 118
           +AD     + L   L  +     R+   +     +   L           ++   D T  
Sbjct: 81  AADTEKTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGN 140

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            + T        +   +A+GSG   AL               A+E+ R A+       + 
Sbjct: 141 HLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLG 200

Query: 176 TNHNIVLETLKVG 188
           + +NI +  +   
Sbjct: 201 SGNNIDICVITKQ 213


>gi|312218053|emb|CBX97999.1| similar to proteasome subunit beta type 7 precursor [Leptosphaeria
           maculans]
          Length = 276

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHFISPQIWCAG-AGTAADTEFTTAI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGCDPTGAHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA-RKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S        + S E+     A +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKGEMSREDAVTLCANAIEAGIWNDLGSGSNVDVAVI 207

Query: 186 KVG 188
              
Sbjct: 208 TQE 210


>gi|195396599|ref|XP_002056918.1| GJ16628 [Drosophila virilis]
 gi|194146685|gb|EDW62404.1| GJ16628 [Drosophila virilis]
          Length = 304

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  V   N  K+ RL       G AG++AD   +   
Sbjct: 44  GTSIVGIVYQNGVILGADTRATEGPIVSDKNCSKIHRLQDHIFCCG-AGTAADTEQMTLM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+ +     R    +     + + L   +        +   DK    V        
Sbjct: 103 TSAELDLHGLNTDRQVPVVCASMMLRRTLFRYQGHISAALVMGGVDKYGPHVNCIHPYGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A++      S        +++ R+A+S      + +  NI L  +
Sbjct: 163 IDKLPYAAMGSGTLAAMAVLERGWSPSLDLDQGKQLVREAISAGVFNDLGSGSNIDLCVI 222

Query: 186 KVG 188
              
Sbjct: 223 TPN 225


>gi|126465830|ref|YP_001040939.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
 gi|302595722|sp|A3DN21|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
          Length = 213

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 11/183 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T+L ++    VVIAG+ +++    V+  N RKV  + K   I GFAG   DA  ++  L
Sbjct: 18  GTVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGI-GFAGLVGDAQFIIRAL 76

Query: 76  EKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITGMGDVL 128
             + E Y  QL R      LAK   +  Y   L  ++        D+    +        
Sbjct: 77  RMEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGPQIYVLDPVGS 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E+  +A+GSGG  AL               AE++A  A+  A +    +   + +  +
Sbjct: 137 LIEDKYVALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVSGDGVDVLRI 196

Query: 186 KVG 188
              
Sbjct: 197 TEE 199


>gi|225192995|dbj|BAH29626.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193043|dbj|BAH29658.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G     +K   TTI  V     VV+  D + +  + V      K+  +       G AG+
Sbjct: 23  GQTPKPMKT-GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGT 80

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTIT 118
           +AD     + L   L  +     R+   +     +   L           ++   D T  
Sbjct: 81  AADTEKTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGN 140

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            + T        +   +A+GSG   AL               A+E+ R A+       + 
Sbjct: 141 HLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLG 200

Query: 176 TNHNIVLETLKVG 188
           + +NI +  +   
Sbjct: 201 SGNNIDICVITKQ 213


>gi|296420550|ref|XP_002839832.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636038|emb|CAZ84023.1| unnamed protein product [Tuber melanosporum]
          Length = 278

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 68/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHFISPQIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +LE +     R    +     + ++L   +        I   D T T + T      
Sbjct: 88  ISSQLELHSLSTGRKPRVVTCMTLLKQHLFRYQGHIGAYLVIAGVDPTGTHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA-RKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A++          + EE     + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMAVFETKWEKSLTREEAVDLCSEAILAGIFNDLGSGSNVDVCVI 207

Query: 186 KVG 188
              
Sbjct: 208 TSE 210


>gi|240275780|gb|EER39293.1| proteasome component [Ajellomyces capsulatus H143]
          Length = 276

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     RS   +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNLELHALSTGRSPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S    +         A ++  +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWKPSLNQDDAVKLCSEAIK--AGIFNDLGSGSNVDVC 205

Query: 184 TLKVG 188
            +   
Sbjct: 206 VVHKE 210


>gi|195135135|ref|XP_002011990.1| GI16713 [Drosophila mojavensis]
 gi|193918254|gb|EDW17121.1| GI16713 [Drosophila mojavensis]
          Length = 235

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 23/203 (11%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               + +  +I+ +  D  VVIA D ++S G ++   +  K+  +    ++ G  G   D
Sbjct: 22  FSPYESNGGSIVAIAGDDFVVIAADTRLSSGYSIHSRDQSKLFEMSPKTVL-GSTGCWCD 80

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA-----DKTITL- 119
             +L   ++ +++ Y +  L++    A    +    Y R      +       DK     
Sbjct: 81  TLSLTGLVKVRMQMYEHTHLKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGA 140

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARAL---MSTQNS-----------AEEIARKA 165
           V +             A GS G+             +   S           A  +A   
Sbjct: 141 VYSYDPIGHCERATYRAGGSAGALLQPVLDNQIGYKNQNLSLDQLPPLTKERAVAVASDT 200

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  +YT  ++++  +   
Sbjct: 201 FISAAERDIYTGDSVLINIITAD 223


>gi|302845116|ref|XP_002954097.1| hypothetical protein VOLCADRAFT_109919 [Volvox carteri f.
           nagariensis]
 gi|300260596|gb|EFJ44814.1| hypothetical protein VOLCADRAFT_109919 [Volvox carteri f.
           nagariensis]
          Length = 269

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     VV+  D + + G TV   N  K+  +       G AG++AD   + + 
Sbjct: 33  GTTIAGLIFKDGVVLGADTRSTSGSTVADKNCSKIHFITPNIYACG-AGTAADLEHVTDM 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  ++  +     R +  +       ++L   +        +   D     + T      
Sbjct: 92  VSGQIALHRYATGRQARVITAMTMFKQHLFKYQGHVGAALVLGGVDLNGPHLFTIYPHGS 151

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
                   +GSG   A++   A          A  +  +A+       + +  N+ L  +
Sbjct: 152 TDSLPFATMGSGSVNAMAMFEAYYKDDMDRGEAMALVARAIRSGVMNDLGSGSNVDLCVI 211

Query: 186 KVG 188
              
Sbjct: 212 TKE 214


>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
 gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
          Length = 217

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 66/205 (32%), Gaps = 18/205 (8%)

Query: 1   MVVMGD--------KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL 52
           MV M +        K+    +  TT + +     VV+A D + S G  V     RK+  +
Sbjct: 1   MVKMNNFIEPDTPSKNSIKILKGTTTVGLVAKDSVVLAADRRASAGFFVANKMVRKIVYI 60

Query: 53  GKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNL 106
                +   AGS AD   +   ++           R       +  L       KY   L
Sbjct: 61  DDRIGMTT-AGSVADLQFIYNYMKNIYHYNVISGNRPVTVKSLATYLTNVLSQSKYFPYL 119

Query: 107 EAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IAR 163
             +++    T   +          E   +A GSG   A+           S EE   +  
Sbjct: 120 VQILIGGYDTQPRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYRPDLSGEEAMDLGA 179

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
           +A+  A     +T   +++  L   
Sbjct: 180 RAVLSAIKRDSFTGTGVIVTKLSKD 204


>gi|308160078|gb|EFO62585.1| Proteasome subunit beta type 5 precursor [Giardia lamblia P15]
          Length = 294

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 58/186 (31%), Gaps = 12/186 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +     G +++A D + + GQ V     +KV  +    I+   AG + D      
Sbjct: 81  HGTTTIAFCFRGGILLAVDSRSTQGQFVSSGVVQKVIEITPH-ILGTIAGVAGDCQFWER 139

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--------TITLVITGMG 125
            L +K   Y  +        +        L +     +                +     
Sbjct: 140 DLGRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDSTNHPCIYYCDS 199

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +       +   GSG ++A          + + E+   + +KA+  A      +   + +
Sbjct: 200 EGTRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNV 259

Query: 183 ETLKVG 188
             ++  
Sbjct: 260 YVIRPN 265


>gi|225563200|gb|EEH11479.1| proteasome component [Ajellomyces capsulatus G186AR]
 gi|325093149|gb|EGC46459.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 276

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     RS   +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNLELHALSTGRSPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S    +         A ++  +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWKPSLNQDDAVKLCSEAIK--AGIFNDLGSGSNVDVC 205

Query: 184 TLKVG 188
            +   
Sbjct: 206 VVHKE 210


>gi|301117144|ref|XP_002906300.1| proteasome subunit beta type-7, putative [Phytophthora infestans
           T30-4]
 gi|262107649|gb|EEY65701.1| proteasome subunit beta type-7, putative [Phytophthora infestans
           T30-4]
          Length = 289

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 66/184 (35%), Gaps = 20/184 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI        VV+  D + + G  VM  N  K+  +       G AG++AD       
Sbjct: 52  GTTI------DGVVLGADTRSTGGSIVMDKNCEKIHYIAPNIYCCG-AGTAADTENTTAL 104

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +LE +       S  +     + + L   +        +   D T   + T      
Sbjct: 105 ISSQLELHRLNTDTQSRVVTAMTLLKRMLFQYQGHVSAALVLGGVDITGPHLYTIYPHGS 164

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S              A+++ ++A+   A I   + +  N+ + 
Sbjct: 165 TDKLPFVTMGSGSLAAMSVFEHGYKDDMTEDDAKKLVQEAIL--AGIFNDLGSGSNVDVT 222

Query: 184 TLKV 187
           T+K 
Sbjct: 223 TIKK 226


>gi|330921364|ref|XP_003299395.1| hypothetical protein PTT_10371 [Pyrenophora teres f. teres 0-1]
 gi|311326978|gb|EFQ92531.1| hypothetical protein PTT_10371 [Pyrenophora teres f. teres 0-1]
          Length = 276

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYIAPQIWCAG-AGTAADTEFTTAI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGAHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA-RKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S          + E+     A +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWKADLTREDAVTLCANAIEAGIWNDLGSGSNVDVAVI 207

Query: 186 KVG 188
              
Sbjct: 208 TEE 210


>gi|224473816|gb|ACN49157.1| proteasome subunit beta type 10 [Oryzias dancena]
          Length = 275

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G     +K   TTI  V     VV+  D + +  + V      K+  +       G AG+
Sbjct: 32  GHPPKPMKT-GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGT 89

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTIT 118
           +AD     + L   L  +     R+   +     +   L           ++   D T  
Sbjct: 90  AADTEKTTDLLSSNLTIFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGN 149

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            + T        +   +A+GSG   AL               A+++ R A+       + 
Sbjct: 150 HLYTVGPYGSVNKVPYLAMGSGELAALGVLEDGFKHDLELEKAKKLVRDAVHAGIMSDLG 209

Query: 176 TNHNIVLETLKVG 188
           + +NI +  +   
Sbjct: 210 SGNNIDICVITAE 222


>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
 gi|302595813|sp|B9LTS6|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
          Length = 243

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 67/182 (36%), Gaps = 9/182 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++    VV+A D + SLG  V   + +KV  +     +   AGS + A  L+  
Sbjct: 49  GTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGAL-TIAGSVSAAQNLIST 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVLE 129
           L+ +   Y  +  +     A        LR+    I+       D   + + +       
Sbjct: 108 LKAETSLYETRRGKDMSMEALSTLTGNLLRSGAFYIVQPILGGVDDEGSHIYSIDALGGT 167

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLK 186
            E      GSG  YAL           +   A+ +A KA+  A +  + + + I +  + 
Sbjct: 168 TEEEYTVTGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERDLASGNGINVAVVT 227

Query: 187 VG 188
             
Sbjct: 228 DD 229


>gi|225192942|dbj|BAH29702.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|79315846|ref|NP_001030905.1| PBF1; peptidase/ threonine-type endopeptidase [Arabidopsis
           thaliana]
 gi|332646592|gb|AEE80113.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
          Length = 223

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 69/212 (32%), Gaps = 25/212 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  T + +      VIA D ++S G +++  +  K+ +L    +++ 
Sbjct: 1   MTKQHANWSPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLS- 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   L + L+ +   Y +Q  +     A    +   L         A   +  +
Sbjct: 60  SSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGL 119

Query: 121 --------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
                    T          G  A GSG +  +      +                 ++ 
Sbjct: 120 DEEGKGCVFTYDAVGSYERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEA 179

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            A ++ +   + A +  +YT + + +  LK  
Sbjct: 180 EAVDLVKTVFASATERDIYTVNKLEIMILKAD 211


>gi|154281653|ref|XP_001541639.1| proteasome component Pup1 [Ajellomyces capsulatus NAm1]
 gi|150411818|gb|EDN07206.1| proteasome component Pup1 [Ajellomyces capsulatus NAm1]
          Length = 276

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYITPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     RS   +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNLELHALSTGRSPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S    +         A ++  +A+   A I   + +  N+ + 
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWKPSLNQDDAVKLCSEAIK--AGIFNDLGSGSNVDVC 205

Query: 184 TLKVG 188
            +   
Sbjct: 206 VVHKE 210


>gi|225193073|dbj|BAH29678.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|253745395|gb|EET01350.1| Proteasome subunit beta type 5 precursor [Giardia intestinalis ATCC
           50581]
          Length = 294

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 58/184 (31%), Gaps = 12/184 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +     G +++A D + + GQ V     +KV  +    I+   AG + D      
Sbjct: 81  HGTTTVAFCFRGGILLAVDSRSTQGQFVSSGVVQKVIEITPH-ILGTIAGVAGDCQFWER 139

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--------TITLVITGMG 125
            L +K   Y  +        +        L +     +                +     
Sbjct: 140 DLGRKCRLYELENGERIYASSASKLFISTLHSQSGTDMSVGAMISGFDSTNHPCIYYCDS 199

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +       +   GSG ++A          + + E+   + +KA+  A      +   + +
Sbjct: 200 EGTRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNI 259

Query: 183 ETLK 186
             ++
Sbjct: 260 YVIR 263


>gi|225192948|dbj|BAH29698.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193022|dbj|BAH29644.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193031|dbj|BAH29650.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193061|dbj|BAH29670.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|14488813|pdb|1FNT|I Chain I, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488827|pdb|1FNT|W Chain W, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|178847467|pdb|2ZCY|H Chain H, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847481|pdb|2ZCY|V Chain V, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847509|pdb|3BDM|H Chain H, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847523|pdb|3BDM|V Chain V, Yeast 20s Proteasome:glidobactin A-Complex
          Length = 232

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ V+ +  VVIA D + + G  V   N  K+ R+      AG AG++AD   + + +
Sbjct: 1   TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAG-AGTAADTEAVTQLI 59

Query: 76  EKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLE 129
              +E +     R    ++        + KY  ++ A +++A  D T + + +       
Sbjct: 60  GSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGST 119

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETLK 186
                +++GSG   A++   +      + EE  +  + +I A I   + +  N+ +  ++
Sbjct: 120 DVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVME 179

Query: 187 VGDE 190
           +G +
Sbjct: 180 IGKD 183


>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
 gi|302595717|sp|A2BN24|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
          Length = 204

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 12/187 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + +R  G VV+A + +VS G  ++   ARKV ++     +A  AG  AD   + + 
Sbjct: 8   GATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLA-LAGLFADLQAISKI 66

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGMGD 126
           L  ++E Y     R     A    +   L + +    +++  +          +      
Sbjct: 67  LRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVMDPL 126

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E+   AIGSG   A+       S   S   A+++A  A+  A +    +   I L 
Sbjct: 127 GSLIEDDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDAMSGDGIDLL 186

Query: 184 TLKVGDE 190
            ++  ++
Sbjct: 187 VIRREED 193


>gi|58220851|dbj|BAB83847.2| PSMB10 [Oryzias latipes]
 gi|295901496|dbj|BAJ07260.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|295901530|dbj|BAJ07282.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|295901532|dbj|BAJ07283.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 275

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 41  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 100 LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 160 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 219

Query: 186 KVG 188
              
Sbjct: 220 TKQ 222


>gi|15790018|ref|NP_279842.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
 gi|10580444|gb|AAG19322.1| proteasome, subunit alpha [Halobacterium sp. NRC-1]
          Length = 255

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 66/183 (36%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMK-ANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTI+ +     V++A D + SLG  V+   N +KV  +     ++  +GS   A + + 
Sbjct: 60  GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALS-ISGSVGGAQSFIR 118

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-----NLEAMILIADKTITLVITGMGDVL 128
            L  +   Y  +        A        LR      +  ++   D     V +      
Sbjct: 119 SLRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFRVVPILGGVDDDGGHVFSLDPAGS 178

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
              +   A GSG  YAL       S       AE++A  A+  A++    + + I +  +
Sbjct: 179 SMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASGNGIHITKI 238

Query: 186 KVG 188
              
Sbjct: 239 THD 241


>gi|225193001|dbj|BAH29630.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193016|dbj|BAH29640.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|225192971|dbj|BAH29686.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|224473833|gb|ACN49172.1| antigen processing proteasome-associated protein [Oryzias
           luzonensis]
          Length = 275

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 41  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 100 LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 160 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 219

Query: 186 KVG 188
              
Sbjct: 220 TKQ 222


>gi|225716016|gb|ACO13854.1| Proteasome subunit beta type-1-A [Esox lucius]
          Length = 237

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   +S    A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKALQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRICIVTKD 225


>gi|225192977|dbj|BAH29682.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193013|dbj|BAH29638.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193034|dbj|BAH29652.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193037|dbj|BAH29654.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193040|dbj|BAH29656.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193049|dbj|BAH29662.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193064|dbj|BAH29672.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193067|dbj|BAH29674.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|225192945|dbj|BAH29700.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|159109800|ref|XP_001705163.1| Proteasome subunit beta type 5 precursor [Giardia lamblia ATCC
           50803]
 gi|157433243|gb|EDO77489.1| Proteasome subunit beta type 5 precursor [Giardia lamblia ATCC
           50803]
          Length = 294

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 58/184 (31%), Gaps = 12/184 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +     G +++A D + + GQ V     +KV  +    I+   AG + D      
Sbjct: 81  HGTTTIAFCFRGGILLAVDSRSTQGQFVSSGVVQKVIEITPH-ILGTIAGVAGDCQFWER 139

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--------TITLVITGMG 125
            L +K   Y  +        +        L +     +                +     
Sbjct: 140 DLGRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDSTNHPCIYYCDS 199

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           +       +   GSG ++A          + + E+   + +KA+  A      +   + +
Sbjct: 200 EGTRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHAVSRDAMSGGMLNV 259

Query: 183 ETLK 186
             ++
Sbjct: 260 YVIR 263


>gi|225193007|dbj|BAH29634.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|211939905|gb|ACJ13433.1| proteasome subunit beta 1 [Helicoverpa armigera]
          Length = 232

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 63/201 (31%), Gaps = 21/201 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  +I+ +  D   VI  D ++S G ++     +K+ +L    ++ G  G   
Sbjct: 20  RFEPYADNGGSIVAIAGDDFAVIGADTRLSTGFSIYTREQKKLFKLSDKTVL-GATGCWC 78

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL   L  +++ Y ++  +S    A    +   L             +  +      
Sbjct: 79  DTLTLTRLLSARMQMYEHEHNKSMSTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDADGKG 138

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIARKAM 166
              +         +   A GS G+         +              +  A  + +   
Sbjct: 139 CVYSYDPIGHCERSNYRAGGSAGAQLQPLLDNQIGLKNMQNVTEAPIPKEKALALLKDVF 198

Query: 167 SIAADICVYTNHNIVLETLKV 187
             AA+  +YT   I +  +  
Sbjct: 199 ISAAERDIYTGDCIYILIITA 219


>gi|254581944|ref|XP_002496957.1| ZYRO0D12034p [Zygosaccharomyces rouxii]
 gi|238939849|emb|CAR28024.1| ZYRO0D12034p [Zygosaccharomyces rouxii]
          Length = 261

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 77/185 (41%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ D  VVIA D + + G  V   N  K+ R+      AG AG++AD   + + 
Sbjct: 29  GTTIVGVKYDKGVVIAADTRSTQGPIVADKNCAKLHRMAPRIWCAG-AGTAADTEAVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     R    ++    + ++L   +  I         D T   + +      
Sbjct: 88  IGSNLELHSQYANREPRVVSALQMLKQHLFRYQGHIGAYLIVAGVDPTGAHLFSVQAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
                 +++GSG   A++   +      + +E  +  + +I A I   + +  N+ +  +
Sbjct: 148 TDVGHYLSLGSGSLAAMATLESNWKQNLTKDEAVKLASDAIQAGIWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           +VG +
Sbjct: 208 EVGKD 212


>gi|225705124|gb|ACO08408.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
          Length = 277

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  V     VV+  D + + G+ V      K+  +       G AG++AD 
Sbjct: 38  KPMKT-GTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADT 95

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
               + L   L  +     R+   +     +   L           ++   D T   + T
Sbjct: 96  EKTTDLLSSNLTIFSMNSGRNPRVVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYT 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +A+GSG   AL               A+++ R A+       + + +N
Sbjct: 156 VGPYGSIDNVPYLAMGSGDLAALGILEDRFKPNMELEEAKQLVRDAIHSGIMSDLGSGNN 215

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 216 IDICVITKQ 224


>gi|195016569|ref|XP_001984439.1| GH16458 [Drosophila grimshawi]
 gi|193897921|gb|EDV96787.1| GH16458 [Drosophila grimshawi]
          Length = 235

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 71/203 (34%), Gaps = 23/203 (11%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               + +  +I+ +  +  VVIA D ++S G ++   +  K+ +L    ++ G  G   D
Sbjct: 22  FSPYESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKLSPHTVL-GSTGCWCD 80

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA-----DKTITL- 119
             +L   ++ +++ Y +  +++    A    +    Y R      +       DK     
Sbjct: 81  TLSLTGLMKVRMQMYEHTHMKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGV 140

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARA--LMSTQNSAEE------------IARKA 165
           V +             A G+ GS              QN A +            +A   
Sbjct: 141 VYSYDPIGHCERATYRAGGTAGSLLQPVLDNQIGYKNQNLAADQLPPLTKDRAVSVASDT 200

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  +YT  ++++  +   
Sbjct: 201 FISAAERDIYTGDSVLINIITKD 223


>gi|148362120|gb|ABQ59647.1| PSMB10 [Salmo salar]
 gi|209735636|gb|ACI68687.1| Proteasome subunit beta type-7 precursor [Salmo salar]
 gi|223646744|gb|ACN10130.1| Proteasome subunit beta type-7 precursor [Salmo salar]
 gi|223672599|gb|ACN12481.1| Proteasome subunit beta type-7 precursor [Salmo salar]
 gi|262189355|gb|ACY30373.1| PSMB10 [Salmo salar]
          Length = 277

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  V     VV+  D + + G+ V      K+  +       G AG++AD 
Sbjct: 38  KPMKT-GTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADT 95

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
               + L   L  +     R+   +     +   L           ++   D T   + T
Sbjct: 96  EKTTDMLSSNLTIFSMTSGRNPRVVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYT 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +A+GSG   AL               A+E+ R A+       + + +N
Sbjct: 156 VGPYGSIDNVPYLAMGSGDLAALGILEDRFKPNMELEEAKELVRDAIHSGIMSDLGSGNN 215

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 216 IDICVITKQ 224


>gi|225192986|dbj|BAH29620.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225192992|dbj|BAH29624.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|315518859|dbj|BAJ51758.1| proteasome subunit, beta type 10 [Oryzias celebensis]
          Length = 261

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 27  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 86  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 145

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 146 VNKVPYLAMGSGDLAALGILEDGFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 205

Query: 186 KVG 188
              
Sbjct: 206 TKQ 208


>gi|297527490|ref|YP_003669514.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
           12710]
 gi|297256406|gb|ADI32615.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
           12710]
          Length = 210

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 12/184 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D + + G  V     +K+ R+    I    +G  ADA  + E+ 
Sbjct: 12  TTTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRIDDY-IAMTISGLVADAEIIAEQA 70

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADKTITLVITGMGDV 127
                +Y  +L R          +   L          ++ ++   D     +       
Sbjct: 71  RFIARKYKLELGRPIKVSGLASNLSIILNTYLRASPYIVQLLLGGYDNNGPHLFYMDLYG 130

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E   MA GSG   A         +  S   A+E+A KA+S A     ++   + +  
Sbjct: 131 SLSEEKYMATGSGSPTAFGVLEEGYRSDLSLEEAKELAFKAVSAATRRDGFSGEGVDIVV 190

Query: 185 LKVG 188
           +   
Sbjct: 191 IGPD 194


>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
 gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
          Length = 237

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G  +   ++ K  RL +  +I G +G   
Sbjct: 25  RFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYRLTEQTVI-GCSGFHG 83

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 84  DCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 143

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A ++ +   
Sbjct: 144 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDVF 203

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 204 ISAAERDVYTGDALKICVVTKD 225


>gi|300786771|ref|YP_003767062.1| proteasome beta subunit [Amycolatopsis mediterranei U32]
 gi|299796285|gb|ADJ46660.1| proteasome beta subunit [Amycolatopsis mediterranei U32]
          Length = 284

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 66/186 (35%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+       V+IAGD + + G  +   +  KV    + + + G AG++  A  ++ 
Sbjct: 52  HGTTIVACTFASGVLIAGDRRATSGNLIASRDIEKVHVTDEYSAV-GIAGTAGLAVEMVR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +L  Y      S     K  ++   ++    M +     I L +            
Sbjct: 111 LYAVELAHYEKIEGVSLSLDGKTNKLAGMVKANLEMAMAGLAAIPLFVGYDLEAEDAKHA 170

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
                    G   E   G   IGSG  +A SA + L         A  +A +A+  AAD 
Sbjct: 171 GRIVSYDAAGGRYEENGGYAGIGSGSLFAKSALKKLHDPDADVEGAVRVAVEALYDAADD 230

Query: 173 CVYTNH 178
              +  
Sbjct: 231 DTASGG 236


>gi|209880259|ref|XP_002141569.1| proteasome subunit beta type 7-B precursor [Cryptosporidium muris
           RN66]
 gi|209557175|gb|EEA07220.1| proteasome subunit beta type 7-B precursor, putative
           [Cryptosporidium muris RN66]
          Length = 282

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+  D + + G  V   +  K+ RL      AG AG++AD   +   
Sbjct: 42  GTTIVGVVCKECVVLGADTRATNGPIVADKDCDKIHRLADNIYAAG-AGTAADLDHVTSM 100

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +E KLE    Q+ R              +  Y   + A +++A  D T   +        
Sbjct: 101 IEGKLELLRLQMNRQPRVSNAVSMFSRHLYPYQGYIGAHLIVAGSDITGNYIYQVSNYGS 160

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             ++  +++GSG   A +   +      + +   E+   A+       +Y+  N+ +  +
Sbjct: 161 IMQHPYVSMGSGSLSATTVLESGYRDGLNQDEGTELVASAIRAGIYNDLYSGSNVNILII 220

Query: 186 KVGD 189
              D
Sbjct: 221 TSKD 224


>gi|302814429|ref|XP_002988898.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
 gi|300143235|gb|EFJ09927.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
          Length = 226

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + +  T + +      ++A D ++SLG +++     K+ +L    ++A  +G  AD 
Sbjct: 12  SPYENNGGTCVAIAGLDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAVMA-SSGFQADV 70

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            TL + LE + + Y +Q  +          +   L         +   +  +        
Sbjct: 71  RTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLGGLDTEGKGCV 130

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARK 164
            T          G    GSG    +      +                 T+  A EI + 
Sbjct: 131 YTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYPPRETATPLTEQEALEIVKD 190

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
             + A +  +YT   + +  +   
Sbjct: 191 TFASATERQIYTGDGLEIVVINKD 214


>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
           evestigatum Z-7303]
 gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
           evestigatum Z-7303]
          Length = 211

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 64/187 (34%), Gaps = 12/187 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     VV+A + + ++G  +    A+K+ ++     +   AGS  DA  ++
Sbjct: 8   LKGTTTVGIACSDAVVLATERRATMGNFIASKTAKKIYQIDDRIGMTT-AGSVGDAQQIV 66

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             +  + + +  +             +   L       L+        DKT   + +   
Sbjct: 67  RIISVESKLFKMRRNEPITIKGITTLLSNLLSGQRYFPLMVQLIVGGVDKTGPNMYSLDP 126

Query: 126 DVLEPEN-GVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIV 181
                E   ++A GSG                +++   E+A +A+  A      +   I 
Sbjct: 127 LGGRIEETNIVATGSGSPITYGLLEDRYHKDMTSDEGAELAIRALHNAMKRDSASGDGID 186

Query: 182 LETLKVG 188
           +  +   
Sbjct: 187 VVVITKD 193


>gi|217034383|ref|ZP_03439798.1| hypothetical protein HP9810_889g28 [Helicobacter pylori 98-10]
 gi|216943178|gb|EEC22648.1| hypothetical protein HP9810_889g28 [Helicobacter pylori 98-10]
          Length = 143

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 63/141 (44%), Positives = 95/141 (67%), Gaps = 2/141 (1%)

Query: 47  RKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
           +K+R L    +++GFAGS+ADAF+L +  E+ LE     L +S V+ +K+WR DKYLR L
Sbjct: 3   QKIRSLYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRL 62

Query: 107 EAMILIADKTITLVITGMGDVLE-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARK 164
           EAM+++ +     +++G GDVLE  +N + AIGSGG++ALSAARAL S       ++  +
Sbjct: 63  EAMMIVLNLDHIFILSGTGDVLEAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEE 122

Query: 165 AMSIAADICVYTNHNIVLETL 185
           ++ IA D+C+YTN NI +  L
Sbjct: 123 SLKIAGDLCIYTNTNIKILEL 143


>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 247

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 64/202 (31%), Gaps = 20/202 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           ++      +A T+  +     V++AGD ++S G +++  +  K+ RL     +A  +G  
Sbjct: 34  NEFNPYVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLAT-SGMY 92

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTI 117
           AD   L ++L  +L  Y     + +   A    + + L                  DK  
Sbjct: 93  ADFAALSKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDDKGE 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-------STQNSAEE----IARKAM 166
            LVI               +GSG                     Q    E          
Sbjct: 153 GLVINYDAVGSGDFKKYAVLGSGAQLITPVFDQYFEGYNKIKKEQLHTVEEFISFIVDCF 212

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             A +  +YT   + +  L+  
Sbjct: 213 ESATERDIYTGDQLEIVILRKD 234


>gi|169622693|ref|XP_001804755.1| hypothetical protein SNOG_14573 [Phaeosphaeria nodorum SN15]
 gi|160704831|gb|EAT78113.2| hypothetical protein SNOG_14573 [Phaeosphaeria nodorum SN15]
          Length = 276

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 68/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYISPHIWCAG-AGTAADTEFTTAI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     R    +     + ++L   +  I         D T   + T      
Sbjct: 88  ISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGAHLFTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S       +  S ++  +  A +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETQWQSNLSRDDAIKLCANAIEAGIWNDLGSGSNVDVAVI 207

Query: 186 KVG 188
              
Sbjct: 208 TNE 210


>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
          Length = 237

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   V+A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYSFNGGTVLAVAGEDFAVVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   +     A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRICIVTKD 225


>gi|330835873|ref|YP_004410601.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
 gi|329568012|gb|AEB96117.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
          Length = 196

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 12/182 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + V+    +++    ++S G  V+  +A+KV  + +  I  G AG   D   L   + 
Sbjct: 7   TAVGVKVQDGIILGAVRRLSYGGYVLSKSAKKVFPIARFGI--GGAGLFGDLQALTRIMN 64

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLE 129
             ++ Y     R     A    +   L   + M  I        D     +         
Sbjct: 65  ANIKYYELYNNRPISTKAAAKLLSIILYQYKYMPFISEVLFGGVDDGQPQLYVLDPLGSL 124

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETLK 186
            ++   A+GSG   ++    A  +   +    +E+  K++  +A+  V +   I + T+ 
Sbjct: 125 LDDVYAAVGSGARVSIGVLEAEYNESMTLMQGKELTIKSLRASAERDVTSGDGIDILTIS 184

Query: 187 VG 188
             
Sbjct: 185 RD 186


>gi|160331715|ref|XP_001712564.1| prsB7 [Hemiselmis andersenii]
 gi|159766013|gb|ABW98239.1| prsB7 [Hemiselmis andersenii]
          Length = 245

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 68/191 (35%), Gaps = 10/191 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
             +++K   TTI  +     +++A D + + G+ +   N  K+  +       G AG+SA
Sbjct: 34  SFFSIKKTGTTICGMVFKHGILLASDTRATNGEIICDTNCEKIHFIAPNICCCG-AGTSA 92

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLV 120
           D   + + L  +LE       R +          K L   +  +  A      D   + +
Sbjct: 93  DTENITKLLSNQLELQRISSGRETNIQTAISICQKILFQHKGFLSAALIFGGFDFFGSNL 152

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                     +   +++GSG   A++          S +E   I ++++         + 
Sbjct: 153 FCIHPHGSSEKIPYISMGSGSLAAMAVLDNNYKNNLSLKEAVLIIQESIKAGIYNDTGSG 212

Query: 178 HNIVLETLKVG 188
            ++ L  L   
Sbjct: 213 GSLDLCILTKK 223


>gi|59275969|dbj|BAD89555.1| proteasome subunit [Oncorhynchus mykiss]
          Length = 277

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  +     VV+  D + + G+ V      K+  +       G AG++AD 
Sbjct: 38  KPMKT-GTTIAGIVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADT 95

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
               + L   L  +     R+   +     +   L           ++   D T   + T
Sbjct: 96  EKTTDLLSSNLTIFSMNSGRNPRVVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYT 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +A+GSG   AL               A+++ R A+       + + +N
Sbjct: 156 VGPYGSIDNVPYLAMGSGDLAALGILEDRFKPNMELEEAKQLVRDAIHSGIMSDLGSGNN 215

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 216 IDICVITKQ 224


>gi|156086762|ref|XP_001610788.1| proteasome subunit beta 7 [Babesia bovis T2Bo]
 gi|154798041|gb|EDO07220.1| proteasome subunit beta 7, putative [Babesia bovis]
          Length = 271

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+A D + + G  V   N  K+ R+      AG AG +AD       
Sbjct: 40  GTTICGVLVKDGVVLAADTRATEGPIVADKNCSKLHRISDFIYCAG-AGVAADLEHTTLW 98

Query: 75  LEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           LE  +E     L            L  +    +  +    ++   D     + +      
Sbjct: 99  LENNIELLRLNLKQKPKVQMCVSMLVHELFKYQGYKQCALILGGYDSKGPHLFSISPRGS 158

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   +      S   A  +A KA+S  A I   + +  N+ + 
Sbjct: 159 SDSLPFCTMGSGSLNAMSVLESEYRDGMSISEAVALATKAIS--AGILNDLGSGGNVDVC 216

Query: 184 TLKVG 188
            +   
Sbjct: 217 VINRD 221


>gi|327311458|ref|YP_004338355.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
 gi|326947937|gb|AEA13043.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
          Length = 199

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 11/183 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + ++    VV+A D +V+ G  +      K+ ++ +  + A  +G  AD   LL  L
Sbjct: 2   TTTVGIKARDGVVLATDKRVTAGYYIAHKRGEKIWKIDEH-VAATMSGGVADLQGLLSTL 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVL 128
                 Y  +  R              L     +I I        D     +        
Sbjct: 61  TILARDYKTEHRRPIPVKTLVNYASLLLFYSRPVIYIVHSIFGGFDDEGPQLYMLDWLGS 120

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E   ++ GSG  YA+           +   A ++A  A+  A      +   I + T+
Sbjct: 121 YSEERYISTGSGSPYAMGVLEVGYREDMTVDEAVKLAENAVKAAMRNDPGSGEGIDIVTI 180

Query: 186 KVG 188
              
Sbjct: 181 TKD 183


>gi|315518871|dbj|BAJ51766.1| proteasome subunit, beta type 10 [Oryzias matanensis]
          Length = 261

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 27  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 86  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 145

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 146 VNKVPYLAMGSGDLAALGILEDGFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 205

Query: 186 KVG 188
              
Sbjct: 206 TKQ 208


>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
 gi|74550648|sp|Q8PZ04|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
          Length = 210

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 12/187 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + V     +V+A + + ++G  +    A+KV ++    +    AGS  DA  L+
Sbjct: 7   LKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDD-LVGMTTAGSVGDAQQLV 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             +  + + Y  +   S         M  +L       ++        DK    + +   
Sbjct: 66  RLVSVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNGPAIYSLDP 125

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIV 181
                 E  + A GSG   A            + +E   +A +A+  A      +  NI 
Sbjct: 126 MGGSIEETRISATGSGSPMAYGVLEDQYREDIAVKEGLDLAIRAIHNATKRDSASGENID 185

Query: 182 LETLKVG 188
           +  +   
Sbjct: 186 VVVITKE 192


>gi|195927408|pdb|3C91|H Chain H, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927409|pdb|3C91|I Chain I, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927410|pdb|3C91|J Chain J, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927411|pdb|3C91|K Chain K, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927412|pdb|3C91|L Chain L, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927413|pdb|3C91|M Chain M, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927414|pdb|3C91|N Chain N, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927422|pdb|3C91|V Chain V, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927423|pdb|3C91|W Chain W, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927424|pdb|3C91|X Chain X, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927425|pdb|3C91|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927426|pdb|3C91|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927427|pdb|3C91|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927428|pdb|3C91|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927436|pdb|3C92|H Chain H, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927437|pdb|3C92|I Chain I, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927438|pdb|3C92|J Chain J, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927439|pdb|3C92|K Chain K, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927440|pdb|3C92|L Chain L, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927441|pdb|3C92|M Chain M, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927442|pdb|3C92|N Chain N, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927450|pdb|3C92|V Chain V, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927451|pdb|3C92|W Chain W, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927452|pdb|3C92|X Chain X, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927453|pdb|3C92|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927454|pdb|3C92|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927455|pdb|3C92|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927456|pdb|3C92|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|262368054|pdb|3JRM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368055|pdb|3JRM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368056|pdb|3JRM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368057|pdb|3JRM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368058|pdb|3JRM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368059|pdb|3JRM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368060|pdb|3JRM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368080|pdb|3JSE|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368081|pdb|3JSE|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368082|pdb|3JSE|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368083|pdb|3JSE|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368084|pdb|3JSE|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368085|pdb|3JSE|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368086|pdb|3JSE|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368101|pdb|3JTL|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368102|pdb|3JTL|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368103|pdb|3JTL|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368104|pdb|3JTL|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368105|pdb|3JTL|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368106|pdb|3JTL|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368107|pdb|3JTL|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
          Length = 203

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     V++A + +V++   +M  N +K+ ++         AG   DA  L+  +
Sbjct: 1   TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTG-MTIAGLVGDAQVLVRYM 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVLE 129
           + +LE Y  Q   +    A    +   L  ++ M      ++    T   V +       
Sbjct: 60  KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGS 119

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLK 186
            E+   + GSG  +      +  S + + +E   +  +A+S A      +   I +  + 
Sbjct: 120 VEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVIT 179

Query: 187 VGD 189
             D
Sbjct: 180 RKD 182


>gi|195375426|ref|XP_002046502.1| GJ12457 [Drosophila virilis]
 gi|194153660|gb|EDW68844.1| GJ12457 [Drosophila virilis]
          Length = 235

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 71/203 (34%), Gaps = 23/203 (11%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               + +  +I+ +  +  VVIA D ++S G ++   +  K+ ++    ++ G  G   D
Sbjct: 22  FSPYESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKMSPKTVL-GSTGCWCD 80

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA-----DKTITL- 119
             +L   ++ +++ Y +  +++    A    +    Y R      +       DK     
Sbjct: 81  TLSLTGLVKVRMQMYEHTHMKTMSTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGA 140

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARAL---MSTQNSAEEI-----------ARKA 165
           V +             A G+ G+             +    A+++           A   
Sbjct: 141 VYSYDPIGHCERATYRAGGTAGALLQPVLDNQIGYKNQNLPADQLPPLTKERAVAVASDT 200

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  +YT  ++++  +   
Sbjct: 201 FISAAERDIYTGDSVLINIITKD 223


>gi|17508495|ref|NP_493271.1| Proteasome Beta Subunit family member (pbs-2) [Caenorhabditis
           elegans]
 gi|3874965|emb|CAB16855.1| C. elegans protein C47B2.4, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 277

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 74/198 (37%), Gaps = 10/198 (5%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M  MG K   +    TTI+ V   G +V+  D + + G  +   +  KV +L +     G
Sbjct: 32  MCKMGGKAPKLTSTGTTIVAVAFKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACG 91

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIA--D 114
            AG++AD   + + L   L        R +  +         +  Y   + A +LI   D
Sbjct: 92  -AGTAADLDQVTKMLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVD 150

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
            T   +     +         A GSG   A++          +   AE++ ++A+     
Sbjct: 151 PTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKLVQRALEAGMH 210

Query: 172 ICVYTNHNIVLETLKVGD 189
               + +++ L  ++  +
Sbjct: 211 GDNASGNSLNLVIIEPSE 228


>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 236

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 23  HRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVI-GCSGFH 81

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   +S    A    +   L             I  +     
Sbjct: 82  GDCLTLTKIIDARLKMYKHSNNKSMTSGAIAATLSTILYGRRFFPYYVYNIIGGLDEEGK 141

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +             A GS  +         +                 A ++ +  
Sbjct: 142 GAVYSFDPVGSYQRGTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLNQEKAVQLVKDV 201

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 202 FISAAERDVYTGDALRICIVTKE 224


>gi|145548529|ref|XP_001459945.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427772|emb|CAK92548.1| unnamed protein product [Paramecium tetraurelia]
          Length = 230

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       +++A D + S+G  +     RKV  + +  ++   AG +AD    L 
Sbjct: 11  HGTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIEINEY-LLGTMAGGAADCQYWLA 69

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRM------DKYLRNLEAMILIA-DKTITLVITGMGD 126
            L      Y  +        A    +       K        ++   D +   +     D
Sbjct: 70  YLANHCRTYELKNGSKLSVAAASKFLQGILIGYKNSGLSMGCMIAGTDLSGQHLYYIDND 129

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
            +  +  + ++GSG +YA            S   A E+  +A+  A      +   + +
Sbjct: 130 GMRLKGDIFSVGSGSTYAYGVLDNHYRYDLSLNEAVELGVRAIYHATHRDTASGGVVRV 188


>gi|300706486|ref|XP_002995504.1| hypothetical protein NCER_101573 [Nosema ceranae BRL01]
 gi|239604639|gb|EEQ81833.1| hypothetical protein NCER_101573 [Nosema ceranae BRL01]
          Length = 227

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 9/182 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +  V++  D + + G  V   N  K+  + +     G AG+S D   +  +
Sbjct: 6   GTTIVGVKFNNGVILCADTRSTSGPIVADKNCEKIHYITENIQACG-AGTSGDITRVTRK 64

Query: 75  LEKKL----EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
             K+L    ++Y      +         +  Y  ++ A ++I   D T   +        
Sbjct: 65  ASKELSIFNKKYNKIPRVAHCVRTCQLHLHPYQGHISAALVIGGVDDTGFYLYEVYPHGS 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI--CVYTNHNIVLETLK 186
                  A+GSG   A+S   A     +  E I     +I A I   +Y+  NI +  + 
Sbjct: 125 SNSVSYTALGSGSLAAISILEAGYKNMDMEEAINLACNAIEAGILNDLYSGSNIDVCVIT 184

Query: 187 VG 188
             
Sbjct: 185 SE 186


>gi|315518877|dbj|BAJ51770.1| proteasome subunit, beta type 10 [Oryzias marmoratus]
          Length = 261

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 27  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 86  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 145

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 146 VNKVPYLAMGSGDLAALGILEDGFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 205

Query: 186 KVG 188
              
Sbjct: 206 TKQ 208


>gi|289742321|gb|ADD19908.1| 20S proteasome regulatory subunit beta type PSMB1/PRE7 [Glossina
           morsitans morsitans]
          Length = 236

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 24/203 (11%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               + +  +I+ +  +   VIA D ++S G T+   N  K+ +L    ++ G  G   D
Sbjct: 22  FQPYESNGGSIVAIAGNDFAVIAADSRLSSGYTIHTRNENKLFQLSSNAVL-GSTGCWCD 80

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------- 120
              L   ++ +++ Y +   ++    A    +   + N           +  +       
Sbjct: 81  TLALTALVKARMQMYEHTHSKTMSTDATAQMLSILMYNRRFFPYYVSNVLAGLNSEGKGV 140

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARA---LMSTQNS------------AEEIARK 164
             +        ++   A GS G+           L + +              A  IA  
Sbjct: 141 VYSYDPIGHFEKSNSRAGGSAGALLQPVLDNQIGLKNIKMEHIGFPAELTKERAVAIASD 200

Query: 165 AMSIAADICVYTNHNIVLETLKV 187
           A   A +  +YT  ++ +  +  
Sbjct: 201 AFISATERDIYTGDSVQINIITK 223


>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
           11548]
 gi|302595741|sp|A3MS44|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|126248370|gb|ABO07461.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
           11548]
          Length = 201

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 12/185 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D +V+ G  +      K+ ++    + A  +G  AD  ++L  L
Sbjct: 2   TTTVGIVAKDGVVLATDKRVTAGYYIAHKAGEKIWKIDDH-VAATMSGGVADLQSVLSFL 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGDV 127
             +  +Y  +  R     A    +   L      I +          +   ++       
Sbjct: 61  SLRAREYRVEHKRPIPIRALVNYVSLLLFYSRPYIYLVHSIVGGVDAEEGPVLYMVDWLG 120

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +   +A GSG  YA  A         +   A E+A +A+  A      +   I + T
Sbjct: 121 TVTKEKYIATGSGSPYAKGALEVAYREDLTIDEAVELAIRAVKAAIRNDPGSGEGIDVVT 180

Query: 185 LKVGD 189
           +   D
Sbjct: 181 ITKSD 185


>gi|169235741|ref|YP_001688941.1| proteasome beta subunit [Halobacterium salinarum R1]
 gi|302595858|sp|B0R4C8|PSB_HALS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|302595910|sp|Q9HR36|PSB_HALSA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|167726807|emb|CAP13593.1| proteasome beta subunit [Halobacterium salinarum R1]
          Length = 243

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 66/183 (36%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMK-ANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTI+ +     V++A D + SLG  V+   N +KV  +     ++  +GS   A + + 
Sbjct: 48  GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALS-ISGSVGGAQSFIR 106

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-----NLEAMILIADKTITLVITGMGDVL 128
            L  +   Y  +        A        LR      +  ++   D     V +      
Sbjct: 107 SLRAEANLYEARRGEYMSIDALSTMASNLLRGGPFFRVVPILGGVDDDGGHVFSLDPAGS 166

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
              +   A GSG  YAL       S       AE++A  A+  A++    + + I +  +
Sbjct: 167 SMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASGNGIHITKI 226

Query: 186 KVG 188
              
Sbjct: 227 THD 229


>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
 gi|121732295|sp|Q9YER0|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
          Length = 219

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 10/180 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +     V++A D + + G  +     +K+  L    +    +G  ADA  L + 
Sbjct: 25  GTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNY-VAMTVSGLVADAQILSDV 83

Query: 75  LEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           L +++  Y             +  L+      K+   +  +I+    T   + T      
Sbjct: 84  LREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQPRLYTLDLFGS 143

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             E+   A GSG   A            S EE   +A  A+  A      +     +  +
Sbjct: 144 ITEDKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASGDGADVVVI 203


>gi|195043591|ref|XP_001991649.1| GH12772 [Drosophila grimshawi]
 gi|193901407|gb|EDW00274.1| GH12772 [Drosophila grimshawi]
          Length = 300

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +  D  V++  D + + G  V   N  K+ RL +     G AG++AD   +   
Sbjct: 44  GTSIVGIIFDDGVILGADTRATEGPIVSDKNCSKIHRLQEHIFCCG-AGTAADTEQMTLV 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              +L+       R    +     + + L   +        +   DK    +        
Sbjct: 103 TSAELDLQELNTNRQVPVICASMLLRRTLFRYQGHISAALVMGGVDKYGPHINCIHPCGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +    A+GSG   A+S            E   ++ R+A++      + +  NI L  +
Sbjct: 163 IDKIPYAAMGSGTLAAMSVLEHGWQPTLDLEQGKQLVREAITAGVLNDLGSGSNIDLCVI 222

Query: 186 KVG 188
              
Sbjct: 223 TRN 225


>gi|159489510|ref|XP_001702740.1| 20S proteasome beta subunit B, type beta 2 [Chlamydomonas
           reinhardtii]
 gi|158280762|gb|EDP06519.1| 20S proteasome beta subunit B, type beta 2 [Chlamydomonas
           reinhardtii]
          Length = 270

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     VV+  D + + G TV   N  K+  +       G AG++AD   + + 
Sbjct: 34  GTTIAGLIFKDGVVLGADTRSTSGSTVADKNCSKIHYITPNIYACG-AGTAADLEHVTDM 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +L  +     R++  +       ++L   +  +  A      D     + T      
Sbjct: 93  VSGQLALHRYATGRNARVITAMTMFKQHLFKYQGHVGAALVLGGYDINGPHLFTIYPHGS 152

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
                   +GSG   A++   A          A E+  K +       + +  N+ L  +
Sbjct: 153 TDSLPFATMGSGSLNAMAMFEAYYKDDMNRAEAMELVAKGIRSGVLNDLGSGSNVDLCVI 212

Query: 186 KVG 188
              
Sbjct: 213 TKD 215


>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
 gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
 gi|74557429|sp|Q980L4|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595697|sp|D0KRX1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
 gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
           solfataricus 98/2]
          Length = 196

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + ++ +  +V+A + ++S G  V+   A+KV ++     +   AG   D  TL   + 
Sbjct: 7   TAVGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKI--NKFLMAGAGIYGDLQTLTRIMN 64

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLE 129
            +++ Y     +     A    +   L   + M  I        D+    +         
Sbjct: 65  VEIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQLYVLDPIGSL 124

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLK 186
            E+   A+GSG   A+    +      S   A ++  KA+  + +  + +   I L  + 
Sbjct: 125 IEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITSGDGIDLAIID 184

Query: 187 VG 188
             
Sbjct: 185 KK 186


>gi|332796484|ref|YP_004457984.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
 gi|332694219|gb|AEE93686.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
          Length = 196

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 12/181 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + ++ +  V++A + ++S G  V+  +A+KV  +G+  I     G   D   L   + 
Sbjct: 7   TAVGIKLNDGVILAAERRLSYGGYVLSKSAKKVHIIGRFGIAGA--GLFGDLQALTRIMN 64

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-------ILIADKTITLVITGMGDVLE 129
            +++ Y     +     A    +   L   + M           D  I  +         
Sbjct: 65  AEIKYYELYNEKPISTKAAAKLLSIILYQYKYMPFISEILFAGVDNGIPQLYVLDPLGSL 124

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETLK 186
            ++   A+GSG   A+    A           +EIA K++  + +  V +   I +  L 
Sbjct: 125 LDDVYAAVGSGARVAIGVLEAEYDQNMPLDKGKEIAIKSIKASIERDVTSGDGIDILILD 184

Query: 187 V 187
            
Sbjct: 185 K 185


>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 237

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL E ++ +L+ Y +   +     A    +   L             I  +     
Sbjct: 83  GDCLTLTEIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRICIVTKD 225


>gi|315518868|dbj|BAJ51764.1| proteasome subunit, beta type 10 [Oryzias matanensis]
          Length = 261

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 27  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 86  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 145

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 146 VNKVPYLAMGSGDLAALGILEDAFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 205

Query: 186 KVG 188
              
Sbjct: 206 TKQ 208


>gi|225192954|dbj|BAH29696.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLQLEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|327262119|ref|XP_003215873.1| PREDICTED: proteasome subunit beta type-1-like [Anolis
           carolinensis]
          Length = 239

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 65/206 (31%), Gaps = 21/206 (10%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
            M  +      +  TIL +  +   ++A D ++S    V   ++ K  +L    +I G +
Sbjct: 23  AMQRRFSPYTFNGGTILAIAGEDFSIVASDTRLSEDYAVHSRDSPKCYKLTDTTVI-GCS 81

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-- 120
           G   D  TL + +E +L+ Y +   +     A    +   L +           I  +  
Sbjct: 82  GFHGDCLTLTKIIEARLKMYKHSNNKIMSAGAIAAMLSTILYSRRFFPYYVYNIIGGLDE 141

Query: 121 ------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIA 162
                  +         +   A GS  +         +             T   A ++ 
Sbjct: 142 EGKGAVYSFDPVGSYQRDTFKAGGSASAMLQPLLDNQVGLKNMQNVQQVSLTLEKALQLV 201

Query: 163 RKAMSIAADICVYTNHNIVLETLKVG 188
           +     AA+  VYT   + +  +   
Sbjct: 202 KDVFISAAERDVYTGDALKICIITKD 227


>gi|315518880|dbj|BAJ51772.1| proteasome subunit, beta type 10 [Oryzias marmoratus]
          Length = 261

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 27  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 86  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 145

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 146 VNKVPYLAMGSGDLAALGILEDGFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 205

Query: 186 KVG 188
              
Sbjct: 206 TKQ 208


>gi|225704042|gb|ACO07867.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 237

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   +     A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRICIVTKD 225


>gi|229367758|gb|ACQ58859.1| Proteasome subunit beta type-7 precursor [Anoplopoma fimbria]
          Length = 268

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     E 
Sbjct: 40  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYIAPNIYCCG-AGTAADTEKTTEL 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           L   L  +     R+   +         + +Y   + A +++   D T   + T      
Sbjct: 99  LSSNLTIFSLNSGRNPRVVMAVNILQDTLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 158

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 159 VNKTPYLAMGSGDLAALGILEDGYKPDLELDKAKELVRVAIHAGIMNDLGSGNNIDICVI 218

Query: 186 KVG 188
              
Sbjct: 219 TRE 221


>gi|225705074|gb|ACO08383.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 237

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   +     A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRICIVTKD 225


>gi|195483797|ref|XP_002090437.1| GE12802 [Drosophila yakuba]
 gi|194176538|gb|EDW90149.1| GE12802 [Drosophila yakuba]
          Length = 246

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 68/186 (36%), Gaps = 11/186 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +     G +++  D + + G+ +   + +KV ++ +  ++   AG +AD      
Sbjct: 34  HGTTTVGFVYQGGIILCVDSRTTSGKFIGSQSLQKVVQVIQY-MLGTMAGGAADCTYWDR 92

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------TITLVITGMGD 126
            L ++   +  +        +    +       + M L             + ++    D
Sbjct: 93  ALTRECRLHELRYKERLPVRSAARFICNVAAEYKGMGLCMGMMLAGWSPEGSSLVYVDSD 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            L     V A+GSG S AL           S   A ++A +A+  A    +++   + L 
Sbjct: 153 GLRLHGKVFAVGSGASNALGILDTDYRLDLSDNEAYDLAFRAVYHATMRDIFSGGLVRLY 212

Query: 184 TLKVGD 189
            +   +
Sbjct: 213 HIDQDN 218


>gi|331697108|ref|YP_004333347.1| proteasome subunit beta [Pseudonocardia dioxanivorans CB1190]
 gi|326951797|gb|AEA25494.1| proteasome, beta subunit [Pseudonocardia dioxanivorans CB1190]
          Length = 287

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 67/186 (36%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ +     VVIAGD + + G  + + +  KV      + + G AGS+  A  ++ 
Sbjct: 59  HGTTIVALVCADGVVIAGDRRATAGNVIAQRDIEKVFVTDSYSAV-GIAGSAGIALEMVR 117

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
                LE Y            K  ++   +R      +     + L +            
Sbjct: 118 LFTVDLEHYEKIEGVPLSLDGKANKLAGMVRQNLGAAMQGFVVVPLFVGYDTDAPDASKA 177

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQNS-AEEI--ARKAMSIAADI 172
                    G   +   G  ++GSG  +A SA + L    N  A  I  A +A+  AAD 
Sbjct: 178 GRIVTYDPTGGRYDEWLGYYSVGSGSVFAKSALKKLHDPANDLATTIRTAVEALYDAADD 237

Query: 173 CVYTNH 178
              T  
Sbjct: 238 DTATGG 243


>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
 gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
           (Silurana) tropicalis]
 gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
           (Silurana) tropicalis]
          Length = 239

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L +  D   ++A D ++S G ++   N  K  +L    +I G  G  
Sbjct: 26  QRFNPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDNTVI-GCTGFH 84

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
           AD  TL + +E +L+ Y +   ++    A    +   L +           I  +     
Sbjct: 85  ADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGK 144

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARA--LMSTQNS----------AEEIARKA 165
               +         +   A GS  +                +          A ++ +  
Sbjct: 145 GAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEQLPLTLEKALKLIKDV 204

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 205 FISAAERDVYTGDALHISIVTKD 227


>gi|149744029|ref|XP_001499422.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 1 [Equus caballus]
          Length = 241

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 65/202 (32%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYAFNGGTILAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNSAEE----------IARKAM 166
              +         +   A GS  +                + E           + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMGLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|82594228|ref|XP_725335.1| proteasome subunit, beta type, 7 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23480306|gb|EAA16900.1| proteasome subunit, beta type, 7 [Plasmodium yoelii yoelii]
          Length = 270

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + + G  V   N  K+  + K    AG AG + D       
Sbjct: 41  GTTICGIVCQNAVILGADTRATEGPIVADKNCSKLHYISKNIYCAG-AGVAGDLEHTTLW 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           L+  +E +               R+ + L   +   + A      D T   +        
Sbjct: 100 LQHNVELHRLNTKTQPRVAMCVSRLTQELFKYQGYKVCAIVLGGVDVTGPQLYGIHPHGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++   A      + E   E+  +A  I A I   + +  N+ + 
Sbjct: 160 SCLLPFTALGSGSLNAMTVLEAKYRDNMTIEEGKELVCEA--ICAGIFNDLGSGGNVDIC 217

Query: 184 TLKVG 188
            +   
Sbjct: 218 VITKD 222


>gi|308470159|ref|XP_003097314.1| CRE-PBS-2 protein [Caenorhabditis remanei]
 gi|308240286|gb|EFO84238.1| CRE-PBS-2 protein [Caenorhabditis remanei]
          Length = 290

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 10/198 (5%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M  MG K   +    TTI+     G +V+  D + + G  +   +  KV +L +     G
Sbjct: 45  MCKMGAKAPRLTSTGTTIVAAAYKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACG 104

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIA--D 114
            AG++AD   + + L   L        R +  +         +  Y   + A +LI   D
Sbjct: 105 -AGTAADLDQVTKMLSGNLRLMELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVD 163

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
            T   +     +         A GSG   A++          + EE   + ++A+     
Sbjct: 164 PTGPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKPDMTKEEAESLVQRALQAGMH 223

Query: 172 ICVYTNHNIVLETLKVGD 189
               + +++ L  ++  +
Sbjct: 224 GDNASGNSLNLVIIEPNE 241


>gi|255029340|ref|ZP_05301291.1| hypothetical protein LmonL_09813 [Listeria monocytogenes LO28]
          Length = 450

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +++HATTI  V+ DG   +AGDGQV+LG   VMK  A+KVRRL    +IAGFAGS ADAF
Sbjct: 309 MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLFHDKVIAGFAGSVADAF 368

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           TL E+ E KL +Y   L R+SVELA+ WR D  LR LEAM+++ DK   L 
Sbjct: 369 TLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLIVMDKDTLLF 419


>gi|295673398|ref|XP_002797245.1| proteasome component PUP1 [Paracoccidioides brasiliensis Pb01]
 gi|226282617|gb|EEH38183.1| proteasome component PUP1 [Paracoccidioides brasiliensis Pb01]
          Length = 276

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    D  VVIA D + + G  V   N  K+  +      AG AG++AD       
Sbjct: 29  GTTIVGCIFDAGVVIAADTRATSGPIVADKNCEKLHYITPKIWCAG-AGTAADTEFTTAL 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDVL 128
           +   LE +     RS   +     + ++L   +  I         D T   + T      
Sbjct: 88  MSSNLELHALSTGRSPRVVTCLTMLKQHLFRYQGHIGAYLVVAGVDPTGVGLYTVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA-RKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A+S    +   + + +E     + +I A I   + +  N+ +  +
Sbjct: 148 TDKLPYVTMGSGSLAAMSVFETMWKPELNKDEAVNLCSEAILAGIFNDLGSGSNVDVCII 207

Query: 186 KVG 188
              
Sbjct: 208 YKE 210


>gi|302783991|ref|XP_002973768.1| hypothetical protein SELMODRAFT_149251 [Selaginella moellendorffii]
 gi|300158806|gb|EFJ25428.1| hypothetical protein SELMODRAFT_149251 [Selaginella moellendorffii]
          Length = 269

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  L       G AG++AD   + + 
Sbjct: 37  GTTIVGLVYQDGVILGADTRATEGDIVADKNCEKIHYLAPNIYCCG-AGTAADTEAVTDM 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R S  +     +  +L N +  +  A      D +   + T      
Sbjct: 96  VRTQLELHRYATGRGSRVITALTMLKSHLFNYQGHVSAALVLGGFDVSGPHLHTVYPHGS 155

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A    + + EE   +   A  I A I   + +  N+ L 
Sbjct: 156 TDTLPFATMGSGSLAAMSVFEAGFREKMTKEEGMSLVSDA--ICAGIFNDLGSGSNVDLC 213

Query: 184 TLKV 187
            +  
Sbjct: 214 VITK 217


>gi|297802906|ref|XP_002869337.1| hypothetical protein ARALYDRAFT_328593 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315173|gb|EFH45596.1| hypothetical protein ARALYDRAFT_328593 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 234

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 12  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADSQVVSDY 70

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE----- 129
           +   L Q+  QL + +        +     N +  +L     +       G  +      
Sbjct: 71  VRYFLHQHTIQLGQPATVKVSANLIRMLAYNNKQNMLQTGLIVGGWDKYEGGKIYGIPLG 130

Query: 130 ---PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E      GSG SY             +   AE++  KA+S+A      +   +   
Sbjct: 131 GTVVEQPFAIGGSGSSYLYGFFDQAWKENMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 190

Query: 184 TLKVG 188
            +   
Sbjct: 191 IINSE 195


>gi|68075915|ref|XP_679877.1| proteasome subunit beta type 7 precursor [Plasmodium berghei strain
           ANKA]
 gi|56500717|emb|CAH98881.1| proteasome subunit beta type 7 precursor, putative [Plasmodium
           berghei]
          Length = 270

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 62/185 (33%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + + G  V   N  K+  + K    AG AG + D       
Sbjct: 41  GTTICGIVCQNAVILGADTRATEGPIVADKNCSKLHYISKNIYCAG-AGVAGDLEHTTLW 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           L+  +E +               R+ + L   +   + A      D T   +        
Sbjct: 100 LQHNVELHRLNTKTQPRVAMCVSRLTQELFKYQGYKVCAIVLGGVDVTGPQLYGIHPHGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++   A      + E   E+  +A  I A I   + +  N+ + 
Sbjct: 160 SCLLPFTALGSGSLNAMTVLEAKYRDNMTIEEGKELVCEA--ICAGIFNDLGSGGNVDIC 217

Query: 184 TLKVG 188
            +   
Sbjct: 218 VITKD 222


>gi|114610310|ref|XP_001139601.1| PREDICTED: proteasome beta 1 subunit isoform 2 [Pan troglodytes]
          Length = 240

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 20/201 (9%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITL 119
           D  TL + +E +L+ Y +   ++    A    +   L +               D+    
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGGA 147

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAMS 167
           V +         +   A GS  +         +  +N             A  + +    
Sbjct: 148 VYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFI 207

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  VYT   + +  +   
Sbjct: 208 SAAERDVYTGDALRICIVTKE 228


>gi|269126673|ref|YP_003300043.1| 20S proteasome subunits A and B [Thermomonospora curvata DSM 43183]
 gi|302595729|sp|D1A3V2|PSB2_THECD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PrcB 2; Flags: Precursor
 gi|268311631|gb|ACY98005.1| 20S proteasome A and B subunits [Thermomonospora curvata DSM 43183]
          Length = 280

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 65/174 (37%), Gaps = 22/174 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ VR    V++AGD + + G  + + +  KV R  + + +A  AG+   A  ++ 
Sbjct: 51  HGTTIVAVRYPEGVMLAGDRRATSGNLIAQKDLEKVHRADEHSAVA-MAGTVGLALEMIR 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
            L+ +LE Y            K  R+   +R   A  +     + +      D       
Sbjct: 110 LLQVELEHYEKLQSAKLSLPGKARRLGAVIRANLAHAMQGLAVVPVFAGYDLDAGVGRIY 169

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
                   +      A GSG  +A  A + L     +  E        AA +CV
Sbjct: 170 NYDITGMPQESRDFHAEGSGSPFARGALKKLYRPDLTEAE--------AAAVCV 215


>gi|225193058|dbj|BAH29668.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           L   L  +     R+   +         + +Y   + A +++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDVLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TKQ 213


>gi|71033575|ref|XP_766429.1| proteasome subunit beta type 7 precursor [Theileria parva strain
           Muguga]
 gi|68353386|gb|EAN34146.1| proteasome subunit beta type 7 precursor, putative [Theileria
           parva]
          Length = 262

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+A D + + G  V   N  K+ ++      AG AG +AD       
Sbjct: 31  GTTICGVMGKDSVVLAADTRATQGIIVADKNCSKLHKISDNIYCAG-AGVAADLEHTTLW 89

Query: 75  LEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           L   +E +     +          L  +    +  +    ++   D T   + +      
Sbjct: 90  LANNIELHRLNTKKQPRAQMCISMLVHELFKYQGYKQCALILGGFDYTGPHLFSVSPHGS 149

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS-IAADI--CVYTNHNIVLETL 185
                   +GSG   A++          S EE    A+  I+A I   + +  N+ +  L
Sbjct: 150 SDSLPFCTMGSGSLNAMTVLEQNYFDGMSVEEAVELAVKAISAGITNDLGSGGNVDVVVL 209

Query: 186 KVG 188
              
Sbjct: 210 DKN 212


>gi|68473123|ref|XP_719367.1| potential proteasome subunit [Candida albicans SC5314]
 gi|46441180|gb|EAL00479.1| potential proteasome subunit [Candida albicans SC5314]
 gi|238880392|gb|EEQ44030.1| proteasome component PUP1 precursor [Candida albicans WO-1]
          Length = 272

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  +    VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGCKFKDGVVIAADTRATSGPIVADKNCEKLHRLAPKIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    +A        + KY  +L A +++A  D T   +++      
Sbjct: 88  IASNLELHALSQNRQPRVIAALTMLKQHLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
                  ++GSG   A++          +   A ++   A+       + +  N+ +  +
Sbjct: 148 TDIGKYQSLGSGSLNAMAVLETNFKEDMTRDEAIKLCSDAILAGVWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           +VG +
Sbjct: 208 EVGKD 212


>gi|146305014|ref|YP_001192330.1| proteasome endopeptidase complex [Metallosphaera sedula DSM 5348]
 gi|302595851|sp|A4YJ04|PSB2_METS5 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|145703264|gb|ABP96406.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Metallosphaera sedula DSM
           5348]
          Length = 196

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 12/182 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +R    V++    ++S G  V+  +A+KV  + +  I  G AG   D   L   + 
Sbjct: 7   TAVGIRLQDGVILGAVRRLSYGGYVLSKSAKKVFPISRFGI--GGAGLFGDLQALTRIMN 64

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLE 129
             ++ Y     R     A    +   L   + M  I        D     +         
Sbjct: 65  ANIKYYELYNNRPISTRAAAKLLSIILYQYKYMPFISEVLFGGVDNGEPQLYVLDPLGSL 124

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETLK 186
            ++   A+GSG   A+    A  S + +     E+  K++  +A+  V +   I + T+ 
Sbjct: 125 LDDIYAAVGSGARVAIGVLEAEYSEKLTLTQGRELTIKSLRASAERDVTSGDGIDILTIS 184

Query: 187 VG 188
             
Sbjct: 185 KD 186


>gi|224118628|ref|XP_002331409.1| predicted protein [Populus trichocarpa]
 gi|118484942|gb|ABK94336.1| unknown [Populus trichocarpa]
 gi|222873623|gb|EEF10754.1| predicted protein [Populus trichocarpa]
          Length = 237

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 13/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+ T+ + 
Sbjct: 16  GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLC-RSGSAADSQTVSDY 74

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE----- 129
           +   L Q+  QL + +        + + L       L     +       G  +      
Sbjct: 75  VRYFLHQHTIQLGQPATVKVAANLV-RMLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 133

Query: 130 ---PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E      GSG SY             +   AE++  KA+S+A      +   +   
Sbjct: 134 GTLLELPFTIGGSGSSYLYGFFDQAWKDGMTQEEAEQLVVKAVSLAIARDGASGGVVRTV 193

Query: 184 TLKVG 188
           T+   
Sbjct: 194 TINSE 198


>gi|18312192|ref|NP_558859.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
 gi|74565305|sp|Q8ZYF2|PSB1_PYRAE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|18159629|gb|AAL63041.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
          Length = 202

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 12/185 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D +V+ G  +      K+ ++    + A  +G  AD  ++L  L
Sbjct: 2   TTTVGIAVKDGVVLATDKRVTAGYYIAHKRGEKIWKIDDH-VAATMSGGVADLQSVLSFL 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGMGDV 127
             +  +Y  +  R     A    M   L      I I    I          +       
Sbjct: 61  TLRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLG 120

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +   +A GSG  YA  A             A ++A KA+  A      +   I +  
Sbjct: 121 TVTKEKYIATGSGSPYAKGALEVGYREDMTLEDAVDLAIKAVKAAIRNDPGSGEGIDVVV 180

Query: 185 LKVGD 189
           +   +
Sbjct: 181 ITRKE 185


>gi|255627685|gb|ACU14187.1| unknown [Glycine max]
          Length = 223

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 25/211 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  + + +      VIA D ++S G  ++  +  K+ RL +  ++A 
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISRLAEKCVMA- 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +G  AD   L + L  +   Y +Q  +     A    +   L         A       
Sbjct: 60  SSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGL 119

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
            ++    V T          G  + GSG +  +      +                 ++ 
Sbjct: 120 DNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 179

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            A ++ +   + A +  +YT   + +  L  
Sbjct: 180 EAVDLVKTVFASATERDIYTGDKVEIVVLNA 210


>gi|302788093|ref|XP_002975816.1| hypothetical protein SELMODRAFT_150796 [Selaginella moellendorffii]
 gi|300156817|gb|EFJ23445.1| hypothetical protein SELMODRAFT_150796 [Selaginella moellendorffii]
          Length = 270

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  L       G AG++AD   + + 
Sbjct: 38  GTTIVGLVYQDGVILGADTRATEGDIVADKNCEKIHYLAPNIYCCG-AGTAADTEAVTDM 96

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  +LE +     R S  +     +  +L N +  +  A      D +   + T      
Sbjct: 97  VRTQLELHRYATGRGSRVITALTMLKSHLFNYQGHVSAALVLGGFDVSGPHLHTVYPHGS 156

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A    + + EE   +   A  I A I   + +  N+ L 
Sbjct: 157 TDTLPFATMGSGSLAAMSVFEAGFREKMTKEEGMSLVSDA--ICAGIFNDLGSGSNVDLC 214

Query: 184 TLKV 187
            +  
Sbjct: 215 VITK 218


>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
           11548]
 gi|302595828|sp|A3MXQ6|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
           11548]
          Length = 203

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + ++    VV+A + +VS G   +    +KV  +     IA  AG  AD  TL + 
Sbjct: 8   GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIA-SAGIIADMQTLAKI 66

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           L+   + Y  ++ R     A    +   + +   M   A       D     +I      
Sbjct: 67  LKLNAKAYELEMKRKPSVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEGPHLIVMDPLG 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E+   A+G+G   A++   A      S   A+++A +A+  A +    +   I L  
Sbjct: 127 SLIEDNYAALGTGAKLAIAIIDASYKPDMSLQDAKKLAVQALKAALERDPVSGGGIDLVV 186

Query: 185 LKVG 188
           +   
Sbjct: 187 IDKN 190


>gi|50540152|ref|NP_001002543.1| proteasome subunit beta type-10 [Danio rerio]
 gi|49903016|gb|AAH76265.1| Zgc:92791 [Danio rerio]
          Length = 276

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 10/181 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 42  GTTIAGLVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCG-AGVAADAEVTTQM 100

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +   +E +     R  +      ++ + L   +  I         D     + +      
Sbjct: 101 MSSSVELHSLSTGRPPLVAMVTRQLKQMLFRYQGHIGSSLIVGGVDVNGAQLYSVYPHGS 160

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
             +   + +GSG + A+S              A+++ R A++      + +  N+ L  +
Sbjct: 161 YDKLPFLTMGSGAASAISVFEDRYKPNMELEEAKQLVRDAITAGIFCDLGSGSNVDLCVI 220

Query: 186 K 186
            
Sbjct: 221 T 221


>gi|299115128|emb|CBN75495.1| 20S proteasome beta 5 subunit [Ectocarpus siliculosus]
          Length = 264

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 27/200 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT + +  DG V+ A D + S+G  V     +KV  + +  I+   AG +AD    L 
Sbjct: 34  HGTTTVALVCDGGVIAAVDSRASMGSFVGSRTTQKVIPVSQH-ILGTMAGGAADCTFWLR 92

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------------- 119
            L  + + + ++             +   L       L     I                
Sbjct: 93  YLGMQAKVFEDRNGFQMPVATAARVLADALLGQRGKGLSVGTMIMGHDRGNRDSSGRGSV 152

Query: 120 ---------VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                    +     D    +    ++GSG +YA S          S EE   +A++A+ 
Sbjct: 153 SGGNQGGGQLFYVDSDGARVKGRYFSVGSGSTYAYSVLDEGYRDGMSLEEAADLAKRAVR 212

Query: 168 IAADICVYTNHNIVLETLKV 187
            A     ++   I +  +  
Sbjct: 213 HATYRDAFSGGFINVFVVDA 232


>gi|322489333|emb|CBZ24592.1| putative proteasome beta-1 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 283

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 60/185 (32%), Gaps = 11/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTIL V   G VV+A D + S G  V+   + K+ +L K  I    +GS+AD   L ER
Sbjct: 54  GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTK-KIYCCRSGSAADTQALAER 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y   +              K        I                V +     
Sbjct: 113 VSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWNISAGIIVAGYDLINGGSVYSIPSGG 172

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
              +      GSG  +  S   A      S  E     ++A++ A      +   I   T
Sbjct: 173 SCVKLDYALGGSGSIFLYSFFDANYKPDMSKSECVAFCQRAVAHAYSRDGSSGGLIRTIT 232

Query: 185 LKVGD 189
           L   +
Sbjct: 233 LDADE 237


>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
          Length = 239

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 61/204 (29%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T++ V  D   V+A   ++S G +++  N  K+ +L    +IA  AG  AD 
Sbjct: 25  SPYDDNGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILQLNPKCVIA-SAGMQADQ 83

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
            TL + L  +   Y     +     A    +   L                  D+    V
Sbjct: 84  ETLHKVLHSRHVTYQFNHRKPMACPAMAQLLSNTLYYKRFFPYYTFNLCAGLDDEGRGAV 143

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARK 164
            T          G    G+G           +                     A ++ + 
Sbjct: 144 YTYDAIGSYERVGYGCQGNGKELVQPVLDNQLKAASPLALPPQQWLSSLPLEQAVDLVKG 203

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
           A   A +  +YT  ++ +  +   
Sbjct: 204 AFVSAGERDIYTGDDVEILIITKD 227


>gi|195055624|ref|XP_001994713.1| GH14538 [Drosophila grimshawi]
 gi|193892476|gb|EDV91342.1| GH14538 [Drosophila grimshawi]
          Length = 275

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 12/183 (6%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++ H TT L  +  G ++++ + +V+  +++   +  K+  + K  I+  FAG + D   
Sbjct: 52  IRNHGTTTLGFKYQGGIILSAESRVTNEESISSTSMEKIIVVHKN-ILGTFAGCAGDCAF 110

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VIT 122
               L ++   +          +     M   +     + L     +          +I 
Sbjct: 111 WCRALTRECRLFELNYGHCMPVIIASKMMSNMMYRFRDLELYMGMMLAGYDPVDGAKLIY 170

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
              +    E     +GSG  YA    +           A  +A   +  A+ +  +T   
Sbjct: 171 VDSEGSHEEVNCHVVGSGEVYASGLIKRFYKWDLGNDEAYNLALNVIHNASQMDWHTGGP 230

Query: 180 IVL 182
           I L
Sbjct: 231 ISL 233


>gi|229366584|gb|ACQ58272.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
          Length = 237

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 24  HRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   ++    A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRGFFPYYVYNIIGGLDEHGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIARKA 165
               +         +   A GS  +         +             TQ+ A ++ +  
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAVLQPLLDNQIGFKNMEGVQHVPLTQDKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VY    + +  +   
Sbjct: 203 FISAAERDVYIGDALRVCIITKE 225


>gi|15609247|ref|NP_216626.1| proteasome (beta subunit) PrcB [Mycobacterium tuberculosis H37Rv]
 gi|15841602|ref|NP_336639.1| proteasome, beta subunit [Mycobacterium tuberculosis CDC1551]
 gi|31793290|ref|NP_855783.1| proteasome (beta subunit) PrcB [Mycobacterium bovis AF2122/97]
 gi|121637992|ref|YP_978216.1| proteasome subunit beta PrcB [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661925|ref|YP_001283448.1| proteasome subunit beta [Mycobacterium tuberculosis H37Ra]
 gi|148823321|ref|YP_001288075.1| proteasome beta subunit prcB [Mycobacterium tuberculosis F11]
 gi|167967479|ref|ZP_02549756.1| proteasome beta subunit prcB [Mycobacterium tuberculosis H37Ra]
 gi|215403493|ref|ZP_03415674.1| proteasome beta subunit prcB [Mycobacterium tuberculosis 02_1987]
 gi|215411813|ref|ZP_03420605.1| proteasome beta subunit prcB [Mycobacterium tuberculosis 94_M4241A]
 gi|215427486|ref|ZP_03425405.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T92]
 gi|215431034|ref|ZP_03428953.1| proteasome beta subunit prcB [Mycobacterium tuberculosis EAS054]
 gi|215446334|ref|ZP_03433086.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T85]
 gi|218753831|ref|ZP_03532627.1| proteasome beta subunit prcB [Mycobacterium tuberculosis GM 1503]
 gi|219558083|ref|ZP_03537159.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T17]
 gi|224990486|ref|YP_002645173.1| proteasome subunit beta [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798828|ref|YP_003031829.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 1435]
 gi|254232270|ref|ZP_04925597.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis C]
 gi|254364917|ref|ZP_04980963.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551142|ref|ZP_05141589.1| proteasome beta subunit prcB [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187098|ref|ZP_05764572.1| proteasome beta subunit prcB [Mycobacterium tuberculosis CPHL_A]
 gi|260201219|ref|ZP_05768710.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T46]
 gi|260205398|ref|ZP_05772889.1| proteasome beta subunit prcB [Mycobacterium tuberculosis K85]
 gi|289443613|ref|ZP_06433357.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T46]
 gi|289447730|ref|ZP_06437474.1| proteasome beta subunit prcB [Mycobacterium tuberculosis CPHL_A]
 gi|289554104|ref|ZP_06443314.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 605]
 gi|289570223|ref|ZP_06450450.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T17]
 gi|289574789|ref|ZP_06455016.1| proteasome beta subunit prcB [Mycobacterium tuberculosis K85]
 gi|289745383|ref|ZP_06504761.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis 02_1987]
 gi|289750704|ref|ZP_06510082.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T92]
 gi|289754218|ref|ZP_06513596.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis EAS054]
 gi|289758228|ref|ZP_06517606.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis T85]
 gi|289762272|ref|ZP_06521650.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis GM 1503]
 gi|294993518|ref|ZP_06799209.1| proteasome subunit beta [Mycobacterium tuberculosis 210]
 gi|297634694|ref|ZP_06952474.1| proteasome subunit beta [Mycobacterium tuberculosis KZN 4207]
 gi|297731682|ref|ZP_06960800.1| proteasome subunit beta [Mycobacterium tuberculosis KZN R506]
 gi|298525606|ref|ZP_07013015.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776357|ref|ZP_07414694.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu001]
 gi|306784880|ref|ZP_07423202.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu003]
 gi|306789247|ref|ZP_07427569.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu004]
 gi|306793576|ref|ZP_07431878.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu005]
 gi|306797965|ref|ZP_07436267.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu006]
 gi|306803844|ref|ZP_07440512.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu008]
 gi|306808417|ref|ZP_07445085.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu007]
 gi|306968240|ref|ZP_07480901.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu009]
 gi|306972467|ref|ZP_07485128.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu010]
 gi|307080178|ref|ZP_07489348.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu011]
 gi|307084758|ref|ZP_07493871.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu012]
 gi|313659017|ref|ZP_07815897.1| proteasome subunit beta [Mycobacterium tuberculosis KZN V2475]
 gi|81422055|sp|Q7TZ13|PSB_MYCBO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|81669082|sp|O33245|PSB_MYCTU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|302595763|sp|A1KKF3|PSB_MYCBP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|302595764|sp|C1AQ26|PSB_MYCBT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|302595771|sp|A5U4D6|PSB_MYCTA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|302595772|sp|A5WP84|PSB_MYCTF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|302595773|sp|C6DPV1|PSB_MYCTK RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|167013196|pdb|2JAY|A Chain A, Proteasome Beta Subunit Prcb From Mycobacterium
           Tuberculosis
 gi|2253050|emb|CAB10714.1| proteasome (beta subunit) PrcB [Mycobacterium tuberculosis H37Rv]
 gi|13881852|gb|AAK46453.1| proteasome, beta subunit [Mycobacterium tuberculosis CDC1551]
 gi|31618882|emb|CAD96987.1| proteasome (beta subunit) PrcB [Mycobacterium bovis AF2122/97]
 gi|121493640|emb|CAL72115.1| proteasome (beta subunit) PrcB [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601329|gb|EAY60339.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis C]
 gi|134150431|gb|EBA42476.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506077|gb|ABQ73886.1| proteasome subunit beta [Mycobacterium tuberculosis H37Ra]
 gi|148721848|gb|ABR06473.1| proteasome beta subunit prcB [Mycobacterium tuberculosis F11]
 gi|148832234|gb|ABR14062.1| PrcB [Mycobacterium tuberculosis H37Ra]
 gi|224773599|dbj|BAH26405.1| proteasome subunit beta [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253320331|gb|ACT24934.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 1435]
 gi|289416532|gb|EFD13772.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T46]
 gi|289420688|gb|EFD17889.1| proteasome beta subunit prcB [Mycobacterium tuberculosis CPHL_A]
 gi|289438736|gb|EFD21229.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 605]
 gi|289539220|gb|EFD43798.1| proteasome beta subunit prcB [Mycobacterium tuberculosis K85]
 gi|289543977|gb|EFD47625.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T17]
 gi|289685911|gb|EFD53399.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis 02_1987]
 gi|289691291|gb|EFD58720.1| proteasome beta subunit prcB [Mycobacterium tuberculosis T92]
 gi|289694805|gb|EFD62234.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis EAS054]
 gi|289709778|gb|EFD73794.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis GM 1503]
 gi|289713792|gb|EFD77804.1| proteasome subunit beta PrcB [Mycobacterium tuberculosis T85]
 gi|298495400|gb|EFI30694.1| proteasome (beta subunit) prcB [Mycobacterium tuberculosis
           94_M4241A]
 gi|308215203|gb|EFO74602.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu001]
 gi|308330397|gb|EFP19248.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu003]
 gi|308334232|gb|EFP23083.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu004]
 gi|308338032|gb|EFP26883.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu005]
 gi|308341718|gb|EFP30569.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu006]
 gi|308345208|gb|EFP34059.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu007]
 gi|308349511|gb|EFP38362.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu008]
 gi|308354141|gb|EFP42992.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu009]
 gi|308358079|gb|EFP46930.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu010]
 gi|308362013|gb|EFP50864.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu011]
 gi|308365661|gb|EFP54512.1| proteasome beta subunit prcB [Mycobacterium tuberculosis SUMu012]
 gi|323719323|gb|EGB28464.1| proteasome beta subunit prcB [Mycobacterium tuberculosis CDC1551A]
 gi|326903725|gb|EGE50658.1| proteasome beta subunit prcB [Mycobacterium tuberculosis W-148]
 gi|328458589|gb|AEB04012.1| proteasome beta subunit prcB [Mycobacterium tuberculosis KZN 4207]
          Length = 291

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VV+AGD + + G  +   + RKV          G AG++A A     
Sbjct: 56  HGTTIVALKYPGGVVMAGDRRSTQGNMISGRDVRKVYITDDYTA-TGIAGTAAVAVEFAR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R   A  +     + L+             
Sbjct: 115 LYAVELEHYEKLEGVPLTFAGKINRLAIMVRGNLAAAMQGLLALPLLAGYDIHASDPQSA 174

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    G     E G  A+GSG  +A S+ + L S     +S   +A +A+  AAD 
Sbjct: 175 GRIVSFDAAGGWNIEEEGYQAVGSGSLFAKSSMKKLYSQVTDGDSGLRVAVEALYDAADD 234

Query: 173 CVYTNH 178
              T  
Sbjct: 235 DSATGG 240


>gi|3024440|sp|P93395|PSB6_TOBAC RecName: Full=Proteasome subunit beta type-6; AltName:
           Full=Proteasome delta chain; AltName: Full=Tobacco
           cryptogein-induced protein 7; Short=tcI 7; Flags:
           Precursor
 gi|1743356|emb|CAA70699.1| proteasome delta subunit [Nicotiana tabacum]
          Length = 234

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 13  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADSQIVSDY 71

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L Q+  QL + +                   L+  ++I          +       
Sbjct: 72  VRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGGKIYGIPPGG 131

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E      GSG SY             +   AE++   A+S+A      +   +   T
Sbjct: 132 TVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASGGVVRTVT 191

Query: 185 LKVG 188
           +   
Sbjct: 192 INKD 195


>gi|296081796|emb|CBI20801.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     I   +GS+AD+  + + 
Sbjct: 2   GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYIC-RSGSAADSQIVSDY 60

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L     +          +       
Sbjct: 61  VRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEGGKIYAIPLGG 120

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E      GSG +Y             +   AE++  KA+S+A      +   I    
Sbjct: 121 TIIEQPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGASGGVIRTVI 180

Query: 185 LKVG 188
           +   
Sbjct: 181 INSE 184


>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
          Length = 202

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 12/185 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A + + ++G  +    A+K+ ++     +   AGS  DA  L   +
Sbjct: 1   TTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTT-AGSVGDAQFLARII 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG-DV 127
           + +   Y  +  R     A        L +      +        D     + +      
Sbjct: 60  KIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIGG 119

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLET 184
              E  ++A GSG   A        + +   + A E+A +A+  A      +   I +  
Sbjct: 120 AIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVK 179

Query: 185 LKVGD 189
           +   +
Sbjct: 180 ITEDE 184


>gi|308800528|ref|XP_003075045.1| Pbb 20S proteasome beta subunit, probable (IC) [Ostreococcus tauri]
 gi|116061599|emb|CAL52317.1| Pbb 20S proteasome beta subunit, probable (IC) [Ostreococcus tauri]
          Length = 251

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V  +  V++  D + + G+TV   +  K+  +       G AG++AD  ++   
Sbjct: 25  GTTICGVVFEAGVILGADTRSTNGETVADKDCEKIHYIAPNIYCCG-AGTAADTESVTGL 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   L  +  Q  R S   +    +   L   +  I  A      D   + + T      
Sbjct: 84  ISSNLLLHRKQTDRPSAVKSALTLLKTTLFRHQGHIGAALVLGGVDSDGSHLFTVYPHGS 143

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
                  A+GSG   A++        + S   A+ +  +A+       + +  N+ L  +
Sbjct: 144 SDALPYAAMGSGSLAAMATLETGYHEEMSLDAAKNLVTRAILSGVMNDLGSGSNVDLCVI 203

Query: 186 KVG 188
              
Sbjct: 204 TRD 206


>gi|225703584|gb|ACO07638.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
          Length = 277

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 11/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  V     VV+  D + + G+ V      K+  +       G AG++AD 
Sbjct: 38  KPMKT-GTTIAGVLCKNGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCG-AGTAADT 95

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
               + L   L  +     R+   +     +   L           ++   D T   +  
Sbjct: 96  EKTTDLLSSNLTIFSMNSGRNPRVVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYK 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +A+GSG   AL               A+E+ R A+       + + +N
Sbjct: 156 VGPYGSIDNVPYLAMGSGDLAALGILEDRFKADMEMEEAKELVRDAIHSGIMSDLGSGNN 215

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 216 IDICVITKQ 224


>gi|224090541|ref|XP_002309021.1| predicted protein [Populus trichocarpa]
 gi|222854997|gb|EEE92544.1| predicted protein [Populus trichocarpa]
          Length = 237

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+ T+ + 
Sbjct: 16  GTTIIGVTYNGGVVLGADSRTSTGIYVANRASDKITQLTDNVYLC-RSGSAADSQTVSDY 74

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L+    +          +       
Sbjct: 75  VRYFLHQHTIQLGQPATVKVAANLVRLLSYSNKNMLQTGMIIGGWDKYEGGKIYGVPLGG 134

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E      GSG +Y             +   AE++  KA+S+A      +   +   T
Sbjct: 135 TLLELPFTIGGSGSTYLYGFFDQAWKEGMTQEEAEQLVVKAVSLAIARDGASGGVVRTVT 194

Query: 185 LKVG 188
           +   
Sbjct: 195 INSE 198


>gi|315518862|dbj|BAJ51760.1| proteasome subunit, beta type 10 [Oryzias celebensis]
          Length = 261

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 27  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 85

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 86  LSSNLTVFSLNSGRNPRIVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 145

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+E+ R A+       + + +NI +  +
Sbjct: 146 VNKVPYLAMGSGDLAALGILEDGFKHGLELEKAKELVRDAIHAGIMSDLGSGNNIDICVI 205

Query: 186 KVG 188
              
Sbjct: 206 TKK 208


>gi|225429850|ref|XP_002283195.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 231

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     I   +GS+AD+  + + 
Sbjct: 10  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYIC-RSGSAADSQIVSDY 68

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L     +          +       
Sbjct: 69  VRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEGGKIYAIPLGG 128

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E      GSG +Y             +   AE++  KA+S+A      +   I    
Sbjct: 129 TIIEQPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGASGGVIRTVI 188

Query: 185 LKVG 188
           +   
Sbjct: 189 INSE 192


>gi|17380185|sp|O82531|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
           proteasome alpha subunit F; AltName: Full=20S proteasome
           subunit beta-6
 gi|3608485|gb|AAC35983.1| proteasome beta subunit [Petunia x hybrida]
          Length = 223

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 25/211 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  T + V      VIA D ++S G  ++  +  K+ +L    ++A 
Sbjct: 1   MTKQQANWSPYDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMA- 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   L + L  +   Y +Q  +     A    +   L         +   +  +
Sbjct: 60  SSGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGL 119

Query: 121 --------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
                    T          G  + GSG +  +      +                 ++ 
Sbjct: 120 DSEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 179

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            A ++ +   + A +  +YT   + +  L  
Sbjct: 180 EAIDLVKTCFASATERDIYTGDRLEIVILNA 210


>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
 gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
 gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
          Length = 239

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L +  D   ++A D ++S G ++   N  K  +L    +I G  G  
Sbjct: 26  QRFNPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDKTVI-GCTGFH 84

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
           AD  TL + +E +L+ Y +   ++    A    +   L +           I  +     
Sbjct: 85  ADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGK 144

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARA--LMSTQNS----------AEEIARKA 165
               +         +   A GS  +                +          A ++ +  
Sbjct: 145 GAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEQLPLTLEKALKLIKDV 204

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 205 FISAAERDVYTGDALHISIVTKD 227


>gi|255574159|ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
 gi|223532621|gb|EEF34407.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
          Length = 231

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 10  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADSQIVSDY 68

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L     +          +       
Sbjct: 69  VRYFLHQHTIQLGQPATVKVAANLVRLISYNNKNMLETGLIVGGWDKYDGGKIYGIPLGG 128

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E      GSG SY             +   AE++  KA+S+A      +   +    
Sbjct: 129 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAMARDGASGGVVRTVI 188

Query: 185 LKVG 188
           +   
Sbjct: 189 INSE 192


>gi|116780814|gb|ABK21828.1| unknown [Picea sitchensis]
 gi|116783100|gb|ABK22793.1| unknown [Picea sitchensis]
 gi|224284319|gb|ACN39895.1| unknown [Picea sitchensis]
 gi|224285431|gb|ACN40438.1| unknown [Picea sitchensis]
          Length = 229

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 68/204 (33%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T + +      VIA D ++S G +++  +  K+  L    ++A  +G  AD 
Sbjct: 15  SPYDNNGGTCIAIAGSNYCVIAADTRMSTGYSILTRDYSKICNLADKCVMA-SSGFQADV 73

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
             L + L  +   Y +Q  +     A    +   L         +        ++    V
Sbjct: 74  KALQKNLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 133

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARK 164
            T          G  A G+GG+  +      +                 +++ A ++ + 
Sbjct: 134 FTYDAVGSYERVGYGAQGTGGTLMMPVLDNQLKSPSPLLLPAQDATTPLSESEAVDLVKD 193

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
             + AA+  +YT   + +  +   
Sbjct: 194 VFASAAERDIYTGDGLEIVVVNAE 217


>gi|242049776|ref|XP_002462632.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
 gi|241926009|gb|EER99153.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
          Length = 221

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 66/201 (32%), Gaps = 25/201 (12%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            + +  T + +      V+A D ++S+G +++  +  K+  L    ++A  +G   D   
Sbjct: 9   YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLA-SSGFQGDIKA 67

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------IT 122
           L + L  +   Y +Q  +     A    +   L         A   +  +         T
Sbjct: 68  LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARKAM 166
                     G  A G+G +  +      +                 +++ A ++ +   
Sbjct: 128 YDAVGSYERTGYSAQGTGSTLMMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVF 187

Query: 167 SIAADICVYTNHNIVLETLKV 187
           + A +  +YT   + +  +  
Sbjct: 188 ASATERDIYTGDKLEIVVINK 208


>gi|225453909|ref|XP_002279266.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296089152|emb|CBI38855.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 67/211 (31%), Gaps = 25/211 (11%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  + + +      VIA D ++S G  ++  +  K+ +L    ++A 
Sbjct: 1   MTKQQANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICKLADKCVMA- 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +G  AD   L + L  +   Y +Q  +     A    +   L         +       
Sbjct: 60  SSGFQADVRALQKHLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGL 119

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
            ++    V T        + G  + GSG +  +      +                 ++ 
Sbjct: 120 DNEGKGCVFTYDAVGSYEKVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPALDAVTPLSEP 179

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKV 187
            A ++ +   + A +  +YT   + +  L  
Sbjct: 180 EAVDLVKTVFASATERDIYTGDKLEIVILNA 210


>gi|79325892|ref|NP_001031759.1| PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|332660488|gb|AEE85888.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
          Length = 234

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 12  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADSQVVSDY 70

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE----- 129
           +   L Q+  Q  + +        +     N +  +L     +       G  +      
Sbjct: 71  VRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKQNMLQTGLIVGGWDKYEGGKIYGIPLG 130

Query: 130 ---PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E      GSG SY             +   AE++  KA+S+A      +   +   
Sbjct: 131 GTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 190

Query: 184 TLKVG 188
            +   
Sbjct: 191 IINSE 195


>gi|209738272|gb|ACI70005.1| Proteasome subunit beta type-7 precursor [Salmo salar]
          Length = 254

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  V     VV+  D + + G+ V      K+  +       G AG++AD 
Sbjct: 38  KPMKT-GTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADT 95

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
               + L   L  +     R+   +     +   L           ++   D T   + T
Sbjct: 96  EKTTDMLSSNLTIFSMTSGRNPRVVMAVNILQDVLFRYRGQIGASLILGGVDCTGNHLYT 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +A+GSG   AL               A+E+ R A+       + + +N
Sbjct: 156 VGPYGSIDNVPYLAMGSGDLAALGILEDRFKPNMELEEAKELVRDAIHSGIMSDLGSGNN 215

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 216 IDICVITKQ 224


>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
 gi|302595704|sp|B8D673|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
          Length = 202

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T + ++    VV+A + +++    V+  NARK+  +     + GFAG   D   L++ L
Sbjct: 8   GTAIGLKTSEGVVLASEKRLTYDGFVLSRNARKIHMITNHIGV-GFAGLMGDVNFLVKVL 66

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL-------IADKTITLVITGMGDVL 128
             + + Y  Q  R     +    +   L + +   +         D+    +        
Sbjct: 67  RLEAKNYELQHGREIKTRSLAKLLSVILYSYKLAPMLTEVVVGGYDEEGPSLYILDPVGS 126

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
             E   +A+GSG   AL       +       AEE+A  A+    +  V +   I L  +
Sbjct: 127 VIEEKYVAVGSGAQLALGYIEPRYNPGLGLKEAEELAVNAVKTVIERDVLSGDGIDLVVI 186

Query: 186 KVG 188
              
Sbjct: 187 DKN 189


>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
           aggregans DSM 11486]
 gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
           aggregans DSM 11486]
          Length = 202

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T + V+    VV+A + +++    V+ ++ +KV  +    +  GFAG   D   L   L
Sbjct: 6   GTAIGVKTREGVVLASEKRLTYDGFVLSSSVKKVYAITPH-VGVGFAGLMGDVNILKRML 64

Query: 76  EKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITGMGDVL 128
           E + + Y  Q  R      LAK   +  Y   L  M+        D     +        
Sbjct: 65  EMEAKYYELQHGREIRVRGLAKMLSVILYSYKLAPMLTEIVVGGYDDNGPQLYILDPVGS 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E    A+GSG   AL       +   S   AE++  +A+    +  V +   + +  +
Sbjct: 125 LIEEKYAALGSGAQLALGYIEPRYNPDISLEEAEKLVVEAVKTVIERDVLSGDGVDILKI 184

Query: 186 KVG 188
              
Sbjct: 185 TAK 187


>gi|281201254|gb|EFA75466.1| hypothetical protein PPL_10970 [Polysphondylium pallidum PN500]
          Length = 848

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  +G VV+  D + + G  V      K+  + +  I    +GS+AD   + + 
Sbjct: 14  GTSIMAVAYNGGVVMGADSRTTTGSYVANRVTNKITPIHE-KIYCCRSGSAADTQAISDY 72

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           +   LE + ++L                      NL A I++A         V       
Sbjct: 73  VRYYLEMHNSELGDDPDVKTAASLFQLLCYNNKNNLLAGIIVAGWDKHNGGSVYNISLGG 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      +      + +E     + ++++A      +   I L  
Sbjct: 133 SMVQQPFAIGGSGSTYIYGYCDSKFKPDMTKDECVEFVKNSLALAMFRDGSSGGVIRLCV 192

Query: 185 LKVG 188
           +   
Sbjct: 193 IDSN 196


>gi|224033845|gb|ACN35998.1| unknown [Zea mays]
          Length = 221

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 66/201 (32%), Gaps = 25/201 (12%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            + +  T + +      V+A D ++S+G +++  +  K+  L    ++A  +G   D   
Sbjct: 9   YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLA-SSGFQGDIKA 67

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------IT 122
           L + L  +   Y +Q  +     A    +   L         A   +  +         T
Sbjct: 68  LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKECVFT 127

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARKAM 166
                     G  A G+G +  +      +                 +++ A ++ +   
Sbjct: 128 YDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPARDAVTPLSESEAIDLVKDVF 187

Query: 167 SIAADICVYTNHNIVLETLKV 187
           + A +  +YT   + +  +  
Sbjct: 188 ASATERDIYTGDKLEIVVINK 208


>gi|15827687|ref|NP_301950.1| proteasome [beta]-type subunit 2 [Mycobacterium leprae TN]
 gi|221230164|ref|YP_002503580.1| proteasome beta-type subunit 2 [Mycobacterium leprae Br4923]
 gi|81346071|sp|Q49780|PSB_MYCLE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|302595766|sp|B8ZRF3|PSB_MYCLB RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|467003|gb|AAA17188.1| prcB [Mycobacterium leprae]
 gi|4200274|emb|CAA22933.1| putative proteasome beta-type subunit 2 [Mycobacterium leprae]
 gi|13093238|emb|CAC31703.1| proteasome [beta]-type subunit 2 [Mycobacterium leprae]
 gi|219933271|emb|CAR71417.1| proteasome [beta]-type subunit 2 [Mycobacterium leprae Br4923]
          Length = 291

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ ++  G VVIAGD + + G  +   + RKV          G AG +A A     
Sbjct: 55  HGTTIVVLKYPGGVVIAGDRRSTQGNMIAGRDVRKVYITDDYTA-TGIAGIAAVAVEFAR 113

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R+     +     + L+             
Sbjct: 114 LYAVELEHYEKLEGVPLTFAGKVNRLAIMVRSNLTAAMQGLLALPLLAGYDIHAPDPQSA 173

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSIAADI 172
                    G     E G  ++GSG  +A S+ + L    S  +SA  +A +A+  AAD 
Sbjct: 174 GRIVSFDAAGGWNIEEEGYQSVGSGSIFAKSSIKKLYSQVSDADSALRVAIEALYDAADD 233

Query: 173 CVYTNH 178
              T  
Sbjct: 234 DSATGG 239


>gi|328861019|gb|EGG10123.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
          Length = 280

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG V +  D + + G  V   N  K+  +       G AG++AD   +   
Sbjct: 36  GTTIVGLIYDGGVCLGADTRATEGPIVADKNCEKIHFISDNIRCCG-AGTAADTEFVTAM 94

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   +E +     R    +     + ++L   +  +  A      D T   + T      
Sbjct: 95  ISSNIELHALSTGRQPRVVTAMTMLKQHLYKFQGHVGAALVIGGVDPTGAHLFTVAPHGS 154

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A+S   +    + S   A E+   A+   A I   + +  N  + 
Sbjct: 155 TDKLPYVTMGSGSLAAMSVFESQWRPKLSKSEAIELVVLAIH--AGIFNDLGSGSNCDVC 212

Query: 184 TLKVG 188
            ++  
Sbjct: 213 VIEKD 217


>gi|255547772|ref|XP_002514943.1| proteasome subunit beta type 5,8, putative [Ricinus communis]
 gi|223545994|gb|EEF47497.1| proteasome subunit beta type 5,8, putative [Ricinus communis]
          Length = 249

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 8/145 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 56  KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L N   M L         D+T   +     +
Sbjct: 115 NLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMVAGWDETGPGLYYVDSE 174

Query: 127 VLEPENGVMAIGSGGSYALSAARAL 151
               +    ++GSG  YA     + 
Sbjct: 175 GGRLKGTRFSVGSGSPYAYGVLDSG 199


>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
 gi|302595733|sp|A1RX71|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
          Length = 204

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 11/182 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T + +R    VV+A + +VS G  +M  + +KV R+     +A  AG  AD  TL   +
Sbjct: 6   GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMA-SAGLMADMQTLARIV 64

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVL 128
           E ++  Y      S         +   L         A       D+  + + +      
Sbjct: 65  EAEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGSHLYSLDPIGA 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             E+  +A+GSG   A+S   +      S +E   +A K++  A      +   + +  +
Sbjct: 125 IIEDDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAASGDGVDVLVI 184

Query: 186 KV 187
             
Sbjct: 185 GK 186


>gi|289580197|ref|YP_003478663.1| 20S proteasome A and subunit betas [Natrialba magadii ATCC 43099]
 gi|289529750|gb|ADD04101.1| 20S proteasome A and B subunits [Natrialba magadii ATCC 43099]
          Length = 250

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 65/184 (35%), Gaps = 9/184 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TT + +     VV+A D + SLG   V    ARKV  +G    +  FAGS  +A T + 
Sbjct: 13  GTTTVGLVGADGVVLAADTRASLGGRFVTNRTARKVVPVGDHTAL-TFAGSVGEAQTFVR 71

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           +L  +  +Y +   R+             +         ++L        V         
Sbjct: 72  QLRAERSRYEHATDRTPSVETTATVAGDLLRGGPYQHLELVLGGTFPEPAVYQVGPGGGV 131

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLK 186
            +    A GSG   A           +S +    +A  A+  A +    +   + + TL 
Sbjct: 132 MDTPYAASGSGMQLAYGRLEDAYEPDHSVDTLRGLATTAIRNATERDTASGDGMTVATLT 191

Query: 187 VGDE 190
           V ++
Sbjct: 192 VDED 195


>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
           melanoleuca]
 gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
          Length = 241

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G +V   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSVHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|260940012|ref|XP_002614306.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238852200|gb|EEQ41664.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 269

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 10/182 (5%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+  +  G VVIA D + + G  V   N  K+ RL      AG AG++AD   + + +  
Sbjct: 32  IVGCKFAGGVVIAADTRATAGSIVADKNCEKLHRLAPRIWCAG-AGTAADTEMVTQLIAS 90

Query: 78  KLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPE 131
            LE +     R    +         + KY  +L A +++A  D T   +++         
Sbjct: 91  NLELHSMWESRQPRVITALTLLKQHLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHGSTDV 150

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETLKVG 188
               ++GSG   A++          + +E  +  A +I A I   + +  N+ +  ++VG
Sbjct: 151 GEYQSLGSGSLAAMAVLETHWKPDMTRDEAVKLCADAIEAGIWNDLGSGSNVDVCVMEVG 210

Query: 189 DE 190
            +
Sbjct: 211 KD 212


>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|302595814|sp|B1L6X8|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 198

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 65/183 (35%), Gaps = 12/183 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T L +R DG VV+A D +VS    ++  +ARKV  + +   ++  AG   D   L++ L+
Sbjct: 5   TALGLRFDGGVVLAADRRVSYNGFILSKSARKVFLINERVGVST-AGLPGDFQELVDVLK 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLVITGMGDVL 128
             +  Y  +  +++        +   L       +          D +   +        
Sbjct: 64  YNITMYELENEKAATPTNVAKLLSILLYQGRFSGIYYAELVVGGIDNSGPKIFVLDPAGG 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E    A+GSG   A            S   A E+A +AM  A      +   I L  +
Sbjct: 124 LMEENFSAVGSGAQIATGILERFFKEGMSEKEAVELAERAMREAISRDALSGDGIDLLII 183

Query: 186 KVG 188
              
Sbjct: 184 TSK 186


>gi|241959538|ref|XP_002422488.1| multicatalytic endopeptidase complex subunit, putative; proteasome
           component precursor, putative [Candida dubliniensis
           CD36]
 gi|223645833|emb|CAX40496.1| multicatalytic endopeptidase complex subunit, putative [Candida
           dubliniensis CD36]
          Length = 272

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  +    VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGCKFKNGVVIAADTRATSGPIVADKNCEKLHRLAPKIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    +A        + KY  +L A +++A  D T   +++      
Sbjct: 88  IASNLELHALSQNRQPRVIAALTMLKQHLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
                  ++GSG   A++          +   A ++   A+       + +  N+ +  +
Sbjct: 148 TDIGKYQSLGSGSLNAMAVLETNFKDDMTRDEAIKLCSDAILAGVWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           +VG +
Sbjct: 208 EVGKD 212


>gi|315518854|dbj|BAJ51755.1| proteasome subunit, beta type 10 [Oryzias celebensis]
 gi|315518865|dbj|BAJ51762.1| proteasome subunit, beta type 10 [Oryzias matanensis]
          Length = 261

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 27  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTQKTTDL 85

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 86  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 145

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+++ R A+       + + +NI +  +
Sbjct: 146 VDKMPYLAMGSGDLAALGILEDGFKIDLELEEAKKLVRDAVHSGIMSDLGSGNNIDICVI 205

Query: 186 KVG 188
              
Sbjct: 206 TSK 208


>gi|294889671|ref|XP_002772914.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
 gi|239877494|gb|EER04730.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
          Length = 204

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 70/189 (37%), Gaps = 13/189 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI+ ++    VV+  D + S G  V    +RKV RL     +   +GS+AD   L 
Sbjct: 5   YTGTTIMAMKFKDGVVLGADSRTSTGGYVANRVSRKVTRLHDRIFVC-RSGSAADTQFLS 63

Query: 73  ERLEKKLEQYPNQLL----RSSVELAKDWRM--DKYLRNLEAMILIADKTI---TLVITG 123
            +++  L  + N L           A   R+      + L A +++A         V + 
Sbjct: 64  SKVKYFLNAHANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLIVAGWDQTEGPQVYSI 123

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
                  +  +   GSG +Y       L     S   AE+   KA++ A      +   I
Sbjct: 124 PLGGTIIKQNIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKAVAHAMARDGSSGGVI 183

Query: 181 VLETLKVGD 189
            + T+   D
Sbjct: 184 RVTTVTEKD 192


>gi|54696302|gb|AAV38523.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
 gi|54696304|gb|AAV38524.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
 gi|61367228|gb|AAX42969.1| proteasome subunit beta type 1 [synthetic construct]
 gi|61367236|gb|AAX42970.1| proteasome subunit beta type 1 [synthetic construct]
          Length = 242

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|145593571|ref|YP_001157868.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
 gi|302595708|sp|A4X3P0|PSB1_SALTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PrcB 1; Flags: Precursor
 gi|145302908|gb|ABP53490.1| 20S proteasome, A and B subunits [Salinispora tropica CNB-440]
          Length = 282

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G V++AGD + ++G  +   +  K+      + + GFAG+   +  +  
Sbjct: 47  HGTTIVAATFAGGVLLAGDRRTTMGNLIAGRDVDKLTITDDYSAV-GFAGTVGISIDMTR 105

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   ++    M      +I L I            
Sbjct: 106 LFVVELEHYEKIEGVPLSLEGKSNRLAAIVKGNLPMANAGMVSIPLFIGYDLEASDPARA 165

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIA--RKAMSIAADI 172
                    G   E ++G  +IGSG  +A S+ + L     + A  ++   +A+  AAD 
Sbjct: 166 GRIVSFDAIGARYEEKSGYQSIGSGSPFAKSSLKKLHDPGSDDAATLSALIEALYDAADD 225

Query: 173 CVYTNH 178
              T  
Sbjct: 226 DSATGG 231


>gi|109073355|ref|XP_001084784.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Macaca
           mulatta]
          Length = 241

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex [Metallosphaera sedula DSM 5348]
 gi|302595852|sp|A4YIE0|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
           peptidase, MEROPS family T01A [Metallosphaera sedula DSM
           5348]
          Length = 217

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 10/185 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     V++A D + S G  V     RK+  +     +   AGS AD   + 
Sbjct: 19  LKGTTTVGLVVKDAVILAADRRASAGFFVANKMVRKIVYIDDRIGMTT-AGSVADLQFIY 77

Query: 73  ERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
             ++           R       +  L      +KY   L  +++    T   +      
Sbjct: 78  NYMKNIYHYNLISGNRPVTVKSLATYLTNILSQNKYFPYLVQILMGGYDTQPRLFNLDYL 137

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E   +A GSG   A+       S   +   A ++A +A+  A     +T   +++ 
Sbjct: 138 GDMTEETYVATGSGSPVAMGVLEDGYSPDLTGDQAMDLAARAVMSAIKRDSFTGTGVIVT 197

Query: 184 TLKVG 188
            +   
Sbjct: 198 KITKE 202


>gi|296483812|gb|DAA25927.1| proteasome beta 1 subunit precursor [Bos taurus]
          Length = 241

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALKVCIVTKE 229


>gi|303390653|ref|XP_003073557.1| proteasome subunit beta type-7 [Encephalitozoon intestinalis ATCC
           50506]
 gi|303302704|gb|ADM12197.1| proteasome subunit beta type-7 [Encephalitozoon intestinalis ATCC
           50506]
          Length = 227

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 13/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ ++    V++A D + + G  V   N  K+ R+    +  G AG++ADA  +   
Sbjct: 6   GTTIVGMKYKTGVILAADTRSTQGPVVSDKNCEKIHRISDKIMCCG-AGTAADAERVARM 64

Query: 75  LEKKLEQYPNQLLRSS----VELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
             ++L  +  +  R+             + KY   + A +++   D     ++       
Sbjct: 65  ASRELRLFERKYFRAPLVSHFRKVCVNHLHKYGGQIGAALIVGGIDSEGCHLLDIHPHGS 124

Query: 129 EPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADI--CVYTNHNIVLET 184
                  ++GSG   A+    +      +N A E+A  A+   A I   +Y+  NI +  
Sbjct: 125 SNSTLFTSLGSGSLAAIGVLESKYRAMDKNEAIELACDAVQ--AGILNDLYSGSNIDVCV 182

Query: 185 LK 186
           + 
Sbjct: 183 ID 184


>gi|301104168|ref|XP_002901169.1| proteasome subunit beta type-6, putative [Phytophthora infestans
           T30-4]
 gi|262101103|gb|EEY59155.1| proteasome subunit beta type-6, putative [Phytophthora infestans
           T30-4]
          Length = 218

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ VR +G VV+  D + S G  V    + K+  L         +GS+AD   L + 
Sbjct: 20  GTSIIAVRFNGGVVLGADSRTSTGTYVANRVSDKLTPLHDRLFCC-RSGSAADTQALSDY 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L  +  +L R                     L A I++A         V +     
Sbjct: 79  VRYYLSSHSVELGRLPKVGTAANLFRSLCYHNKDRLLAGIIVAGWDPVKGGQVFSIPIGG 138

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              E      GSG +Y      +      + EE     +KA++ A      +   I   T
Sbjct: 139 AMVEQDFAIGGSGSTYIYGLVDSEYRPNMTKEECQRFVKKALAHAMARDGSSGGVIRTVT 198

Query: 185 LKVGD 189
           +   +
Sbjct: 199 ITENE 203


>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
 gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
          Length = 235

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 63/203 (31%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +     ++  TI+ V  D   ++AGD ++S G  +   +  K+ +L +   + G  G  
Sbjct: 22  HRFDPYTLNGGTIVGVAGDNFAILAGDTRLSEGFMIHSRDTSKIYKLTEKTFL-GTCGFQ 80

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--------TI 117
            D  TL   L  +L  Y  +  +     A    +   L                      
Sbjct: 81  GDVLTLTRLLNARLTMYEFEHRKKMSSTAISQMLSTVLYYRRFFPYYTFNILAGIDTDGK 140

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIARKA 165
             + +        ++   A G+  S         +             T + A  + +  
Sbjct: 141 GCIYSYDAVGNYEKHTYHASGTASSMLQPLLDNQVGYLNQEGVRRVPLTIDKARTLIKDV 200

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              A +  +YT  ++ + T+   
Sbjct: 201 FISATERDMYTGDSLHIVTITSD 223


>gi|84370111|ref|NP_001033628.1| proteasome subunit beta type-1 precursor [Bos taurus]
 gi|108860905|sp|Q2TBX6|PSB1_BOVIN RecName: Full=Proteasome subunit beta type-1; Flags: Precursor
 gi|83638719|gb|AAI09495.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Bos taurus]
          Length = 241

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALKVCIVTKE 229


>gi|154333595|ref|XP_001563054.1| proteasome beta-1 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134060064|emb|CAM37377.1| putative proteasome beta-1 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 283

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 61/185 (32%), Gaps = 11/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTIL V   G VV+A D + S G  V+   + K+ +L K  I    +GS+AD   L ER
Sbjct: 54  GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTK-KIYCCRSGSAADTQALAER 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y   +              K        I                V +     
Sbjct: 113 VSNYLGSYQTDVGTEVNVATAANLFHKMCYMNRWNISAGIIVAGYDPINGGSVYSIPSGG 172

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
              +      GSG  +  S   A      S  E     ++A++ A      +   I   T
Sbjct: 173 SCVKLDYALGGSGSIFLYSFFDANYKPDMSKSECVAFCQRAVAHAFSRDGSSGGLIRTIT 232

Query: 185 LKVGD 189
           L  G+
Sbjct: 233 LDAGE 237


>gi|194764045|ref|XP_001964142.1| GF21399 [Drosophila ananassae]
 gi|190619067|gb|EDV34591.1| GF21399 [Drosophila ananassae]
          Length = 293

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 65/180 (36%), Gaps = 13/180 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + V+  G +++A D + + G  +   + + V  +   +++A  AG +AD    L  
Sbjct: 69  GTTTVGVQYQGGIILAADSRTTNGSYISSQSVKGVIEISD-SMLATMAGRAADCTYWLRV 127

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVITGMG 125
           L ++      +  ++    A    +           L            K    +     
Sbjct: 128 LRRECRLQELRYKQTLSVTATSKIIFNICYRHRKRGLDLGVILAGHGGVKDELELYYVDS 187

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVL 182
           D    +  + ++GSG   A     A    +   E   E+ ++A+  +A     +  ++V+
Sbjct: 188 DGYRQKGKLFSVGSGSEVAYRILDAEYDWEMKDEVVHELVQRAIYSSALQDAISGGSVVV 247


>gi|148362159|gb|ABQ59681.1| PSMB10a [Salmo salar]
 gi|209733814|gb|ACI67776.1| Proteasome subunit beta type-7 precursor [Salmo salar]
          Length = 277

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  +     VV+  D + + G+ V      K+  +       G AG++AD 
Sbjct: 38  KPMKT-GTTIAGLVCKEGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCG-AGTAADT 95

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
               + L   L  +     R+   +     +   L           ++   D T   + T
Sbjct: 96  EKTTDLLSSNLTIFSMNSGRNPRVVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYT 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +A+GSG   AL               A+E+ R A+       + + +N
Sbjct: 156 VGPYGSIDNVQYLAMGSGDLAALGILEDRFKPNMEMEEAKELVRDAIHSGIMSDLGSGNN 215

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 216 IDICVITKQ 224


>gi|302038355|ref|YP_003798677.1| proteasome subunit beta [Candidatus Nitrospira defluvii]
 gi|300606419|emb|CBK42752.1| Proteasome, beta subunit [Candidatus Nitrospira defluvii]
          Length = 274

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 66/180 (36%), Gaps = 17/180 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+L ++     +IAGD + + G  +      KV R+   + +A  AG++     + + 
Sbjct: 55  GTTVLALKYRDGAIIAGDRRATEGFQIADRRIEKVFRIDDYSAMA-IAGAAGPCIEMAKL 113

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG--------- 125
            + +LE Y            K  ++ + ++    M+      + L +             
Sbjct: 114 FQTELEHYEKLEGVQLSCEGKANKLGQMVKANLPMVFQGLVVMPLYVGYDLKRNEGRIFK 173

Query: 126 ----DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK---AMSIAADICVYTNH 178
                    E+   +IGSGG  A +  R    +    EE  R    A+  AAD  V T  
Sbjct: 174 YDITGGRYEESDHHSIGSGGKDARNTMREHYRSGLQEEEALRVGLLALYNAADEDVGTGG 233


>gi|4506193|ref|NP_002784.1| proteasome subunit beta type-1 precursor [Homo sapiens]
 gi|55666609|ref|XP_528628.1| PREDICTED: proteasome beta 1 subunit isoform 5 [Pan troglodytes]
 gi|114610308|ref|XP_001140101.1| PREDICTED: proteasome subunit beta type-1 isoform 4 [Pan
           troglodytes]
 gi|332825501|ref|XP_003311646.1| PREDICTED: proteasome subunit beta type-1 [Pan troglodytes]
 gi|130853|sp|P20618|PSB1_HUMAN RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Macropain subunit C5; AltName: Full=Multicatalytic
           endopeptidase complex subunit C5; AltName:
           Full=Proteasome component C5; AltName: Full=Proteasome
           gamma chain; Flags: Precursor
 gi|220026|dbj|BAA00658.1| proteasome subunit C5 [Homo sapiens]
 gi|3790135|emb|CAA20287.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
           sapiens]
 gi|18088777|gb|AAH20807.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
           sapiens]
 gi|54696306|gb|AAV38525.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
           sapiens]
 gi|56001062|emb|CAI19555.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
           sapiens]
 gi|61357229|gb|AAX41355.1| proteasome subunit beta type 1 [synthetic construct]
 gi|197692325|dbj|BAG70126.1| proteasome beta 1 subunit [Homo sapiens]
 gi|197692585|dbj|BAG70256.1| proteasome beta 1 subunit [Homo sapiens]
 gi|261860708|dbj|BAI46876.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
          Length = 241

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
          Length = 237

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 65/203 (32%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +GS 
Sbjct: 24  HRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGSH 82

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + ++ +L+ Y +   +     A    +   L             I  +     
Sbjct: 83  GDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS-----------AEEIARKA 165
               +         +   A GS  +         +                 A ++ +  
Sbjct: 143 GAVYSFDPVGPYQRDTYKAGGSASAMLQPLLDNQIGFKNMEGVQHLPLSQEKAVQLVKDV 202

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 203 FISAAERDVYTGDALRICIVTKD 225


>gi|170585560|ref|XP_001897550.1| Proteasome A-type and B-type family protein [Brugia malayi]
 gi|158594857|gb|EDP33434.1| Proteasome A-type and B-type family protein [Brugia malayi]
          Length = 273

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 70/194 (36%), Gaps = 10/194 (5%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           MG K   +K   TTI+       +V+  D + + G  +   +  KV +L       G AG
Sbjct: 31  MGVKAPMMKSTGTTIVATTYKDGLVMGADSRATAGNIIADKHCEKVHKLTDSIYACG-AG 89

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA--DKTI 117
           ++AD   + + L  +L        + +  +    R    +  Y+ ++ A +LI   D T 
Sbjct: 90  TAADLNQVTKMLSAQLRLLELNTGKKARVVTALRRAKQHLFSYMGHVGAYLLIGGVDPTG 149

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +     +         + GSG   A +       T  + EE   + R A+        
Sbjct: 150 PHLYQCSANGYTQSKPFASEGSGSYAATTILERDFKTNMTQEEAVLLVRHALEAGMHGDN 209

Query: 175 YTNHNIVLETLKVG 188
            + +++    +   
Sbjct: 210 ASGNSLNFVIITPE 223


>gi|145559628|gb|ABP73653.1| SalI [Salinispora tropica]
          Length = 278

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+     G V++AGD + ++G  +   +  K+      + + GFAG+   +  +  
Sbjct: 43  HGTTIVAATFAGGVLLAGDRRTTMGNLIAGRDVDKLTITDDYSAV-GFAGTVGISIDMTR 101

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   ++    M      +I L I            
Sbjct: 102 LFVVELEHYEKIEGVPLSLEGKSNRLAAIVKGNLPMANAGMVSIPLFIGYDLEASDPARA 161

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIA--RKAMSIAADI 172
                    G   E ++G  +IGSG  +A S+ + L     + A  ++   +A+  AAD 
Sbjct: 162 GRIVSFDAIGARYEEKSGYQSIGSGSPFAKSSLKKLHDPGSDDAATLSALIEALYDAADD 221

Query: 173 CVYTNH 178
              T  
Sbjct: 222 DSATGG 227


>gi|59275962|dbj|BAD89549.1| proteasome subunit [Oncorhynchus mykiss]
 gi|225705848|gb|ACO08770.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
 gi|306494797|gb|ADM95869.1| PSMB10 [Oncorhynchus mykiss]
          Length = 277

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 61/189 (32%), Gaps = 11/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  V     VV+  D + + G+ V      K+  +       G AG++AD 
Sbjct: 38  KPMKT-GTTIAGVLCKNGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCG-AGTAADT 95

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
               + L   L  +     R+   +     +   L           ++   D T   +  
Sbjct: 96  EKTTDLLSSNLTIFSMNSGRNPRVVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYK 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +A+GSG   AL               A+E+ R A+       + + +N
Sbjct: 156 VGPYGSIDNVPYLAMGSGDLAALGILEDRFKANMEMEEAKELVRDAIHSGIMSDLGSGNN 215

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 216 IDICVITKQ 224


>gi|284991133|ref|YP_003409687.1| 20S proteasome subunits A and B [Geodermatophilus obscurus DSM
           43160]
 gi|302595825|sp|D2S6E2|PSB_GEOOG RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|284064378|gb|ADB75316.1| 20S proteasome A and B subunits [Geodermatophilus obscurus DSM
           43160]
          Length = 280

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 21/185 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI++V  DG V++ GD + ++G  +      KV      ++  G AG++  A  ++ 
Sbjct: 52  HGTTIVSVTYDGGVLMGGDRRATMGNLISSREIEKVYPADAWSV-IGIAGAAGIAIEMVR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
             + +LE Y      +     K  R+ + +R      L     + L              
Sbjct: 111 LYQVELEHYEKIEGLTLSLDGKANRLAQMIRGNLGAALQGLAVVPLFAGFDLDAAPGAAP 170

Query: 126 ---------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
                         E G  A+GSG  +A ++ +         +   R   +A+  AAD  
Sbjct: 171 GRIFSYDVTGGNYEERGYSAVGSGSLFARNSLKKTWRPNLDGDAATRSLVEALYDAADDD 230

Query: 174 VYTNH 178
             T  
Sbjct: 231 SATGG 235


>gi|146147387|gb|ABQ01990.1| proteasome subunit beta type 10 [Salmo salar]
          Length = 277

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  +     VV+  D + + G+ V      K+  +       G AG++AD 
Sbjct: 38  KPMKT-GTTIAGLVCKEGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCG-AGTAADT 95

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
               + L   L  +     R+   +     +   L           ++   D T   + T
Sbjct: 96  EKTTDLLSSNLTIFSMNSGRNPRVVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYT 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +A+GSG   AL               A+E+ R A+       + + +N
Sbjct: 156 VGPYGSIDNVQYLAMGSGDLAALGILEDRFKPNMEMEEAKELVRDAIHSGIMSDLGSGNN 215

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 216 IDICVITKQ 224


>gi|114610312|ref|XP_001139526.1| PREDICTED: proteasome beta 1 subunit isoform 1 [Pan troglodytes]
          Length = 242

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 67/203 (33%), Gaps = 22/203 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEEER 147

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKA 165
               +         +   A GS  +         +  +N             A  + +  
Sbjct: 148 GAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDV 207

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 208 FISAAERDVYTGDALRICIVTKE 230


>gi|296199648|ref|XP_002747247.1| PREDICTED: proteasome subunit beta type-1-like [Callithrix jacchus]
          Length = 241

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|297379707|gb|ADI34594.1| ATP-dependent protease hslV [Helicobacter pylori v225d]
          Length = 136

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/136 (44%), Positives = 91/136 (66%), Gaps = 2/136 (1%)

Query: 52  LGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL 111
           +    +++GFAGS+ADAF+L +  E+ LE     L +S V+ +K+WR DKYLR LEAM++
Sbjct: 1   MYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLFKSVVDFSKEWRKDKYLRRLEAMMI 60

Query: 112 IADKTITLVITGMGDVLE-PENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIA 169
           + +     +++G GDVLE  +N + AIGSGG++ALSAARAL S       ++  +++ IA
Sbjct: 61  VLNLDHIFILSGTGDVLEAEDNKIAAIGSGGNFALSAARALDSFAHLEPRKLVEESLKIA 120

Query: 170 ADICVYTNHNIVLETL 185
            D+C+YTN NI +  L
Sbjct: 121 GDLCIYTNTNIKILEL 136


>gi|219125785|ref|XP_002183153.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405428|gb|EEC45371.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 197

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 17/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+    G +V A D + SLG  V     +KV  +    ++   AG +AD    + 
Sbjct: 5   HGTTTLSFVFQGGIVAAVDSRASLGSFVGSKTTQKVLPINSH-MLGTMAGGAADCSFWIR 63

Query: 74  RLEKKLEQYPNQL-LRSSVELAKDWRMDKYLRNLEAMILIADKTITL------------V 120
           +L+ +   +   L  R          +   L +   + L     +              +
Sbjct: 64  KLQGEAAMHVLTLDGRRMSVARASRLLSNALYDNRKLGLSVGTMVMGFDDTETKSSRARI 123

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E  V A+GSG ++AL           +   A  +  KA+  A     Y+ 
Sbjct: 124 FYVDNSGTRIEGDVFAVGSGSTFALGILDTEKRHDLTVDEAVALGLKAIRHATFRDAYSG 183

Query: 178 HNIVLETLKVG 188
             I +  +   
Sbjct: 184 GFINVYLITHE 194


>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex, beta component [Desulfurococcus
           mucosus DSM 2162]
 gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
           mucosus DSM 2162]
          Length = 209

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 11/182 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T + ++    VV+A + ++S    V+  NARK+  +    +  GFAG   D   L++ L
Sbjct: 8   GTAIGLKTSEGVVLAAEKRLSYDGFVLSRNARKIHMVTDH-VGVGFAGLMGDVGFLVKVL 66

Query: 76  EKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIA-----DKTITLVITGMGDVL 128
             + + Y  Q  R   +  +AK   +  Y   L  M+        D     +        
Sbjct: 67  RLEAKNYELQHGREIRARSMAKLLSLILYNYKLAPMLTEVVVGGFDDEGPSLYILDPVGS 126

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E   +A+GSG   AL       S   +   AEE+A  A+    +  V +   I L T+
Sbjct: 127 LIEEKYVAVGSGAQLALGYIEPRYSPSITLAEAEELAVNAIRTVVERDVLSGDGIDLATI 186

Query: 186 KV 187
             
Sbjct: 187 TR 188


>gi|15235889|ref|NP_194858.1| PBA1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|82581522|sp|Q8LD27|PSB6_ARATH RecName: Full=Proteasome subunit beta type-6; AltName: Full=20S
           proteasome beta subunit A-1; AltName: Full=Proteasome
           component D; AltName: Full=Proteasome subunit beta
           type-1; Flags: Precursor
 gi|2511594|emb|CAA74028.1| multicatalytic endopeptidase complex, proteasome precursor, beta
           subunit [Arabidopsis thaliana]
 gi|2827525|emb|CAA16533.1| multicatalytic endopeptidase complex, proteasome precursor, beta
           subunit [Arabidopsis thaliana]
 gi|3421099|gb|AAC32065.1| 20S proteasome subunit PBA1 [Arabidopsis thaliana]
 gi|7270032|emb|CAB79848.1| multicatalytic endopeptidase complex, proteasome precursor, beta
           subunit [Arabidopsis thaliana]
 gi|15450505|gb|AAK96545.1| AT4g31300/F8F16_120 [Arabidopsis thaliana]
 gi|16323318|gb|AAL15414.1| AT4g31300/F8F16_120 [Arabidopsis thaliana]
 gi|332660487|gb|AEE85887.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
 gi|332660489|gb|AEE85889.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
          Length = 233

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 13/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 12  GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADSQVVSDY 70

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE----- 129
           +   L Q+  Q  + +        + + L      +L     +       G  +      
Sbjct: 71  VRYFLHQHTIQHGQPATVKVSAN-LIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLG 129

Query: 130 ---PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E      GSG SY             +   AE++  KA+S+A      +   +   
Sbjct: 130 GTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 189

Query: 184 TLKVG 188
            +   
Sbjct: 190 IINSE 194


>gi|255625747|gb|ACU13218.1| unknown [Glycine max]
          Length = 233

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 14  GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVC-RSGSAADSQIVSDY 72

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                  +L+    +          +       
Sbjct: 73  VRYFLHQHTIQLGQPATVKVAANLVRLLAYNNKNFLQTGLIVGGWDKYEGGQIYGVPLGG 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG SY             +   AE++ +KA+S+A      +   +    
Sbjct: 133 TTVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAVSLAIARDGASGGVVRTVI 192

Query: 185 LKVG 188
           +   
Sbjct: 193 INSE 196


>gi|226531171|ref|NP_001152701.1| proteasome subunit beta type 1 [Zea mays]
 gi|194701432|gb|ACF84800.1| unknown [Zea mays]
 gi|195605546|gb|ACG24603.1| proteasome subunit beta type 1 [Zea mays]
 gi|195659171|gb|ACG49053.1| proteasome subunit beta type 1 [Zea mays]
 gi|223974469|gb|ACN31422.1| unknown [Zea mays]
          Length = 221

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 66/201 (32%), Gaps = 25/201 (12%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            + +  T + +      V+A D ++S+G +++  +  K+  L    ++A  +G   D   
Sbjct: 9   YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLA-SSGFQGDIKA 67

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------IT 122
           L + L  +   Y +Q  +     A    +   L         A   +  +         T
Sbjct: 68  LQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARKAM 166
                     G  A G+G +  +      +                 +++ A ++ +   
Sbjct: 128 YDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDAVTPLSESEAIDLVKDVF 187

Query: 167 SIAADICVYTNHNIVLETLKV 187
           + A +  +YT   + +  +  
Sbjct: 188 ASATERDIYTGDKLEIVVINK 208


>gi|21465654|pdb|1IRU|M Chain M, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465668|pdb|1IRU|1 Chain 1, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
          Length = 213

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 1   RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 60  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 119

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 120 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 179

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 180 ISAAERDVYTGDALRICIVTKE 201


>gi|1165123|emb|CAA56702.1| component C5 of proteasome [Mus musculus]
          Length = 225

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 13  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 71

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 72  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 131

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 132 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 191

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 192 ISAAERDVYTGDALRICIVTKE 213


>gi|297678538|ref|XP_002817127.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
 gi|297679681|ref|XP_002817653.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
          Length = 241

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYVFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
           acetivorans C2A]
 gi|74551014|sp|Q8TJB5|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
           acetivorans C2A]
          Length = 210

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 12/187 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + V     +V+A + + ++G  +    A+KV ++    +    AGS  DA  L+
Sbjct: 7   LKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDD-LVGMTTAGSVGDAQQLV 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             +  + + Y  +   S         M  +L       ++        DK    + +   
Sbjct: 66  RLVSVESQLYKMRRNESMTIKGIATLMSNFLNANRYYPMMVQLLIGGVDKNGPAIYSLDA 125

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIV 181
                 E  + A GSG   A            + +E   +A +A+  A      +  NI 
Sbjct: 126 MGGSIEETRISATGSGSPMAYGVLEDQYKEDIAVKEGLDLAIRAIHNAMKRDSASGENID 185

Query: 182 LETLKVG 188
           +  +   
Sbjct: 186 VVVITKE 192


>gi|157865801|ref|XP_001681607.1| proteasome beta-1 subunit [Leishmania major strain Friedlin]
 gi|68124905|emb|CAJ02350.1| putative proteasome beta-1 subunit [Leishmania major strain
           Friedlin]
          Length = 283

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 60/185 (32%), Gaps = 11/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTIL V   G VV+A D + S G  V+   + K+ +L +  I    +GS+AD   L ER
Sbjct: 54  GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTE-KIYCCRSGSAADTQALAER 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y   +              K        I                V +     
Sbjct: 113 VSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWNISAGIIVAGYDPINGGSVYSIPSGG 172

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
              +      GSG  +  S   A      S  E     ++A++ A      +   I   T
Sbjct: 173 SCVKLDYALGGSGSIFLYSFFDANYKPGMSKSECVAFCQRAVAHAYSRDGSSGGLIRTIT 232

Query: 185 LKVGD 189
           L   +
Sbjct: 233 LDADE 237


>gi|331226376|ref|XP_003325858.1| proteasome subunit [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309304848|gb|EFP81439.1| proteasome subunit [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 293

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  +G + +  D + + G  V   N  K+  +       G AG++AD   +   
Sbjct: 42  GTTIVGLVWEGGICLGADTRATEGPIVADKNCEKIHFISDNIRCCG-AGTAADTEFVTAM 100

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   ++ +     R    +     + ++L   +  +  A      D T   + T      
Sbjct: 101 ISSNIQLHALSTGRQPRVVTAMTMLKQHLYKYQGHVGAALVIGGVDPTGPHLFTVAPHGS 160

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++        +     A ++  +A+   A I   + +  N  + 
Sbjct: 161 TDKLPYVTMGSGSLAAMAVFETKWKPKMARQEAIDLVVQAIY--AGIFNDLGSGSNCDVC 218

Query: 184 TLKV 187
            ++ 
Sbjct: 219 VIEA 222


>gi|170035625|ref|XP_001845669.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
 gi|167877642|gb|EDS41025.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
          Length = 231

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 66/202 (32%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           + Y  + +  +++ +  D   VI  D ++S G ++      K+ RL +G ++A   G   
Sbjct: 19  QFYPYESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRLSEGTVLA-STGCWC 77

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D   L   ++ +++ Y +Q  ++    A    +   + N           +  +      
Sbjct: 78  DTLALTSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDEEGRG 137

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQN-----------SAEEIARKAM 166
              +        +    A GS G          +                 A  I +   
Sbjct: 138 VVYSYDPIGHCEKTTYRAGGSAGPLLQPVLDNQIGLKNMVGASTEPVQLAKAVSIIKDTF 197

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             A +  +YT  ++++  +   
Sbjct: 198 ISATERDIYTGDSVIINIITKD 219


>gi|47216875|emb|CAG11682.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 275

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G+ V      K+  +       G AG++AD     + 
Sbjct: 41  GTTIAGVVFKDGVVLGADTRATSGEVVADKMCAKIHHIAPNIYCCG-AGTAADTEKTTDL 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   +  +     R    +     +   L           ++   D T   +        
Sbjct: 100 LSSNMTIFSLNSGRKPRVVMAVNFLQDMLYRYHGQIGANLILGGVDCTGNHLYRVGPYGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL             EE   + R A+       + + +NI +  +
Sbjct: 160 VDKVPYLAMGSGDLAALGILEDGFKHGMEVEEAKRLVRLAIHAGIMSDLGSGNNIDICVI 219

Query: 186 KVG 188
              
Sbjct: 220 SRE 222


>gi|332264007|ref|XP_003281040.1| PREDICTED: proteasome subunit beta type-1-like [Nomascus
           leucogenys]
          Length = 241

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G +V   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYVFNGGTVLAIAGEDFAIVASDTRLSEGFSVHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|312076996|ref|XP_003141109.1| proteasome A-type and B-type family protein [Loa loa]
 gi|307763727|gb|EFO22961.1| proteasome A-type and B-type family protein [Loa loa]
          Length = 273

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 71/195 (36%), Gaps = 10/195 (5%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
            MG K   ++   TTI+       +V+  D + + G  V   +  KV +L       G A
Sbjct: 30  TMGVKPPTMRSTGTTIVAATYKDGLVMGADSRATAGNIVADKHCEKVHKLTDSIYACG-A 88

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA--DKT 116
           G++AD   + + L  +L        + +  +    R    +  Y+ ++ A +LI   D T
Sbjct: 89  GTAADLHQVTKMLSAQLRLLELNTGKKARVVTALRRAKQHLFSYMGHVGAYLLIGGVDPT 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +     +         + GSG   A +       T  + EE   + R+A+       
Sbjct: 149 GPHLYQCSANGYTQSKPFASEGSGSYAATTVLERDFKTGMAEEEAVLLVRRALEAGMHGD 208

Query: 174 VYTNHNIVLETLKVG 188
             + +++    +   
Sbjct: 209 NASGNSLNFVIITPE 223


>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex [Thermoproteus neutrophilus
           V24Sta]
 gi|302595731|sp|B1YDJ0|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Thermoproteus neutrophilus
           V24Sta]
          Length = 203

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 72/193 (37%), Gaps = 15/193 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           MG++         T + +R    VV+A + +VS G   +    +KV  +     IA  AG
Sbjct: 1   MGEEFQV----GATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIA-SAG 55

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
             AD   L + L+     Y  ++ +     A    +   + +   M   A       D+ 
Sbjct: 56  IIADMQALAKILKLNARSYELEVKKKPTVKAMAKLLSVVMFSRRFMPFYAEVLVGGVDEE 115

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +I         E+   A+G+G   A+S   A      +   A+++A +A+  A +  
Sbjct: 116 GPHLIVMDPLGSLIEDNYAALGTGAKLAVSLLDASYRPDMTVEEAKKLAVQAVKAAIERD 175

Query: 174 VYTNHNIVLETLK 186
             +   I L  + 
Sbjct: 176 PVSGGGIDLVVVD 188


>gi|29829354|ref|NP_823988.1| 20S proteasome beta-subunit [Streptomyces avermitilis MA-4680]
 gi|81719802|sp|Q82JE3|PSB1_STRAW RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PrcB 1; Flags: Precursor
 gi|29606461|dbj|BAC70523.1| putative 20S proteasome beta-subunit [Streptomyces avermitilis
           MA-4680]
          Length = 284

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 17/163 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT+L +     V+IAGD + ++G  + + +  KV        +A FAG+   A  +++
Sbjct: 53  HGTTVLALAYRDGVLIAGDRRATMGNLIAQRDLEKVHPADDYTAVA-FAGTVGLALDMVK 111

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
             + +L  +           AK  R+   +R      +     + L++            
Sbjct: 112 LYQVELAHFEKVEGVPMTLRAKATRLAGMIRQNLGQAMQGLAVVPLLVGYDLAARAGEHG 171

Query: 126 --------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                        +    A GSG  YA  A + L     S  E
Sbjct: 172 RIFSFDVTGGPYEKTDFHAEGSGSPYARGALKKLFHPGMSRRE 214


>gi|12653473|gb|AAH00508.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
           sapiens]
 gi|157928354|gb|ABW03473.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
 gi|157928990|gb|ABW03780.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
           construct]
          Length = 241

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|255722862|ref|XP_002546365.1| proteasome component PUP1 precursor [Candida tropicalis MYA-3404]
 gi|240130882|gb|EER30444.1| proteasome component PUP1 precursor [Candida tropicalis MYA-3404]
          Length = 272

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+  +    VVIA D + + G  V   N  K+ RL      AG AG++AD   + + 
Sbjct: 29  GTTIVGCKFKNGVVIAADTRATSGPIVADKNCEKLHRLAPKIWCAG-AGTAADTEMVTQL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    +A        + KY  +L A +++A  D T   +++      
Sbjct: 88  IASNLELHALSQNRQPRVIAALTMLKQHLFKYQGHLGAYLIVAGVDPTGAHLMSVQAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR-KAMSIAADI--CVYTNHNIVLETL 185
                  ++GSG   A++          + EE  +  + +I A +   + +  N+ +  +
Sbjct: 148 TDIAKYQSLGSGSLNAMAVLETYFKEDMTKEEAIKLCSDAILAGVWNDLGSGSNVDVCVM 207

Query: 186 KVGDE 190
           +VG +
Sbjct: 208 EVGKD 212


>gi|269986877|gb|EEZ93154.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 206

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 62/185 (33%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT L +     V++A D + +    V   NA KV  +     I   AG  AD   ++  
Sbjct: 7   GTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMAISGSIGITT-AGMVADLQAMVRL 65

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN--------LEAMILIADKTITLVITGMGD 126
           +  +L  Y  +             +   L N            I+    T   + +    
Sbjct: 66  MRSELTLYEIRSGSKLDTDGAVSLLSAVLFNKRLSLNLIYGEFIVGGYDTAPKLFSIDEA 125

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLE 183
             + ++     GSGG +AL           S EE  +   KA+S +    VYT   I + 
Sbjct: 126 GGQGKDKFTVTGSGGVFALGVLEGDYKDNMSEEEAVKLAYKAISSSIRRDVYTGEGIDIA 185

Query: 184 TLKVG 188
            +   
Sbjct: 186 VINKK 190


>gi|10803371|emb|CAC13118.1| low molecular mass polypeptide subunit PSMB10 [Takifugu rubripes]
          Length = 275

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  V     VV+  D + +  + V      K+  +       G AG++AD 
Sbjct: 36  KPMKT-GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYIAPNIYCCG-AGTAADT 93

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA--DKTITLVIT 122
               + L   L  +     R    +         + +Y   + A +++   D T   +  
Sbjct: 94  QKTTDLLSSNLTIFSLNSGRKPRVVMAVNILQDTLYRYHGQIGANLILGGVDCTGNHLYK 153

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHN 179
                   +   + +GSG   AL               A E+ R A+       + + +N
Sbjct: 154 VGPYGSVDKVPYLTMGSGDLAALGILEDGFKHDMEVERATELVRLAIHAGIMSDLGSGNN 213

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 214 IDICVITRD 222


>gi|115480019|ref|NP_001063603.1| Os09g0505600 [Oryza sativa Japonica Group]
 gi|17380182|sp|O64464|PSB1_ORYSJ RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
           proteasome alpha subunit F; AltName: Full=20S proteasome
           subunit beta-6
 gi|3138799|dbj|BAA28276.1| beta 6 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|113631836|dbj|BAF25517.1| Os09g0505600 [Oryza sativa Japonica Group]
 gi|125606253|gb|EAZ45289.1| hypothetical protein OsJ_29931 [Oryza sativa Japonica Group]
 gi|215686333|dbj|BAG87594.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215736983|dbj|BAG95912.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 221

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 63/201 (31%), Gaps = 25/201 (12%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            + +  T + +      V+A D ++S+G  ++  +  K+  L     +A  +G   D   
Sbjct: 9   YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALA-SSGFQGDIKA 67

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------IT 122
           L + L  +   Y +Q  +     A    +   L         A   +  +         T
Sbjct: 68  LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARKAM 166
                     G  A G+G +  +      +                 ++  A ++ +   
Sbjct: 128 YDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVF 187

Query: 167 SIAADICVYTNHNIVLETLKV 187
           + A +  +YT   + +  +  
Sbjct: 188 ASATERDIYTGDKLEIVVINK 208


>gi|290559800|gb|EFD93124.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 206

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 63/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT L +     V++A D + +    V   NA KV  +     +   AG  AD   ++  
Sbjct: 7   GTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMSISSNIGVTT-AGMVADLQAMVRL 65

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN--------LEAMILIADKTITLVITGMGD 126
           +  +L  Y  +             +   L N            I+    T   + +    
Sbjct: 66  MRSELTLYEIRAGSKLDTDGAVSLLSAVLFNKRLSLNLIYGEFIIGGYDTEPKLFSIDEA 125

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
             + ++     GSGG +AL           + EE   +A KA+S +    VYT   + + 
Sbjct: 126 GGQGKDKFTVTGSGGVFALGVLEGDYKDNMTEEEGIKLAYKAISSSIRRDVYTGEGVDIA 185

Query: 184 TLKVG 188
            +   
Sbjct: 186 VINKK 190


>gi|315518874|dbj|BAJ51768.1| proteasome subunit, beta type 10 [Oryzias marmoratus]
          Length = 261

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 27  GTTIAGVVFKDGVVLGADTRATSSEVVADKLCAKIHYISPNIYCCG-AGTAADTEKTTDL 85

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 86  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 145

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+++ R A+       + + +NI +  +
Sbjct: 146 VNKVPYLAMGSGDLAALGILEDGFKHDLELEEAKKLVRDAVHSGIMSDLGSGNNIDICVI 205

Query: 186 KVG 188
              
Sbjct: 206 TSK 208


>gi|313228164|emb|CBY23314.1| unnamed protein product [Oikopleura dioica]
          Length = 276

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+     +G VV+  D + + G+T+ +    K+ R+       G +G+SAD   +   
Sbjct: 45  GTTLAGCVFEGGVVMGADTRATSGETIAEKRCFKIHRITDNIYCCG-SGTSADCDQVTTM 103

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
              K+E +     R+        ++ ++L   +        +   D     VI       
Sbjct: 104 TSTKMELHKLNTGRTPRVGTACRQLAQHLFYYQGHVSAGLILGGMDPAGAHVIQIHPYGS 163

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A+S          +   A+++ R A  IA+ I    Y+   + L 
Sbjct: 164 TAKLPYTTMGSGSLAAMSVLEDGWKPGMNEEQAKKLVRDA--IASGILSDGYSGSQVDLV 221

Query: 184 TLKVG 188
            +   
Sbjct: 222 VITKD 226


>gi|322497326|emb|CBZ32401.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 283

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 60/185 (32%), Gaps = 11/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTIL V   G VV+A D + S G  V+   + K+ +L +  I    +GS+AD   L ER
Sbjct: 54  GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTE-KIYCCRSGSAADTQALAER 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y   +              K        I                V +     
Sbjct: 113 VSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWNISAGIIVAGYDPINGGSVYSIPSGG 172

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
              +      GSG  +  S   A      S  E     ++A++ A      +   I   T
Sbjct: 173 SCVKLDYALGGSGSIFLYSFFDANYKPGMSKSECVAFCQRAVAHAYSRDGSSGGLIRTIT 232

Query: 185 LKVGD 189
           L   +
Sbjct: 233 LDAEE 237


>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
          Length = 241

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  RL    +I G +G   
Sbjct: 29  RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|302841986|ref|XP_002952537.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
           nagariensis]
 gi|300262176|gb|EFJ46384.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
           nagariensis]
          Length = 212

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 62/188 (32%), Gaps = 17/188 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ V  +   ++AG  ++S G +++  +A  + +L    ++A  AG  AD   L + L+
Sbjct: 14  TVVAVAGEDYCIVAGSTRMSTGFSILTRDASMLLQLTDKVVVA-SAGMQADRKALHKLLQ 72

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------ITGMGDVL 128
            +   Y +   R+    A    +   L       L     +  +                
Sbjct: 73  HRNVTYQHNHGRAMGVSAAAQLLSNTLYYNRFFPLYTFNLVAGLDEQGRGAVYNYDAIGS 132

Query: 129 EPENGVMAIGSGGSYALSAARA-LMSTQNS-------AEEIARKAMSIAADICVYTNHNI 180
              +G    GSG           L             A ++ + A   A +  +YT   +
Sbjct: 133 YERSGYFCQGSGKELIQPVLEGILRRPDVHVPFRTCMALDLVKDAFVSAGERDIYTGDKV 192

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 193 EILIITKD 200


>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
 gi|121727671|sp|Q9YES4|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
          Length = 203

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 12/186 (6%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +     T L +R +  VV+A D ++S G  ++  N +K+  +     IA FAG   D   
Sbjct: 1   MSFAGATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIA-FAGLYGDMGG 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLVIT 122
           L+  +E ++     +  + +        +   L + +                    +  
Sbjct: 60  LVRIVEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYV 119

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHN 179
                   E   +A G+G + A      +     S   A++ A +A+  +      T   
Sbjct: 120 LDPLGSIIEEDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMARDAGTGDG 179

Query: 180 IVLETL 185
           I +  L
Sbjct: 180 IDVLVL 185


>gi|37231712|gb|AAH58455.1| Proteasome (prosome, macropain) subunit, beta type 1 [Rattus
           norvegicus]
 gi|149047099|gb|EDL99819.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_a
           [Rattus norvegicus]
          Length = 240

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 28  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 86

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 87  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 146

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 147 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 206

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 207 ISAAERDVYTGDALRICIVTKE 228


>gi|18314179|ref|NP_560846.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
 gi|74561745|sp|Q8ZST5|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
          Length = 203

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + ++    VV+A + +VS G   + +  +KV  +     IA  AG  AD  TL + 
Sbjct: 8   GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIA-SAGIIADMQTLAKI 66

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           L+   + Y  ++ R     +    +   + +   M   A       D+    +I      
Sbjct: 67  LKLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGPHLIVMDPLG 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E+   A+G+G   A++          +   A+++A +A+  A +    +   I L  
Sbjct: 127 SLIEDNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVSGGGIDLAI 186

Query: 185 LKVG 188
           +   
Sbjct: 187 VDKN 190


>gi|73974057|ref|XP_532275.2| PREDICTED: similar to Proteasome subunit beta type 1 (Proteasome
           component C5) (Macropain subunit C5) (Multicatalytic
           endopeptidase complex subunit C5) (Proteasome gamma
           chain) [Canis familiaris]
          Length = 241

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|21592365|gb|AAM64316.1| multicatalytic endopeptidase complex, proteasome precursor, beta
           subunit [Arabidopsis thaliana]
          Length = 223

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 13/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 2   GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADSQVVSDY 60

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE----- 129
           +   L Q+  Q  + +        + + L      +L     +       G  +      
Sbjct: 61  VRHFLHQHTIQHGQPATVKVSAN-LIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLG 119

Query: 130 ---PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
               E      GSG SY             +   AE++  KA+S+A      +   +   
Sbjct: 120 GTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 179

Query: 184 TLKVG 188
            +   
Sbjct: 180 IINSE 184


>gi|291414594|ref|XP_002723544.1| PREDICTED: proteasome beta 1 subunit [Oryctolagus cuniculus]
          Length = 241

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 147

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 148 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHIPLTLDRAMRLVKDVF 207

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 208 ISAAERDVYTGDALRICIVTKE 229


>gi|67475302|ref|XP_653346.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56470287|gb|EAL47959.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 226

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 15/197 (7%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           D+    + +  T + ++ +  VVIA D ++S    ++  N  K+  L    +  G +G  
Sbjct: 19  DQWSPYEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTG-SGMR 77

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
           AD   L ++++  ++ Y  +  +     +    +   L +       +   +  +     
Sbjct: 78  ADIKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGK 137

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAAD 171
                        E      GSG   A     +L+        +  A  IAR  M+ A +
Sbjct: 138 AVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACE 197

Query: 172 ICVYTNHNIVLETLKVG 188
             ++T  N+ +  L   
Sbjct: 198 RDIHTGDNVEIVILNSN 214


>gi|7242197|ref|NP_035315.1| proteasome subunit beta type-1 precursor [Mus musculus]
 gi|2499837|sp|O09061|PSB1_MOUSE RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Macropain subunit C5; AltName: Full=Multicatalytic
           endopeptidase complex subunit C5; AltName:
           Full=Proteasome component C5; AltName: Full=Proteasome
           gamma chain; Flags: Precursor
 gi|1165122|emb|CAA56701.1| component C5 of proteasome [Mus musculus]
 gi|1698584|gb|AAB37251.1| proteasome beta-subunit C5 [Mus musculus]
 gi|17390820|gb|AAH18351.1| Proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
 gi|26346380|dbj|BAC36841.1| unnamed protein product [Mus musculus]
 gi|39754751|gb|AAR30867.1| proteasome beta-subunit C5 [Mus musculus]
 gi|74198429|dbj|BAE39698.1| unnamed protein product [Mus musculus]
 gi|74205097|dbj|BAE21005.1| unnamed protein product [Mus musculus]
 gi|148688516|gb|EDL20463.1| proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
          Length = 240

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 28  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 86

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 87  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 146

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 147 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 206

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 207 ISAAERDVYTGDALRICIVTKE 228


>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
 gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
          Length = 181

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 10/164 (6%)

Query: 34  QVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVEL 93
           + ++G  VM  N  K+ ++ +   +AG AG+  D  +L+  L  + + Y  ++ R     
Sbjct: 2   RATIGNMVMSKNVTKIFQIDEHLALAG-AGNVGDILSLVRMLRAETKLYRARVGREMSVK 60

Query: 94  AKDWRMD------KYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
           A            KY       ++        + +        E+  ++ GSG  +A + 
Sbjct: 61  ALATLTANILNGTKYFPYFGWFLIGGYDEKPNLYSVDMAGGMTEDKYVSAGSGMEFAYAV 120

Query: 148 ARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
                    S +E   +A KA++ A    V+T   I++  +   
Sbjct: 121 LENEYKEDMSVDEGVKLAVKAINTAIKRDVFTGDGILVVKITKE 164


>gi|224014134|ref|XP_002296730.1| 26S proteasome beta type 7 subunit [Thalassiosira pseudonana
           CCMP1335]
 gi|220968585|gb|EED86931.1| 26S proteasome beta type 7 subunit [Thalassiosira pseudonana
           CCMP1335]
          Length = 296

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 64/186 (34%), Gaps = 15/186 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +   G +V+  D + +   TV   N  K+  +       G AG++AD     E 
Sbjct: 52  GTTIVGLVYPGGIVLGADTRSTNDTTVADKNCEKIHYIAPNIYCCG-AGTAADTEKSTEL 110

Query: 75  LEKKLEQYPNQLL-RSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDV 127
           +  ++E          S  +     + + L   +        +   D     +       
Sbjct: 111 ISSQMELLRMNTGDGQSRVVTACTLLKRMLFRYQGYVSAALVLGGCDVNGPHLYQIYPHG 170

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVL 182
              +     +GSG   A++   A      S   A E+ ++++   A I   + +  N+  
Sbjct: 171 STGKLPFTTMGSGSLAAMAVFEADYRDDLSEEEAVELVKRSIL--AGIFNDLGSGSNVDT 228

Query: 183 ETLKVG 188
             ++  
Sbjct: 229 CVIRTD 234


>gi|217071334|gb|ACJ84027.1| unknown [Medicago truncatula]
          Length = 232

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 13  GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVC-RSGSAADSQVVSDY 71

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L Q+  QL + +        +         NL+  +++          +       
Sbjct: 72  VRYFLHQHTIQLGQPATVKVAANLVRLLAYNNKNNLQTGLIVGGWDKYEGGQIYGVPLGG 131

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG SY             +   AE++ +KA+S+A      +   +    
Sbjct: 132 TIVQQPFAIGGSGSSYLYGFFDQAWKDGMTKDEAEDLVKKAVSLAIARDGASGGVVRTVI 191

Query: 185 LKVG 188
           +   
Sbjct: 192 INSE 195


>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component [Methanohalophilus
           mahii DSM 5219]
 gi|302595753|sp|D5EAS6|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component [Methanohalophilus
           mahii DSM 5219]
          Length = 210

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 12/187 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     VV+A + + ++G  +    A+K+ ++    +    AGS  DA  L+
Sbjct: 7   LKGTTTVGIVCSDGVVLATEKRATMGNFIASKTAKKIYQIDD-LVGMTTAGSVGDAQQLV 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             +  + + Y  +   S         +   L       L+        DK    + +   
Sbjct: 66  RMISVESKLYKMRRQESITIKGLTTLLSNILGGQRYFPLMVQLLVGGVDKNGPAIFSLDA 125

Query: 126 DVLEPENGVM-AIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIV 181
                E     A GSG   A            + +   E+A +A+  A      + + I 
Sbjct: 126 MGGNIEETKAVATGSGSPMAYGVLEDRYHEGINVDEGMELAVRALYNAMKRDSASGNGID 185

Query: 182 LETLKVG 188
           +  +   
Sbjct: 186 VVKITAD 192


>gi|116779982|gb|ABK21503.1| unknown [Picea sitchensis]
          Length = 233

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 66/198 (33%), Gaps = 15/198 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M  M   H       TTI+ V  +G VV+  D + S G  V    + K+ +L     +  
Sbjct: 3   MDWMNAPHSM----GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYLC- 57

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKT 116
            +GS+AD+  + + +   L Q+  QL + +                   LE  +++    
Sbjct: 58  RSGSAADSQVVSDYVRYFLHQHIIQLGQPATVKVTANLIRLLSYNNKNTLETGLIVGGWD 117

Query: 117 I---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
                 +          +      GSG SY             S   AE +  K++S+A 
Sbjct: 118 KYEGGSIYGVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKEGMSKDEAEALVVKSVSLAI 177

Query: 171 DICVYTNHNIVLETLKVG 188
                +   +    +   
Sbjct: 178 ARDGASGGVVRTVVINSE 195


>gi|145590322|ref|YP_001152324.1| proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
           13514]
 gi|302595706|sp|A4WH05|PSB1_PYRAR RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|145282090|gb|ABP49672.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
           13514]
          Length = 202

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 61/185 (32%), Gaps = 12/185 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D +V+ G  +      K+ ++    + A  +G  AD   +L  L
Sbjct: 2   TTTVGIVVKDGVVLATDKRVTAGYYIAHKKGEKLWKIDDH-VAATMSGGVADLQNILSFL 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------ITGMGDV 127
             +  +Y  Q  R     A    M   L      + +    I  V               
Sbjct: 61  TVRAREYKTQFRRPIPIRALVNYMSLILFYSRPYVYVVHSIIGGVDEEEGAVMYMVDWLG 120

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +   +A GSG  YA            +   A ++A  A+  A      +   I + T
Sbjct: 121 TVTKEKYVATGSGSPYAKGVLEVGYRGDLTVEEAVDLAINAIKAAIRNDPGSGEGIDVVT 180

Query: 185 LKVGD 189
           +   D
Sbjct: 181 ITKRD 185


>gi|324521809|gb|ADY47931.1| Proteasome subunit beta type-7 [Ascaris suum]
          Length = 273

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 72/197 (36%), Gaps = 10/197 (5%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M  MG K   ++   TTI+       +V+  D + + G  +   +  KV +L +     G
Sbjct: 28  MAEMGVKPPTLRSTGTTIVAATYKDGLVMGADSRATAGNIIADKHCTKVHKLTESMFACG 87

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA--D 114
            AG++AD   + + L  +L        + +  +    R    + +Y+  + A +LI   D
Sbjct: 88  -AGTAADLDQVTKMLSAQLRLLELNTGKKARVVTAVRRAKQHLFQYMGYIGAYLLIGGVD 146

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
            T   +     +         ++GSG   A+S              A E+ ++A+     
Sbjct: 147 PTGPHLYECSANGTTMSKPYASMGSGSYAAISILERDFKFGMNEEEACELVQRALQAGMH 206

Query: 172 ICVYTNHNIVLETLKVG 188
               + + +    +   
Sbjct: 207 GDNASGNTLNFVIITRD 223


>gi|146079452|ref|XP_001463791.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|321399047|emb|CAM66312.2| putative proteasome beta-1 subunit [Leishmania infantum JPCM5]
          Length = 283

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 60/185 (32%), Gaps = 11/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTIL V   G VV+A D + S G  V+   + K+ +L +  I    +GS+AD   L ER
Sbjct: 54  GTTILAVSYKGGVVLAADSRTSSGTYVVNRASNKLTKLTE-KIYCCRSGSAADTQALAER 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y   +              K        I                V +     
Sbjct: 113 VSNYLGSYQTDIGADVNVATAANLFHKMCYVNRWNISAGIIVAGYDPINGGSVYSIPSGG 172

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
              +      GSG  +  S   A      S  E     ++A++ A      +   I   T
Sbjct: 173 SCVKLDYALGGSGSIFLYSFFDANYKPGMSKGECVAFCQRAVAHAYSRDGSSGGLIRTIT 232

Query: 185 LKVGD 189
           L   +
Sbjct: 233 LDAEE 237


>gi|284097534|ref|ZP_06385607.1| 20S proteasome, A and B subunits [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283830956|gb|EFC34993.1| 20S proteasome, A and B subunits [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 238

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 66/181 (36%), Gaps = 17/181 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT+L V+ +  VVI GD +   G  V      KV +    + IA  AG++     + +
Sbjct: 16  HGTTVLAVKYENGVVIVGDRRAIEGYQVASRRMEKVFKTDSHSAIA-IAGAAGPCMEMAK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
               +LE Y      S     K  R+ + ++    M++     I L +            
Sbjct: 75  LFGIELEHYEKLDGVSLSCEGKANRLGQMVKANLPMVIQGLVVIPLFVGFDLKQQEGRIF 134

Query: 126 -----DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E    A+GSGG  A    +       S   A  +A +A+  AA+  + T 
Sbjct: 135 KYDVTGGKYEETEYHAVGSGGKDARVTIKERFRKNLSQPEAISLALQAILSAAEEDLGTG 194

Query: 178 H 178
            
Sbjct: 195 G 195


>gi|225192957|dbj|BAH29694.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G     +K   TTI  V     VV+  D + +  + V      K+  +       G AG+
Sbjct: 23  GQTPKPMKT-GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGT 80

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTIT 118
           +AD     + L   L  +     R+   +     +   L           ++   D T  
Sbjct: 81  AADTEKTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGN 140

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            + T        +   +A+GSG   AL               A+++ R A+       + 
Sbjct: 141 HLYTVGPYGSVNKVPYLAMGSGDLAALGILEDGFQHDLELERAKKLVRDAVHSGIMNDLG 200

Query: 176 TNHNIVLETLKVG 188
           + +NI +  +   
Sbjct: 201 SGNNIDICVITAE 213


>gi|392868|gb|AAC46465.1| proteasome subunit [Drosophila melanogaster]
          Length = 235

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 72/205 (35%), Gaps = 23/205 (11%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                 + +  +I+ +  D   VIA D ++S G  +      K+ +L    ++ G AG  
Sbjct: 20  PDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVL-GSAGCW 78

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA------DKTI 117
           AD  +L   ++ +++ Y +  LR+    A    +    Y R      +        ++  
Sbjct: 79  ADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGK 138

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE-------------IAR 163
            +V +        +    A G+ G+         +     + E+             +A 
Sbjct: 139 GVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKEWAVSVAS 198

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
                AA+  +YT  ++++  +   
Sbjct: 199 DTFISAAERDIYTGDSVLINIITKD 223


>gi|302527206|ref|ZP_07279548.1| proteasome endopeptidase complex beta subunit [Streptomyces sp.
           AA4]
 gi|302436101|gb|EFL07917.1| proteasome endopeptidase complex beta subunit [Streptomyces sp.
           AA4]
          Length = 287

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V+IAGD + + G  +   +  KV    + + + G AG++  A  ++ 
Sbjct: 55  HGTTIVAVAFAGGVLIAGDRRATSGNLIASRDIEKVHVTDEYSAV-GIAGTAGLAVEMVR 113

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +L  Y      S     K  ++   ++    M +     + L +            
Sbjct: 114 LYAVELAHYEKIEGVSLSLDGKTNKLAGMVKANLEMAMAGLAVVPLFVGYDLEAEDAKHA 173

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
                    G   E   G  ++GSG  +A S+ + L      A+   R   +A+  AAD 
Sbjct: 174 GRIVSYDAAGGRYEEHAGYASVGSGSLFAKSSLKKLYDPDADADAAVRTALEALYDAADD 233

Query: 173 CVYTNH 178
              +  
Sbjct: 234 DTASGG 239


>gi|118346415|ref|XP_976941.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|89288453|gb|EAR86441.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 227

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   T+I+ +  DG V++  D + + G  +      KV  L +       +GS+AD  TL
Sbjct: 22  ESTGTSIMALVYDGGVLVGADSRTTSGSYIADRAQDKVDYLHERIYCL-RSGSAADTQTL 80

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGM 124
              +   L+ +  +L R              +   +  +  A       D     +    
Sbjct: 81  CSYVRYYLDVHSMELQRRPTVKTAAKLFSNLIYQYQDNLSAAVIVAGIDDNEGPSIYACQ 140

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIV 181
                 +  V   GSG  +  S   A         SA+++ + A++ A      +   I 
Sbjct: 141 PSGSCIKQQVAIGGSGSGFIFSYVDANFRPNMDLESAKKLVKTALAHAMSRDGSSGGIIR 200

Query: 182 LETLKVGD 189
           L  +   +
Sbjct: 201 LVNITKDN 208


>gi|24584895|ref|NP_724081.1| CG31742 [Drosophila melanogaster]
 gi|22953838|gb|AAN11176.1| CG31742 [Drosophila melanogaster]
 gi|68051313|gb|AAY84920.1| IP09987p [Drosophila melanogaster]
          Length = 279

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 61/175 (34%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +     G +++  D + + G+ +   +  KV ++ +  I+   AG +AD      
Sbjct: 70  HGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQY-IMGTTAGGAADCTYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------TITLVITGMGD 126
            L ++   +  +        +    +       + M L               ++    +
Sbjct: 129 ALTRECRLHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAGWSPEGPSLVYVDSN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
            L     + A+GSG   AL    +      S   A ++A  A+  A    +++  
Sbjct: 189 GLRIHGKLFAVGSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSGG 243


>gi|225718008|gb|ACO14850.1| Proteasome subunit beta type-7 precursor [Caligus clemensi]
          Length = 279

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     VV   D + + G  V      K+ +L    I  G AG+SAD   + + 
Sbjct: 41  GTTICALIYRDGVVYGADTRSTGGDMVADKAVHKIHQLAPNIIACG-AGTSADCDKVTQL 99

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  +  R S     D     R+ +Y   + A +L+   D     + +      
Sbjct: 100 IASQLKLHRPETGRQSRVATADKLLTQRLFQYQGYISAYLLVGGVDVDGPHLYSLGAHGN 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
                  A GSG   A++              A+E+ + A+   A I     +  ++ L 
Sbjct: 160 TSPKLFTATGSGMLGAMAELETRYKENMAEEEAKELVKDAIL--AGIFNDNGSGSDVNLA 217

Query: 184 TLKVGDE 190
            ++  D+
Sbjct: 218 IVRKNDD 224


>gi|226372486|gb|ACO51868.1| Proteasome subunit beta type-1-A [Rana catesbeiana]
          Length = 240

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L +  +   ++A D ++S   ++   N  K  +L    +I G +G  
Sbjct: 27  QRFSPYTFNGGTVLALAGEDFALVASDTRLSEDYSIHSRNTPKCYKLTDKTVI-GCSGFH 85

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
            D  TL + +E +L+ Y +   ++    A    +   L +           I  +     
Sbjct: 86  GDCLTLTKIIEARLKMYKHSNNKTMTSNAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGK 145

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARA--LMSTQNS----------AEEIARKA 165
               +         +   A GS  +                +          A ++ +  
Sbjct: 146 GAVYSFDPVGSYQRDAYKAGGSASAMLQPLLDNQIGYKNMQNVEHLPLTLEKALQLVKDV 205

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  VYT   + +  +   
Sbjct: 206 FISAAERDVYTGDALKISIVTKD 228


>gi|157119738|ref|XP_001659482.1| proteasome subunit beta type [Aedes aegypti]
 gi|108875198|gb|EAT39423.1| proteasome subunit beta type [Aedes aegypti]
          Length = 231

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           + Y  + +  +++ +  D   VI  D ++S G ++      K+ R+    ++A   G   
Sbjct: 19  QFYPYESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRMSDRTVLA-STGCWC 77

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D   L   ++ +++ Y +Q  ++    A    +   + N           +  +      
Sbjct: 78  DTLALTSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDADGKG 137

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAAR-----------ALMSTQNS-AEEIARKAM 166
              +        +    A GS G                   A    Q   A  I +   
Sbjct: 138 VIYSYDPIGHCEKTTYRAGGSAGPLLQPVLDNQIGLKNMVNVAPTPVQLDKAISIIKDTF 197

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             A +  +YT  ++++  +   
Sbjct: 198 ISATERDIYTGDSVIINIITKD 219


>gi|195328187|ref|XP_002030798.1| GM24382 [Drosophila sechellia]
 gi|195590871|ref|XP_002085168.1| GD12455 [Drosophila simulans]
 gi|194119741|gb|EDW41784.1| GM24382 [Drosophila sechellia]
 gi|194197177|gb|EDX10753.1| GD12455 [Drosophila simulans]
          Length = 235

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 71/205 (34%), Gaps = 23/205 (11%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                 + +  +I+ +  D   VIA D ++S G  +      K+ +L    ++ G  G  
Sbjct: 20  PDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVL-GSTGCW 78

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA------DKTI 117
           AD  +L   ++ +++ Y +  LR+    A    +    Y R      +        ++  
Sbjct: 79  ADTLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGK 138

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE-------------IAR 163
            +V +        +    A G+ G+         +     + E+             +A 
Sbjct: 139 GVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKDRAVSVAS 198

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
                AA+  +YT  ++++  +   
Sbjct: 199 DTFISAAERDIYTGDSVLINIITKD 223


>gi|219118411|ref|XP_002179979.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408236|gb|EEC48170.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 201

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +   G VV+  D + + G  V + N  K+  L       G AG++AD       
Sbjct: 7   GTTIVGLTFAGGVVLGADTRATGGTEVAEKNCEKIHYLAPNMYCCG-AGTAADTEKTTAL 65

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +LE         S  +     + + L   +        +   D     V        
Sbjct: 66  ISSQLELLRMDTHAPSRVVTACTLLKRMLFRYQGHVSAALVLGGVDVHGPHVYQIYPHGS 125

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +     +GSG   A+S   +          A  + ++A  I A I   + +  N  + 
Sbjct: 126 TSKLPYTTMGSGSLAAMSVFESSWKENMEEADAVRLVQRA--IGAGIFNDLGSGSNCDVC 183

Query: 184 TLKVG 188
            +++ 
Sbjct: 184 IIRLD 188


>gi|225193028|dbj|BAH29648.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193055|dbj|BAH29666.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 63/193 (32%), Gaps = 11/193 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G     +K   TTI  V     VV+  D + +  + V      K+  +       G AG+
Sbjct: 23  GQTPKPMKT-GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGT 80

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTIT 118
           +AD     + L   L  +     R+   +     +   L           ++   D T  
Sbjct: 81  AADTEKTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGN 140

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            + T        +   +A+GSG   AL               A+++ R A+       + 
Sbjct: 141 HLYTVGPYGSVNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMNDLG 200

Query: 176 TNHNIVLETLKVG 188
           + +NI +  +   
Sbjct: 201 SGNNIDICVITAE 213


>gi|195344758|ref|XP_002038946.1| GM17255 [Drosophila sechellia]
 gi|194134076|gb|EDW55592.1| GM17255 [Drosophila sechellia]
          Length = 279

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 60/175 (34%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +     G +++  D + + G  +   +  KV ++ +  ++   AG +AD      
Sbjct: 70  HGTTTVGFVYQGGIILCVDSRATAGNFIGSHSMHKVMQVNQY-MMGTMAGGAADCTYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------TITLVITGMGD 126
            L ++   +  +        +    +       + M +               ++    +
Sbjct: 129 ALTRECRLHELRYKERLPVRSAAKYICNVATEYKGMGICMGMMLAGWAPEGPSLVYVDSN 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
            L     + A+GSG   AL    +      S   A ++A  ++  A    +++  
Sbjct: 189 GLRLHGKLFAVGSGAPIALGILDSDYRLDLSDTEAYDLAFLSVYHATMTDIFSGG 243


>gi|17737605|ref|NP_524115.1| proteasome 26kD subunit [Drosophila melanogaster]
 gi|12643277|sp|P40304|PSB1_DROME RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Proteasome 26 kDa subunit; Flags: Precursor
 gi|7294080|gb|AAF49435.1| proteasome 26kD subunit [Drosophila melanogaster]
 gi|15291705|gb|AAK93121.1| LD24159p [Drosophila melanogaster]
 gi|220947536|gb|ACL86311.1| Pros26-PA [synthetic construct]
          Length = 235

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 72/205 (35%), Gaps = 23/205 (11%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                 + +  +I+ +  D   VIA D ++S G  +      K+ +L    ++ G AG  
Sbjct: 20  PDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVL-GSAGCW 78

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA------DKTI 117
           AD  +L   ++ +++ Y +  LR+    A    +    Y R      +        ++  
Sbjct: 79  ADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGK 138

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEE-------------IAR 163
            +V +        +    A G+ G+         +     + E+             +A 
Sbjct: 139 GVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVAS 198

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
                AA+  +YT  ++++  +   
Sbjct: 199 DTFISAAERDIYTGDSVLINIITKD 223


>gi|16758370|ref|NP_446042.1| proteasome subunit beta type-1 precursor [Rattus norvegicus]
 gi|130854|sp|P18421|PSB1_RAT RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Macropain subunit C5; AltName: Full=Multicatalytic
           endopeptidase complex subunit C5; AltName:
           Full=Proteasome component C5; AltName: Full=Proteasome
           gamma chain; Flags: Precursor
 gi|56998|emb|CAA36987.1| proteasome subunit RC5 [Rattus norvegicus]
          Length = 240

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  T+L +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 28  RFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 86

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 87  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKG 146

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAM 166
              +         +   A GS  +         +  +N             A  + +   
Sbjct: 147 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVF 206

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  VYT   + +  +   
Sbjct: 207 ISAAERDVYTGDALRICIVTKE 228


>gi|328869271|gb|EGG17649.1| proteasome subunit beta type 6 [Dictyostelium fasciculatum]
          Length = 214

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 63/185 (34%), Gaps = 11/185 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D + + G  +      K+  + +  I    +GS+AD   + + 
Sbjct: 14  GTTIMAVEFDGGVVMGADSRTTTGAYIANRVTNKITPIHE-KIYCCRSGSAADTQAISDY 72

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL-VITGMGDV 127
           +   LE +  +L    V             N +  ++        DK     V       
Sbjct: 73  VRYYLEMHTQELDDQPVVKTAASLFQLLCYNNKNNLMAGIIVAGWDKDKGGSVYNISLGG 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + EE  +    A+++A      +   I L  
Sbjct: 133 SMIKQPFAMSGSGSTYLYGHCDAQFKPGMTKEECVKFVQNALALAMFRDGSSGGVIRLCI 192

Query: 185 LKVGD 189
           +   +
Sbjct: 193 IDKEN 197


>gi|255640620|gb|ACU20595.1| unknown [Glycine max]
          Length = 207

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 65/204 (31%), Gaps = 25/204 (12%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  + + +      VIA D ++S G  ++  +  K+ +L +  ++A 
Sbjct: 1   MTKQHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMA- 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +G  AD   L + L  +   Y +Q  +     A    +   L         A       
Sbjct: 60  SSGFQADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGL 119

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQN 156
            ++    V T          G  + GSG +  +      +                 ++ 
Sbjct: 120 DNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEA 179

Query: 157 SAEEIARKAMSIAADICVYTNHNI 180
            A ++ +   + A +  +YT   +
Sbjct: 180 EAVDLVKTVFASATERDIYTGDKL 203


>gi|2062109|emb|CAA71825.1| proteasome subnuit MECL-1 [Mus musculus]
          Length = 273

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +AD       
Sbjct: 39  GTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADTEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              K+E +     R          + + L   +  +         D     +        
Sbjct: 98  AASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++          +   A+E+  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQGAAVALLEDRFQPNMTLELAQELLVEAIT--AGILSDLGSGGNVDAC 215

Query: 184 TLKVG 188
            +  G
Sbjct: 216 VITAG 220


>gi|330039093|ref|XP_003239785.1| 26S proteasome SU B5 [Cryptomonas paramecium]
 gi|327206710|gb|AEA38887.1| 26S proteasome SU B5 [Cryptomonas paramecium]
          Length = 234

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 73/196 (37%), Gaps = 12/196 (6%)

Query: 4   MGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           M +  Y +++ H TT L       ++IA D + S+G+ +     +KV  +     +   A
Sbjct: 13  MSNFFYPIQLSHGTTTLAFICSSGILIAVDSRSSMGKYIGSNKVKKVIEINSF-FLGTMA 71

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-------NLEAMILIADK 115
           G +AD F     L    + Y  Q  +          +   +        ++ A+I   D 
Sbjct: 72  GGAADCFFWERNLGCLCDLYEMQNNQHVSISGASKLLANMIYVHKNSGLSIGAIIAGWDH 131

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +     +       ++++GSG +YA            S   A  I ++++  ++  
Sbjct: 132 NGPEIYFIDSEGSRFRINIVSVGSGSTYAYGILDTDYKWNISIETACNIGKRSIFQSSYK 191

Query: 173 CVYTNHNIVLETLKVG 188
             ++  ++ L  ++  
Sbjct: 192 DPFSGGSVNLYFIRKD 207


>gi|297527496|ref|YP_003669520.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
           12710]
 gi|297256412|gb|ADI32621.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
           12710]
          Length = 215

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 11/183 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T+L ++ +  +VIAG+ +++    V+  N RKV  + K   I GFAG   DA  ++  L
Sbjct: 20  GTVLGIKANNGIVIAGEKRLTYDGYVLSKNTRKVHPITKHVGI-GFAGLVGDAQFIIRAL 78

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVL 128
             + E Y  QL R          +   L + +   L+        D     +        
Sbjct: 79  RLEAENYKLQLEREIRVRGLAKILSLLLYSYKLAPLMTEIVVGGYDDKGPQIYVLDPVGS 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E+  +A+GSGG  AL               AE++A  A+  A +    +   + +  +
Sbjct: 139 LIEDKYVALGSGGPIALGIIEKEYREDIDIDEAEKLAVSAIREAIERDAVSGDGVDVLRI 198

Query: 186 KVG 188
              
Sbjct: 199 TEE 201


>gi|71059877|emb|CAJ18482.1| Psmb10 [Mus musculus]
          Length = 273

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +AD       
Sbjct: 39  GTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADTEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              K+E +     R          + + L   +  +         D     +        
Sbjct: 98  AASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++          +   A+E+  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAIT--AGILSDLGSGGNVDAC 215

Query: 184 TLKVG 188
            +  G
Sbjct: 216 VITAG 220


>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
 gi|227830823|ref|YP_002832603.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
           islandicus L.S.2.15]
 gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
 gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
 gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
 gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
 gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
 gi|302595724|sp|D2PDG6|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595743|sp|C3MZI0|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595744|sp|C4KIR0|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595746|sp|C3NFX2|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|302595751|sp|C3MRE5|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595758|sp|C3MY41|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|302595897|sp|C3N7K2|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
           islandicus L.S.2.15]
 gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
 gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
 gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
 gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
 gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
 gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
 gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
 gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
          Length = 196

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 12/182 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + ++ +  +V+A + ++S G  V+   A+KV ++  G  +   AG   D  TL   + 
Sbjct: 7   TAIGLKVNDGIVLASERRLSYGGYVLSKQAKKVHKI--GKFLMAGAGIYGDLQTLTRIMN 64

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLE 129
            +++ Y     +     A    +   L   + M  I        D+    +         
Sbjct: 65  VEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGPQLYVLDPIGSL 124

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLK 186
            E+   A+GSG   A+    +      +   A ++  KA+  + +  + +   I L  + 
Sbjct: 125 IEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKASIERDITSGDGIDLAIMD 184

Query: 187 VG 188
             
Sbjct: 185 KK 186


>gi|328868192|gb|EGG16572.1| proteasome subunit beta type 1 [Dictyostelium fasciculatum]
          Length = 236

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 70/205 (34%), Gaps = 23/205 (11%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGS 64
            +      +  T+L V      ++AGD ++S G   +   +  KV +L    +IA  +G 
Sbjct: 21  HRFEPYVDNGGTVLAVAGSNYCIVAGDTRMSDGGYGIQTRHYTKVFKLTDKCVIAT-SGM 79

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTI 117
            AD   L +RL+ +L QY     +S    A    +   L +               D+  
Sbjct: 80  QADTIALRKRLDTQLRQYERDHGKSMSTPAIAQFLSNTLYHKRFFPFYTFNLVAGVDEDG 139

Query: 118 TLVI-TGMGDVLEPENGVMAIGSGGSYALSAARALMST----------QNSAEE---IAR 163
              + T             + GSG           +            + SAE+   + +
Sbjct: 140 IGCVWTYDAVGSHERVRFSSQGSGNQLIQPLLDNQVGKFNQQIVDGPRELSAEQALSLVK 199

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
            A++ A +  +YT     + T+   
Sbjct: 200 DAITSAGERDIYTGDFADIVTIDQK 224


>gi|5833457|gb|AAD53517.1|AF155577_1 proteasome subunit beta 12 [Danio rerio]
          Length = 279

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 42  GTTIAGVVFKDGVVLGADTRATSDEVVADKMCAKIHYIAPNIYCCG-AGTAADTEKTTDM 100

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L     M      +   D T + + T      
Sbjct: 101 LSSNLTIFSMNSGRNPRVVMAVNIIQDMLFRYRGMIGANLILGGVDCTGSHLYTVGPYGS 160

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   A+               A+ +   A+       + + +NI L  +
Sbjct: 161 MDKVPYLAMGSGDLAAMGILEDRFKVNMDLEQAKALVSDAIQAGIMCDLGSGNNIDLCVI 220

Query: 186 KVG 188
              
Sbjct: 221 TKE 223


>gi|307596440|ref|YP_003902757.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
           14429]
 gi|307551641|gb|ADN51706.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
           14429]
          Length = 216

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 66/200 (33%), Gaps = 12/200 (6%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M  +G+++    M  TT + +  +  VV+A D +V+ G  +              ++ A 
Sbjct: 1   MFTVGNENLNRLMTGTTTVGIVVNDGVVLATDRRVTAGYYIAHRKKGVKIWKIDNHVAAT 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   +L+ L     QY  +  +     A        + +    I +        
Sbjct: 61  MSGGVADLQKVLDALTATAIQYKIETGKPISIRALANYASLIVFSSRPFIYLVHMIFGGW 120

Query: 121 ITGMGDVLEP---------ENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
               G V+           E   MA GSG   A            S E+   +A +A+  
Sbjct: 121 DPDEGPVIYMLDFFGTLTRETEFMATGSGSPTAFGVLEDGYRRDMSIEDAIRLAVRAVRS 180

Query: 169 AADICVYTNHNIVLETLKVG 188
           A      +   I + T+   
Sbjct: 181 AIYHDPGSGEGIDVVTITKE 200


>gi|247300942|ref|NP_038668.2| proteasome subunit beta type-10 precursor [Mus musculus]
 gi|17380243|sp|O35955|PSB10_MOUSE RecName: Full=Proteasome subunit beta type-10; AltName: Full=Low
           molecular mass protein 10; AltName: Full=Macropain
           subunit MECl-1; AltName: Full=Multicatalytic
           endopeptidase complex subunit MECl-1; AltName:
           Full=Proteasome MECl-1; AltName: Full=Proteasome subunit
           beta-2i; Flags: Precursor
 gi|2252790|gb|AAB86994.1| Lmp10 proteasome subunit [Mus musculus]
 gi|2252792|gb|AAB87637.1| Lmp10 proteasome subunit [Mus musculus]
 gi|2547057|dbj|BAA22855.1| proteasome subunit MECL1 [Mus musculus]
 gi|2547059|dbj|BAA22856.1| proteasome subunit MECL1 [Mus musculus]
 gi|148679386|gb|EDL11333.1| proteasome (prosome, macropain) subunit, beta type 10, isoform
           CRA_c [Mus musculus]
          Length = 273

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +AD       
Sbjct: 39  GTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADTEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              K+E +     R          + + L   +  +         D     +        
Sbjct: 98  AASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++          +   A+E+  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAIT--AGILSDLGSGGNVDAC 215

Query: 184 TLKVG 188
            +  G
Sbjct: 216 VITAG 220


>gi|91772427|ref|YP_565119.1| proteasome endopeptidase complex [Methanococcoides burtonii DSM
           6242]
 gi|121689381|sp|Q12YV7|PSB_METBU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|91711442|gb|ABE51369.1| Proteasome subunit beta precursor [Methanococcoides burtonii DSM
           6242]
          Length = 210

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 12/187 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TT + +     VV+A + + ++G  +    A+K+ ++    +    AGS  DA  ++
Sbjct: 7   LKGTTTVGIVCTDGVVLATEQRATMGHFIASKTAKKIYQIDD-LVGMTTAGSVGDAQQIV 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             +  + + +  +   S         +   L       L+        DK    + +   
Sbjct: 66  RIISVESKLFKMRRQESITIKGITTLLSNMLSGQRYYPLMVQLLIGGVDKNGPAIYSLDA 125

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIV 181
                 E   ++ GSG   A        +   +  E   +A +A+  A      +  NI 
Sbjct: 126 LGGNIEETRAVSTGSGSPMAYGVLEDRYTEDMTVVEGVDLAIRALHNAMKRDSASGENID 185

Query: 182 LETLKVG 188
           +  +   
Sbjct: 186 VVVITKD 192


>gi|13435741|gb|AAH04730.1| Proteasome (prosome, macropain) subunit, beta type 10 [Mus
           musculus]
          Length = 273

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +AD       
Sbjct: 39  GTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADTEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              K+E +     R          + + L   +  +         D     +        
Sbjct: 98  AASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++          +   A+E+  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAIT--AGILSDLGSGGNVDAC 215

Query: 184 TLKVG 188
            +  G
Sbjct: 216 VITAG 220


>gi|269860537|ref|XP_002649989.1| 20S proteasome core particle subunit beta 1 [Enterocytozoon
           bieneusi H348]
 gi|220066608|gb|EED44084.1| 20S proteasome core particle subunit beta 1 [Enterocytozoon
           bieneusi H348]
          Length = 206

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 65/192 (33%), Gaps = 9/192 (4%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            +  ++   TTIL  +    ++ A D + + GQ +    + K+ ++ +  ++   +G S+
Sbjct: 2   NNEDIETTGTTILAFKYKDGIMFAADSRTTRGQFISCHYSDKITQISEN-VLCCRSGVSS 60

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI-----LIADKTITLVI 121
               L   + ++ ++                 +   +   +  +     L        + 
Sbjct: 61  HTQYLQRVIARECQKLARLEQTKFSIKKAANILGNIIYENKDYLRASLILGGQDDGFEIY 120

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNH 178
               D     +     GSG ++                 A + A + + +A +  V +  
Sbjct: 121 KIAIDGTVIPSDCAVAGSGSAFVYGYVDTYWKPNMELKDALDFAVQVVRLAINRDVASGG 180

Query: 179 NIVLETLKVGDE 190
            + + TL+  ++
Sbjct: 181 VVRVATLESNNK 192


>gi|65301424|ref|NP_571752.1| proteasome beta 10 subunit [Danio rerio]
 gi|29561858|emb|CAD87791.1| proteasome (prosome, macropain) subunit, beta type, 10 [Danio
           rerio]
 gi|62531259|gb|AAH92899.1| Proteasome (prosome, macropain) subunit, beta type, 10 [Danio
           rerio]
 gi|182889716|gb|AAI65548.1| Psmb10 protein [Danio rerio]
          Length = 281

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 44  GTTIAGVVFKDGVVLGADTRATSDEVVADKMCAKIHYIAPNIYCCG-AGTAADTEKTTDM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L     M      +   D T + + T      
Sbjct: 103 LSSNLTIFSMNSGRNPRVVMAVNIIQDMLFRYRGMIGANLILGGVDCTGSHLYTVGPYGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   A+               A+ +   A+       + + +NI L  +
Sbjct: 163 MDKVPYLAMGSGNLAAMGILEDRFKVNMDLEQAKALVSDAIQAGIMCDLGSGNNIDLCVI 222

Query: 186 KVG 188
              
Sbjct: 223 TKE 225


>gi|296863655|pdb|3MKA|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863657|pdb|3MKA|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863659|pdb|3MKA|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863660|pdb|3MKA|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863662|pdb|3MKA|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863664|pdb|3MKA|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863666|pdb|3MKA|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863668|pdb|3MKA|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863670|pdb|3MKA|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863672|pdb|3MKA|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863674|pdb|3MKA|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863676|pdb|3MKA|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863678|pdb|3MKA|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
 gi|296863680|pdb|3MKA|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           With Propetide And An T1a Mutation At Beta-Subunit
          Length = 291

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 68/186 (36%), Gaps = 22/186 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H  TI+ ++  G VV+AGD + + G  +   + RKV          G AG++A A     
Sbjct: 56  HGATIVALKYPGGVVMAGDRRSTQGNMISGRDVRKVYITDDYTA-TGIAGTAAVAVEFAR 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R   A  +     + L+             
Sbjct: 115 LYAVELEHYEKLEGVPLTFAGKINRLAIMVRGNLAAAMQGLLALPLLAGYDIHASDPQSA 174

Query: 125 ---------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    G     E G  A+GSG  +A S+ + L S     +S   +A +A+  AAD 
Sbjct: 175 GRIVSFDAAGGWNIEEEGYQAVGSGSLFAKSSMKKLYSQVTDGDSGLRVAVEALYDAADD 234

Query: 173 CVYTNH 178
              T  
Sbjct: 235 DSATGG 240


>gi|171184537|ref|YP_001793456.1| proteasome endopeptidase complex [Thermoproteus neutrophilus
           V24Sta]
 gi|302595728|sp|B1YA36|PSB1_THENV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|170933749|gb|ACB39010.1| Proteasome endopeptidase complex [Thermoproteus neutrophilus
           V24Sta]
          Length = 201

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 12/185 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D +V+ G  +      K+ ++    + A  +G  AD  ++L  L
Sbjct: 2   TTTVGIAVREGVVLATDKRVTAGYYIAHKQGEKIWKIDDH-VAATMSGGVADLQSVLSFL 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLVITGMGDV 127
             +  +Y  +  R     A    +   L      I I         D+   ++       
Sbjct: 61  TLRAREYKMEYKRPIPIRALVNYVSLILFYSRPYIYIVHSIIGGVDDEEGAVLYMADWLG 120

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +   +A GSG  YA  A         S   A ++A KA+  A      +   I +  
Sbjct: 121 TVTKERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIKAVKAAIRNDPGSGEGIDVVV 180

Query: 185 LKVGD 189
           +   +
Sbjct: 181 ITKRE 185


>gi|126309799|ref|XP_001377269.1| PREDICTED: similar to LMP2 [Monodelphis domestica]
          Length = 306

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 10/184 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TTI+ V  DG VV+  D +VS G  V+     K+  L    I    +GS+ADA  + 
Sbjct: 105 YTGTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFNKLAPL-NQQIYCALSGSAADAQAIA 163

Query: 73  ERLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGD 126
           +    +LE +  +L    + L+          KY   L A +++A  D+ +   + G  +
Sbjct: 164 DMATYQLELHGMELEEPPLVLSAANVVRNISYKYREELSAHLMVAGWDRYLGGQVYGTLE 223

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +         GSG +Y      A      S EE       A+++A      +   I L 
Sbjct: 224 GMLTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRQFTIDAITLAMGRDGSSGGVIYLV 283

Query: 184 TLKV 187
           T+  
Sbjct: 284 TITA 287


>gi|291000907|ref|XP_002683020.1| 20S proteasome [Naegleria gruberi]
 gi|284096649|gb|EFC50276.1| 20S proteasome [Naegleria gruberi]
          Length = 251

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 67/195 (34%), Gaps = 15/195 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M + H       T+I+ V  DG VVI  D + + G  +    + K+  +     +   +G
Sbjct: 41  MQEAHSM----GTSIMAVEFDGGVVIGADSRTTTGSYIANRVSDKLTPVHDRIYVC-RSG 95

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI-- 117
           S+AD   + + +   L+ +  ++    +              Y  NL A I+ A      
Sbjct: 96  SAADTQQISDYVRYFLQIHSVEVGTLPLVETAANLFKDFCYNYKDNLLAGIICAGWDEKN 155

Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
              V T        +      GSG +Y      A      + EE     R A+S+A    
Sbjct: 156 GGSVWTIPLGGSLIKEPFSIGGSGSTYIYGYCDANFKKGMTKEECKQFVRNALSLAMARD 215

Query: 174 VYTNHNIVLETLKVG 188
             +   + L  +   
Sbjct: 216 GSSGGVVRLAVITKD 230


>gi|225192960|dbj|BAH29692.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225192989|dbj|BAH29622.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193004|dbj|BAH29632.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193019|dbj|BAH29642.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|225193070|dbj|BAH29676.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  103 bits (258), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+++ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMNDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TAE 213


>gi|297206692|ref|NP_001171882.1| proteasome subunit, beta type 10 [Oryzias latipes]
 gi|62122595|dbj|BAD93263.1| PSMB10 [Oryzias latipes]
 gi|295901534|dbj|BAJ07284.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 275

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 41  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 100 LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 159

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+++ R A+       + + +NI +  +
Sbjct: 160 VNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMNDLGSGNNIDICVI 219

Query: 186 KVG 188
              
Sbjct: 220 TAE 222


>gi|115466298|ref|NP_001056748.1| Os06g0139900 [Oryza sativa Japonica Group]
 gi|55296478|dbj|BAD68674.1| putative beta 1 subunit of 20S proteasome [Oryza sativa Japonica
           Group]
 gi|113594788|dbj|BAF18662.1| Os06g0139900 [Oryza sativa Japonica Group]
 gi|125553981|gb|EAY99586.1| hypothetical protein OsI_21564 [Oryza sativa Indica Group]
 gi|125595991|gb|EAZ35771.1| hypothetical protein OsJ_20062 [Oryza sativa Japonica Group]
 gi|215679027|dbj|BAG96457.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 246

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+A D + S G  V    + K+ +L     +   +GS+AD   + E 
Sbjct: 25  GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADTQVISEY 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L+    +          + +     
Sbjct: 84  VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 143

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG SY             S   AE+   K +S+A      +   +   T
Sbjct: 144 TILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVKVVSLAIARDGASGGVVRTVT 203

Query: 185 LKVG 188
           +   
Sbjct: 204 INAD 207


>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex, beta component [Ignisphaera
           aggregans DSM 17230]
 gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
           aggregans DSM 17230]
          Length = 236

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 13/188 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TT + +     VV+A D + + G  V   N +K+ RL + + I   AG  ADA TL 
Sbjct: 29  YRGTTTVGMALKDFVVLAADKKATAGLYVAHKNVKKIVRLTENSAI-TIAGLVADAQTLA 87

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGM 124
           + +  +   Y     R     +    +   L   +    I    +          + +  
Sbjct: 88  DYIRAEAYYYYYINNRPMSIRSMASLLGLILNEYKYFPFIVQLILGGYDYYEGAKLFSID 147

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH-NI 180
                 E    A GSG   A+    +    + S   A  +  KA++ A+   V++    +
Sbjct: 148 YFGDVTEERYTATGSGSPIAIGVIESGYRPEMSIDDAVSLVVKAVATASMRDVFSGGIGV 207

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 208 DVVVIGKD 215


>gi|114626638|ref|XP_001140847.1| PREDICTED: proteasome beta 7 subunit isoform 1 [Pan troglodytes]
          Length = 259

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 32/185 (17%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N+                   AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNS-------------------ADTDMTTQL 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 84  ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 143

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
             +   + +GSG   A++            EE   +  +A  IAA I   + +  NI L 
Sbjct: 144 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLC 201

Query: 184 TLKVG 188
            +   
Sbjct: 202 VISKN 206


>gi|226507970|ref|NP_001140374.1| hypothetical protein LOC100272427 [Zea mays]
 gi|194699220|gb|ACF83694.1| unknown [Zea mays]
          Length = 395

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 174 GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADTQVISDY 232

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L+    +          + +     
Sbjct: 233 IRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 292

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG SY  +          S   AE+   K +S+A      +   +   T
Sbjct: 293 TILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDGASGGVVRTVT 352

Query: 185 LKVG 188
           +   
Sbjct: 353 INAD 356


>gi|195579820|ref|XP_002079757.1| GD24120 [Drosophila simulans]
 gi|194191766|gb|EDX05342.1| GD24120 [Drosophila simulans]
          Length = 279

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 59/175 (33%), Gaps = 11/175 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +     G +++  D + + G  +   +  K+ ++ +  ++   AG +AD      
Sbjct: 70  HGTTTVGFVYQGGIILCVDSRATAGSFIGSQSMHKIVQVNQY-MMGTMAGGAADCTYWDR 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------TITLVITGMGD 126
            L ++   +  +        +    +       + M +               ++     
Sbjct: 129 ALTRECRLHELRYKERLPVRSAAKYICNVATEYKGMGICMGMMLAGWAPEGPSLVYVDST 188

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
            L     + A+GSG   AL    +      S   A ++A  ++  A    +++  
Sbjct: 189 GLRLHGKLFAVGSGAPIALGILDSDYRLDLSDTEAYDLAFLSVYHATMTDIFSGG 243


>gi|222431909|gb|ACM50881.1| 20S proteasome beta subunit F1 [Ulva fasciata]
          Length = 241

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T++ V      +IAG  ++S G +V+      + +L +  ++A  +G   D 
Sbjct: 27  SPYDNNGGTVVAVAGSDYCIIAGSTRLSTGFSVLSREHSSLHQLSRMCVLA-SSGFEGDR 85

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            TL +RL+ +   Y +   R     A    +   L             +  +        
Sbjct: 86  ATLTKRLKSRAVMYQHSHKRPIGCEAMAQALSNELYGKRFFPFYTFNILAGLDADGTGAV 145

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------TQNS------AEEIARK 164
            +          G  A G+G           +              +      A +I R 
Sbjct: 146 YSYDAVGSYERTGYAAQGTGNDLVQPLLDNQLRAASPLVLPKKPSVTALPVERALDIVRD 205

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
           A++ A +  +YT  +I +  +   
Sbjct: 206 ALTAAGERDIYTGDSIEVWIMTKD 229


>gi|167393146|ref|XP_001740446.1| proteasome subunit beta type-1 [Entamoeba dispar SAW760]
 gi|165895460|gb|EDR23141.1| proteasome subunit beta type-1, putative [Entamoeba dispar SAW760]
          Length = 221

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 15/197 (7%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           D+    + +  T + ++ +  VV+A D ++S    ++  N  K+  L    I  G +G  
Sbjct: 14  DEWSPYEDNCGTCVVIKGEDFVVVASDTRMSRDYMILTRNDSKIYPLTSKCIFTG-SGMR 72

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
           AD   L ++++  ++ Y  +  +     +    +   L +       +   +  +     
Sbjct: 73  ADMKELTDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGK 132

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMSIAAD 171
                        E      GSG   A     +L+        +  A  IAR  M+ A +
Sbjct: 133 AVTYNYDAVGSFEERKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACE 192

Query: 172 ICVYTNHNIVLETLKVG 188
             ++T  N+ +  L   
Sbjct: 193 RDIHTGDNVEIVILNSK 209


>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP-6]
 gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP-6]
          Length = 206

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 14/186 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              TT + V  DG VV+A + + ++G  +  + A+K+ ++    +    AG   DA +L+
Sbjct: 5   FKGTTTVGVLCDGGVVLASESRATMGSFIASSQAKKIYQIDD-LVGMTTAGGVGDAQSLV 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYL--RNLEAMILI-----ADKTITLVITGM- 124
             ++ +   Y  Q        A    +   L  R     ++       D+    + +   
Sbjct: 64  RMVQVEARLYKMQRGEGLTVKAVTTMLANILSSRRYYPFMVQLIMGGVDRYGPRIYSLDA 123

Query: 125 -GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
            G  +E E  ++A GSG   A     A+     S E+   +A +A+  A      +   I
Sbjct: 124 LGGQIE-ERRIVATGSGSPVAYGVLEAMYKPGISVEDGTVLAARAIHNALKRDSASGDKI 182

Query: 181 VLETLK 186
            L  + 
Sbjct: 183 ELVRIT 188


>gi|55378523|ref|YP_136373.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
 gi|74552784|sp|Q5V1D5|PSB2_HALMA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|55231248|gb|AAV46667.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
          Length = 230

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TT + +  +  V+IA D + SLG   V     +KV ++          GS   A + + 
Sbjct: 35  GTTTVGLSTEDGVIIATDRRASLGGRFVSNKQVQKVEQIHP-TAAMTLVGSVGGAQSFIR 93

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVL 128
            L  + + Y  +        A       + R      +       D+  + V +      
Sbjct: 94  SLRAEADLYEVRRDEPLSIHALATLAGNFARGGPYFAINPIVGGVDEEGSHVYSVDPAGG 153

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E+     GSG   A            S   A ++A +A++ AA+    + + +VL  +
Sbjct: 154 VLEDDYTVTGSGTMVATGTIEGQYDHGMSLSEARDLAIRAVNAAAERDTGSGNGVVLAEI 213

Query: 186 KVG 188
              
Sbjct: 214 TDE 216


>gi|225192933|dbj|BAH29708.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+++ R A+       + + +NI +  +
Sbjct: 151 VNKVLYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMNDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TAE 213


>gi|195611928|gb|ACG27794.1| proteasome subunit beta type 1 [Zea mays]
          Length = 221

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 25/201 (12%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            + +  T + +      V+A D ++S+G +++  +  K+  L    ++A  +G   D   
Sbjct: 9   YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLA-SSGFQGDIKA 67

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------IT 122
           L + L  +   Y  Q  +     A    +   L         A   +  +         T
Sbjct: 68  LQKNLAARELLYQXQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARKAM 166
                     G  A G+G +  +      +                 +++ A ++ +   
Sbjct: 128 YDAVGSYERTGYSAQGTGSTLIMPVLDNQLKSPSPLLLPVRDAVTPLSESEAIDLVKGVF 187

Query: 167 SIAADICVYTNHNIVLETLKV 187
           + A +  +YT   + +  +  
Sbjct: 188 ASATERDIYTGDKLEIVVINK 208


>gi|94732365|emb|CAK04956.1| proteasome (prosome, macropain) subunit, beta type, 10 [Danio
           rerio]
          Length = 281

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 44  GTTIAGVVFKDGVVLGADTRATSDEVVADKMCAKIHYIAPNIYCCG-AGTAADTEKTTDM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L     M      +   D T + + T      
Sbjct: 103 LSSNLTIFSMNSGRNPRVVMAVNIIQDMLFRYHGMIGANLILGGVDCTGSHLYTVGPYGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   A+               A+ +   A+       + + +NI L  +
Sbjct: 163 MDKVPYLAMGSGDLAAMGILEDRFKVNMDLEQAKALVSDAIQAGIMCDLGSGNNIDLCVI 222

Query: 186 KVG 188
              
Sbjct: 223 TKE 225


>gi|194872539|ref|XP_001973034.1| GG15866 [Drosophila erecta]
 gi|190654817|gb|EDV52060.1| GG15866 [Drosophila erecta]
          Length = 235

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 70/203 (34%), Gaps = 23/203 (11%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               + +  +I+ +  D   VIA D ++S G  +      K+ +L    ++ G  G  AD
Sbjct: 22  FSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSHQTVL-GSTGCWAD 80

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA------DKTITL 119
             +L   ++ +++ Y +  LR+    A    +    Y R      +        ++   +
Sbjct: 81  TLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGV 140

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNS-------------AEEIARKA 165
           V +        +    A G+ G+         +     +             A  +A   
Sbjct: 141 VYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLADADKIKLTKERAVSVASDT 200

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  +YT  ++++  +   
Sbjct: 201 FISAAERDIYTGDSVLINIITND 223


>gi|45184943|ref|NP_982661.1| AAR119Wp [Ashbya gossypii ATCC 10895]
 gi|44980552|gb|AAS50485.1| AAR119Wp [Ashbya gossypii ATCC 10895]
          Length = 259

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 7/148 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +G VVIA D + + G  V   N  K+ R+      AG AG++AD   +   
Sbjct: 29  GTTIVGVKFEGGVVIAADTRSTQGPIVANKNCEKLHRIAPRIWCAG-AGTAADTEAVTWL 87

Query: 75  LEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +   LE +     R    ++        + KY  ++ A +++A  D T   + +      
Sbjct: 88  IGSNLELHSLYTGREPRVVSALQKLKQHLFKYQGHIGAYLIVAGVDPTGAHLFSVHAHGS 147

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN 156
                  ++GSG   A++   A      
Sbjct: 148 TDVGQYQSLGSGSLAAMAVLEAQWREGM 175


>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
 gi|302595721|sp|A1RTI7|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|119674013|gb|ABL88269.1| archaean proteasome, beta component. Threonine peptidase. MEROPS
           family T01A [Pyrobaculum islandicum DSM 4184]
          Length = 200

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 12/184 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D +V+ G  +      K+ ++    + A  +G  AD  +LL  L
Sbjct: 2   TTTVGIAVKEGVVLATDKRVTAGYYIAHKQGEKIWKIDDH-VAATMSGGVADLQSLLSFL 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGMGDV 127
             +  +Y  +  R     A    +   L      I +    I          +       
Sbjct: 61  TLRAREYKIEYKRPIPIRALVNYVSLILFYSRPYIYLVHSIIGGVDREEGAVLYMVDWLG 120

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                  +A GSG  YA  A         S   A ++A +++  A      +   I +  
Sbjct: 121 TVTRERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIRSVKAAIRNDPGSGEGIDVVV 180

Query: 185 LKVG 188
           +   
Sbjct: 181 ITKE 184


>gi|74184320|dbj|BAE25698.1| unnamed protein product [Mus musculus]
          Length = 273

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +AD       
Sbjct: 39  GTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADTEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              K+E +     R          + + L   +  +         D     +        
Sbjct: 98  AASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++          +   A+E+  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELMVEAIT--AGILSDLGSGGNVDAC 215

Query: 184 TLKVG 188
            +  G
Sbjct: 216 VITAG 220


>gi|328774191|gb|EGF84228.1| hypothetical protein BATDEDRAFT_15564 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 214

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 12/196 (6%)

Query: 5   GDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G K    +++  TTI+ V+    VV+A D + ++G  +      K+ ++ +       +G
Sbjct: 3   GPKLKPNEVNLGTTIMAVQFADGVVVAADSRTTMGSYIANRVTDKLTQIHERIFCC-RSG 61

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
           S+AD   + + +  +L+ +                  + +   +  ++            
Sbjct: 62  SAADTQAVADMVHYQLQVFSVTEGVLPKVETAANMFQRIVYENKDRLMAGIIVAGWDPVN 121

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADIC 173
              V +        +      GSG SY      A      + EE     + A+S+A    
Sbjct: 122 GPSVYSIPLGGSLHKRPFTIGGSGSSYIYGYCDATFKDDMTREEAIQFTKNAVSLAMSRD 181

Query: 174 VYTNHNIVLETLKVGD 189
             +   I L  +   +
Sbjct: 182 GSSGGTIRLAIITKDN 197


>gi|225192936|dbj|BAH29706.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVMFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+++ R A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMNDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TAE 213


>gi|221505718|gb|EEE31363.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
          Length = 361

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 20/201 (9%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  +      +  T++ V  +   V  GD ++S G ++      K+ +L    ++A  +G
Sbjct: 147 MERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLAT-SG 205

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--- 120
             AD  TL   L+ ++EQY +Q        A    +   L +           +  +   
Sbjct: 206 MEADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDEN 265

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAE---EIARK 164
                           +     G+G    +      +S           + E   EI + 
Sbjct: 266 GKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQISRNNQQGEKAPLTRERIVEIVKS 325

Query: 165 AMSIAADICVYTNHNIVLETL 185
           A++ A +  ++T     +  +
Sbjct: 326 AVASAGERDIFTGDQAEVVMI 346


>gi|221484304|gb|EEE22600.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
          Length = 359

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 20/201 (9%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  +      +  T++ V  +   V  GD ++S G ++      K+ +L    ++A  +G
Sbjct: 145 MERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLAT-SG 203

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--- 120
             AD  TL   L+ ++EQY +Q        A    +   L +           +  +   
Sbjct: 204 MEADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDEN 263

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAE---EIARK 164
                           +     G+G    +      +S           + E   EI + 
Sbjct: 264 GKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQISRNNQQGEKAPLTRERIVEIVKS 323

Query: 165 AMSIAADICVYTNHNIVLETL 185
           A++ A +  ++T     +  +
Sbjct: 324 AVASAGERDIFTGDQAEVVMI 344


>gi|237838257|ref|XP_002368426.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
 gi|211966090|gb|EEB01286.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
          Length = 359

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 20/201 (9%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  +      +  T++ V  +   V  GD ++S G ++      K+ +L    ++A  +G
Sbjct: 145 MERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLAT-SG 203

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--- 120
             AD  TL   L+ ++EQY +Q        A    +   L +           +  +   
Sbjct: 204 MEADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDEN 263

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAE---EIARK 164
                           +     G+G    +      +S           + E   EI + 
Sbjct: 264 GKGAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQISRNNQQGEKAPLTRERIVEIVKS 323

Query: 165 AMSIAADICVYTNHNIVLETL 185
           A++ A +  ++T     +  +
Sbjct: 324 AVASAGERDIFTGDQAEVVMI 344


>gi|9408027|emb|CAB99309.1| proteasome beta-5 subunit [Giardia intestinalis]
          Length = 261

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 12/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT +     G +++A D + + GQ V     +KV  +    I+   AG + D      
Sbjct: 82  HGTTTIAFCFRGGILLAVDSRSTQGQFVSSGVVQKVIEITPH-ILGTIAGVAGDCQFWER 140

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--------TITLVITGMG 125
            L +K   Y  +        +        L +     +                +     
Sbjct: 141 DLGRKCRLYELENGERIYASSASKLFISTLHSQSGADMSVGAMISGFDSTNHPCIYYCDS 200

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
           +       +   GSG ++A          + + E+   + +KA+  A
Sbjct: 201 EGTRIGGYLYGAGSGSTFAFGIVDTEYDFEMTEEQAIALGKKAIYHA 247


>gi|115448935|ref|NP_001048247.1| Os02g0770000 [Oryza sativa Japonica Group]
 gi|8671502|dbj|BAA96834.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|46805414|dbj|BAD16916.1| beta 1 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|113537778|dbj|BAF10161.1| Os02g0770000 [Oryza sativa Japonica Group]
 gi|125541285|gb|EAY87680.1| hypothetical protein OsI_09094 [Oryza sativa Indica Group]
 gi|125583826|gb|EAZ24757.1| hypothetical protein OsJ_08530 [Oryza sativa Japonica Group]
 gi|215737147|dbj|BAG96076.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737608|dbj|BAG96738.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765462|dbj|BAG87159.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 246

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+A D + S G  V    + K+ +L     I   +GS+AD   + + 
Sbjct: 25  GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYIC-RSGSAADTQVISDY 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L+    +          + +     
Sbjct: 84  VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 143

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG SY             S   AE+   K +S+A      +   +   T
Sbjct: 144 TILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKFVVKVVSLAIARDGASGGVVRTVT 203

Query: 185 LKVG 188
           +   
Sbjct: 204 INAD 207


>gi|47210318|emb|CAF91166.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 277

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 12/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 44  GTTIAGLIYKDGVILGADTRATDDMVVADKNCLKIHYIAPRIYCCG-AGVAADAEVTTQI 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +    E +     R  +      ++ + L   +  +  +      D T   + +      
Sbjct: 103 MASNAELHALNTGRPPLVAMVTRQLKQMLFRYQGHVGSSLIVGGTDVTGAHLYSVYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS--IAADI--CVYTNHNIVLET 184
             +   + +GSG + A+S            EE A+  M   IAA I   + +  N+ L  
Sbjct: 163 YDKLPYLTMGSGAAAAISVLEDRYKANMELEE-AKSLMRDTIAAGIFTDLGSGSNVDLCV 221

Query: 185 LK 186
           + 
Sbjct: 222 IT 223


>gi|207108495|ref|ZP_03242657.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 147

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 66/147 (44%), Positives = 96/147 (65%), Gaps = 2/147 (1%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +      +I GDGQV+LG  V+KANA K+R L    +++GFAGS+ADAF+L +  E+ LE
Sbjct: 1   MEGKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADAFSLFDMFERILE 60

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE-PENGVMAIGS 139
                L +S V+ +K+WR DKYLR LEAM+++ +     +++G GDVLE  +N + AIGS
Sbjct: 61  SKKGDLFKSVVDFSKEWRKDKYLRRLEAMMIVLNLDHIFILSGTGDVLEAEDNKIAAIGS 120

Query: 140 GGSYALSAARALMST-QNSAEEIARKA 165
           GG+YALSAARAL         ++  ++
Sbjct: 121 GGNYALSAARALDHFAHLEPRKLVEES 147


>gi|225192939|dbj|BAH29704.1| proteasome subunit, beta type 10 [Oryzias latipes]
          Length = 266

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +  + V      K+  +       G AG++AD     + 
Sbjct: 32  GTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCG-AGTAADTEKTTDL 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
           L   L  +     R+   +     +   L           ++   D T   + T      
Sbjct: 91  LSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQIGANLILGGVDCTGNHLYTVGPYGS 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +   +A+GSG   AL               A+++ + A+       + + +NI +  +
Sbjct: 151 VNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVQDAVHSGIMNDLGSGNNIDICVI 210

Query: 186 KVG 188
              
Sbjct: 211 TAE 213


>gi|118482133|gb|ABK92997.1| unknown [Populus trichocarpa]
          Length = 227

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+ T+ + 
Sbjct: 16  GTTIIGVTYNGGVVLGADSRTSTGIYVANRASDKITQLTDNVYLC-RSGSAADSQTVSDY 74

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L+    +          +       
Sbjct: 75  VRYFLHQHTIQLGQPATVKVAANLVRLLSYSNKNMLQTGMIIGGWDKYEGGKIYGVPLGG 134

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              E      GSG +Y             +   AE++  KA+S+A    
Sbjct: 135 TLLELPFTIGGSGSTYLYGFFDQAWKEGMTQEEAEQLVVKAVSLAIARD 183


>gi|332643799|gb|AEE77320.1| proteasome subunit beta type-7-A [Arabidopsis thaliana]
          Length = 267

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 16/185 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI        V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTI------DGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L + +        +   D T   + T      
Sbjct: 92  VSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 151

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
                   +GSG   A+S   A      + +E I   A SI + I   + +  N+ +  +
Sbjct: 152 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVI 211

Query: 186 KVGDE 190
             G++
Sbjct: 212 TKGNK 216


>gi|195495065|ref|XP_002095108.1| GE22205 [Drosophila yakuba]
 gi|194181209|gb|EDW94820.1| GE22205 [Drosophila yakuba]
          Length = 235

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 70/203 (34%), Gaps = 23/203 (11%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               + +  +I+ +  D   VIA D ++S G  +      K+ +L    ++ G  G  AD
Sbjct: 22  FSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVL-GSTGCWAD 80

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA------DKTITL 119
             +L   ++ +++ Y +  LR+    A    +    Y R      +        ++   +
Sbjct: 81  TLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGV 140

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNS-------------AEEIARKA 165
           V +        +    A G+ G+         +     +             A  +A   
Sbjct: 141 VYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLADADKIKLTKERAVSVASDT 200

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  +YT  ++++  +   
Sbjct: 201 FISAAERDIYTGDSVLINIITKD 223


>gi|158293754|ref|XP_315096.4| AGAP004991-PA [Anopheles gambiae str. PEST]
 gi|157016597|gb|EAA10482.4| AGAP004991-PA [Anopheles gambiae str. PEST]
          Length = 231

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           + Y  + +  +++ +  +   VI  D ++S G ++      K+ RL    ++A   G   
Sbjct: 19  QFYPYESNGGSVVAIAGEDFAVIGADTRLSSGYSIHTRTQNKLFRLSDKTVLA-STGCWC 77

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA-----DKTITL 119
           D   L   ++ +++ Y +Q  ++    A    +    Y R      +       D+    
Sbjct: 78  DTLALTSLVKVRMQMYKDQHQKNMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDQDGKG 137

Query: 120 VITGMGDVLEPEN-GVMAIGSGGSYALSAAR--------ALMSTQ----NSAEEIARKAM 166
           V+     +   E     A GS G                     +      A  I +   
Sbjct: 138 VVYSYDPIGHCEMTTYRAGGSAGPLLQPVLDNQIGQKNMLNADPEPVKMEKAISIIKDTF 197

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             A +  +YT  ++++  +   
Sbjct: 198 ISATERDIYTGDSVIINIITKD 219


>gi|296202288|ref|XP_002748328.1| PREDICTED: proteasome subunit beta type-6-like [Callithrix jacchus]
          Length = 239

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 229

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 62/202 (30%), Gaps = 20/202 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +   IL V      V+A D ++S G  +   +  K  +L    ++A  +G  
Sbjct: 17  HRFEPYAFNGGNILAVAGGDFAVVASDTRLSQGFMIHTRDHPKAVQLTANTVLAQ-SGFE 75

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTI 117
            D+ TL + ++ ++  Y +   ++    A    + K L                  ++  
Sbjct: 76  GDSLTLKKHVQMRIGMYEHNHGKTPSTSAIAAMISKMLYYKRFFPYYVYNIVAGLDNEGK 135

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS----------AEEIARKAM 166
             V +             A G+            +     S          A ++     
Sbjct: 136 GCVYSYDPVGSYEREQYRAAGAANELLQPLLDNQIGFKNMSEAGPPLSKERAVQLCIDCF 195

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  + T   ++++ +   
Sbjct: 196 ISAAERDITTGDCVLIQVIDKD 217


>gi|332007186|gb|AED94569.1| proteasome subunit beta type-7-B [Arabidopsis thaliana]
          Length = 268

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 68/187 (36%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI        V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 39  GTTI------DGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L  +  Q  R S  +     + K+L + +        +   D T   + T      
Sbjct: 92  VSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGS 151

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                   +GSG   A+S   A      + +E   +  +A  I + I   + +  N+ + 
Sbjct: 152 TDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDIC 209

Query: 184 TLKVGDE 190
            +  G +
Sbjct: 210 VITKGHK 216


>gi|224047782|ref|XP_002190134.1| PREDICTED: putative proteasome subunit beta type 1 [Taeniopygia
           guttata]
          Length = 233

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 67/195 (34%), Gaps = 21/195 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H  T+L +  +   ++A D ++S G ++   ++ K  +L +  +I G  G   D  TL +
Sbjct: 28  HDWTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVI-GCTGFHGDCLTLTK 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------ITGMG 125
            +E +L+ Y +   ++    A    +   L +           I  +         +   
Sbjct: 87  IIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDP 146

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAMSIAADIC 173
                 +   A GS  +         +  +N             A ++ +     AA+  
Sbjct: 147 VGSYERDNFKAGGSASAMLQPLLDNQIGFKNMQNVEHVPLTLEKALQLVKDVFISAAERD 206

Query: 174 VYTNHNIVLETLKVG 188
           VYT   + +  +   
Sbjct: 207 VYTGDALKICIVTKD 221


>gi|302563527|ref|NP_001180957.1| proteasome subunit beta type-10 [Macaca mulatta]
          Length = 273

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +ADA      
Sbjct: 39  GTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADAEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +  K+E +     R +        + + L      +         D T   + +      
Sbjct: 98  VASKMELHALSTGREARVATVTRVLCQTLFRYRGHVGASLIVGGVDLTGPQLYSVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQGEALAVLEDRFQPNMTLEAAQGLLVEAIT--AGILGDLGSGGNVDAC 215

Query: 184 TLKV 187
            +  
Sbjct: 216 VITK 219


>gi|307611968|ref|NP_001182643.1| proteasome (prosome, macropain) subunit, beta type, 6 [Macaca
           mulatta]
          Length = 239

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|329764912|ref|ZP_08256501.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329138581|gb|EGG42828.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 195

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 10/187 (5%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + M   T + +     +V+A + +++ G  ++    +K   +    + A  AG  AD   
Sbjct: 1   MYMPGATAVGITFQDGIVLASEKRIAFGNFLVSKTTKKTFPITP-KVGATCAGLVADMQI 59

Query: 71  LLERLE--KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----LIADKTITLVITGM 124
           L  ++    K+ +   +       +AK      Y R    ++    +       ++ T  
Sbjct: 60  LTLQIAALAKIRKMELKRDVPPNTIAKMMSNMMYERRYFPLLTQVIVGGIIDKPILFTLD 119

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIV 181
                  +   A+G+G   AL           +   A ++A++A+  AA     +   + 
Sbjct: 120 PLGSVLPDEYAAVGTGAEMALGVLDPQFKPNMTQEEAIDLAKRAVRSAALRDSASGDGLD 179

Query: 182 LETLKVG 188
           +  +   
Sbjct: 180 VLVITKD 186


>gi|194701304|gb|ACF84736.1| unknown [Zea mays]
 gi|194701404|gb|ACF84786.1| unknown [Zea mays]
          Length = 244

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 23  GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADTQVISDY 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L+    +          + +     
Sbjct: 82  VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 141

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG SY  +          S   AE+   K +S+A      +   +   T
Sbjct: 142 TILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDGASGGVVRTVT 201

Query: 185 LKVG 188
           +   
Sbjct: 202 INAD 205


>gi|123450195|ref|XP_001313725.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121895618|gb|EAY00796.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 275

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 14/186 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI     DG VV+  D + + G  V   +  K+  +     + G AG +AD   +   
Sbjct: 31  GTTIAAAIFDGGVVLGADTRATAGPIVAVKDEMKLHYISDNIWVCG-AGIAADNDNINAV 89

Query: 75  LEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  KL  +                   R+ +Y+  ++A +++   D     V        
Sbjct: 90  ISAKLRLFQMNTGLQPRVDQCTNILASRLFQYMGYIQAALIVGGIDFQGPQVYQVAPHGS 149

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
             +   +A GSG   A+S        +       E+   A+   A I   + +  ++ L 
Sbjct: 150 FSKQPFIAQGSGSLAAISVLENRWHNKMNEHDCMEMVADAIY--AGITNDLGSGSHVNLC 207

Query: 184 TLKVGD 189
            +K  +
Sbjct: 208 VIKREN 213


>gi|85014261|ref|XP_955626.1| proteasome subunit beta [Encephalitozoon cuniculi GB-M1]
 gi|74664155|sp|Q8SQN7|PSB7_ENCCU RecName: Full=Probable proteasome subunit beta type-7; AltName:
           Full=26S proteasome beta-type subunit PUP1; AltName:
           Full=Multicatalytic endopeptidase complex subunit PUP1;
           Flags: Precursor
 gi|19171320|emb|CAD27045.1| PROTEASOME BETA-TYPE SUBUNIT (MACROPAIN SUBUNIT PUP1)
           [Encephalitozoon cuniculi GB-M1]
          Length = 227

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 77/182 (42%), Gaps = 13/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ ++    V++A D + + G  V   N  K+ ++    +  G AG++ADA  +   
Sbjct: 6   GTTIVGMKYKTGVILAADTRSTQGPVVSDKNCVKIHQITDKIMCCG-AGTAADASRVARM 64

Query: 75  LEKKLEQYPNQLLR----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
             ++L  + N+ LR    S         + KY   + A +++   D     +        
Sbjct: 65  ASRELRLFQNKYLRLPLVSHFRKVCTQHLHKYGGGIGAALIVGGIDSEGCHLYEIHPHGS 124

Query: 129 EPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADI--CVYTNHNIVLET 184
           E     +++GSG   A++   +      ++ A ++A  A+   A I   +Y+  NI +  
Sbjct: 125 ENSALFVSLGSGSLGAIATLESRYRAMDKDEAIDLACDAVK--AGILNDLYSGSNIDVCV 182

Query: 185 LK 186
           + 
Sbjct: 183 ID 184


>gi|71663121|ref|XP_818557.1| proteasome beta-1 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70883816|gb|EAN96706.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
          Length = 284

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 58/169 (34%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V   G VV+A D + S G  V+   + K+ +L +  I    +GS+AD   L E+
Sbjct: 54  GTTIMAVAFKGGVVLAADSRTSTGTYVVNRASNKLTKLAE-KIYCCRSGSAADTQALAEQ 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
               LE Y     +            K     +  I                V +     
Sbjct: 113 TANYLESYETDTSKPVNVTTAANIFKKLCYMNKWNISAGIIVAGYDPLNGGSVYSIPSGG 172

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADIC 173
              +      GSG  +  S   A   T  S EE     ++A++ A    
Sbjct: 173 SCVKLDYALGGSGSIFLYSFFDANYKTGMSKEECVCFCQRAVAHAYSRD 221


>gi|325968211|ref|YP_004244403.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
 gi|323707414|gb|ADY00901.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
          Length = 219

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 65/200 (32%), Gaps = 12/200 (6%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M+   +++    M  TT + +  +  VV+A D +V+ G  +              +I A 
Sbjct: 4   MISNNNENLTRLMTGTTTVGIVINDGVVLATDRRVTAGYYIAHRKKGVKIWKIDNHIAAT 63

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   +L+ L     QY     +     A        + +    + +    +   
Sbjct: 64  MSGGVADLQKVLDSLTATAIQYKVDTGKPISIRALANYASLVVFSSRPFVYLVHMILGGW 123

Query: 121 ITGMGDVLEP---------ENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
               G V+           E   MA GSG   A            S EE   +A +A+  
Sbjct: 124 DPDEGPVIYMLDFFGTLTKETEFMATGSGSPTAFGVLEDGYKRDMSIEEAVRLAVRAVRS 183

Query: 169 AADICVYTNHNIVLETLKVG 188
           A      +   I + T+   
Sbjct: 184 AIYHDPGSGEGIDVVTITKE 203


>gi|332227558|ref|XP_003262958.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta
           type-10-like [Nomascus leucogenys]
          Length = 273

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +ADA      
Sbjct: 39  GTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFITPKIYCCG-AGVAADAEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +  K+E +     R          + + L      +         D T   +        
Sbjct: 98  VASKMELHALSTGREPRVATVTRILRQTLFRYRGHVGASLIVGGVDXTGPQLYGVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAIT--AGILGDLGSGGNVDAC 215

Query: 184 TLKV 187
            +  
Sbjct: 216 VITK 219


>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
 gi|302595707|sp|A1RSJ8|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
          Length = 203

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + ++    VV+A + +VS G   + +  +KV  +     IA  AG  AD  TL   
Sbjct: 8   GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIA-SAGIIADMQTLARI 66

Query: 75  LE-----KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
           L+      +LE      +R+  +L       + L    A +L+   D+    +I      
Sbjct: 67  LKLNVMSYELEVRKKPTVRAMAKLLSIIMFSRRLLPFYAEVLVGGVDEEGPHLIVMDPLG 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E+   A+G+G   A+S   A      S   A+++A +A+  A +    +   I L  
Sbjct: 127 SLIEDNYAALGTGAKLAVSLLDATYRPDISLQEAKKLAVQAIKAAIERDPVSGGGIDLAV 186

Query: 185 LK 186
           + 
Sbjct: 187 VD 188


>gi|71043724|ref|NP_001020808.1| proteasome subunit beta type-10 [Rattus norvegicus]
 gi|123782094|sp|Q4KM35|PSB10_RAT RecName: Full=Proteasome subunit beta type-10; AltName: Full=Low
           molecular mass protein 10; AltName: Full=Macropain
           subunit MECl-1; AltName: Full=Multicatalytic
           endopeptidase complex subunit MECl-1; AltName:
           Full=Proteasome MECl-1; AltName: Full=Proteasome subunit
           beta-2i; Flags: Precursor
 gi|68534299|gb|AAH98835.1| Proteasome (prosome, macropain) subunit, beta type 10 [Rattus
           norvegicus]
 gi|149038062|gb|EDL92422.1| proteasome (prosome, macropain) subunit, beta type 10, isoform
           CRA_b [Rattus norvegicus]
          Length = 273

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 59/185 (31%), Gaps = 14/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +AD       
Sbjct: 39  GTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADTEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              K+E +     R          + + L   +  +         D     + +      
Sbjct: 98  AASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLNGPQLYSVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++          +   A+E+  +A++  A I   + +  ++   
Sbjct: 158 YSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQELLVEAIT--AGILGDLGSGGSVDAC 215

Query: 184 TLKVG 188
            +  G
Sbjct: 216 VITAG 220


>gi|332257645|ref|XP_003277915.1| PREDICTED: proteasome subunit beta type-6-like isoform 1 [Nomascus
           leucogenys]
 gi|332257647|ref|XP_003277916.1| PREDICTED: proteasome subunit beta type-6-like isoform 2 [Nomascus
           leucogenys]
 gi|332257649|ref|XP_003277917.1| PREDICTED: proteasome subunit beta type-6-like isoform 3 [Nomascus
           leucogenys]
          Length = 239

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|296231377|ref|XP_002761135.1| PREDICTED: proteasome subunit beta type-10-like [Callithrix
           jacchus]
          Length = 273

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +AD   +   
Sbjct: 39  GTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADTEMITRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +  K+E +     R          + + L   +  +         D T   +        
Sbjct: 98  VGSKMELHALSTGREPRVPTVTRILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +  N+   
Sbjct: 158 YSRMLFTALGSGQDAALAVLEDRFQPDMTLEAAQGLLVEAIT--AGILGDLGSGGNVDAC 215

Query: 184 TLKV 187
            +  
Sbjct: 216 VITK 219


>gi|297699722|ref|XP_002826924.1| PREDICTED: proteasome subunit beta type-6-like [Pongo abelii]
          Length = 239

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|322816363|gb|EFZ24690.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
          Length = 284

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 58/169 (34%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V   G VV+A D + S G  V+   + K+ +L +  I    +GS+AD   L E+
Sbjct: 54  GTTIMAVAFKGGVVLAADSRTSTGTYVVNRASNKLTKLAE-KIYCCRSGSAADTQALAEQ 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
               LE Y     +            K     +  I                V +     
Sbjct: 113 TANYLESYEIDTSKPVNVTTAANIFKKLCYMNKWNISAGIIVAGYDPLNGGSVYSIPSGG 172

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADIC 173
              +      GSG  +  S   A   T  S EE     ++A++ A    
Sbjct: 173 SCVKLDYALGGSGSIFLYSFFDANYKTGMSKEECVCFCQRAVAHAYSRD 221


>gi|74204932|dbj|BAE20959.1| unnamed protein product [Mus musculus]
          Length = 245

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 62/182 (34%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +G VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 33  GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADA 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 92  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 151

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + +E  +    A+++A +    +   I L  
Sbjct: 152 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 211

Query: 185 LK 186
           ++
Sbjct: 212 IQ 213


>gi|18859275|ref|NP_571466.1| proteasome subunit beta type-9 [Danio rerio]
 gi|5833461|gb|AAD53519.1|AF155579_1 proteasome subunit beta 9A [Danio rerio]
 gi|29561856|emb|CAD87789.1| proteasome (prosome, macropain) subunit, beta type, 9a [Danio
           rerio]
 gi|50416819|gb|AAH78384.1| Proteasome (prosome, macropain) subunit, beta type, 9a [Danio
           rerio]
 gi|94732367|emb|CAK04958.1| proteasome (prosome, macropain) subunit, beta type, 9a [Danio
           rerio]
          Length = 218

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D +VS G++V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 19  GTTIIAVTFDGGVVIGSDSRVSAGESVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++    +  +          KY   L A +++A  DK     +      L
Sbjct: 78  VNYQLDVHSIEVEDDPLVCSAATLVKNISYKYKEELSAHLIVAGWDKKGGGQVYATLSGL 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
             +      GSG  Y      A      +  E       A+++A      +     + T+
Sbjct: 138 LTKQPFAIGGSGSFYINGFVDAEYKKNMTKRECQEFVVNALTLAMGRDGSSGGVAYVVTI 197

Query: 186 KVG 188
              
Sbjct: 198 DKD 200


>gi|195629028|gb|ACG36246.1| proteasome subunit beta type 6 precursor [Zea mays]
          Length = 243

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 22  GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADTQVISDY 80

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L+    +          + +     
Sbjct: 81  IRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 140

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG SY  +          S   AE+   K +S+A      +   +   T
Sbjct: 141 TILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDGASGGVVRTVT 200

Query: 185 LKVG 188
           +   
Sbjct: 201 INAD 204


>gi|242094606|ref|XP_002437793.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
 gi|241916016|gb|EER89160.1| hypothetical protein SORBIDRAFT_10g002700 [Sorghum bicolor]
          Length = 245

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG V++  D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 24  GTTIVGVCYDGGVILGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADTQVISDY 82

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L+    +          + +     
Sbjct: 83  VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 142

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG SY  +          S   AE+   K +S+A      +   +   T
Sbjct: 143 TILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDGASGGVVRTVT 202

Query: 185 LKVG 188
           +   
Sbjct: 203 INAD 206


>gi|149724885|ref|XP_001504802.1| PREDICTED: similar to Proteasome subunit beta type-6 precursor
           (Proteasome delta chain) (Macropain delta chain)
           (Multicatalytic endopeptidase complex delta chain)
           (Proteasome subunit Y) [Equus caballus]
          Length = 239

 Score =  101 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIVAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 220

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 57/169 (33%), Gaps = 11/169 (6%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
              VV+A D +V+ G  V     +KV  L     I   AG  ADA TL++ ++  +  Y 
Sbjct: 22  KDAVVVATDTRVTSGFFVAHRRGKKVFPLAPHVAI-TIAGRVADAQTLIDLIKANINYYQ 80

Query: 84  NQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPENGVMA 136
               +     A        + +       A       D     +          E  ++A
Sbjct: 81  IMRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGPHLYNLDPFGSVTEEKLIA 140

Query: 137 IGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
            GSG   A               SA E+A +A+S A      +  ++ +
Sbjct: 141 TGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDV 189


>gi|77735687|ref|NP_001029541.1| proteasome subunit beta type-6 precursor [Bos taurus]
 gi|108860907|sp|Q3MHN0|PSB6_BOVIN RecName: Full=Proteasome subunit beta type-6; Flags: Precursor
 gi|75948245|gb|AAI05177.1| Proteasome (prosome, macropain) subunit, beta type, 6 [Bos taurus]
 gi|296476732|gb|DAA18847.1| proteasome subunit beta type-6 precursor [Bos taurus]
          Length = 239

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|239788842|dbj|BAH71082.1| ACYPI000065 [Acyrthosiphon pisum]
          Length = 216

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 50/147 (34%), Gaps = 8/147 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G +V+A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 71  HGTTTLGFLYQGGIVLAVDSRATGGQYIGSQCMKKIVEINDF-MLGTLAGGAADCVYWDR 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGD 126
            L K+   +  +        A    M   +   +        M+   DK    +     D
Sbjct: 130 VLSKQCRLHELRNKERISVTAASKIMSNMIYYYKGYGLSIGMMLAGYDKNGPSLFYIDND 189

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS 153
                  V ++GSG  YA     +   
Sbjct: 190 GSRTPGKVFSVGSGSIYAFGVLDSGYK 216


>gi|125977126|ref|XP_001352596.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
 gi|195168113|ref|XP_002024876.1| GL17976 [Drosophila persimilis]
 gi|54641344|gb|EAL30094.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
 gi|194108306|gb|EDW30349.1| GL17976 [Drosophila persimilis]
          Length = 235

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 65/203 (32%), Gaps = 23/203 (11%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               + +  +I+ +  +  VVIA D ++S G  +      K+  L    ++A   G   D
Sbjct: 22  FSPYESNGGSIVAIAGEDFVVIAADTRLSSGYNIHTRKQSKLFPLSNQTVLA-STGCWCD 80

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------- 120
             +L   ++ +++ Y +  L++    A    +   + N           +  +       
Sbjct: 81  TLSLTGLMKLRMQNYEHTHLKTMTTDAVAQMLSIIMYNRRFFPYYVSNILAGIDKDGKGV 140

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARA--LMS----TQNSAEEIARK--------A 165
             +             A G+ G+                     A E+ ++         
Sbjct: 141 VFSYDPIGHCERATYRAGGTAGALLQPVLDNQIGYKNMNLHGEDAPEVTKERAVAVASDT 200

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              AA+  +YT  ++++  +   
Sbjct: 201 FISAAERDIYTGDSVLINIITKD 223


>gi|302348749|ref|YP_003816387.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
 gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
          Length = 207

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 12/190 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            A ++   T + V+    VV+A D +++ G  VM  NA+KV  +     IA  +G  AD 
Sbjct: 2   SAYEIEQGTAVGVKAKDGVVLATDKRMAYGSFVMSRNAKKVFLINNRAAIA-MSGLYADV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLV 120
             +L  L  + + Y     R+    A    +   L + + +  I +             +
Sbjct: 61  GAILRYLTAESKYYELTEERTMSLYAISKLLSGILYSYKMLPFIIEALVGGIDRDGQPKI 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
            T        E+  MA+GSG + AL       +   S   AE++A  A+ I+ +    T 
Sbjct: 121 YTLDSLGSVSEDKYMAVGSGATTALGFLEDQYNDALSLDQAEQVAVGALRISMERDASTG 180

Query: 178 HNIVLETLKV 187
             I + ++  
Sbjct: 181 DGIDVISIST 190


>gi|291405211|ref|XP_002718873.1| PREDICTED: proteasome beta 6 subunit [Oryctolagus cuniculus]
          Length = 239

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|149699704|ref|XP_001498526.1| PREDICTED: similar to proteasome beta 10 subunit proprotein [Equus
           caballus]
          Length = 273

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA      
Sbjct: 39  GTTIAGIVFRDGVILGADTRATNDSVVADKNCEKIHFIAPKIYCCG-AGVAADAEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
               +E +     R          + + L   +  +         D T   +        
Sbjct: 98  AASNMELHALSTGREPRVATVTRMLRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFAALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAIT--AGILGDLGSGGNVDAC 215

Query: 184 TLKV 187
            +  
Sbjct: 216 VITR 219


>gi|221117643|ref|XP_002165958.1| PREDICTED: similar to 20S proteasome beta subunit [Hydra
           magnipapillata]
          Length = 226

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 62/205 (30%), Gaps = 21/205 (10%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M            ++L +  +   VIA D ++S G  +   N  K  +L    I+ G  G
Sbjct: 11  MKHDFSPYSSQGGSLLAIAGEDFAVIASDTRLSEGFLIHSRNIPKTYQLTDTTIL-GSCG 69

Query: 64  SSADAFTLLERLEKKL--EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DK 115
              D  TL + ++ +L   ++ +    S   +A+      Y +                 
Sbjct: 70  FHGDVLTLTKNIKTRLVMYEHEHFKTMSCSSIAQMLSTTLYYKRFFPYYTYNIIAGLDSD 129

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAAR-------ALMSTQ--NSAE---EIAR 163
               + +             A GS  +   S              +    S E   E+ +
Sbjct: 130 GKGAIYSFDPVGSYERETYRAGGSCSAMLQSFLDNQIGQKNLAKKSDIPLSLERCVELIK 189

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
                AA+  + T   +++  +   
Sbjct: 190 DVFISAAERDIETGDGVLISIITKE 214


>gi|36059|emb|CAA44603.1| RING12 [Homo sapiens]
 gi|123296527|emb|CAM26264.1| proteasome (prosome, macropain) subunit beta type 9 (large
           multifunctional protease 2) [Homo sapiens]
 gi|168983775|emb|CAQ08907.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985349|emb|CAQ08497.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|228223|prf||1718344A RING12 gene
          Length = 219

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHEHIYCA-LSGSAADAQAVADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G    +
Sbjct: 79  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG ++      A      S EE  R    A+++A      +   I L T+
Sbjct: 139 LTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|52547780|gb|AAU81925.1| low molecular mass protein 7 [Marmota monax]
          Length = 156

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 11/157 (7%)

Query: 27  VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
           V++A D + S G  +      KV  +    ++   +G +AD       L K+   Y  + 
Sbjct: 1   VIVAVDSRASAGSYIATLRMNKVIEINPY-LLGTMSGCAADCQYWERLLAKECRLYYLRN 59

Query: 87  LRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPENGVMAIGS 139
                  A    +   +     M L         DK    +     +       + + GS
Sbjct: 60  GERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYVDHNGTRLSGCMFSTGS 119

Query: 140 GGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
           G SYA     +      S EE   + R+A+  A    
Sbjct: 120 GNSYAYGVMDSGYLPNLSPEEAYDLGRRAIVHATHRD 156


>gi|225714818|gb|ACO13255.1| Proteasome subunit beta type-6 precursor [Esox lucius]
          Length = 231

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +          GS+AD   + + 
Sbjct: 31  GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPIHDHIFCC-RPGSAADTQAVADA 89

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L    +         +        ++               V T     
Sbjct: 90  VTYQLGFHSIELDEPPLVQTAANLFKQMCYRYREELMAGIIVAGWDKRKGGQVYTVPMGG 149

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
           +     V   GSG SY      +      + EE      +A+++A +  
Sbjct: 150 MIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALTLAMERD 198


>gi|242079721|ref|XP_002444629.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
 gi|241940979|gb|EES14124.1| hypothetical protein SORBIDRAFT_07g025030 [Sorghum bicolor]
          Length = 245

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG V++  D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 24  GTTIVGVCYDGGVILGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADTQVISDY 82

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   L Q+  QL + +                   L+    +          + +     
Sbjct: 83  VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFSVPLGG 142

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG SY  +          S   AE+   K +S+A      +   +   T
Sbjct: 143 TILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMARDGASGGVVRTVT 202

Query: 185 LKVG 188
           +   
Sbjct: 203 INAD 206


>gi|126309277|ref|XP_001370876.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 6 [Monodelphis domestica]
          Length = 246

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 41  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 99

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 100 VTYQLSFHSIELNEPPLVHTAANLFKEMCYRYREDLMAGIIVAGWDPREGGQVYSVPMGG 159

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + ++  +    A+++A D    +   I L  
Sbjct: 160 MMVRQPFSIGGSGSSYIYGYVDASYREGMNEKQCLQFTANALALAMDRDGSSGGVIRLAA 219

Query: 185 LKVG 188
           +   
Sbjct: 220 ITEK 223


>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
           aggregans DSM 11486]
 gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
           aggregans DSM 11486]
          Length = 206

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 12/184 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D + + G  V     RK+  +         +G  ADA  L+E  
Sbjct: 8   TTTVGLVAGEYVVLAADKRATAGPMVYHKRVRKIMEITPY-AAMTISGLVADAQFLVENA 66

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--------ILIADKTITLVITGMGDV 127
           +   + Y  ++ +     A   R+   L              +   D     +       
Sbjct: 67  KYIAKDYELKMGKRISIDALASRISLILSAYLRFSPFIVQLLLGGVDHEGPKLYYMDLYG 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                  M+ GSG   A            +   A+E+A KA+S A     +T   + +  
Sbjct: 127 SVSRERFMSTGSGSPVAFGVLEQGYREGLTLEEAKELAFKAVSSAIMRDSFTGEGVDIVV 186

Query: 185 LKVG 188
           +   
Sbjct: 187 IGPE 190


>gi|225714540|gb|ACO13116.1| Proteasome subunit beta type-7 precursor [Lepeophtheirus salmonis]
 gi|290462259|gb|ADD24177.1| Proteasome subunit beta type-7 [Lepeophtheirus salmonis]
 gi|290562549|gb|ADD38670.1| Proteasome subunit beta type-7 [Lepeophtheirus salmonis]
          Length = 272

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 75/196 (38%), Gaps = 14/196 (7%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G K +      TTI  +     +V   D + + G  +      K+  L    +  G AG 
Sbjct: 29  GYKSFKTTKTGTTICALIYKDGIVFGADNRATAGNIIANKFTLKIHELAPNIVACG-AGV 87

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIA--DKTIT 118
           SAD   + E L  +L+ +  +  R S  +  +     R+ +Y  ++++ +++   D +  
Sbjct: 88  SADCDKVTELLASQLKLHRLETGRQSRVVTAERILTQRLFQYQGHVQSYLILGGVDVSGR 147

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--C 173
            +               A GSG   A++   +      +   A+E+ + A+   A I   
Sbjct: 148 YIYDISAHGCASPKLYAATGSGMLGAMAELESRYKVNMTEEEAKELVKDAIL--AGIFND 205

Query: 174 VYTNHNIVLETLKVGD 189
             +  N+ +   ++ D
Sbjct: 206 NASGSNVDIAVTRISD 221


>gi|84998292|ref|XP_953867.1| proteasome subunit beta 7 [Theileria annulata]
 gi|65304864|emb|CAI73189.1| proteasome subunit beta 7, putative [Theileria annulata]
          Length = 271

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+A D + + G  V   N  K+ ++      AG AG +AD       
Sbjct: 40  GTTICGVMGRDSVVLAADTRATQGIIVADKNCSKLHKISDNIYCAG-AGVAADLEHTTLW 98

Query: 75  LEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           L   +E +     ++         L  +    +  +    ++   D T   + +      
Sbjct: 99  LANNIELHRLNTKKAPRVQMCISMLVHELFKYQGYKQCALILGGFDYTGPHLFSVSPHGS 158

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
                   +GSG   A++          S   A E+A KA+S      + +  N+ +  +
Sbjct: 159 SDSLPFCTMGSGSLNAMTVLEQNYFDGMSVEEATELAVKAISAGITNDLGSGGNVDVVVM 218

Query: 186 KVG 188
              
Sbjct: 219 DKN 221


>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
          Length = 239

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 77/201 (38%), Gaps = 20/201 (9%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            D+      ++ T+L +   G V++AGD ++S G  ++  +A K+ +L    ++A  AG 
Sbjct: 26  SDQWSPYHDNSGTVLAIGIPGAVLVAGDTRLSNGYNILTRDATKLSQLTDKCVLAT-AGQ 84

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
            AD   L + L+++L+ Y  Q    +        + + L +               D+  
Sbjct: 85  YADFIALRKFLQQRLQLYEFQNEVQASTQTVAHLLSRELYSRRFFPYYTFNLLAGLDENN 144

Query: 118 TLVITGMGDV-LEPENGVMAIGSGGSYALSAARALMS-----------TQNSAEEIARKA 165
             V+ G   +    +      GSG    ++     +            TQ    ++    
Sbjct: 145 HGVVYGYDAIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNKINKTFPQTQQEILDLILDC 204

Query: 166 MSIAADICVYTNHNIVLETLK 186
            S AA+  ++T  N+ +  + 
Sbjct: 205 FSCAAERDIHTGDNVEILIIT 225


>gi|268570046|ref|XP_002640679.1| C. briggsae CBR-PBS-5 protein [Caenorhabditis briggsae]
 gi|187023925|emb|CAP36972.1| CBR-PBS-5 protein [Caenorhabditis briggsae AF16]
          Length = 284

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 64/200 (32%), Gaps = 19/200 (9%)

Query: 9   YAVKMH-ATTILTVRK-------DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
            +++    TT L            G +++A D + S G+ +   +  K+  +G   + A 
Sbjct: 57  KSMQFRKGTTTLAFVYEPATPNDKGGIIVAVDSRASSGEYISSKSVMKILDIGDRMV-AT 115

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIA 113
            AG +AD       + K    Y  +   S    A        L            M+   
Sbjct: 116 MAGGAADCQFWTRIVAKYCTLYELREKNSITVSAASKYFANVLYGYRGQGLSVGSMVAGY 175

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
           DK    +     +    +  V ++GSG   A          + +   A ++  +A+  A 
Sbjct: 176 DKKGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKPKMTDEEARKLGLRAIMHAT 235

Query: 171 DICVYTNHNIVLETLKVGDE 190
                +     L  +   ++
Sbjct: 236 YRDSGSGGVCNLCHITPTEK 255


>gi|71666388|ref|XP_820153.1| proteasome beta-1 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70885487|gb|EAN98302.1| proteasome beta-1 subunit, putative [Trypanosoma cruzi]
          Length = 284

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 58/169 (34%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V   G VV+A D + S G  V+   + K+ +L +  I    +GS+AD   L E+
Sbjct: 54  GTTIMAVSFKGGVVLAADSRTSTGTYVVNRASNKLTKLSE-KIYCCRSGSAADTQALAEQ 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
               LE Y     +            K     +  I                V +     
Sbjct: 113 TANYLESYEIDTSKPVNVTTAANIFKKLCYMNKWNISAGIIVAGYDPLNGGSVYSIPSGG 172

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADIC 173
              +      GSG  +  S   A   T  S EE     ++A++ A    
Sbjct: 173 SCVKLDYALGGSGSIFLYSFFDANYKTGMSKEECVCFCQRAVAHAYSRD 221


>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
          Length = 210

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 12/186 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +     VV+A + + ++G  +    A+K+  +     +   AG   DA  L+ 
Sbjct: 9   KGTTTIGLICGESVVLASEKRATMGSFIASKTAKKIYLVDDRIAMTT-AGIVGDAQALVR 67

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITLVITGMG- 125
            +  +L+ Y  +             +         Y   ++ +I   D+    + T    
Sbjct: 68  IMTVELQLYKIRRNEPMTVKGISTLLSNVMNGQRYYPYIVQLLIGGIDRDGAHLYTIDPF 127

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                E+ + A GSG   A        +   S E+   +A +A+  A      +   I +
Sbjct: 128 GGNTEESEIAATGSGSPIAYGVLENKYTKDISLEKGTALAIQALYSAIKRDSASGEAIEV 187

Query: 183 ETLKVG 188
            T+   
Sbjct: 188 VTITKD 193


>gi|318037293|ref|NP_001187911.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
 gi|308324307|gb|ADO29288.1| proteasome subunit beta type-9-a like protein [Ictalurus punctatus]
          Length = 214

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 10/169 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +G V+I  D + S+G + + + A          I    AGS ADA  +   
Sbjct: 13  GTTIVAVKYNGGVIIGSDSRASVGGSYVSSKAINKLIQVHDRIFCCIAGSLADAQHVTRV 72

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTI---TLVITGMGDV 127
            + +L  +  Q+    +  A    + +   +      A  + A         V T     
Sbjct: 73  AKFQLSFHSIQMGSPPLVKAAATVLKELCYSNREDLEAGFITAGWDKKKGPQVYTVSMGG 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
           +         GSG +Y      A      S EE     + A+++A    
Sbjct: 133 MLISQPFTIGGSGSTYMYGYMDAKYKPDMSREECVQFVKNALALAIGRD 181


>gi|77735723|ref|NP_001029560.1| proteasome subunit beta type-9 precursor [Bos taurus]
 gi|108860909|sp|Q3SZC2|PSB9_BOVIN RecName: Full=Proteasome subunit beta type-9; AltName:
           Full=Proteasome subunit beta-1i; Flags: Precursor
 gi|63169163|gb|AAY34699.1| proteosome subunit beta type 9 [Bos taurus]
 gi|74267808|gb|AAI02964.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Bos taurus]
 gi|296474568|gb|DAA16683.1| proteasome subunit beta type-9 precursor [Bos taurus]
          Length = 219

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 10/181 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCA-LSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G    +
Sbjct: 79  AAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGTMSGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE  R    A+++A      +   I L T+
Sbjct: 139 LIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRDGSSGGVIYLATI 198

Query: 186 K 186
            
Sbjct: 199 T 199


>gi|325118907|emb|CBZ54459.1| Proteasome subunit beta type-7, related [Neospora caninum
           Liverpool]
          Length = 242

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 73/187 (39%), Gaps = 13/187 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V   G VV+  D + S G  V+   ARK+ R+ +   +   +GS+AD   + + 
Sbjct: 42  GTTIVAVSFQGGVVLGADTRTSAGSYVVNRAARKISRVHERMCVC-RSGSAADTQAVTQI 100

Query: 75  LEKKLEQYPNQLLR--SSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMG 125
           ++  ++QY  +L +       A          ++   L A +++A         +     
Sbjct: 101 VKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHKDALTAGLIVAGYDKVKGGQIYAIPL 160

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                     A GSG ++  +   A      +   A E+ +K+++ A      +   I +
Sbjct: 161 GGALMPMNYTAGGSGSAFISAFMDANFKDNMTQQEAVELVKKSVAYAISRDGSSGGMIRI 220

Query: 183 ETLKVGD 189
             +   D
Sbjct: 221 VVITKDD 227


>gi|161528202|ref|YP_001582028.1| proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
 gi|302595718|sp|A9A4A1|PSB1_NITMS RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|160339503|gb|ABX12590.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
          Length = 198

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 68/188 (36%), Gaps = 10/188 (5%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++ M   T + +  DG VV A + +++ G  ++    +K   +    + A  AG  AD  
Sbjct: 2   SMYMPGATAVGITFDGGVVFASEKRIAFGNFLVSKTTKKTFPITP-KVGATCAGLVADMQ 60

Query: 70  TLLERLE--KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----LIADKTITLVITG 123
            L  ++    K+ +   +       +AK      Y R    ++    +       ++ T 
Sbjct: 61  ILSLQIAALAKIRKMELKRDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGVVDKPIMYTL 120

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
                   +   A+G+G   AL           +   A ++A++A+  A+     +   +
Sbjct: 121 DPLGSVLPDEYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGDGV 180

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 181 DVLVITKD 188


>gi|58265056|ref|XP_569684.1| proteasome subunit, beta type, 7 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57225916|gb|AAW42377.1| proteasome subunit, beta type, 7, putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 303

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 17/190 (8%)

Query: 15  ATTILTVRKDGV-------VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
            TTI+ V   G        V +  D + + G  V   N  K+  L       G AG++AD
Sbjct: 37  GTTIVGVIYGGGSSGEEPGVCLGADTRATGGPIVADKNCEKIHYLAPHIRCCG-AGTAAD 95

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVI 121
              +   +   LE +     R +  +     + +YL   +        +   D T   + 
Sbjct: 96  TEFVTNLISSNLELHALSQGRQARIVTAMTMLKQYLFRYQGHVGAHLVLGGVDSTGPHLF 155

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
           T        +   + +GSG   A++   +      +   A ++  +A+       + +  
Sbjct: 156 TVHAHGSTDKLPYVTMGSGSLAAMAVFESSFKEHMTRQEAIDLVARAIRSGVFNDLGSGS 215

Query: 179 NIVLETLKVG 188
           N+ +  +   
Sbjct: 216 NVDVAVITKN 225


>gi|308470996|ref|XP_003097730.1| CRE-PBS-5 protein [Caenorhabditis remanei]
 gi|308239848|gb|EFO83800.1| CRE-PBS-5 protein [Caenorhabditis remanei]
          Length = 284

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 64/200 (32%), Gaps = 19/200 (9%)

Query: 9   YAVKMH-ATTILTVRK-------DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
            +++    TT L            G +++A D + S G+ +   +  K+  +G   + A 
Sbjct: 57  KSMQFRKGTTTLAFVYEPATPNDKGGIIVAVDSRASSGEYISSKSVMKILDIGDRMV-AT 115

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIA 113
            AG +AD       + K    Y  +   S    A        L            M+   
Sbjct: 116 MAGGAADCQFWTRTVAKYCTLYELREKTSITVSAASKYFANVLYGYRGQGLSVGSMVAGY 175

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA 170
           DK    +     +    +  V ++GSG   A          + + EE   +  +A+  A 
Sbjct: 176 DKKGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKPKMTDEEARNLGLRAIMHAT 235

Query: 171 DICVYTNHNIVLETLKVGDE 190
                +     L  +   ++
Sbjct: 236 YRDSGSGGVCNLCHITPTEK 255


>gi|297661241|ref|XP_002809172.1| PREDICTED: proteasome subunit beta type-9-like [Pongo abelii]
          Length = 218

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 19  GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHQRIYCA-LSGSAADAQAVADM 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +               M+   D+     + G    +
Sbjct: 78  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGM 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG ++      A      S EE  R    A+++A      +   I L T+
Sbjct: 138 LTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 197

Query: 186 KV 187
             
Sbjct: 198 TA 199


>gi|2055299|dbj|BAA19760.1| proteasome subunit Y [Xenopus laevis]
          Length = 230

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 30  GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCC-RSGSAADTQAIADA 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L    +         +        ++               V T     
Sbjct: 89  VTYQLGFHSIELDGPPLVHTAANLFKEMCYRYREDLMAGIIVAGWDKRKGGQVYTVPMGG 148

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      +      + EE  +    A+++A +    +   I L  
Sbjct: 149 MLVHQQFSIGGSGSSYIYGFVDSTYRPGMTKEECLKFTANALALAMERDGSSGGVIRLAA 208

Query: 185 LKVG 188
           +   
Sbjct: 209 ITEE 212


>gi|4506191|ref|NP_002792.1| proteasome subunit beta type-10 precursor [Homo sapiens]
 gi|332846186|ref|XP_001166577.2| PREDICTED: proteasome subunit beta type-10-like [Pan troglodytes]
 gi|730376|sp|P40306|PSB10_HUMAN RecName: Full=Proteasome subunit beta type-10; AltName: Full=Low
           molecular mass protein 10; AltName: Full=Macropain
           subunit MECl-1; AltName: Full=Multicatalytic
           endopeptidase complex subunit MECl-1; AltName:
           Full=Proteasome MECl-1; AltName: Full=Proteasome subunit
           beta-2i; Flags: Precursor
 gi|406227|emb|CAA50709.1| proteasome-like subunit MECL-1 [Homo sapiens]
 gi|2765348|emb|CAA73982.1| proteasome subunit MECl-1 [Homo sapiens]
 gi|16877952|gb|AAH17198.1| Proteasome (prosome, macropain) subunit, beta type, 10 [Homo
           sapiens]
 gi|30704532|gb|AAH52369.1| Proteasome (prosome, macropain) subunit, beta type, 10 [Homo
           sapiens]
 gi|54696312|gb|AAV38528.1| proteasome (prosome, macropain) subunit, beta type, 10 [Homo
           sapiens]
 gi|54696314|gb|AAV38529.1| proteasome (prosome, macropain) subunit, beta type, 10 [Homo
           sapiens]
 gi|61357304|gb|AAX41368.1| proteasome subunit beta type 10 [synthetic construct]
 gi|61357311|gb|AAX41369.1| proteasome subunit beta type 10 [synthetic construct]
 gi|119603593|gb|EAW83187.1| hCG2026222, isoform CRA_b [Homo sapiens]
 gi|189053330|dbj|BAG35141.1| unnamed protein product [Homo sapiens]
 gi|208967164|dbj|BAG73596.1| proteasome (prosome, macropain) subunit beta type 10 [synthetic
           construct]
          Length = 273

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 58/184 (31%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +ADA      
Sbjct: 39  GTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADAEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +  K+E +     R          + + L   +  +         D T   +        
Sbjct: 98  VASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVT--AGILGDLGSGGNVDAC 215

Query: 184 TLKV 187
            +  
Sbjct: 216 VITK 219


>gi|238231384|ref|NP_032972.3| proteasome subunit beta type-6 precursor [Mus musculus]
 gi|84028244|sp|Q60692|PSB6_MOUSE RecName: Full=Proteasome subunit beta type-6; AltName: Full=Low
           molecular mass protein 19; AltName: Full=Macropain delta
           chain; AltName: Full=Multicatalytic endopeptidase
           complex delta chain; AltName: Full=Proteasome delta
           chain; AltName: Full=Proteasome subunit Y; Flags:
           Precursor
 gi|26347247|dbj|BAC37272.1| unnamed protein product [Mus musculus]
 gi|56205379|emb|CAI24014.1| proteasome (prosome, macropain) subunit beta type 6 [Mus musculus]
 gi|74189010|dbj|BAE39271.1| unnamed protein product [Mus musculus]
 gi|74191020|dbj|BAE39351.1| unnamed protein product [Mus musculus]
 gi|123233520|emb|CAM28118.1| proteasome (prosome, macropain) subunit beta type 6 [Mus musculus]
 gi|148680630|gb|EDL12577.1| mCG21162, isoform CRA_b [Mus musculus]
 gi|745475|prf||2016287A housekeeping proteasome:SUBUNIT=2
          Length = 238

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 62/182 (34%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +G VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 33  GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADA 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 92  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 151

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + +E  +    A+++A +    +   I L  
Sbjct: 152 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 211

Query: 185 LK 186
           ++
Sbjct: 212 IQ 213


>gi|114606765|ref|XP_001167429.1| PREDICTED: proteasome subunit beta type-9 isoform 3 [Pan
           troglodytes]
 gi|332823722|ref|XP_003311253.1| PREDICTED: proteasome subunit beta type-9 [Pan troglodytes]
          Length = 218

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 19  GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCA-LSGSAADAQAVADM 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +               M+   D+     + G    +
Sbjct: 78  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGM 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG ++      A      S EE  R    A+++A      +   I L T+
Sbjct: 138 LTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 197

Query: 186 KV 187
             
Sbjct: 198 TA 199


>gi|167999091|ref|XP_001752251.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696646|gb|EDQ82984.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 224

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G V++  D + + G  V    + K+  L     +   +GS+AD+  + + 
Sbjct: 13  GTTIMAVEYNGGVILGADSRTTTGVYVANRASDKITELTDNVYLC-RSGSAADSQVVSDY 71

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITL-VITGMGDV 127
           +   L Q+   L R +        + +     ++ +         DK     V       
Sbjct: 72  VRYFLNQHTILLGRLATVKTASTLVKELSYQNKSFLETGLIVAGWDKYEGGSVYGIPLGG 131

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG SY          +  +   AE +  K++S+A      +   +   T
Sbjct: 132 TLLRLPFATGGSGSSYLYGFLDQAWKSNMTQEEAEALVVKSISLAIARDGASGGVVRTVT 191

Query: 185 LKVG 188
           +   
Sbjct: 192 INEE 195


>gi|297699042|ref|XP_002826635.1| PREDICTED: LOW QUALITY PROTEIN: phosphatidylcholine-sterol
           acyltransferase-like [Pongo abelii]
          Length = 649

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 14/183 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +ADA      
Sbjct: 414 GTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADAEMTTRM 472

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  K+E +     R              + +Y  ++ A +++   D T   + +      
Sbjct: 473 VASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLTGPQLYSVHPHGS 532

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +   +   
Sbjct: 533 YSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAIT--AGILGDLGSGGXVDAC 590

Query: 184 TLK 186
            + 
Sbjct: 591 VIT 593


>gi|54019419|ref|NP_476440.2| proteasome subunit beta type-6 [Rattus norvegicus]
 gi|84028245|sp|P28073|PSB6_RAT RecName: Full=Proteasome subunit beta type-6; AltName:
           Full=Macropain delta chain; AltName: Full=Multicatalytic
           endopeptidase complex delta chain; AltName:
           Full=Proteasome chain 5; AltName: Full=Proteasome delta
           chain; AltName: Full=Proteasome subunit Y; Flags:
           Precursor
 gi|37231619|gb|AAH58451.1| Proteasome (prosome, macropain) subunit, beta type 6 [Rattus
           norvegicus]
 gi|149053199|gb|EDM05016.1| rCG33991, isoform CRA_a [Rattus norvegicus]
          Length = 238

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 33  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADA 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 92  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 151

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + +E  +    A+++A +    +   I L  
Sbjct: 152 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 211

Query: 185 LK 186
           ++
Sbjct: 212 IQ 213


>gi|297290556|ref|XP_001108087.2| PREDICTED: proteasome subunit beta type-9-like isoform 1 [Macaca
           mulatta]
 gi|146157613|gb|ABQ08185.1| proteasome subunit beta type 9-like protein [Macaca fascicularis]
          Length = 219

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIYCA-LSGSAADAQAVADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G    +
Sbjct: 79  AAYQLELHGIELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQHEGGQVYGTLGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE  R    A+++A      +   + L T+
Sbjct: 139 LTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVVYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|48146081|emb|CAG33263.1| PSMB10 [Homo sapiens]
          Length = 273

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 58/184 (31%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +ADA      
Sbjct: 39  GTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADAEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +  K+E +     R          + + L   +  +         D T   +        
Sbjct: 98  VASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVT--AGILGDLGSGGNVDAC 215

Query: 184 TLKV 187
            +  
Sbjct: 216 VITK 219


>gi|23110925|ref|NP_002789.1| proteasome subunit beta type-6 precursor [Homo sapiens]
 gi|20532407|sp|P28072|PSB6_HUMAN RecName: Full=Proteasome subunit beta type-6; AltName:
           Full=Macropain delta chain; AltName: Full=Multicatalytic
           endopeptidase complex delta chain; AltName:
           Full=Proteasome delta chain; AltName: Full=Proteasome
           subunit Y; Flags: Precursor
 gi|12654059|gb|AAH00835.1| Proteasome (prosome, macropain) subunit, beta type, 6 [Homo
           sapiens]
 gi|32879961|gb|AAP88811.1| proteasome (prosome, macropain) subunit, beta type, 6 [Homo
           sapiens]
 gi|48146247|emb|CAG33346.1| PSMB6 [Homo sapiens]
 gi|60654877|gb|AAX32003.1| proteasome subunit beta type 6 [synthetic construct]
 gi|60654879|gb|AAX32004.1| proteasome subunit beta type 6 [synthetic construct]
 gi|60654881|gb|AAX32005.1| proteasome subunit beta type 6 [synthetic construct]
 gi|60654883|gb|AAX32006.1| proteasome subunit beta type 6 [synthetic construct]
 gi|119610813|gb|EAW90407.1| proteasome (prosome, macropain) subunit, beta type, 6 [Homo
           sapiens]
 gi|123980626|gb|ABM82142.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
           construct]
 gi|123995447|gb|ABM85325.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
           construct]
 gi|189053089|dbj|BAG34711.1| unnamed protein product [Homo sapiens]
 gi|208967174|dbj|BAG73601.1| proteasome (prosome, macropain) subunit, beta type, 6 [synthetic
           construct]
          Length = 239

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|134109529|ref|XP_776879.1| hypothetical protein CNBC3700 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259559|gb|EAL22232.1| hypothetical protein CNBC3700 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 303

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 17/190 (8%)

Query: 15  ATTILTVRKDGV-------VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
            TTI+ V   G        V +  D + + G  V   N  K+  L       G AG++AD
Sbjct: 37  GTTIVGVIYGGGSSGEEPGVCLGADTRATGGPIVADKNCEKIHYLAPHIRCCG-AGTAAD 95

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVI 121
              +   +   LE +     R +  +     + +YL   +        +   D T   + 
Sbjct: 96  TEFVTNLISSNLELHALSQGRQARIVTAMTMLKQYLFRYQGHVGAHLVLGGVDATGPHLF 155

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
           T        +   + +GSG   A++   +      +   A ++  +A+       + +  
Sbjct: 156 TVHAHGSTDKLPYVTMGSGSLAAMAVFESSFKEHMTRQEAIDLVARAIRSGVFNDLGSGS 215

Query: 179 NIVLETLKVG 188
           N+ +  +   
Sbjct: 216 NVDVAVITKN 225


>gi|18124169|gb|AAL59852.1|AF357920_1 proteasome beta-subunit [Ginglymostoma cirratum]
          Length = 217

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D +VS G+ +      K+  L      A  +GS+ADA  + + 
Sbjct: 18  GTTIIAVEFDGGVVIGSDSRVSAGEAICNRVMNKLSPLHDRIYCA-LSGSAADAQAIADS 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +LE +  +   + +  A          KY   L A +++A  D+     +      +
Sbjct: 77  VNYQLELHSIETGDAPLVQAAASVVKNISYKYKEELTAHLIVAGWDRKKKGQVYATLGGM 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG  Y      A    + S +E       A+++A      +   + L T+
Sbjct: 137 IIRQPFSVGGSGSFYIYGYVDATYKEEMSKDECLTFVINAITLAIGRDGASGGVVYLTTI 196

Query: 186 KVG 188
              
Sbjct: 197 TEK 199


>gi|4506205|ref|NP_002791.1| proteasome subunit beta type-9 proprotein [Homo sapiens]
 gi|417529|sp|P28065|PSB9_HUMAN RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
           molecular mass protein 2; AltName: Full=Macropain chain
           7; AltName: Full=Multicatalytic endopeptidase complex
           chain 7; AltName: Full=Proteasome chain 7; AltName:
           Full=Proteasome subunit beta-1i; AltName: Full=Really
           interesting new gene 12 protein; Flags: Precursor
 gi|34635|emb|CAA47024.1| LMP2 [Homo sapiens]
 gi|34656|emb|CAA78700.1| MHC-encoded proteasome subunit gene [Homo sapiens]
 gi|1054744|emb|CAA60784.1| LMP2 [Homo sapiens]
 gi|41388830|gb|AAH65513.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|49456273|emb|CAG46457.1| PSMB9 [Homo sapiens]
 gi|55961338|emb|CAI17715.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|55961480|emb|CAI18141.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|56207312|emb|CAI18627.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|119624059|gb|EAX03654.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2), isoform CRA_b [Homo
           sapiens]
 gi|168984796|emb|CAQ08450.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985578|emb|CAQ10289.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|261860734|dbj|BAI46889.1| proteasome (prosome, macropain) subunit, beta type, 9 [synthetic
           construct]
          Length = 219

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCA-LSGSAADAQAVADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G    +
Sbjct: 79  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG ++      A      S EE  R    A+++A      +   I L T+
Sbjct: 139 LTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|332246133|ref|XP_003272204.1| PREDICTED: proteasome subunit beta type-9-like [Nomascus
           leucogenys]
          Length = 219

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHQRIYCA-LSGSAADAQAVADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G    +
Sbjct: 79  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE  R    A+++A      +   I L T+
Sbjct: 139 LTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|83816981|ref|NP_001033050.1| proteasome subunit beta type-9 [Sus scrofa]
 gi|311260176|ref|XP_003128374.1| PREDICTED: proteasome subunit beta type-9-like [Sus scrofa]
 gi|83320492|gb|ABC02872.1| proteasome beta 9 subunit [Sus scrofa]
 gi|84514209|gb|ABC59113.1| proteasome beta 9 subunit [Sus scrofa]
 gi|110276961|gb|ABG57117.1| proteasome beta 9 subunit [Sus scrofa]
 gi|147225182|emb|CAN13314.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional protease 2) [Sus scrofa]
          Length = 219

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L      A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHHRIYCA-LSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +               M+   D+     + G    +
Sbjct: 79  AAYQLELHGMELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|195127155|ref|XP_002008034.1| GI12054 [Drosophila mojavensis]
 gi|193919643|gb|EDW18510.1| GI12054 [Drosophila mojavensis]
          Length = 322

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 74/198 (37%), Gaps = 11/198 (5%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M+ MG K        TT++ +  +  V+IA D + +    V      K+ RL +     G
Sbjct: 28  MLKMGYKPPLAITTGTTVVGLLFNAGVMIATDSRATRSNLVNSNATPKICRLQRNIYCGG 87

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA- 113
            +G ++D   L   +E++                 + ++AK   M    R + + +L   
Sbjct: 88  -SGYASDLSRLTRLMEEQCAMQREATNGRILPAVCAKQVAKTLLMSAMGRMMISFVLGGV 146

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
           D     + +   D     +   ++GSG   A+    +      +   A E+   A+S   
Sbjct: 147 DPEGVHLYSVHFDGTTEISQYTSVGSGQYSAMGIMESRWRPDMTEDEARELIVDAVSAGI 206

Query: 171 DICVYTNHNIVLETLKVG 188
           D  + +  +I L  ++  
Sbjct: 207 DHDLSSGSSIDLVVIRSN 224


>gi|145483595|ref|XP_001427820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145552816|ref|XP_001462083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394903|emb|CAK60422.1| unnamed protein product [Paramecium tetraurelia]
 gi|124429921|emb|CAK94710.1| unnamed protein product [Paramecium tetraurelia]
          Length = 239

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 77/202 (38%), Gaps = 20/202 (9%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            D+      ++ T+L V   G V++AGD ++S G  ++  +A K+ +L    ++A  AG 
Sbjct: 26  SDQWSPYHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLAT-AGQ 84

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
            AD   L + L+++L+ Y  Q    +        + + L +               D+  
Sbjct: 85  YADFIALRKFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDENN 144

Query: 118 TLVITGMGDV-LEPENGVMAIGSGGSYALSAARALMS-----------TQNSAEEIARKA 165
             V+ G   +    +      GSG    ++     +            T+    +I    
Sbjct: 145 HGVVYGYDAIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNKINKTIPQTREEILDIILDC 204

Query: 166 MSIAADICVYTNHNIVLETLKV 187
            S AA+  ++T  N+ +  +  
Sbjct: 205 FSCAAERDIHTGDNVEILIITA 226


>gi|223993127|ref|XP_002286247.1| probable 20S proteasome beta subunit [Thalassiosira pseudonana
           CCMP1335]
 gi|220977562|gb|EED95888.1| probable 20S proteasome beta subunit [Thalassiosira pseudonana
           CCMP1335]
          Length = 220

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 13/187 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L+    G +V+A D + S+G  V     +KV  +   NI+   AG +AD    + 
Sbjct: 16  HGTTTLSFVFQGGIVVAVDSRASIGNFVGSKTTQKVLPV-SRNILGSMAGGAADCSFWIR 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGMG 125
            L  + + +     +          +   L     M L     I          +     
Sbjct: 75  YLRSEAKIHELYDGKGISVARASRVLSNILYQNRGMDLSVGTMIMGYHSRDGFSIYYVDN 134

Query: 126 DVLEPENGVMAIGSGGSYALSAARA-LMSTQNSAEEIA---RKAMSIAADICVYTNHNIV 181
             +  +  + ++GSG ++AL            + EE      KA+  A      +   I 
Sbjct: 135 TGVRIKGDMFSVGSGSTFALGILDTEENRFDMTEEEAVALGIKAIRHATLRDAMSGGYIG 194

Query: 182 LETLKVG 188
           +  +   
Sbjct: 195 VYLITKD 201


>gi|77404250|ref|NP_001029212.1| proteasome subunit beta type-10 precursor [Bos taurus]
 gi|108860904|sp|Q3T0T1|PSB10_BOVIN RecName: Full=Proteasome subunit beta type-10; AltName:
           Full=Proteasome subunit beta-2i; Flags: Precursor
 gi|74353934|gb|AAI02273.1| Proteasome (prosome, macropain) subunit, beta type, 10 [Bos taurus]
 gi|296477894|gb|DAA20009.1| proteasome subunit beta type-10 precursor [Bos taurus]
          Length = 273

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V      K+  +       G AG +ADA      
Sbjct: 39  GTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCG-AGVAADAEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
               +E +     R          + + L   +  +         D T   + +      
Sbjct: 98  AASNMELHALSTGRECRVATVTRMLRQTLFRYQGYVGASLIVGGVDFTGPQLYSVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   A++          +   A+E+  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAIT--AGILGDLGSGGNVDAC 215

Query: 184 TLKV 187
            +  
Sbjct: 216 VITA 219


>gi|293345272|ref|XP_002725989.1| PREDICTED: proteasome subunit beta type 6-like [Rattus norvegicus]
 gi|293357141|ref|XP_002729074.1| PREDICTED: proteasome subunit beta type 6-like [Rattus norvegicus]
 gi|47169486|tpe|CAE48380.1| TPA: proteasome subunit beta type 6-like [Rattus norvegicus]
 gi|149048484|gb|EDM01025.1| rCG63409 [Rattus norvegicus]
          Length = 238

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 33  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADA 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 92  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 151

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + +E  +    A+++A +    +   I L  
Sbjct: 152 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAA 211

Query: 185 LK 186
           ++
Sbjct: 212 IQ 213


>gi|53133370|emb|CAG32014.1| hypothetical protein RCJMB04_16a5 [Gallus gallus]
          Length = 201

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 7/147 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVFKDGVVLGADTRATEGMVVADKNCSKIHYISSNIYCCG-AGTAADTEMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 IASNLELHALSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ 155
             +   + +GSG   A++     + T 
Sbjct: 162 TDKLPYVTMGSGSLAAMAIFEDKIQTG 188


>gi|300708256|ref|XP_002996311.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
 gi|239605602|gb|EEQ82640.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
          Length = 230

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 6/183 (3%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +M  TTI+ V+ D  V++  D + S+G  V      K+ ++           ++      
Sbjct: 34  EMTGTTIMAVKYDEGVLVGADCRTSMGTYVSSRFTDKLTKISDNIYCCRSGSAADTQAIA 93

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIADKTITLVITGMGDVL 128
               E             SV+ A       + K    L  +I+    T   +        
Sbjct: 94  QYVKEVVQRSSFIDKEIPSVKKAAMIAKEIIYKNPSLLAGLIIAGYDTSPKIYNISLGGT 153

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E      GSG +Y       L     +   A E  ++A++ A      +  +I + ++
Sbjct: 154 ITEADWQIGGSGSAYIYGLCDTLYKDNMTLEEAIEFVKQAITCAIRRDNASGGSIRMASI 213

Query: 186 KVG 188
              
Sbjct: 214 SRE 216


>gi|114665818|ref|XP_001161989.1| PREDICTED: proteasome subunit beta type-6 isoform 2 [Pan
           troglodytes]
 gi|114665820|ref|XP_511290.2| PREDICTED: proteasome subunit beta type-6 isoform 3 [Pan
           troglodytes]
 gi|332847025|ref|XP_003339341.1| PREDICTED: proteasome subunit beta type-6 [Pan troglodytes]
 gi|332847027|ref|XP_003315370.1| PREDICTED: proteasome subunit beta type-6 [Pan troglodytes]
          Length = 239

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 223

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 57/169 (33%), Gaps = 11/169 (6%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
              VV+A D +V+ G  V     +KV  L     I   AG  ADA TL++ ++  +  Y 
Sbjct: 25  KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAI-TIAGRVADAQTLIDLIKANINYYQ 83

Query: 84  NQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPENGVMA 136
               +     A        + +       A       D     +          E  ++A
Sbjct: 84  IMRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGPHLYNLDPFGSVTEEKLIA 143

Query: 137 IGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
            GSG   A               SA E+A +A+S A      +  ++ +
Sbjct: 144 TGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDV 192


>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 220

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 57/169 (33%), Gaps = 11/169 (6%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
              VV+A D +V+ G  V     +KV  L     I   AG  ADA TL++ ++  +  Y 
Sbjct: 22  KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAI-TIAGRVADAQTLIDLIKANINYYQ 80

Query: 84  NQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPENGVMA 136
               +     A        + +       A       D     +          E  ++A
Sbjct: 81  IMRGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGPHLYNLDPFGSVTEEKLIA 140

Query: 137 IGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
            GSG   A               SA E+A +A+S A      +  ++ +
Sbjct: 141 TGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDV 189


>gi|123447011|ref|XP_001312251.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121894091|gb|EAX99321.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 224

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 63/199 (31%), Gaps = 19/199 (9%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSA 66
              +MH  T + +  D  VVI  D ++S+  ++   +  ++ ++    +I   GF G   
Sbjct: 14  SPYEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDID 73

Query: 67  DAFTLLE--RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
              T +    L  + + +    + S      +    K        IL+          + 
Sbjct: 74  AFITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEGKGKLY 133

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN------------SAEEIARKAMSIA 169
                    +    + GSG S A     +   T +             A+ I R A+   
Sbjct: 134 GYDPVGTIEDLHYDSNGSGSSLAAPLLDSAFGTIHHNTRPFPAVSLQDAKNIVRDAICSV 193

Query: 170 ADICVYTNHNIVLETLKVG 188
            +  +YT   + L      
Sbjct: 194 TERDIYTGDALQLCVFTKD 212


>gi|301778105|ref|XP_002924515.1| PREDICTED: proteasome subunit beta type-6-like [Ailuropoda
           melanoleuca]
          Length = 239

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +G VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFEGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|222136624|ref|NP_001138398.1| proteasome subunit beta type-6 [Sus scrofa]
          Length = 241

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 36  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 94

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 95  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIVAGWDPQEGGQVYSVPMGG 154

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 155 MMVRQAFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 214

Query: 185 L 185
           +
Sbjct: 215 I 215


>gi|194763855|ref|XP_001964048.1| GF20928 [Drosophila ananassae]
 gi|190618973|gb|EDV34497.1| GF20928 [Drosophila ananassae]
          Length = 1093

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 15/186 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ +   G V+IA D + ++G  V   ++RK+  +    I AG AG + D   L++ 
Sbjct: 49  GTTVVGLIYRGGVIIASDSRATVGNMVPMKSSRKIHPIQDN-IFAGGAGVARDIRALVDL 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-----MDKYLRNLEAMILIA--DKTITLVITGMGDV 127
              ++  +        V +    +     + +Y   L A  +IA  DK    +     D 
Sbjct: 108 THAQMNIHRMNTGGRVVPVRCANQFVKQVLFRYRGALGANFIIAGVDKEGAHLFCTRFDG 167

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHNIVL 182
                    IGSGG  A+        ++ S   A  +  +A  +AA +    ++ +   +
Sbjct: 168 TTDVLPYATIGSGGMPAMGILETRFKSRMSESAARGLIVEA--VAAGLLNDPFSGNETHI 225

Query: 183 ETLKVG 188
             ++  
Sbjct: 226 CIIRKD 231


>gi|147899680|ref|NP_001089683.1| hypothetical protein LOC734745 [Xenopus laevis]
 gi|76780130|gb|AAI06328.1| MGC130855 protein [Xenopus laevis]
          Length = 247

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 33  GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCC-RSGSAADTQAIADA 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L    +         +        ++               V T     
Sbjct: 92  VTYQLGFHSIELEGPPLVHTAASLFKEMCYRYREDLMAGIIVAGWDKRRGGQVYTVPMGG 151

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      +      S EE  +    A+++A +    +   I L  
Sbjct: 152 MLVHQQFSIGGSGSSYIYGFVDSTYRPGMSKEECLKFTANALALAMERDGSSGGIIRLAA 211

Query: 185 LKVG 188
           +   
Sbjct: 212 ITEE 215


>gi|75763960|ref|ZP_00743587.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74488553|gb|EAO52142.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 132

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 59/98 (60%), Positives = 70/98 (71%), Gaps = 1/98 (1%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            HATTI  V  +G   +AGDGQV++G   VMK  ARKVRRL +G ++AGFAGS ADAFTL
Sbjct: 4   FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRRLFQGKVLAGFAGSVADAFTL 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM 109
            E  E KLE+Y   L R++VE+AK WR DK LR LEAM
Sbjct: 64  FEMFEGKLEEYNGNLQRAAVEMAKQWRGDKMLRQLEAM 101


>gi|148228778|ref|NP_001081217.1| proteasome subunit Y [Xenopus laevis]
 gi|76779604|gb|AAI06526.1| LOC397716 protein [Xenopus laevis]
          Length = 233

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 33  GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCC-RSGSAADTQAIADA 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L    +         +        ++               V T     
Sbjct: 92  VTYQLGFHSIELDGPPLVHTAANLFKEMCYRYREDLMAGIIVAGWDKRKGGQVYTVPMGG 151

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      +      + EE  +    A+++A +    +   I L  
Sbjct: 152 MLVHQQFSIGGSGSSYIYGFVDSTYRPGMTKEECLKFTANALALAMERDGSSGGVIRLAA 211

Query: 185 LKVG 188
           +   
Sbjct: 212 ITEE 215


>gi|325115615|emb|CBZ51170.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
          Length = 246

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 20/201 (9%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M  +      +  T++ V  +   V  GD ++S G ++      K+ +L    ++A  +G
Sbjct: 32  MERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRFQSKITKLTDKVVLAT-SG 90

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--- 120
             AD  TL   L+ ++EQY +Q        A    +   L +           +  +   
Sbjct: 91  MQADKTTLHNLLQIRIEQYTHQHRHPPSLNAIAQLLSTMLYSRRFFPFYTFNVLCGIDEN 150

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAE---EIARK 164
                                 G+G    +      +S           + E   +I + 
Sbjct: 151 GKGAVYGYDAIGSFEAARYNCAGTGAHLIMPVLDNQISRNNQQGEKAPLTREQVVDIIKS 210

Query: 165 AMSIAADICVYTNHNIVLETL 185
           A++ A +  ++T     +  +
Sbjct: 211 AVASAGERDIFTGDQAEVVMI 231


>gi|182892146|gb|AAI65916.1| Psmb9a protein [Danio rerio]
          Length = 218

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D +VS G++V+     K+  L    I     GS+ADA T+ E 
Sbjct: 19  GTTIIAVTFDGGVVIGSDSRVSAGESVVNRVMNKLSPLHD-KIYCALTGSAADAQTIAEI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++    +  +          KY   L A +++A  DK     +      L
Sbjct: 78  VNYQLDVHSIEVEDDPLVCSAATLVKNISYKYKEELSAHLIVAGWDKKGGGQVYATLSGL 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
             +      GSG  Y      A      +  E       A+++A      +     + T+
Sbjct: 138 LTKQPFAIGGSGSFYINGFVDAEYKKNMTKRECQEFIVNALTLAMGRDGSSGGVAYVVTI 197

Query: 186 KVG 188
              
Sbjct: 198 DKD 200


>gi|326519234|dbj|BAJ96616.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 246

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+A D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 25  GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQLTDNVYVC-RSGSAADTQIISDY 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L Q+  QL + +        +     +    L+A +++          + +     
Sbjct: 84  VRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGG 143

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG SY             +   AE+   K +S+A      +   +   T
Sbjct: 144 TILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDGASGGVVRTVT 203

Query: 185 LKVG 188
           +   
Sbjct: 204 INEE 207


>gi|194223397|ref|XP_001493056.2| PREDICTED: similar to proteasome subunit beta type 9-like protein
           [Equus caballus]
          Length = 219

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L      A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHHRIYCA-LSGSAADAQAVADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G    +
Sbjct: 79  AAYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGTLGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE  R    A+++A      +   I L T+
Sbjct: 139 LTRQPFAIGGSGSTYIYGYVDAAYKQGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|392959|gb|AAC50154.1| LMP-2 [Homo sapiens]
 gi|896224|gb|AAC60646.1| proteasome LMP2.s [Homo sapiens]
          Length = 209

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 10  GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCA-LSGSAADAQAVADM 68

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +               M+   D+     + G    +
Sbjct: 69  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGM 128

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG ++      A      S EE  R    A+++A      +   I L T+
Sbjct: 129 LTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 188

Query: 186 KV 187
             
Sbjct: 189 TA 190


>gi|558528|dbj|BAA06098.1| proteasome subunit Y [Homo sapiens]
          Length = 239

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------ITGMGDV 127
           +  +L  +  +L    +         +        ++                 +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQGYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|302564219|ref|NP_001181793.1| proteasome subunit beta type-9 [Macaca mulatta]
          Length = 209

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 10  GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIYCA-LSGSAADAQAVADM 68

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G    +
Sbjct: 69  AAYQLELHGIELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQHEGGQVYGTLGGM 128

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE  R    A+++A      +   + L T+
Sbjct: 129 LTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVVYLVTI 188

Query: 186 KV 187
             
Sbjct: 189 TA 190


>gi|61367386|gb|AAX42990.1| proteasome subunit beta type 9 [synthetic construct]
          Length = 220

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCA-LSGSAADAHAVADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G    +
Sbjct: 79  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG ++      A      S EE  R    A+++A      +   I L T+
Sbjct: 139 LTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|148227692|ref|NP_001079339.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Xenopus laevis]
 gi|2055297|dbj|BAA19759.1| LMP2 [Xenopus laevis]
 gi|213623168|gb|AAI69381.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional protease 2) [Xenopus laevis]
 gi|213624900|gb|AAI69377.1| Proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional protease 2) [Xenopus laevis]
          Length = 215

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 75/198 (37%), Gaps = 14/198 (7%)

Query: 4   MGDKHYAVKMH----ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
           M               TTI+ V  DG VV+  D +VS G  V+     K+  + +    A
Sbjct: 1   MPASRNPYTAREVSTGTTIIAVEFDGGVVLGSDSRVSAGDAVVNRVFNKLAPVHQRIYCA 60

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA-- 113
             +GS+ADA  + +     +E +  ++    + LA          KY   + A +++A  
Sbjct: 61  -LSGSAADAQAVADMAHYHMEVHSIEMEAPPLVLAAANLIKGISYKYKEEIMAHLIVAGW 119

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAA 170
           D+     + G    +         GSG +Y      +      S EE    A +A+S+A 
Sbjct: 120 DRKHGGQVYGTLGGMIIRQPFTIGGSGSTYIYGFVDSKFKPGMSREECERFAVQALSLAM 179

Query: 171 DICVYTNHNIVLETLKVG 188
           +    +   I L T+   
Sbjct: 180 ERDGSSGGVIYLVTVTKE 197


>gi|281352167|gb|EFB27751.1| hypothetical protein PANDA_013817 [Ailuropoda melanoleuca]
          Length = 238

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +G VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFEGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|326495934|dbj|BAJ90589.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 244

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+A D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 23  GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQLTDNVYVC-RSGSAADTQIISDY 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L Q+  QL + +        +     +    L+A +++          + +     
Sbjct: 82  VRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGG 141

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG SY             +   AE+   K +S+A      +   +   T
Sbjct: 142 TILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDGASGGVVRTVT 201

Query: 185 LKVG 188
           +   
Sbjct: 202 INEE 205


>gi|321253908|ref|XP_003192894.1| proteasome subunit, beta type, 7 [Cryptococcus gattii WM276]
 gi|317459363|gb|ADV21107.1| Proteasome subunit, beta type, 7, putative [Cryptococcus gattii
           WM276]
          Length = 303

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 17/190 (8%)

Query: 15  ATTILTVRKDGV-------VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
            TTI+ V   G        V +  D + + G  V   N  K+  L       G AG++AD
Sbjct: 37  GTTIVGVIYGGGSSGEEPGVCLGADTRATGGPIVADKNCEKIHYLAPHIRCCG-AGTAAD 95

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVI 121
              +   +   LE +     R +  +     + +YL   +        +   D T   + 
Sbjct: 96  TEFVTNLISSNLELHALSQGRQARIVTAMTMLKQYLFRYQGHVGAHLVLGGVDATGPQLF 155

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
           T        +   + +GSG   A++   +      +   A ++  +A+       + +  
Sbjct: 156 TVHAHGSTDKLPYVTMGSGSLAAMAVFESSFKEHMTRQEAIDLVARAIRSGVFNDLGSGS 215

Query: 179 NIVLETLKVG 188
           N+ +  +   
Sbjct: 216 NVDVAVITKN 225


>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
           14429]
 gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
           14429]
          Length = 205

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T + ++    VV+A + +V+ G T+   + +KV ++     IA   G  AD   L +  
Sbjct: 10  GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGIASI-GILADMQVLTKIA 68

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVL 128
           +  +  Y           +    +   L     +           D     +        
Sbjct: 69  KAYMSLYALDTKTRPSIRSAAKLLSYVLFANRVLPYFVEVLVGGVDDEGPHLFIMDSLGS 128

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E+   A+G+G   A++   +      +   A E+A KA++ +      +   I + T+
Sbjct: 129 LIEDDYAAVGTGTKLAIAILESNYKPSMTVKEARELAIKAINQSISRDPVSGDGIDILTI 188

Query: 186 KVG 188
              
Sbjct: 189 TGN 191


>gi|159041872|ref|YP_001541124.1| proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
 gi|302595705|sp|A8M8R5|PSB2_CALMQ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|157920707|gb|ABW02134.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
          Length = 200

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 14/195 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M D+   +     T + ++    VV+A + +VS G  +M  + +KV  +     +A  +G
Sbjct: 1   MSDQLELMT---GTTVGIKAKDGVVLAAEKRVSYGFYLMSKSGKKVYPITNRIGLA-SSG 56

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT 116
             AD  T+ + +   +     ++ R     A    +   L   + M  IA       D+ 
Sbjct: 57  ILADIQTITKVIRANIANMEIEMKRPVSVRAAAKLLSIMLFQNKYMPYIAETMVGGIDEE 116

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +          E+   A+G+G   A+       S+  +   A+E+A KA+  A    
Sbjct: 117 GPKLFILDSWGSLIEDDFAALGNGARTAIGLIETGYSSSITVKEAKELAIKAIKEAIARD 176

Query: 174 VYTNHNIVLETLKVG 188
             +   I    +   
Sbjct: 177 PTSGDGIDTLVITGN 191


>gi|190359942|sp|A7KE01|PB6LA_SALSA RecName: Full=Proteasome subunit beta type-6-A like protein;
           AltName: Full=Low molecular mass protein 2-delta-A;
           Flags: Precursor
 gi|146147390|gb|ABQ01993.1| PSMB9a-like [Salmo salar]
 gi|148362164|gb|ABQ59686.1| PSMB9a-like protein [Salmo salar]
 gi|209737398|gb|ACI69568.1| Proteasome subunit beta type-6 precursor [Salmo salar]
          Length = 217

 Score =  100 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 16  GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + ++  +  Q+    +  A               L+A  + A         V T    
Sbjct: 75  AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +         GSG +Y    A A      S EE    A+ A+++A      +     L 
Sbjct: 135 GMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGGVAHLV 194

Query: 184 TLKVG 188
            +   
Sbjct: 195 VITEE 199


>gi|19113087|ref|NP_596295.1| 20S proteasome component beta 1 Pre3 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|17380244|sp|O43063|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6; Flags:
           Precursor
 gi|2832891|emb|CAA16832.1| 20S proteasome component beta 1 Pre3 (predicted)
           [Schizosaccharomyces pombe]
          Length = 226

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +R    V++A D + ++G  +      K+ +L         +GS+AD  T+ + 
Sbjct: 24  GTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCC-RSGSAADTQTVADL 82

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP---- 130
           L+  L  Y  Q               +     + M+              GDV       
Sbjct: 83  LKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGG 142

Query: 131 ---ENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
              +  +   GSG ++      A      + EE     + A+++A +    +   I +  
Sbjct: 143 SLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVI 202

Query: 185 LKVG 188
           L   
Sbjct: 203 LNKD 206


>gi|118576729|ref|YP_876472.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
 gi|118195250|gb|ABK78168.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
          Length = 195

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 55/177 (31%), Gaps = 11/177 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    VV+  D + S G  +   N  K++R+     +   AG  ADA  +++ L   
Sbjct: 1   MGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGL-TLAGGVADAQNIVDVLRYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPE 131
              +  +        +                 +A       D     +          E
Sbjct: 60  ASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAVGPALYNIDMFGSVEE 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
              +  GSG   A            +A+E   +A +A+  A    + T   I +  +
Sbjct: 120 KSYVTTGSGSPVAYGTLEEEYRADLTADEAKGVALRAVKAAITRNIGTGDGINVAVI 176


>gi|229820725|ref|YP_002882251.1| 20S proteasome A and B subunits [Beutenbergia cavernae DSM 12333]
 gi|302595821|sp|C5BVA2|PSB_BEUC1 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|229566638|gb|ACQ80489.1| 20S proteasome A and B subunits [Beutenbergia cavernae DSM 12333]
          Length = 272

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 14/156 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HATTI+ +   G +V+AGD + ++G  +      KV    + + I G AG++     L+ 
Sbjct: 46  HATTIVALSFAGGIVMAGDRRATMGSFIAHREIEKVFPGDEYSAI-GIAGTAGIGVELVR 104

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL----- 128
             + +LE +            K  R+   LR    + L     + L      D       
Sbjct: 105 LFQLELEHFEKIEGAMLSLEGKANRLTTLLRGNLGLALQGLAAVPLFGGYDLDRAAGRIF 164

Query: 129 --------EPENGVMAIGSGGSYALSAARALMSTQN 156
                     E    +IGSGG +A  + + L     
Sbjct: 165 SYDVTGGRYEERNHHSIGSGGMFARGSLKKLWRPGL 200


>gi|159488463|ref|XP_001702229.1| hypothetical protein CHLREDRAFT_133001 [Chlamydomonas reinhardtii]
 gi|158271266|gb|EDO97089.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 245

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 62/202 (30%), Gaps = 22/202 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSA 66
                +  T++ V  +   ++A   ++S G +++   A  + +LG  +  +  G  G   
Sbjct: 32  SPYDDNGGTVVAVAGEDYCIVAASTRMSTGFSILTREATMMLQLGPQSRQVGRGREGLMH 91

Query: 67  DAFTLLERLEKKLEQYPNQLLRS----SVELAKDWRMDKYLRNLEAMILIADKTITL--- 119
                     ++L++  +Q   +    +  L  +    K         L A         
Sbjct: 92  VRRLAGVVCGRRLKKGWDQDKEAELWGAGRLLSNTLYYKRFFPFYTFNLCAGLDEQGRGA 151

Query: 120 VITGMGDVLEPENGVMAIGSG-GSYALSAARALMS------------TQNSAEEIARKAM 166
           V           +G    G G     L      +             T ++A ++ + A 
Sbjct: 152 VYNYDAIGSYERSGYFCQGFGRSRRFLGYCDLRLEARANTPPPSHTPTSSTALDLVKDAF 211

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             A +  +YT   + +  +   
Sbjct: 212 VSAGERDIYTGDQVEILIITRE 233


>gi|111226971|ref|XP_001134620.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
 gi|74926737|sp|Q86A21|PSB1_DICDI RecName: Full=Proteasome subunit beta type-1
 gi|90971293|gb|EAS66954.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
          Length = 236

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 65/204 (31%), Gaps = 23/204 (11%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSS 65
           +  A   +  T+L V      VIAGD ++S G   +      K+ +L K  ++A  +G  
Sbjct: 22  RFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLAT-SGMQ 80

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--------TI 117
           AD   L +RL+  LE +  +  +     A    +   L                      
Sbjct: 81  ADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEQGE 140

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAAR----------ALMSTQNSAEEI---ARK 164
             + T             + GSG    +                 +   S E++    + 
Sbjct: 141 GWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKFNQQIVEGNKDVSCEQVVSFVKD 200

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
           +++ A +  +YT     +  +   
Sbjct: 201 SITSAGERDIYTGDFADIVVVDKN 224


>gi|73955410|ref|XP_849241.1| PREDICTED: similar to Proteasome subunit beta type 6 precursor
           (Proteasome delta chain) (Macropain delta chain)
           (Multicatalytic endopeptidase complex delta chain)
           (Proteasome subunit Y) [Canis familiaris]
          Length = 239

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +G VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFEGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      A      + EE  +    A+++A +    +   I L  
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAA 212

Query: 185 L 185
           +
Sbjct: 213 I 213


>gi|116780859|gb|ABK21850.1| unknown [Picea sitchensis]
          Length = 233

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G  V+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 13  GTTIIGVTYNGGTVLGADSRTSTGMYVANRASDKITQLTDNVYLC-RSGSAADSQVVSDY 71

Query: 75  LEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L Q+  QL + +                   LE  +++          + +     
Sbjct: 72  VRYFLHQHIIQLGQPATVKVTANLIRLLSYNNKNTLETGLIVGGWDKYEGGSIYSVPLGG 131

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG SY             S   AE +  K +S+A      +   +    
Sbjct: 132 TMLQLPFAIGGSGSSYLYGFLDQAWKDGMSKEEAEALVVKCVSLAIARDGASGGVVRTVV 191

Query: 185 LKVG 188
           +   
Sbjct: 192 INSE 195


>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 201

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
            +     T L +R    VVIA + + + G  VM   ARKV ++   ++ A  AG  AD  
Sbjct: 4   PLYYPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKI-SNSVGAACAGVVADMQ 62

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVIT 122
            +++ +   +  Y  +             +   L                 D     VI 
Sbjct: 63  NMIKEVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGPHVIV 122

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHN 179
                   E+    +G+G   A+     L     SA EI   A KA+  +      + + 
Sbjct: 123 LDPLGSMIEDDYAVVGTGAEVAVGVIENLYRKDMSATEIRDLATKAIKASIARDAGSGNG 182

Query: 180 IVLE 183
           I L 
Sbjct: 183 IDLL 186


>gi|54696310|gb|AAV38527.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional protease 2) [synthetic construct]
 gi|61367394|gb|AAX42991.1| proteasome subunit beta type 9 [synthetic construct]
          Length = 220

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG +V+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGIVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCA-LSGSAADAQAVADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G    +
Sbjct: 79  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG ++      A      S EE  R    A+++A      +   I L T+
Sbjct: 139 LTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|156095478|ref|XP_001613774.1| proteasome subunit beta type 1 [Plasmodium vivax SaI-1]
 gi|148802648|gb|EDL44047.1| proteasome subunit beta type 1, putative [Plasmodium vivax]
          Length = 241

 Score = 99.7 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 20/197 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T++ V     V++A D ++SL  ++   +  K+ +L     I G +G  +D 
Sbjct: 32  NPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTD-KCIIGSSGMQSDI 90

Query: 69  FTLLERLEKKLEQY--PNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLV 120
            TL   L+KK+E +   +        +A+   +  Y R               + +  ++
Sbjct: 91  KTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDSKGVL 150

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----------SAEEIARKAMSIA 169
                     E     +GSG +  L      M  +N              +  + A++ A
Sbjct: 151 YNYDAIGSYCEATHSCVGSGSALILPILDNRMEQKNQLIKNLNFNLRDDLDFVKDAITSA 210

Query: 170 ADICVYTNHNIVLETLK 186
            +  +YT  +  +  + 
Sbjct: 211 TERDIYTGDSTEIYIID 227


>gi|326382282|ref|ZP_08203974.1| 20S proteasome A and subunit Bs [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199012|gb|EGD56194.1| 20S proteasome A and subunit Bs [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 285

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 21/185 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+ V   G V++AGD + ++G  +   + +KV    +    AG AG++  A  ++ 
Sbjct: 49  HGTTIVAVGYPGGVILAGDRRATMGNLIATRDVQKVYVTDEFTA-AGIAGTAGIAIEMVR 107

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM--------- 124
               +LE Y            K  R+   +R+     +     + L++            
Sbjct: 108 LFAVELEHYEKIEGVPLTLDGKVARLATMVRSNLGAAMQGLAAVPLLVGFDAEGDPDDRG 167

Query: 125 --------GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADIC 173
                   G   E   G  AIGSG  +A S+ + L         A   A +A+  AAD  
Sbjct: 168 RIFSFDVAGSRHEETAGYDAIGSGSVFAKSSLKKLYRGDLTAAEALATAVEALYDAADDD 227

Query: 174 VYTNH 178
             T  
Sbjct: 228 SATGG 232


>gi|119638448|gb|ABL85039.1| proteasome [Brachypodium sylvaticum]
          Length = 242

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+A D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 21  GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQLTDNVYVC-RSGSAADTQVISDY 79

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L Q+  Q  + +        +     +    L+A +++          + +     
Sbjct: 80  VRYFLHQHTIQSGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGG 139

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG SY             +   AE+   K +S+A      +   +   T
Sbjct: 140 TILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDGASGGVVRTVT 199

Query: 185 LKVG 188
           +   
Sbjct: 200 INAE 203


>gi|326678924|ref|XP_002667581.2| PREDICTED: protein sel-1 homolog 3-like, partial [Danio rerio]
          Length = 623

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 65/179 (36%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G V+ A D + S    V    + KV  +    +    +G+SAD      
Sbjct: 20  HGTTTLGFAFQGGVIAAADTRSSCAGKVACPASPKVLPIHSHLV-GTTSGTSADCALWKR 78

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L ++L  Y  +  R          +   L   +   L         D     V+    D
Sbjct: 79  ILARELRLYQLRHRRRLSTGGAAKLLSHMLHPFKGTELCVAATLCGWDGGGPRVVYVCSD 138

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
            L  +  + ++GSG  YA S     +    S   A  +AR+A+  A     Y+ +N+ L
Sbjct: 139 GLRLQGALFSVGSGSPYAYSILDGGVRWGMSAQEAAAVAREAVYRATYRDAYSGNNVDL 197


>gi|51036691|ref|NP_001003660.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Xenopus (Silurana)
           tropicalis]
 gi|37781212|gb|AAP36732.1| proteasome beta subunit [Xenopus (Silurana) tropicalis]
          Length = 215

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 11/198 (5%)

Query: 1   MVVMGDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
           M V  + + + ++   TTI+ V  DG VV+  D +VS G  V+     K+  + +    A
Sbjct: 1   MPVSSNPYMSCEVSTGTTIIAVEFDGGVVVGSDSRVSAGDAVVNRVFNKLAPVHQRIYCA 60

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA-- 113
             +GS+ADA  + +     +E +  ++    + LA          KY   + A +++A  
Sbjct: 61  -LSGSAADAQAVADMAHYHMEVHSVEMEAPPLVLAAANLIKGISYKYKEEIVAHLIVAGW 119

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAA 170
           D      + G    +         GSG +Y      +      S EE    A +A+S+A 
Sbjct: 120 DSKNGGQVYGTLGGMITRQPFAIGGSGSTYIYGFVDSTFKPGMSREECEKFAVQALSLAT 179

Query: 171 DICVYTNHNIVLETLKVG 188
           +    +   I L T+   
Sbjct: 180 ERDGSSGGVIYLVTVTKE 197


>gi|325181392|emb|CCA15808.1| proteasome subunit beta type6 putative [Albugo laibachii Nc14]
          Length = 216

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 60/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V+ DG VV+  D + S G  V    + K+  L         +GS+AD   L + 
Sbjct: 18  GTSIIAVKFDGGVVLGADSRTSTGAYVANRVSDKLTGLHDRIYCC-RSGSAADTQALSDY 76

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDV 127
           +   L  +   + +                     L A I++A         V +     
Sbjct: 77  VRYFLSSHSLDVGKLPKVHTAANLFRSLCYNNKDRLLAGIIVAGWDPVHGGQVYSIPIGG 136

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + EE     +K ++ A      +   I   T
Sbjct: 137 AMVKQNFAIGGSGSTYIYGLVDAAYRPDMTQEECQAFVKKMLAHAMARDGSSGGVIRTVT 196

Query: 185 LKVG 188
           +   
Sbjct: 197 ITKD 200


>gi|145508045|ref|XP_001439972.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407178|emb|CAK72575.1| unnamed protein product [Paramecium tetraurelia]
          Length = 268

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 12/176 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       +++A D + S+G  +     RKV  + +  ++   AG +AD    L 
Sbjct: 56  HGTTTLGFVFKEGILLAVDSRASMGSFLSSEQVRKVIEINEY-LLGTMAGGAADCQYWLA 114

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRM------DKYLRNLEAMILIA-DKTITLVITGMGD 126
            L      Y  +        A    +       K        ++   D +   +     D
Sbjct: 115 YLANHCRTYELKNGSKLSVAAASKFLQGILIGYKNSGLSMGCMIAGTDLSGQHLYYIDND 174

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
            +  +  + ++GSG +YA     +L      A E+  +A+  A      +   + +
Sbjct: 175 GMRLKGDIFSVGSGSTYAYDMILSLT----EAVELGVRAIYHATHRDTASGGVVRV 226


>gi|315426587|dbj|BAJ48216.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 187

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 13/184 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ ++    VV+A D + S G  +     +K+ ++     IA  AG  +DA  L+  +
Sbjct: 2   TTIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIA-VAGLLSDAVYLVNVV 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVITGMGD 126
             + +    +             +     +     +           D     V +    
Sbjct: 61  RAERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEGPHVFSSDMS 120

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                   ++ GSG   A     +L +       A  IA KA+  A      + + + + 
Sbjct: 121 GSMVAEEFVSSGSGSPVAYGVLESLYTPGLKLEEARAIAVKAVEAAMQRDPGSGNGVDVL 180

Query: 184 TLKV 187
            ++V
Sbjct: 181 AIQV 184


>gi|323456588|gb|EGB12455.1| hypothetical protein AURANDRAFT_20025 [Aureococcus anophagefferens]
          Length = 197

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 59/177 (33%), Gaps = 8/177 (4%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            H TT +  R DG  +   D + SLG  V   +  K   +     +   AGS+ D    L
Sbjct: 2   YHGTTTVAFRFDGGTMCCVDSRASLGNFVGSYSTEKAIPV-SRTTLGTMAGSAGDCTYWL 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL----VITGMGDVL 128
             L    +    +             +   L   +  + ++  T+      +        
Sbjct: 61  RLLSATSKLAELETGFPPSARRNAEYLAGLLSRQDKNLDLSVGTMMFDDATLTYADNSGA 120

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                + A+GSG  YA S   A          A ++A KA+  AA    Y+   + +
Sbjct: 121 CLAGHLFAVGSGSPYAYSVLDAGYRADLNVDEAADLAEKAVRTAAARDAYSGGIVNV 177


>gi|221056989|ref|XP_002259632.1| Proteasome subunit beta type [Plasmodium knowlesi strain H]
 gi|193809704|emb|CAQ40406.1| Proteasome subunit beta type, putative [Plasmodium knowlesi strain
           H]
          Length = 241

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 20/197 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T++ V     V++A D ++SL  ++      K+ +L     I G +G  +D 
Sbjct: 32  NPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRYCPKISKLTD-KCIIGSSGMQSDI 90

Query: 69  FTLLERLEKKLEQYPNQLL--RSSVELAKDWRMDKYLRNLEAMILIA------DKTITLV 120
            TL   L+KK+E +  +         +A+   +  Y R               +    ++
Sbjct: 91  KTLHSLLKKKIELFVLEHGHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDNKGVL 150

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----------SAEEIARKAMSIA 169
                     E     +GSG +         M  +N              +  + A++ A
Sbjct: 151 YNYDAIGSYCEATHSCVGSGAALIFPILDNRMEQKNQLIKNLNFNLRDDIDFVKDAITSA 210

Query: 170 ADICVYTNHNIVLETLK 186
            +  +YT     +  + 
Sbjct: 211 TERDIYTGDQTEIYIID 227


>gi|66271071|gb|AAY43812.1| beta1 proteasome-1D [Aegilops tauschii]
          Length = 244

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+A D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 23  GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQLTDNVYVC-RSGSAADTQVISDY 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L Q+  QL + +        +     +    L+A +++          + +     
Sbjct: 82  VRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGG 141

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG SY             +   AE+   K +S+A      +   +   T
Sbjct: 142 TILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDGASGGVVRTVT 201

Query: 185 L 185
           +
Sbjct: 202 I 202


>gi|17508499|ref|NP_493558.1| Proteasome Beta Subunit family member (pbs-5) [Caenorhabditis
           elegans]
 gi|3924797|emb|CAB04567.1| C. elegans protein K05C4.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 284

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 64/200 (32%), Gaps = 19/200 (9%)

Query: 9   YAVKMH-ATTILTVRK-------DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
            +++    TT L            G +++A D + S G+ +   +  K+  +G   + A 
Sbjct: 57  KSMQFRKGTTTLAFVYEPATPADKGGIIVAVDSRASSGEYISSKSVMKILDIGDRMV-AT 115

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIA 113
            AG +AD       + K    Y  +   S    A        L            M+   
Sbjct: 116 MAGGAADCQFWTRIVAKYCTLYELREKTSITVSAASKYFANTLYGYRGQGLSVGSMVAGY 175

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
           DK    +     +    +  V ++GSG   A          + +   A ++  +A+  A 
Sbjct: 176 DKKGPQIFKVDSEGDRCQLKVCSVGSGSLNAYGILDNHYKPKMTDDEARKLGLRAIMHAT 235

Query: 171 DICVYTNHNIVLETLKVGDE 190
                +     L  +   ++
Sbjct: 236 YRDSGSGGVCNLCHITPTEK 255


>gi|315425045|dbj|BAJ46718.1| proteasome endopeptidase complex [Candidatus Caldiarchaeum
           subterraneum]
          Length = 187

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 13/182 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ ++    VV+A D + S G  +     +K+ ++     IA  AG  +DA  L+  +
Sbjct: 2   TTIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIA-VAGLLSDAVYLVNVV 60

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVITGMGD 126
             + +    +             +     +     +           D     V +    
Sbjct: 61  RAERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEGPHVFSSDMS 120

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                   ++ GSG   A     +L +       A  IA KA+  A      + + + + 
Sbjct: 121 GSMVAEEFVSSGSGSPVAYGVLESLYTPGLKLEEARAIAVKAVEAAMQRDPGSGNGVDVL 180

Query: 184 TL 185
            +
Sbjct: 181 AI 182


>gi|320101460|ref|YP_004177052.1| proteasome endopeptidase complex, beta component [Desulfurococcus
           mucosus DSM 2162]
 gi|319753812|gb|ADV65570.1| proteasome endopeptidase complex, beta component [Desulfurococcus
           mucosus DSM 2162]
          Length = 208

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 12/181 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D + + G  V     +K+ R+     +   +G  ADA  ++E  
Sbjct: 8   TTTVGLVVGDYVVLAADKRATAGPMVYHKAVKKISRITDYAAL-TISGLVADAQYIVEYA 66

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMD-------KYLRNLEAMILIA-DKTITLVITGMGDV 127
                 Y  +  +     A   R+        +Y+  +  ++L   D T   +       
Sbjct: 67  RFLARDYEAETGKPISVGALASRISLVLSVYLRYVPFIVQLLLGGRDHTGASLYYMDLYG 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
                  MA GSG   A         +  S EE   +A KA+S A     +T   + +  
Sbjct: 127 SVTREKYMATGSGSPVAFGVLEQGYRSDLSLEEAKALAFKAVSSAIMRDGFTGEGVDVVV 186

Query: 185 L 185
           +
Sbjct: 187 I 187


>gi|18859269|ref|NP_571751.1| proteasome beta 11 subunit [Danio rerio]
 gi|5833455|gb|AAD53516.1|AF155576_1 proteasome subunit beta 11 [Danio rerio]
 gi|29561857|emb|CAD87790.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
           rerio]
 gi|49903219|gb|AAH76475.1| Psmb11 protein [Danio rerio]
 gi|94732366|emb|CAK04957.1| proteasome (prosome, macropain) subunit, beta type, 11 [Danio
           rerio]
 gi|182889396|gb|AAI65038.1| Psmb11 protein [Danio rerio]
          Length = 217

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 67/198 (33%), Gaps = 17/198 (8%)

Query: 5   GDKHYAVK-----MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNII 58
            D+H+           TTIL V+ +G V+I  D + S+G   V      K+ ++      
Sbjct: 1   MDRHHPYSQVNGVSTGTTILAVKFNGGVIIGSDSRASMGESYVSSKTINKLIQVHDRIFC 60

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIAD 114
              AGS ADA  + +  + +L  +  Q+    +  A    M          L A  + A 
Sbjct: 61  C-IAGSLADAQAVTKMAKFQLSFHSIQMESPPLVKAAASIMRELCYSNKEELRAGFITAG 119

Query: 115 KTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSI 168
                   +       +         GSG +Y      A      + EE  +    A+++
Sbjct: 120 WDRKKGPQIYVVSLGGMLLSQPFTIGGSGSTYIYGYVDAKFKPDMTLEEATQFSTNALAL 179

Query: 169 AADICVYTNHNIVLETLK 186
           A      +   + L  + 
Sbjct: 180 AMGRDNVSGGVVHLVVIT 197


>gi|72389907|ref|XP_845248.1| proteasome beta-1 subunit [Trypanosoma brucei TREU927]
 gi|4218582|emb|CAA10283.1| proteasome beta-1 subunit [Trypanosoma brucei rhodesiense]
 gi|62359956|gb|AAX80381.1| proteasome beta-1 subunit, putative [Trypanosoma brucei]
 gi|70801783|gb|AAZ11689.1| proteasome beta-1 subunit, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|261328641|emb|CBH11619.1| proteasome beta-1 subunit, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 282

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 55/169 (32%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VV+A D + S G  V+   + K+ +L K       +GS+AD   L E+
Sbjct: 54  GTTIMAVSYKDGVVLAADSRTSTGAYVVNRASNKLTKLAKRIYCC-RSGSAADTQALAEQ 112

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN-- 132
               LE Y   + +            K     +  I              G V       
Sbjct: 113 TANYLESYETDISQPVNVATAANIFKKLCYMNKWNITAGIIVAGYDPLNGGSVYSIPTGG 172

Query: 133 -----GVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
                     GSG  +  S   A      + EE  R   +A++ A    
Sbjct: 173 ACVKLDYALGGSGSVFLYSFFDANYKPGMTKEECIRFCQRAVAHAYSRD 221


>gi|209733156|gb|ACI67447.1| Proteasome subunit beta type-6 precursor [Salmo salar]
          Length = 217

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 65/185 (35%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTILTV  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 16  GTTILTVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + ++  +  Q+    +  A               L+A  + A         V T    
Sbjct: 75  AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +         GSG +Y    A A      S EE    A+ A+++A      T     L 
Sbjct: 135 GMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVTGGVAHLV 194

Query: 184 TLKVG 188
            +   
Sbjct: 195 VITEE 199


>gi|68532157|gb|AAY98813.1| proteasome subunit 10 [Sus scrofa]
 gi|68532159|gb|AAY98814.1| proteasome subunit 10 [Sus scrofa]
          Length = 273

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +ADA      
Sbjct: 39  GTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADAEMTTRM 97

Query: 75  LEKKLEQYPNQLLR----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
               +E +     R    ++V      ++ +Y  ++ A +++   D T   + +      
Sbjct: 98  AASNIELHALSTGREPRVATVTRMLRQKLFRYQGHVGASLIVGGVDFTGPQLYSVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAIT--AGILSDLGSGGNVDAC 215

Query: 184 TL 185
            +
Sbjct: 216 VI 217


>gi|66271073|gb|AAY43813.1| beta1 proteasome-7D [Aegilops tauschii]
 gi|66271075|gb|AAY43814.1| beta1 proteasome-7D [Aegilops tauschii]
          Length = 246

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V   G VV+A D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 25  GTTIVGVCYAGGVVLAADSRTSTGMYVANRASDKISQLTDNVYVC-RSGSAADTQVISDY 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L Q+  QL + +        +     +    L+A +++          + +     
Sbjct: 84  VRYFLHQHTIQLGQPATVKVASNLVRLLAYQNKSMLQAGMIVGGWDKYEGGQIYSVPLGG 143

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG SY             +   AE+   K +S+A      +   +   T
Sbjct: 144 TILRQPFAIGGSGSSYLYGLMDHEWKEGMTQEEAEKFVVKVVSLAIARDGASGGVVRTVT 203

Query: 185 LKVG 188
           +   
Sbjct: 204 INEE 207


>gi|330791448|ref|XP_003283805.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
 gi|325086304|gb|EGC39696.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
          Length = 236

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 23/204 (11%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSS 65
           +  A   +  T++ V      VIAGD ++S G   +   +  KV +L    ++A  +G  
Sbjct: 22  RFEAYVDNGGTVMAVAGKDYCVIAGDTRMSDGGYGIQTRHYTKVFQLTNKCVLAT-SGMQ 80

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTI 117
           AD   L +RL+  LE Y  +  +     A    +   L                  +K  
Sbjct: 81  ADTIALQKRLKLMLETYQKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDEKGE 140

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNSAEEI---ARK 164
             + T             + GSG    +      +          +   S +++    + 
Sbjct: 141 GWIWTYDAVGSHERVKYSSQGSGNQLVIPLLDNQVAKRNQQIIQGNGDVSCDQVVSFVKD 200

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
           A++ A +  +YT     +  +   
Sbjct: 201 AITSAGERDIYTGDFADIVVVDKD 224


>gi|194769458|ref|XP_001966821.1| GF19078 [Drosophila ananassae]
 gi|190618342|gb|EDV33866.1| GF19078 [Drosophila ananassae]
          Length = 569

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 62/193 (32%), Gaps = 11/193 (5%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           + H       TTI+ +     VV+  D + S G  V    + K+  +         +GS+
Sbjct: 7   EYHDIPVSTGTTIMALEYAHGVVLGADSRTSAGSYVANRASDKLTEVADRIYCC-RSGSA 65

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIA---DKTIT 118
           AD   + + +   L  +  Q  R                 Y  NL A I++A   DK   
Sbjct: 66  ADTQAVADLVSHSLNYHQYQFGRPPTVWEAACDFRHLCYTYRNNLLAGIIVAGYDDKKGG 125

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVY 175
            V +     +         GSG SY             S E+     RK + +A      
Sbjct: 126 QVYSIPLGGMLVREPCTIGGSGSSYIFGYVHDQYRPDFSKEQCVAFIRKCIQLAIHHDGS 185

Query: 176 TNHNIVLETLKVG 188
           +   I +  +   
Sbjct: 186 SGGVIRIAIITAD 198


>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
           13514]
 gi|302595720|sp|A4WMZ0|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
           13514]
          Length = 203

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 68/182 (37%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
             T + ++    VV+A + +VS G   + +  RKV  +     IA  AG  AD  +L   
Sbjct: 8   GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGRKVFVIDDKLAIA-SAGIIADMQSLARI 66

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDV 127
            ++  K  +   +   +   +AK   +  + R              D+  + +I      
Sbjct: 67  VKINAKAYELETRKKPTVRSMAKLLSVIMFSRRYMPFFAEVLVGGVDEEGSHLIVMDPLG 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLET 184
              E+   A+G+G   A+S              A+++A KA+  A +    +   I L  
Sbjct: 127 SLIEDNYAALGTGAKLAISVLDTGYREDITLQDAKKLAVKALKAAIERDPVSGGGIDLVL 186

Query: 185 LK 186
           + 
Sbjct: 187 ID 188


>gi|169625204|ref|XP_001806006.1| hypothetical protein SNOG_15869 [Phaeosphaeria nodorum SN15]
 gi|160705619|gb|EAT76707.2| hypothetical protein SNOG_15869 [Phaeosphaeria nodorum SN15]
          Length = 227

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 53/188 (28%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
            + +  +K+ H TT L  R  G +++A D + + G  +     +KV  +    ++   AG
Sbjct: 57  SNPNCPIKIAHGTTTLAFRFKGGIIVATDSRATAGNWIASQTVKKVIEI-NNCLLGTMAG 115

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
            +A                                                     +   
Sbjct: 116 GAAVQ------------------------------------------------GPALYYI 127

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNI 180
             D       +  +GSG ++A     A          A E+ R+++  A     Y+   I
Sbjct: 128 DSDGTRLSGNLFCVGSGQTFAYGVLDAEYKYDLEDDDALELGRRSILAATHRDAYSGGFI 187

Query: 181 VLETLKVG 188
            L  +K  
Sbjct: 188 NLYHVKED 195


>gi|126644014|ref|XP_001388169.1| proteasome subunit beta type 1 [Cryptosporidium parvum Iowa II]
 gi|126117246|gb|EAZ51346.1| proteasome subunit beta type 1, putative [Cryptosporidium parvum
           Iowa II]
          Length = 246

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 17/199 (8%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                   +  + + V  D  VVIA D ++S    +   +  K  +L    I+A     +
Sbjct: 35  HSFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLA 94

Query: 66  ADAFTLLERL-EKKLEQYPNQLLRSSVELAK---DWRMDKYLRNLEAMILIADKTITL-- 119
                    L + KL ++ +    S   +A+        K      +  L++        
Sbjct: 95  DINALRKTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDEQGKG 154

Query: 120 -VITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAE--------EIARKAMSI 168
            V          ++  +A+GSGGS   S     +  + Q S E         I + +++ 
Sbjct: 155 VVYGYDAVGSFDQHKFVALGSGGSLITSILDNQISGNNQTSFESIDKVGIINIVKDSITS 214

Query: 169 AADICVYTNHNIVLETLKV 187
           A++  V+T  +  +  +  
Sbjct: 215 ASERDVHTGDSAEVIVIDS 233


>gi|113205704|ref|NP_001038030.1| proteasome subunit beta type-10 [Sus scrofa]
 gi|90823108|gb|ABE01081.1| proteasome beta 10 subunit [Sus scrofa]
          Length = 273

 Score = 98.5 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +ADA      
Sbjct: 39  GTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADAEMTTRM 97

Query: 75  LEKKLEQYPNQLLR----SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
               +E +     R    ++V      ++ +Y  ++ A +++   D T   + +      
Sbjct: 98  AASNIELHALSTGREPRVATVTRMLRQKLFRYQGHVGASLIVGGIDFTGPQLYSVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +  N+   
Sbjct: 158 YSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAIT--AGILSDLGSGGNVDAC 215

Query: 184 TL 185
            +
Sbjct: 216 VI 217


>gi|52547782|gb|AAU81926.1| multicatalytic endopeptidase complex-like 1 [Marmota monax]
          Length = 248

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA      
Sbjct: 21  GTTIAGLVFRDGVILGADTRATNDSVVADKNCEKIHFIAPKIYCCG-AGVAADAEMTTRM 79

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
               +E +     R          + + L   +  +         D T   +        
Sbjct: 80  AASNMELHAMSTGREPRVATVTRLLRQTLFRYQGHVGASLIVGGVDLTGPQLYGVHPHGS 139

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E    +  +A++  A I   + +  ++   
Sbjct: 140 YSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAIT--AGILGDLGSGGSVDAC 197

Query: 184 TLKV 187
            +  
Sbjct: 198 VITA 201


>gi|162606150|ref|XP_001713590.1| 26S proteasome SU B5 [Guillardia theta]
 gi|13794510|gb|AAK39885.1|AF165818_93 26S proteasome SU B5 [Guillardia theta]
          Length = 205

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 11/176 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L     G ++++ D + S+G  V  +  RK+  +    ++   AG +AD F   
Sbjct: 9   LHGTTTLAFIFRGGIIVSVDSRASMGSYVGSSKVRKILEISNN-LLGTMAGGAADCFFWE 67

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-------EAMILIADKTITLVITGMG 125
             L    + +  +  +          +   + N          MIL  DK    +     
Sbjct: 68  RNLSSLCKIFEIRNNQKLSVAGSSKVLMSMISNYKNAGLSMGTMILGWDKNGPNIYYVDS 127

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAADICVYTNH 178
           +    +  ++++GSG  +A S   +  +     N A ++ R A+  AA    Y+  
Sbjct: 128 EGSRIKIKIISVGSGCLFAYSILDSGYNWFTRINEAIDLGRNAIVQAALNDPYSGG 183


>gi|195376901|ref|XP_002047231.1| GJ13326 [Drosophila virilis]
 gi|194154389|gb|EDW69573.1| GJ13326 [Drosophila virilis]
          Length = 328

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 80/192 (41%), Gaps = 12/192 (6%)

Query: 8   HYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           H  +  +  TT++ +  +  V+I  D + +    V  A + K+RRL       G +G ++
Sbjct: 34  HPPLPFNSGTTVVGLHFNKGVMIGTDTRATRRNIVSSAESPKIRRLHNNIYCGG-SGYAS 92

Query: 67  DAFTLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA-DKTITL 119
           D   L + LEK+LE +   + +       + +L K+  M    R + + ++   DK+   
Sbjct: 93  DLDNLTQLLEKQLELHYKSINQRHVPVVCAKQLTKEALMQNLGRIMVSFVIGGVDKSGVH 152

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYT 176
           + +   D    +    ++GSG   A+            ++ A E+   A++   +  + +
Sbjct: 153 LYSVHFDGTSEKCLYNSVGSGQFGAMGILEDRWQLGLEEDDARELMVDAVTAGINNDLAS 212

Query: 177 NHNIVLETLKVG 188
              + L  ++  
Sbjct: 213 GTGVDLCIIRTD 224


>gi|73957470|ref|XP_546869.2| PREDICTED: similar to proteasome beta 10 subunit proprotein [Canis
           familiaris]
          Length = 305

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 17/187 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN---II-AGFAGSSADAFT 70
            TTI  +     V++  D + +    VM  N  K+  +       ++    AG +ADA  
Sbjct: 66  GTTIAGLVFRDGVILGADTRATNDSVVMDKNCEKIHFIAPNEPPLVLSCCGAGVAADAEM 125

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGM 124
                   +E +     R          + + L           ++   D +   + +  
Sbjct: 126 TTRMAASNMELHSLSTGREPRVTTVTRLLRQTLFRYRGHVGASLLVGGVDFSGPQLYSVH 185

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--CVYTNHN 179
                      A+GSG   AL+          +   A+E+  +A++  A I   + +  +
Sbjct: 186 PHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQELLVEAIT--AGILGDLGSGGS 243

Query: 180 IVLETLK 186
           +    + 
Sbjct: 244 VDACVIT 250


>gi|196007810|ref|XP_002113771.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190584175|gb|EDV24245.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 229

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 66/186 (35%), Gaps = 11/186 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  TTI+ V  DG VVI  D + + G  V+     K+ R+         +GS+AD   + 
Sbjct: 27  MTGTTIMAVEYDGGVVIGADSRTTSGSYVVNRVTDKLTRISDSIYCC-RSGSAADTQAIA 85

Query: 73  ERLEKKLEQYPNQL-LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP- 130
           + +   L  +  +L     VE A     D   R  ++M+            G    + P 
Sbjct: 86  DIVAYSLNFHKMELDEEPLVETASSIFRDMCYRYRDSMVAGIICAGWDCFKGGQVYVIPL 145

Query: 131 -----ENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVL 182
                       GSG +Y      A      S  E     ++A+++A      +   I L
Sbjct: 146 GGMCVRRPFTIGGSGSTYIYGYCDAHYKPNMSKNECLDFVKQAVALAMSRDGSSGGVIRL 205

Query: 183 ETLKVG 188
            ++   
Sbjct: 206 ASIDKD 211


>gi|291390357|ref|XP_002711673.1| PREDICTED: proteasome beta 10 subunit [Oryctolagus cuniculus]
          Length = 273

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 14/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   + +K+  +       G AG +AD       
Sbjct: 39  GTTIAGLVFRDGVILGADTRATNDSVVADKSCQKIHFIAPNIYCCG-AGVAADTEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
               +E +     R          + + L      +         D     +        
Sbjct: 98  AASNMELHSLATGREPRVATVTRVLRQTLFRYRGHVGASLIVGGVDLHGPQLYGVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM---SIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+          + E  A +++   +I A I   + +  ++   
Sbjct: 158 FSRLPFTALGSGQDAALAVLEDRFQPNMTLE--AAQSLLVEAITAGILGDLGSGGSVDAC 215

Query: 184 TLKV 187
            +  
Sbjct: 216 VITR 219


>gi|307106214|gb|EFN54460.1| hypothetical protein CHLNCDRAFT_31571 [Chlorella variabilis]
          Length = 225

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ V  DG VV+  D +VS G  +    + K+  L     +   +GS+AD   + + 
Sbjct: 17  GTTVVAVCFDGGVVVGADSRVSTGTYISNRASDKITPLADNVYLL-RSGSAADTQAVADY 75

Query: 75  LEKKLEQYPNQLLRS--SVELAKDWRMDKYLRNLEAMILI---ADKTITLVITGMG-DVL 128
           +    EQ+  QL R+     +A+  R   Y        +I    D+     + G      
Sbjct: 76  VRYFTEQHEMQLQRTPGVRTVAQLVREMNYQYKHLVGAMIVAGWDEDEGGQVYGCPIGGT 135

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETL 185
                    GSG ++      +          AE++   A+++A      +   I L T+
Sbjct: 136 ISREPWTTDGSGSTFIWGFLDSEFKDGMGRQDAEDLVAMALALAMSRDGSSGGVIRLVTV 195

Query: 186 KVG 188
              
Sbjct: 196 SKE 198


>gi|316976433|gb|EFV59730.1| proteasome subunit beta type-6 [Trichinella spiralis]
          Length = 558

 Score = 98.5 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 13/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++    +  V+IA D + S G  V+   + K+  + +  I    +GSSAD   + + 
Sbjct: 357 GTTLVACEFEHGVIIAADTRTSSGSLVVSRVSNKISPVSEY-ICCMRSGSSADTQAVADI 415

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE----- 129
            + ++  Y  +   S                     + A   +    +  G  +      
Sbjct: 416 AKYQISVYEMEHKCSIPVSIAAEIFRSICYRYR-NDITAGIIVCGWDSVNGGQIYSIPIS 474

Query: 130 ---PENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
               +    A GSG  YA+           + EE     RKA++IA      +   I L 
Sbjct: 475 GMIMKQCWTAGGSGSVYAIGYLDTNFKPNMTEEEANNFIRKALAIAISRDGSSGGCIRLC 534

Query: 184 TLKVG 188
           ++   
Sbjct: 535 SITEK 539


>gi|17225016|gb|AAL37206.1|AF321444_1 low molecular weight polypeptide LMP7 [Paralichthys olivaceus]
          Length = 273

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 65/177 (36%), Gaps = 9/177 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G+ +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFKHGVIVAVDSRASAGRYLSSNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR------MDKYLRNLEAMILIADKTITLV--ITGMG 125
            L K+   Y  +        A          + ++  ++ +MI   DK          MG
Sbjct: 129 LLAKECRLYRLRNNHRISVAAAPSCCQHDAGLQRHGLSMGSMICGWDKEGPGCTMWMIMG 188

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
            V +P   + A G+    A             A E+ R+ ++ A     Y+   + +
Sbjct: 189 RVCQPACSLPAAGTRTPMAWWQRLQGRHAVEEAYELGRRGITHATHRDAYSGGVVNM 245


>gi|256075409|ref|XP_002574012.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
 gi|238659204|emb|CAZ30245.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
          Length = 212

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 20/201 (9%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSS 65
                  +  T++ +  +   +IA D ++  G  V+   N+ ++ +LG GNI+ G AG  
Sbjct: 1   MFNPYSSNGGTVMGIAGNDFSLIASDTRLCDGDFVILSRNSPRLFKLGPGNIL-GCAGFH 59

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA-----DKTIT 118
            D  TL + LE K++ +     ++    A    +    Y R      +       D+   
Sbjct: 60  GDVLTLTKLLENKVKTFRYDHGKNISTKALAGLLSVTLYNRRFFPFYVSNVLVGLDEGRG 119

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAAR-------ALMS----TQNSAEEIARKAMS 167
           ++ +          G  A GS  +              +        + +A ++      
Sbjct: 120 VLYSYDPVGSYESEGYRASGSSSAILQPFLDSTVGNKTSKYHVSRLDKETAVKLTHDIFI 179

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  +    ++++ T+   
Sbjct: 180 SAAERDIQCGDSVIICTITKD 200


>gi|303391190|ref|XP_003073825.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
           50506]
 gi|303302973|gb|ADM12465.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
           50506]
          Length = 202

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 8/189 (4%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                +M  TTI+ ++ D  V+I  D + S+G  +      K+  +     +   +GSSA
Sbjct: 1   MFNKKEMTGTTIIAIKYDDGVLIGADSRTSMGAYIPSRVTDKLTPITNNIFVC-RSGSSA 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL----EAMILIADKTITLVIT 122
           D   + E L+  L  Y +      +         K +         +I+        +  
Sbjct: 60  DTQMISEYLKMYLTLYSHLESSIPLVQRAATLASKIIYENPSLLAGLIVAGYDDKPRIFN 119

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                   E      GSG ++             S EE     + A+S A +    +   
Sbjct: 120 ISLGGTLVECDWAIGGSGSAFIYGYCDVNWKNGMSLEEGIGFIKNAVSCAINRDNASGGC 179

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 180 IRMSAISRN 188


>gi|281210614|gb|EFA84780.1| proteasome subunit beta type 1 [Polysphondylium pallidum PN500]
          Length = 235

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 69/201 (34%), Gaps = 23/201 (11%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSS 65
           +      +  T+L +      VIAGD ++S G   +      K+ +L    +IA  +G  
Sbjct: 21  RFEPYVDNGGTVLAIAGSDYCVIAGDTRMSDGGYGIQTRQYTKIFQLTNKCVIAT-SGMQ 79

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKT-I 117
           AD   L +RLE  L +Y  +  +     A    +   L                 D+  +
Sbjct: 80  ADTLALRKRLETVLSRYQKEHGKPMSTPAISQYLSNTLYQKRFFPYYTFNLVCGVDEDGV 139

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST----------QNSAEE---IARK 164
             + T           + + GSG           +            + S+E+   +A+ 
Sbjct: 140 GCIWTYDAVGSHERVKMSSQGSGNQLVQPLLDNQVGKFNQRIVDGPRELSSEQAVSLAKD 199

Query: 165 AMSIAADICVYTNHNIVLETL 185
           A++ A +  +YT     +  +
Sbjct: 200 AITSAGERDIYTGDFADIVVI 220


>gi|225711612|gb|ACO11652.1| Proteasome subunit beta type-1 precursor [Caligus rogercresseyi]
          Length = 238

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 60/202 (29%), Gaps = 21/202 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                + +  T + +     VVIA D +++    ++  N  K+  LG G ++ G  G   
Sbjct: 26  SFQPYQDNGGTTVGIAGSDFVVIASDTRLASSYDILSRNVPKIFELGSGCVL-GSCGCWC 84

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTIT 118
           D  T +   E KL+ Y     +     A    +   L                   K   
Sbjct: 85  DVLTFIRVAESKLKDYHYTHGKELNTPALAQMLSNTLYRRRFFPYYIHNVLAGLDEKGQG 144

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---------TQNSAEE---IARKAM 166
           ++ T        +  +   G+           ++             S +E   I     
Sbjct: 145 VIYTYDPVGHCEKVKMSCGGTSMELIQPILDNIVEKKNMTNGTMKDLSIDETVNIIHDCF 204

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  + T   I+ + +   
Sbjct: 205 ISAAERQIQTGDGIMFKIITKE 226


>gi|156617988|gb|ABU87864.1| proteasome subunit beta type 9 protein [Clupea pallasii]
          Length = 217

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 10/168 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G +V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIGIEYDGGVVLGSDSRVSAGASVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEI 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  +L   S+  +          KY   L A +++A  D+     +      L
Sbjct: 77  VNYQLDVHSVELGEDSLVRSAATLVKNISYKYKEELSAHLIVAGWDRKKKGQVYVTMSGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
                    GSG SY      A      S  E       A+++A    
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKDMSRRECQEFVVNALTLAMGRD 184


>gi|37781216|gb|AAP36733.1| proteasome beta subunit [Xenopus (Silurana) tropicalis]
 gi|165970624|gb|AAI58548.1| Unknown (protein for MGC:186705) [Xenopus (Silurana) tropicalis]
          Length = 215

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  + +    A  +GS+ADA  + + 
Sbjct: 16  GTTIIAVEFDGGVVVGSDSRVSAGDAVVNRVFNKLAPVHQRIYCA-LSGSAADAQAVADM 74

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
               +E +  ++  S + LA          KY   + A +++A  D      + G    +
Sbjct: 75  AHYHMEVHSIEMEASPLVLAAANLIKGISYKYKEEIAAHLIVAGWDSKNGGQVYGTLGGM 134

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      +      S EE    A +A+S+A +    +   I L T+
Sbjct: 135 ITRQPFAIGGSGSTYIYGFVDSTFKPGMSREECETFAVQALSLAMERDGSSGGVIYLVTV 194

Query: 186 KVG 188
              
Sbjct: 195 TKE 197


>gi|14594921|emb|CAC43321.1| putative beta proteasome subunit [Nicotiana tabacum]
          Length = 205

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 51/148 (34%), Gaps = 7/148 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + + G  V   N  K+  +       G AG++AD   + + 
Sbjct: 40  GTTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDM 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVL 128
           +  +L+ +     R S  +     +  +L + +        +   D T   + T      
Sbjct: 99  VSSQLKLHRFHTGRESRVVTALTLLKTHLFSYQGYVSAALVLGGVDVTGPHLXTIYPHGS 158

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN 156
                   +GS    A++   +      
Sbjct: 159 TDTLPYATMGSSSLAAIAIFESKYREGL 186


>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
           crenarchaeote HF4000_APKG7F19]
          Length = 199

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 8/186 (4%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           A+ M   T + +  D  VV A + +++ G  V+    +K   +      A     +    
Sbjct: 3   AMYMPGATAVGITYDEGVVFASERRIAYGNFVVSKTTKKTFVITPQVGAACAGLVADMQI 62

Query: 70  -TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----LIADKTITLVITGM 124
            +L      K+ +   +       +AK      Y R    ++    +       ++ T  
Sbjct: 63  LSLQISALAKIRKMEIKREVPPNTIAKMMSNMMYERRFFPLLTQVIVGGLVDKPVIYTLD 122

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIV 181
                  +   A+G+G   AL         +     A ++A K++  A      +  NI 
Sbjct: 123 PLGSVLPDDYAAVGTGAEMALGILDQQYKKELNETEATDLAVKSIRAAILRDSASGDNID 182

Query: 182 LETLKV 187
           +  +  
Sbjct: 183 VLVINK 188


>gi|185133585|ref|NP_001117731.1| low molecular mass protein 2 [Oncorhynchus mykiss]
 gi|5823092|gb|AAD53037.1|AF115540_1 low molecular mass protein 2 [Oncorhynchus mykiss]
          Length = 217

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 16  GTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + ++  +  Q+    +  A               L+A  + A         V T    
Sbjct: 75  AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +         GSG +Y    A A      S EE    A  A+++A      +     L 
Sbjct: 135 GMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLV 194

Query: 184 TLKVG 188
            +   
Sbjct: 195 VITEE 199


>gi|225708064|gb|ACO09878.1| Proteasome subunit beta type 6 precursor [Osmerus mordax]
          Length = 231

 Score = 98.1 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 31  GTTIMAVEFDGGVVMGADSRTTTGAYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 89

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L  + +         +        ++               V T     
Sbjct: 90  VTYQLGFHSIELDEAPLVQTAANLFKQMCYRYREELMAGIIVAGWDKRRGGQVYTVPMGG 149

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
           +     V   GSG SY      +   T  + EE      +A+++A +  
Sbjct: 150 MLVRQPVSVGGSGSSYIYGFMDSNYKTGMTKEECLHFTTQALALAMERD 198


>gi|308321308|gb|ADO27806.1| proteasome subunit beta type-9-a like protein [Ictalurus furcatus]
          Length = 214

 Score = 98.1 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 10/169 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ +G V+I  D + S+G + + +         +  I    AGS ADA  +   
Sbjct: 13  GTTIVAVKYNGGVIIGSDSRASIGGSYVSSKVINKLIQVRDRIFCCIAGSLADAQHVTRV 72

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTI---TLVITGMGDV 127
            + +L  +  Q+    +  A    + +   +      A  + A         + T     
Sbjct: 73  AKFQLSFHSIQMGSPPLVKAAATVLKELCYSNREDLQAGFITAGWDKKKGPQMYTVSMGG 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
           +         GSG +Y      A      S EE     + A+++A    
Sbjct: 133 MLISQPFTIGGSGSTYIYGYMDAKYKPDMSREECIQFVKNALALAIGRD 181


>gi|224144619|ref|XP_002187722.1| PREDICTED: similar to Proteasome subunit beta type-6 [Taeniopygia
           guttata]
          Length = 233

 Score = 98.1 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 30  GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCC-RSGSAADTQAVADA 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +  +L  +  +L                  +Y   L A I++A         V       
Sbjct: 89  VAYQLAFHSVELEEPPRVRTAARLFQQSCYRYREELSAGIIVAGWDPRRGGQVYVVPMGG 148

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
           L         GSG SY      A      S    +E   +A+++A      +   I L  
Sbjct: 149 LLLRQPFAVGGSGSSYIYGFLDATFQPGMSRSQCQEFVARALALAMVRDGSSGGVIRLAA 208

Query: 185 LKVG 188
           +   
Sbjct: 209 ITEE 212


>gi|209737734|gb|ACI69736.1| Proteasome subunit beta type-6 precursor [Salmo salar]
          Length = 212

 Score = 98.1 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 11  GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 69

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + ++  +  Q+    +  A               L+A  + A         V T    
Sbjct: 70  AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALG 129

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +         GSG +Y    A A      S EE    A  A+++A      +     L 
Sbjct: 130 GMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLV 189

Query: 184 TLKVG 188
            +   
Sbjct: 190 VITEE 194


>gi|28573221|ref|NP_649515.3| proteasome beta2R2 subunit [Drosophila melanogaster]
 gi|18446895|gb|AAL68040.1| AT05866p [Drosophila melanogaster]
 gi|28381097|gb|AAF52066.3| proteasome beta2R2 subunit [Drosophila melanogaster]
 gi|220949622|gb|ACL87354.1| CG12161-PA [synthetic construct]
 gi|220958464|gb|ACL91775.1| CG12161-PA [synthetic construct]
          Length = 322

 Score = 97.7 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ +  DG V+I  + + + G  V     RK+  L      AG AG++ D   L+E 
Sbjct: 49  GTTVVGIVFDGGVIIGAESRATSGGIVFSKTCRKIIELQANIFAAG-AGTARDTKALVEL 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDW-----RMDKYLRNLEAMILI--ADKTITLVITGMGDV 127
              +LE +        V +          + ++  N++A ++I  AD T   +     D 
Sbjct: 108 TRAQLELHRMNTGFRKVPVCCANQMIRQLLFRFNGNIDADMIIGGADNTGAHLFCTRSDG 167

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADI--CVYTNHNIVLET 184
                   +IGSG   ++S   +  S   S E   A    ++AA +   + +   + L  
Sbjct: 168 STDTAPFTSIGSGYQVSMSILESRWSEDLSEESACALACDAVAAGMKNDLCSGGKVSLCV 227

Query: 185 LKVG 188
           ++  
Sbjct: 228 VRCD 231


>gi|32400975|gb|AAP80693.1| proteasome subunit [Griffithsia japonica]
          Length = 220

 Score = 97.7 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  DG VV+  D + + G  +    + K+  +     +   +GS+AD   + + 
Sbjct: 20  GTSIMAVTFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFVC-RSGSAADTQIISDY 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
               L  +  +L             ++   + + M++ +             V +     
Sbjct: 79  CRYYLSMHHIELGEDPRVETTARLFNQLCYHNKEMLMASIIVGGYDARKGGQVFSIPLGG 138

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              +      GSG SY      A      S +E     + A+S+A      +   I L  
Sbjct: 139 ALIKQPFTIGGSGSSYIYGYCDANFKEGMSKDECIEFVKNALSLAMARDGSSGGVIRLVV 198

Query: 185 LKVG 188
           +   
Sbjct: 199 IDKD 202


>gi|59275970|dbj|BAD89556.1| proteasome subunit [Oncorhynchus mykiss]
          Length = 212

 Score = 97.7 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 11  GTTILAVTFNGGVIIGSDSRASIGGNYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 69

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + ++  +  Q+    +  A               L+A  + A         V T    
Sbjct: 70  AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALG 129

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +         GSG +Y    A A      S EE    A  A+++A      +     L 
Sbjct: 130 GMLLSQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALAMGRDNVSGGVAHLV 189

Query: 184 TLKVG 188
            +   
Sbjct: 190 VITEE 194


>gi|14594933|emb|CAC43327.1| putative beta6 proteasome subunit [Nicotiana tabacum]
          Length = 192

 Score = 97.7 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 25/193 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T + V      VIA D ++S G  ++  +  K+ +L    ++A  +G  AD 
Sbjct: 1   SPYDNNGGTCVAVAGADYCVIAADTRMSSGYNILTRDYSKIIKLADKCVLA-SSGFQADV 59

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
             L + L  +   Y +Q  +     A    +   L         +        ++    V
Sbjct: 60  KALQKVLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCV 119

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------TQNSAEEIARK 164
            T          G  + GSG +  +      +                 +++ A ++ + 
Sbjct: 120 FTYDAVGSYGRVGYSSQGSGSTLIMPFLDYQLKSPSPLLLPAKDAVTPLSESEAIDLVKT 179

Query: 165 AMSIAADICVYTN 177
               A +  +YT 
Sbjct: 180 CFVSATERDIYTG 192


>gi|321473024|gb|EFX83992.1| hypothetical protein DAPPUDRAFT_230628 [Daphnia pulex]
          Length = 230

 Score = 97.7 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 67/199 (33%), Gaps = 21/199 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  TI+ V  +   +IA D ++  G +++     K+ +L +  ++ G +G   D 
Sbjct: 20  SPYTDNGGTIVAVAGEDFAIIASDTRLIQGYSILSREQTKLFKLSEQTVL-GVSGCWCDV 78

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------V 120
            T    LE +++ Y ++ L+     A    +   L +           +          +
Sbjct: 79  LTFTRTLEARMKMYLHEHLKPMSTPAVAQLVSTMLYHKRFFPYYVSNIVAGLDQDGKGTL 138

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARA---------LMSTQNSAEE---IARKAMSI 168
            +        +N   A G+ G+                  +    + E+   + + +   
Sbjct: 139 YSYDPVGHCEKNRYRAGGAAGAMLQPLLDNQVGLKNMKGELLPNITKEKALMVIKDSFIS 198

Query: 169 AADICVYTNHNIVLETLKV 187
           AA+    T   +++  +  
Sbjct: 199 AAERDTSTGDGVIINIITK 217


>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
 gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
          Length = 254

 Score = 97.7 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                    +  TI+ +      +IAGD ++S G  ++  N RKV  +    + A  +G 
Sbjct: 45  DPDFDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAA-SGM 103

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
            AD   LL+ ++ +  +Y  +  +          +   +    +        +  + +  
Sbjct: 104 HADVQRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEG 163

Query: 125 GDVLEPEN--------GVMAIGSGGSYALSAARALMSTQNSAE-------EIARKAMSIA 169
              +   +           + G+G +         + ++N AE       E+ + A    
Sbjct: 164 RGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAILSKNEAEITREFAFELIQSAFRSC 223

Query: 170 ADICVYTNHNIVLETLKVG 188
           A+  +YT  ++V   +   
Sbjct: 224 AERDIYTGDSVVAMCISAD 242


>gi|59275961|dbj|BAD89548.1| proteasome subunit [Oncorhynchus mykiss]
 gi|306494798|gb|ADM95870.1| PSMB9L [Oncorhynchus mykiss]
          Length = 217

 Score = 97.7 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 16  GTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + ++  +  Q+    +  A               L+A  + A         V T    
Sbjct: 75  AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +         GSG +Y    A A      S EE    A  A+++A      +     L 
Sbjct: 135 GMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLV 194

Query: 184 TLKVG 188
            +   
Sbjct: 195 VITEE 199


>gi|209732878|gb|ACI67308.1| Proteasome subunit beta type-6 precursor [Salmo salar]
          Length = 232

 Score = 97.7 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 32  GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADI 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L    +         +        ++               V T     
Sbjct: 91  VTYQLGFHSIELDEPPLVQTAANLFKQTCYRYREELMAGIIVAGWDKRRGGQVYTVPMGG 150

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
           +     V   GSG SY      +      + EE      +A+++A +  
Sbjct: 151 MIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAMERD 199


>gi|198453332|ref|XP_002137648.1| GA26418 [Drosophila pseudoobscura pseudoobscura]
 gi|198132314|gb|EDY68206.1| GA26418 [Drosophila pseudoobscura pseudoobscura]
          Length = 312

 Score = 97.7 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 65/189 (34%), Gaps = 10/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                  +T++ ++    V++A D Q +    +     +K+ RL +    AG +G   D 
Sbjct: 43  KPPTTTGSTVVGIKYRDGVILATDRQGTADGMITTNCMKKIYRLQENIY-AGGSGVCGDL 101

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
             +      +++ +  ++      +  +  +   L   +       +I   D     + +
Sbjct: 102 HQVARLTRAEMDLHQLKMGCKVPVVCANHFVKHMLYRYQGNIKITMLIGGVDNGGPSLYS 161

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
              +    +    A GSG   AL       +      SAE +A  A+       +Y+   
Sbjct: 162 TWFEGSTTKIPFAAQGSGNCAALPVLEKGWNASLDEKSAESLAIDAVRSGIRNDLYSGSP 221

Query: 180 IVLETLKVG 188
           I +  ++  
Sbjct: 222 IHICIIRAD 230


>gi|56541012|gb|AAH87457.1| Unknown (protein for MGC:99279) [Xenopus laevis]
          Length = 205

 Score = 97.7 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 66/194 (34%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITL 119
            T+ +RL+ +L  Y  +  R          +   L          +              
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
           + +    G  +E E+  +  G+          +L       E++     +AM  A D   
Sbjct: 121 ICSLDLIGCPMETED-FVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +   +V+  ++  
Sbjct: 180 VSGMGVVVHVIEKD 193


>gi|190359943|sp|A7KII6|PB6LB_SALSA RecName: Full=Proteasome subunit beta type-6-B like protein;
           AltName: Full=Low molecular mass protein 2-delta-B;
           Flags: Precursor
 gi|148362125|gb|ABQ59652.1| PSMB9b-like protein [Salmo salar]
 gi|262189356|gb|ACY30374.1| PSMB9b-like protein [Salmo salar]
          Length = 217

 Score = 97.7 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 16  GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + ++  +  Q+    +  A               L+A  + A         V T    
Sbjct: 75  AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +         GSG +Y    A A      S EE    A  A+++A      +     L 
Sbjct: 135 GMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLV 194

Query: 184 TLKVG 188
            +   
Sbjct: 195 VITEE 199


>gi|114652310|ref|XP_522798.2| PREDICTED: hypothetical protein [Pan troglodytes]
          Length = 261

 Score = 97.7 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 38/114 (33%), Gaps = 1/114 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 149 LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 207

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
             L ++   Y  +        A    +   +   + M L     I         
Sbjct: 208 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPG 261


>gi|209733028|gb|ACI67383.1| Proteasome subunit beta type-6 precursor [Salmo salar]
          Length = 232

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 32  GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADI 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L    +         +        ++               V T     
Sbjct: 91  VTYQLGFHSIELDEPPLVQTAANLFKQTCYRYREELMAGIIVAGWDKRRGGQVYTVPMGG 150

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
           +     V   GSG SY      +      + EE      +A+++A +  
Sbjct: 151 MIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAMERD 199


>gi|300123175|emb|CBK24448.2| unnamed protein product [Blastocystis hominis]
          Length = 271

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 70/190 (36%), Gaps = 14/190 (7%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           A K   TTI+ +     V+IA D + +    ++     KV  +       G AG++ADA 
Sbjct: 37  AFKKTGTTIVGLIYKDGVIIAADQRATTDSLIVDKECLKVHYIAPNIYCCG-AGTAADAD 95

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIA--DKTITLVITG 123
            + + +  +L     Q  + S   +       R+ +Y   + A +++   D   + +   
Sbjct: 96  EITDLVSHQLALMRLQTGKQSRVCSAMQLFADRLFQYQGYISAALILGGCDIDGSHLYGI 155

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNH 178
             +          +GSG   A+S              A E+A  A++  A I   + +  
Sbjct: 156 WPNGSVDSLPYDTLGSGSYAAMSVLEHRYRPDMEENEAIELAADAIN--AGIFNDLGSGG 213

Query: 179 NIVLETLKVG 188
              +  ++  
Sbjct: 214 CPNVRIIRKN 223


>gi|298708558|emb|CBJ30643.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 218

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG V++  D + S G  V    + K+  L      A  +GS+AD   + + 
Sbjct: 20  GTTIMAVQYDGGVIMGADSRTSTGTYVANRVSDKITSLHDHIY-ACRSGSAADTQAITDY 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L  +  +L R  +                  L A ++IA         V       
Sbjct: 79  VRYFLASHSVELGRLPLVKTAAKMARGLCYNNKDRLLAGMIIAGWDPVDGGTVYEIPLGG 138

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + EE     RKA+S A      +   I +  
Sbjct: 139 TMMKQKFAIGGSGSTYIYGHVDAAFKENMTKEEAQQFVRKAISHAMARDGSSGGVIRMVV 198

Query: 185 LKV 187
           +  
Sbjct: 199 IDK 201


>gi|224073937|ref|XP_002188518.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
           type, 7 [Taeniopygia guttata]
          Length = 211

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 7/140 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + TTI  V     VV+  D + + G  V   N  K+  +       G AG++AD     +
Sbjct: 45  NGTTIAGVIFKDGVVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTEMTTQ 103

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDV 127
            +   LE +     R    +  +  + + L   +  I  A      D T   + +     
Sbjct: 104 LISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIHPHG 163

Query: 128 LEPENGVMAIGSGGSYALSA 147
              +   + +G   S     
Sbjct: 164 STDKLPYVTMGECCSRGPGH 183


>gi|324512155|gb|ADY45042.1| Proteasome subunit beta type-5 [Ascaris suum]
          Length = 282

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 18/182 (9%)

Query: 14  HATTILTVRK-------DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
             TT L            G ++IA D + S G+ +   +  K+  +G   + A  AG +A
Sbjct: 59  KGTTTLAFIYEPKTENDKGGIIIAVDSRASAGEYISSKSVMKILDIGDRMV-ATMAGGAA 117

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITL 119
           D       + K    Y  +        A        L           +MI   DK    
Sbjct: 118 DCQFWTRIVAKYCTLYELREKSEITVAAASKYFSNVLYGYRNYGLSVGSMIAGYDKRGPA 177

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
           +     +    +  + ++GSG   A          + +   A  + R+A+  A      +
Sbjct: 178 IFKVDSEGQREQLRLCSVGSGSLSAYGVLDTFYQPKMTDEEARALGRRAIMHATFRDSGS 237

Query: 177 NH 178
             
Sbjct: 238 GG 239


>gi|62858119|ref|NP_001016503.1| proteasome beta 3 subunit [Xenopus (Silurana) tropicalis]
 gi|163916422|gb|AAI57195.1| proteasome (prosome, macropain) subunit, beta type 3 [Xenopus
           (Silurana) tropicalis]
          Length = 205

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ +R    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITL 119
            T+ +RL+ +L  Y  +  R          +   L          +              
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
           + +    G  +E E+  +  G+          +L       E++     +AM  A D   
Sbjct: 121 ICSLDLIGCPMETED-FVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +   +V+  ++  
Sbjct: 180 VSGMGVVVHVIEKD 193


>gi|210075667|ref|XP_502489.2| YALI0D06523p [Yarrowia lipolytica]
 gi|199425772|emb|CAG80677.2| YALI0D06523p [Yarrowia lipolytica]
          Length = 248

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 21/203 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L +  D   ++AGD + + G ++      KV  +G   I+    G S
Sbjct: 35  HRFNPYGDNGGTVLGIAGDDFALLAGDTRNTTGYSINSRYQPKVFDVGDN-ILVTANGFS 93

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
           AD   L+E +++ +E Y  Q  +     +    +   L N           I  +     
Sbjct: 94  ADGDALIENIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDEEGK 153

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN------------SAEEIARKA 165
               +             A GS  S  +    + ++ +N             A ++ + A
Sbjct: 154 GAVYSYDPVGSYEREFCRAGGSAASLVMPFLDSQVNKKNQQVENPPPLTLEEALKVVKDA 213

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
            S A +  ++    + +  +   
Sbjct: 214 FSSATERHIHVGDGLEILIVTKE 236


>gi|634095|emb|CAA58746.1| D13094 [Schizosaccharomyces pombe]
          Length = 147

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 8/146 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  R    +V+  D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 3   HGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPY-LLGTLAGGAADCQFWET 61

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGD 126
            L  +   +  +        A    +     + +   L     +         +     D
Sbjct: 62  VLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSD 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALM 152
               +  + ++GSG ++A     +  
Sbjct: 122 GTRLKGDLFSVGSGSTFAYGVLDSGY 147


>gi|159469772|ref|XP_001693037.1| 20S proteasome beta subunit A2 [Chlamydomonas reinhardtii]
 gi|158277839|gb|EDP03606.1| 20S proteasome beta subunit A2 [Chlamydomonas reinhardtii]
          Length = 241

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+     G VV+  DG+VS+G  +M   + K+  L +   +   +GS+ D   + + 
Sbjct: 17  GTTIVACTYKGGVVLGADGRVSIGNYIMNRASNKIAPLAEYIFLC-RSGSAPDTQVISDN 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIADKTITLVITGMGDVLE- 129
           ++  L+Q   +                       +L   +LIA           G  +  
Sbjct: 76  VKHYLDQISAESGEEPSVEMAANLVKLINYNNKDHLVGAMLIAGWDRHGGGQVYGAPIGG 135

Query: 130 --PENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y             + EE      +A+++A      +  +I L T
Sbjct: 136 TLVKEKWAIDGSGSTYIWGYCDNEYRDDMTREEAEKWVAEAIALAMTRDSSSGGSIRLIT 195

Query: 185 LK 186
           L 
Sbjct: 196 LD 197


>gi|307109183|gb|EFN57421.1| hypothetical protein CHLNCDRAFT_56068 [Chlorella variabilis]
          Length = 217

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 58/189 (30%), Gaps = 16/189 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VV+  D + S G  V      K+  L     I   +GS+AD   L   
Sbjct: 2   GTTIMAASYDGGVVMGADSRTSTGSYVANRVTDKITPLTDRVYIC-RSGSAADTQNLSRY 60

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE---------AMILIADKTITL---VIT 122
           ++  LEQ+  +L                    +         A +++A         V  
Sbjct: 61  VQWFLEQHGMELGDDPEVKTAAKLAQTMAYQNKNLLQASGGLAGLIVAGWDKHHGGSVFA 120

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHN 179
                   +      GSG +Y       L     S EE      KA+S A      +   
Sbjct: 121 IPLGGTLVKVPFSIGGSGSAYINGLCDRLWRPNMSEEECKAFVVKAVSHAMARDGSSGGC 180

Query: 180 IVLETLKVG 188
           I    +   
Sbjct: 181 IRTVVISKD 189


>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
 gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
          Length = 205

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T + ++    VV+A + +V+ G T+   + +KV ++     +A   G  AD   L +  
Sbjct: 10  GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGMASI-GILADMQVLTKIA 68

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVL 128
           +  +  Y           +    +   L +   +           D     +        
Sbjct: 69  KAYMSLYSLDTKTRPSIRSAAKLLSYVLFSNRILPYFVEVLVGGIDDEGPHLFIMDALGS 128

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             E+   A+G+G   A++   +      S   A ++A KA++ +      +   I + T+
Sbjct: 129 LIEDDYAAVGTGTKLAIAILESNYKPGMSIKEARDLAIKAINQSISRDPVSGDGIDILTI 188

Query: 186 KVG 188
              
Sbjct: 189 TGN 191


>gi|90109362|pdb|2FHG|H Chain H, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109364|pdb|2FHG|C Chain C, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109366|pdb|2FHG|E Chain E, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109368|pdb|2FHG|G Chain G, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109370|pdb|2FHG|J Chain J, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109372|pdb|2FHG|L Chain L, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109374|pdb|2FHG|N Chain N, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109376|pdb|2FHG|P Chain P, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109378|pdb|2FHG|R Chain R, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109380|pdb|2FHG|T Chain T, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109382|pdb|2FHG|V Chain V, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109384|pdb|2FHG|X Chain X, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109386|pdb|2FHG|Z Chain Z, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109388|pdb|2FHG|2 Chain 2, Crystal Structure Of Mycobacterial Tuberculosis Proteasome
 gi|90109390|pdb|2FHH|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109392|pdb|2FHH|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109394|pdb|2FHH|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109396|pdb|2FHH|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109398|pdb|2FHH|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109400|pdb|2FHH|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109402|pdb|2FHH|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109404|pdb|2FHH|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109406|pdb|2FHH|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109408|pdb|2FHH|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109410|pdb|2FHH|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109412|pdb|2FHH|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109414|pdb|2FHH|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|90109416|pdb|2FHH|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With A Peptidyl Boronate Inhibitor Mln-273
 gi|258588506|pdb|3HFA|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588507|pdb|3HFA|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588508|pdb|3HFA|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588509|pdb|3HFA|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588510|pdb|3HFA|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588511|pdb|3HFA|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588512|pdb|3HFA|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588513|pdb|3HFA|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588514|pdb|3HFA|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588515|pdb|3HFA|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588516|pdb|3HFA|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588517|pdb|3HFA|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588518|pdb|3HFA|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|258588519|pdb|3HFA|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant
 gi|299689167|pdb|3MFE|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689174|pdb|3MFE|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689210|pdb|3MI0|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689212|pdb|3MI0|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689214|pdb|3MI0|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689215|pdb|3MI0|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689217|pdb|3MI0|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689219|pdb|3MI0|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689221|pdb|3MI0|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689223|pdb|3MI0|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689225|pdb|3MI0|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689227|pdb|3MI0|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689229|pdb|3MI0|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689231|pdb|3MI0|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689233|pdb|3MI0|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|299689235|pdb|3MI0|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           At 2.2 A
 gi|307776450|pdb|3KRD|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776452|pdb|3KRD|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776454|pdb|3KRD|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776455|pdb|3KRD|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776457|pdb|3KRD|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776459|pdb|3KRD|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776461|pdb|3KRD|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776463|pdb|3KRD|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776465|pdb|3KRD|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776467|pdb|3KRD|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776469|pdb|3KRD|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776471|pdb|3KRD|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776473|pdb|3KRD|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
 gi|307776475|pdb|3KRD|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           In Complex With Fellutamide B
          Length = 240

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 22/184 (11%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ ++  G VV+AGD + + G  +   + RKV          G AG++A A       
Sbjct: 1   TTIVALKYPGGVVMAGDRRSTQGNMISGRDVRKVYITDDYTA-TGIAGTAAVAVEFARLY 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM----------- 124
             +LE Y            K  R+   +R   A  +     + L+               
Sbjct: 60  AVELEHYEKLEGVPLTFAGKINRLAIMVRGNLAAAMQGLLALPLLAGYDIHASDPQSAGR 119

Query: 125 -------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICV 174
                  G     E G  A+GSG  +A S+ + L S     +S   +A +A+  AAD   
Sbjct: 120 IVSFDAAGGWNIEEEGYQAVGSGSLFAKSSMKKLYSQVTDGDSGLRVAVEALYDAADDDS 179

Query: 175 YTNH 178
            T  
Sbjct: 180 ATGG 183


>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
           aggregans DSM 17230]
 gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
           aggregans DSM 17230]
          Length = 200

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + ++ +  VV+A + ++S G  ++    +KV R+    +IA  AG  AD  +L   
Sbjct: 9   GATAVGIKVNDGVVVAAEKRISYGGYIVSRAGKKVFRIADHMVIAA-AGLFADMQSLSRI 67

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-------ILIADKTITLVITGMGDV 127
           +  ++              A    +   L + + M           D+    +       
Sbjct: 68  ISAEIMYRELLSSSKMRVRAAAKLLSAILYSYKLMPFLSEIIFAGFDEEGYHLYVLDPVG 127

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E+   AIG+G S A+    +      +   A E+A K++  A      +   I +  
Sbjct: 128 SIIEDDYAAIGTGASIAIGVIESEYKNTLTIDQATELAIKSVKAAISRDAVSGDGIDIAV 187

Query: 185 LK 186
           + 
Sbjct: 188 VT 189


>gi|294942317|ref|XP_002783482.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
 gi|239895942|gb|EER15278.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
          Length = 242

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 69/209 (33%), Gaps = 23/209 (11%)

Query: 1   MVVMGDKH--YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           M  M  K+       +  T + V      V++ D +VS G ++   N  K+ +L +  +I
Sbjct: 22  MAPMEHKNEFNPYVDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVI 81

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
              +G  AD  TL + L+ ++ +Y ++  R     A    +   L             I 
Sbjct: 82  TT-SGMLADQITLHKVLKNRVARYVHEHRREPTIGAVAQMLSNILYYKRFFPYYTFNMIA 140

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALM---------STQNSA--- 158
            +                       A GSG S   S     +             +    
Sbjct: 141 GIDENGQGKVYGYDAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHEALTEGQM 200

Query: 159 EEIARKAMSIAADICVYTNHNIVLETLKV 187
            E+ +  ++ A +  ++T  +  + T+  
Sbjct: 201 VELCKDVIASATERDIHTGDSNTVCTIDT 229


>gi|296197836|ref|XP_002746462.1| PREDICTED: proteasome subunit beta type-9-like isoform 1
           [Callithrix jacchus]
          Length = 219

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGKAVVNRVFDKLSPLHERIYCA-LSGSAADAQAMADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +L+A  D+     + G    +
Sbjct: 79  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLLVAGWDQREGGQVYGTLGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE  R    A+++A      +   I L T+
Sbjct: 139 LTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|222138149|gb|ACM45577.1| LMP7 [Scophthalmus maximus]
          Length = 273

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 9/177 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +   +  KV  +    ++   +GS+AD      
Sbjct: 70  HGTTTLAFKFKHGVIVAVDSRASAGSYLASNDVNKVIEINPY-LLGTMSGSAADCQYWER 128

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR------MDKYLRNLEAMILIADKTITLV--ITGMG 125
            L K+   Y  +        A          + ++  ++ +MI   D+           G
Sbjct: 129 LLAKECRLYRLRNNHRISVAAAPSCCQHDAGLQRHGLSMGSMICGWDREGPGCTMWMITG 188

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
            V      + A+G+    A             A E+ R+ +  A     Y+   + +
Sbjct: 189 RVCLAACSLPAVGAASPTAWWQRFPGRHATEEAYELGRRGIVHATHRDAYSGGVVNM 245


>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
          Length = 220

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 16/196 (8%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                 +  TI+ +      +IAGD ++S G  ++  N RKV  +    + A  +G  AD
Sbjct: 14  FDPYTDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAA-SGMHAD 72

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
              L++ ++ +   Y  +  R          +   +    +        +  + +     
Sbjct: 73  VQRLIKHMKIESTDYHLKTQREMAIEQFTRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGA 132

Query: 128 LEPEN--------GVMAIGSGGSYALSAARALMSTQNSAE-------EIARKAMSIAADI 172
           +   +           + G+G +         +  ++ AE       E+ + A    A+ 
Sbjct: 133 VYSYDVIGSTLRTRYGSAGTGNAMICPILDEAILPKSDAEITREFAFELIQSAFKSCAER 192

Query: 173 CVYTNHNIVLETLKVG 188
            +YT  ++V   +   
Sbjct: 193 DIYTGDSVVAMCISAD 208


>gi|3114278|pdb|1RYP|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114292|pdb|1RYP|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513421|pdb|1G65|I Chain I, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513435|pdb|1G65|W Chain W, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|20150385|pdb|1JD2|I Chain I, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150392|pdb|1JD2|P Chain P, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|93279376|pdb|2F16|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279390|pdb|2F16|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279664|pdb|2FNY|I Chain I, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279678|pdb|2FNY|W Chain W, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032210|pdb|2FAK|I Chain I, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032224|pdb|2FAK|W Chain W, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490851|pdb|2GPL|I Chain I, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490865|pdb|2GPL|W Chain W, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016375|pdb|3D29|I Chain I, Proteasome Inhibition By Fellutamide B
 gi|190016389|pdb|3D29|W Chain W, Proteasome Inhibition By Fellutamide B
 gi|197725329|pdb|3E47|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725343|pdb|3E47|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939220|pdb|3DY3|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939234|pdb|3DY3|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939248|pdb|3DY4|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939262|pdb|3DY4|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828245|pdb|3GPJ|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828259|pdb|3GPJ|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588329|pdb|3GPT|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588343|pdb|3GPT|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588357|pdb|3GPW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588371|pdb|3GPW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588551|pdb|3HYE|I Chain I, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588565|pdb|3HYE|W Chain W, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|298508231|pdb|1VSY|J Chain J, Proteasome Activator Complex
 gi|298508245|pdb|1VSY|X Chain X, Proteasome Activator Complex
 gi|298508447|pdb|3L5Q|N Chain N, Proteasome Activator Complex
 gi|298508461|pdb|3L5Q|Z Chain Z, Proteasome Activator Complex
 gi|330689389|pdb|3MG4|I Chain I, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689403|pdb|3MG4|W Chain W, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 204

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 56/195 (28%), Gaps = 15/195 (7%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                ++   ++ +     V IA D ++      +     K+   G   +  G  G + D
Sbjct: 1   SDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGH--VFLGITGLATD 58

Query: 68  AFTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTIT 118
             TL E    K   Y  +  R+               + R   Y        + +     
Sbjct: 59  VTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKP 118

Query: 119 LVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
            +        ++     +  G+          +L       E++     +A+  AAD   
Sbjct: 119 FIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDA 178

Query: 175 YTNHNIVLETLKVGD 189
            +    V+  +K  +
Sbjct: 179 LSGWGAVVYIIKKDE 193


>gi|195151889|ref|XP_002016871.1| GL21838 [Drosophila persimilis]
 gi|194111928|gb|EDW33971.1| GL21838 [Drosophila persimilis]
          Length = 312

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 10/189 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                  +T++ ++    V++A D Q +    +     +K+ RL +    AG +G   D 
Sbjct: 43  KPPTTTGSTVVGIKYRDGVILATDRQGTADGRITTNCMKKIYRLQENIY-AGGSGVCGDL 101

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
             +      +++ +  Q+      +  +  +   L   +       +I   D     + +
Sbjct: 102 HQVARLTRAEMDLHQLQMGCKVPVVCANHFVKHMLYRYQGNIKITMLIGGVDNGGPSLYS 161

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
              +    +    A GSG   AL       +      SAE +A  A+       +Y+   
Sbjct: 162 TWFEGSTTKIPFAAQGSGNCAALPVLEKGWNASLDEKSAESLAIDAVRSGIRNDLYSGSP 221

Query: 180 IVLETLKVG 188
           I +  ++  
Sbjct: 222 IHICIIRTD 230


>gi|50290063|ref|XP_447463.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526773|emb|CAG60400.1| unnamed protein product [Candida glabrata]
          Length = 205

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 56/195 (28%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++   ++ +     V IA D ++      +  N  KV   G   +  G  G + 
Sbjct: 1   MSDPSSINGGIVVAMAGKDCVAIACDLRLGNQSLGVSNNFEKVFNYGH--VFFGITGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  +  R                + R   Y        + +    
Sbjct: 59  DVTTLNELFRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L      AE++     +A+  AAD  
Sbjct: 119 PFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRD 178

Query: 174 VYTNHNIVLETLKVG 188
             +    V+  +K  
Sbjct: 179 ALSGWGAVVYIIKKD 193


>gi|6320941|ref|NP_011020.1| Pup3p [Saccharomyces cerevisiae S288c]
 gi|141337|sp|P25451|PSB3_YEAST RecName: Full=Proteasome component PUP3; AltName: Full=Macropain
           subunit PUP3; AltName: Full=Multicatalytic endopeptidase
           complex subunit PUP3
 gi|11514000|pdb|1G0U|I Chain I, A Gated Channel Into The Proteasome Core Particle
 gi|11514014|pdb|1G0U|W Chain W, A Gated Channel Into The Proteasome Core Particle
 gi|14488814|pdb|1FNT|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488828|pdb|1FNT|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765708|pdb|1Z7Q|J Chain J, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765722|pdb|1Z7Q|X Chain X, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|178847468|pdb|2ZCY|I Chain I, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847482|pdb|2ZCY|W Chain W, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847510|pdb|3BDM|I Chain I, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847524|pdb|3BDM|W Chain W, Yeast 20s Proteasome:glidobactin A-Complex
 gi|323462944|pdb|3NZJ|I Chain I, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462958|pdb|3NZJ|W Chain W, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462972|pdb|3NZW|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462986|pdb|3NZW|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323463000|pdb|3NZX|I Chain I, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463014|pdb|3NZX|W Chain W, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|172337|gb|AAA34946.1| ORF1 [Saccharomyces cerevisiae]
 gi|603332|gb|AAB64649.1| Pup3p [Saccharomyces cerevisiae]
 gi|151944812|gb|EDN63071.1| 20S proteasome subunit beta3_sc [Saccharomyces cerevisiae YJM789]
 gi|190405659|gb|EDV08926.1| proteasome component PUP3 [Saccharomyces cerevisiae RM11-1a]
 gi|256271461|gb|EEU06515.1| Pup3p [Saccharomyces cerevisiae JAY291]
 gi|259146019|emb|CAY79279.1| Pup3p [Saccharomyces cerevisiae EC1118]
 gi|285811728|tpg|DAA07756.1| TPA: Pup3p [Saccharomyces cerevisiae S288c]
 gi|323305263|gb|EGA59010.1| Pup3p [Saccharomyces cerevisiae FostersB]
 gi|323333773|gb|EGA75164.1| Pup3p [Saccharomyces cerevisiae AWRI796]
 gi|323337981|gb|EGA79220.1| Pup3p [Saccharomyces cerevisiae Vin13]
 gi|323355291|gb|EGA87116.1| Pup3p [Saccharomyces cerevisiae VL3]
          Length = 205

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 56/196 (28%), Gaps = 15/196 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++   ++ +     V IA D ++      +     K+   G   +  G  G + 
Sbjct: 1   MSDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGH--VFLGITGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  +  R+               + R   Y        + +    
Sbjct: 59  DVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       E++     +A+  AAD  
Sbjct: 119 PFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRD 178

Query: 174 VYTNHNIVLETLKVGD 189
             +    V+  +K  +
Sbjct: 179 ALSGWGAVVYIIKKDE 194


>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
 gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
          Length = 204

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 69/184 (37%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + ++    VV+A + +++ G   + ++ +KV  +     +A  AG  AD  T+ + 
Sbjct: 8   GATAVGIKAKDGVVLAAEKRITYGFYSLSSSGKKVYVVNDRMALA-SAGVIADMQTIAKI 66

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           L    + Y  +  R     A    +   + N   M  IA       D+    +       
Sbjct: 67  LRVNAKMYELESRRKPSIAAMAKLLSVIMFNRRIMPFIAEVLVGGYDEEGPHIFVLDPVG 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E+   A+G+G   A+S   A  S       A ++A  A+  A +    +   I L T
Sbjct: 127 SLIEDDYAALGTGAKMAISILDANYSKDVDVSGARKLAINAIRAALERDPVSGGGIDLVT 186

Query: 185 LKVG 188
           +   
Sbjct: 187 VTAD 190


>gi|218884599|ref|YP_002428981.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
 gi|302595713|sp|B8D683|PSB2_DESK1 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|218766215|gb|ACL11614.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
          Length = 206

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 12/181 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TT + +     VV+A D + + G  V     +K+ ++     +   +G  ADA  ++E  
Sbjct: 8   TTTVGLVTGDYVVLAADKRATAGPMVYHKAVKKISKITDYAAL-TISGLVADAQYIVENA 66

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM--------ILIADKTITLVITGMGDV 127
                +Y  ++       A   R+   L              +   D T   +       
Sbjct: 67  RYIAREYEIEMGGPIPIKALASRISLILSVYLRYSPFIVQLLLGGRDSTGASLYYMDLYG 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
                  MA GSG   A         +  S   A+++A  A+S A     ++   + +  
Sbjct: 127 SVTREKYMATGSGSPVAFGILEKNYRSDLSLEEAKKLAFNAVSSAIMRDGFSGEGVDIVV 186

Query: 185 L 185
           +
Sbjct: 187 I 187


>gi|21465649|pdb|1IRU|H Chain H, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465663|pdb|1IRU|V Chain V, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
          Length = 205

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 61/180 (33%), Gaps = 11/180 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + +
Sbjct: 1   TTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADAV 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVL 128
             +L  +  +L    +         +        ++          +    V +     +
Sbjct: 60  TYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGM 119

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE  +    A+++A +    +   I L  +
Sbjct: 120 MVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAI 179


>gi|148229244|ref|NP_001088741.1| proteasome (prosome, macropain) subunit, beta type, 3 [Xenopus
           laevis]
 gi|56270462|gb|AAH87395.1| LOC496005 protein [Xenopus laevis]
          Length = 205

 Score = 96.6 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ ++    V IA D +  +   ++  + +K+  +G+   I G AG + D 
Sbjct: 2   SIMSYNGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGERLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITL 119
            T+ +RL+ +L  Y  +  R          +   L          +              
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
           + +    G  +E E+  +  G+          +L       E++     +AM  A D   
Sbjct: 121 ICSLDLIGCPMETED-FVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +   +V+  ++  
Sbjct: 180 VSGMGVVVHVIEKD 193


>gi|159037957|ref|YP_001537210.1| 20S proteasome A and B subunits [Salinispora arenicola CNS-205]
 gi|302595784|sp|A8M2A3|PSB_SALAI RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PrcB; Flags: Precursor
 gi|157916792|gb|ABV98219.1| 20S proteasome A and B subunits [Salinispora arenicola CNS-205]
          Length = 279

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 61/174 (35%), Gaps = 21/174 (12%)

Query: 25  GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN 84
           G VV+AGD + ++G  + + +  KV      + + G AG++     L+   + +LE Y  
Sbjct: 63  GGVVMAGDRRATMGNLIAQRDIEKVYPADAYS-LVGMAGAAGIGIELIRLFQVELEHYEK 121

Query: 85  QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-----------------DV 127
                     K  R+   +R      +     + +                         
Sbjct: 122 IEGAMLSLDGKANRLAAMVRGNLGAAMQGLAVVPMFAGFDLAANDPVKAGRIFSFDVTGG 181

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
              E G  A+GSG  +A SA +       S   A  +A +A+  AAD    T  
Sbjct: 182 PYEETGYDAVGSGSLFAKSALKKRFRVGLSVDDAMRLAVEALYDAADDDTATGG 235


>gi|308159821|gb|EFO62339.1| Proteasome subunit beta type 1 [Giardia lamblia P15]
          Length = 214

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 71/203 (34%), Gaps = 16/203 (7%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M +          +  TI+ +      +IAGD ++S G  ++  N RKV  +    + A 
Sbjct: 1   MPLKDLDFDPYTDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAA 60

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   L++ ++ +  +Y  +  +          +   +    +        +  +
Sbjct: 61  -SGMHADVQRLIKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGI 119

Query: 121 ITGMGDVLEPEN--------GVMAIGSGGSYALSAARALMSTQNSAE-------EIARKA 165
            +     +   +           + G+G +         + ++N AE       E+ + A
Sbjct: 120 DSEGKGAVYSYDVIGSTLRTRYGSAGTGNAMICPILDEAILSKNEAEITREFAFELIQSA 179

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
               A+  +YT  ++V   +   
Sbjct: 180 FRSCAERDIYTGDSVVAMCISAD 202


>gi|332223030|ref|XP_003260674.1| PREDICTED: proteasome subunit beta type-5-like isoform 5 [Nomascus
           leucogenys]
          Length = 203

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 1/113 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L     I        
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGP 168


>gi|195343577|ref|XP_002038372.1| GM10658 [Drosophila sechellia]
 gi|194133393|gb|EDW54909.1| GM10658 [Drosophila sechellia]
          Length = 322

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ +  DG V+I  + + ++G  ++    RK+  L      AG AG++ D   L+E 
Sbjct: 49  GTTVVGIVFDGGVIIGAESKAAMGSMILSKTIRKIVELQSNIFAAG-AGTARDTKALVEL 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDW-----RMDKYLRNLEAMILI--ADKTITLVITGMGDV 127
              +LE +        V +          + +Y RN++A ++I  AD +   +     D 
Sbjct: 108 TRAQLELHRMNTGFRKVPVCCANQMIRQLLFRYNRNIDADMIIGGADSSGAHLFCTRSDG 167

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADI--CVYTNHNIVLET 184
                   ++GSG   ++S   +  S   S E   A    ++AA +   + +   + L  
Sbjct: 168 STDTAPFASLGSGYLVSMSILESRWSEDLSEESACALACDAVAAGMKNDLSSGGQVSLCV 227

Query: 185 LKVG 188
           ++  
Sbjct: 228 VRCD 231


>gi|16588840|gb|AAL26914.1|AF323592_1 putative 20S proteasome beta subunit 5 [Prunus persica]
          Length = 201

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 11/156 (7%)

Query: 33  GQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVE 92
            + S+G  +   +  K+  +    ++   AG +AD       L  K   +     R    
Sbjct: 2   SRASMGGYISSQSVEKIIEINPY-MLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 60

Query: 93  LAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLEPENGVMAIGSGGSYAL 145
                 +   L +   M L         D+T   +     +    +    ++GSG  YA 
Sbjct: 61  TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFSVGSGSPYAY 120

Query: 146 SAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
                      S   A E+AR+A+  A      +  
Sbjct: 121 GVLDDGYRYDMSVEEAAELARRAIYHATFRDGASGG 156


>gi|114665822|ref|XP_001161912.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 6 isoform 1 [Pan troglodytes]
          Length = 213

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 8/154 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 34  GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADA 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +  +L  +  +L    +         +        ++          +    V +     
Sbjct: 93  VTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
           +         GSG SY      A      + EE 
Sbjct: 153 MMVRQSFAIGGSGSSYIYGYVDATYREGMTKEEC 186


>gi|294955484|ref|XP_002788528.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
 gi|239904069|gb|EER20324.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
          Length = 241

 Score = 95.8 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           ++      +  T + V      V++ D +VS G ++   N  K+ +L +  +I   +G  
Sbjct: 28  NEFNPYMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITT-SGML 86

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
           AD  TL + L+ ++ +Y ++  R     A    +   L             I  +     
Sbjct: 87  ADQITLHKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGK 146

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALM---------STQNSA---EEIARKA 165
                             A GSG S   S     +             +     E+ +  
Sbjct: 147 GKVYGYDAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHEALTEGQMVELCKDV 206

Query: 166 MSIAADICVYTNHNIVLETLKV 187
           ++ A +  ++T  +  + T+  
Sbjct: 207 IASATERDIHTGDSNTICTIDS 228


>gi|237833495|ref|XP_002366045.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
           ME49]
 gi|211963709|gb|EEA98904.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
           ME49]
 gi|221486248|gb|EEE24509.1| proteasome component PRE3 precursor / proteasome subunit beta type
           6 precursor, putative [Toxoplasma gondii GT1]
          Length = 245

 Score = 95.8 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 13/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V   G VV+  D + S G  V+   ARK+ R+ +   +   +GS+AD   + + 
Sbjct: 45  GTTIVAVSFKGGVVLGADTRTSAGSYVVNRAARKISRVHERICVC-RSGSAADTQAVTQI 103

Query: 75  LEKKLEQYPNQLLR--SSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMG 125
           ++  ++QY  +L +       A          ++   L A +++A         +     
Sbjct: 104 VKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHKDALTAGLIVAGFDKVKGGQIYALPL 163

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                     A GSG ++  +   A      + EE   + + +++ A      +   + +
Sbjct: 164 GGALVPMQYTAGGSGSAFISAYMDANFKQNMTQEEAVNLVKNSVAYAISRDGSSGGMVRV 223

Query: 183 ETLKVG 188
             +   
Sbjct: 224 VVITED 229


>gi|119567805|gb|EAW47420.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
           CRA_a [Homo sapiens]
          Length = 219

 Score = 95.8 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 21/192 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   D  TL + +E
Sbjct: 17  TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHGDCLTLTKIIE 75

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------ITGMGDVL 128
            +L+ Y +   ++    A    +   L +           I  +         +      
Sbjct: 76  ARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGS 135

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAMSIAADICVYT 176
              +   A GS  +         +  +N             A  + +     AA+  VYT
Sbjct: 136 YQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYT 195

Query: 177 NHNIVLETLKVG 188
              + +  +   
Sbjct: 196 GDALRICIVTKE 207


>gi|302774543|ref|XP_002970688.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
 gi|300161399|gb|EFJ28014.1| hypothetical protein SELMODRAFT_227995 [Selaginella moellendorffii]
          Length = 239

 Score = 95.8 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 66/200 (33%), Gaps = 13/200 (6%)

Query: 1   MVVMGDKHYAVKMH--ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           M +  D  +    H   TTI+ V     VV+  D + + G  V    + K+ +L     I
Sbjct: 1   MALSDDSSWMTAAHSMGTTIIGVEYADGVVLGADSRTTTGIYVANRASDKISKLTDNVYI 60

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI-------L 111
              +GS+AD   + + +   L Q+   L   +   A    + +   + ++ +        
Sbjct: 61  C-RSGSAADTQVISDYVRYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSFLEAGMIVGG 119

Query: 112 IADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
                   +                 GSG +Y             S   A+++  KA+S+
Sbjct: 120 WDKHEKGSIFGVPIGGTLLRVPFTIGGSGSTYIFGFLDQAWRPGMSKQEAQDLVVKAVSL 179

Query: 169 AADICVYTNHNIVLETLKVG 188
           A      +   +   T+   
Sbjct: 180 AMARDGGSGGVVRTVTISSE 199


>gi|170595731|ref|XP_001902498.1| Proteasome A-type and B-type family protein [Brugia malayi]
 gi|158589802|gb|EDP28656.1| Proteasome A-type and B-type family protein [Brugia malayi]
          Length = 277

 Score = 95.8 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 18/183 (9%)

Query: 13  MHATTILTVRK-------DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +  TT L            G +++A D + S G+ +   +  K+  +G   + A  AG +
Sbjct: 53  LKGTTTLAFIYEPKTPADKGGIIVAVDSRASAGEYISSKSVMKILDIGDRMV-ATMAGGA 111

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTIT 118
           AD       + K    Y  +        A        L +         +MI   DK   
Sbjct: 112 ADCQFWTRIVAKYCTLYELREKTEITVAAASKYFQNVLYSYRNHGLSVGSMIAGYDKRGP 171

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +     +    +  + +IGSG   A          + + EE   + R+ +  A      
Sbjct: 172 AIFKVDSEGQRIQLRLCSIGSGSLSAYGILDNFYRPKMTDEEAYKLGRRGIMHATYRDTG 231

Query: 176 TNH 178
           +  
Sbjct: 232 SGG 234


>gi|296197838|ref|XP_002746463.1| PREDICTED: proteasome subunit beta type-9-like isoform 2
           [Callithrix jacchus]
          Length = 209

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 10  GTTIMAVEFDGGVVVGSDSRVSAGKAVVNRVFDKLSPLHERIYCA-LSGSAADAQAMADM 68

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +L+A  D+     + G    +
Sbjct: 69  AAYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLLVAGWDQREGGQVYGTLGGM 128

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE  R    A+++A      +   I L T+
Sbjct: 129 LTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 188

Query: 186 KV 187
             
Sbjct: 189 TA 190


>gi|28207945|emb|CAD62626.1| unnamed protein product [Homo sapiens]
          Length = 201

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 1/113 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 55  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 113

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L     I        
Sbjct: 114 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGP 166


>gi|209735834|gb|ACI68786.1| Proteasome subunit beta type-6 precursor [Salmo salar]
          Length = 232

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 32  GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFCC-RSGSAADTQAVADI 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------DV 127
           +  +L  +  +L    +         +        ++             G         
Sbjct: 91  VTYQLGFHSIELDEPPLVQTAANLFKQTCYRYREELMAGIIVAGWDKRRGGQVHTVPMGG 150

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
           +     V   GSG SY      +      + EE      +A+++A +  
Sbjct: 151 MIVRQPVSVGGSGSSYIYGFMDSNYKPGMTKEECLHFCTQALALAMERD 199


>gi|309359788|emb|CAP32364.2| CBR-PBS-1 protein [Caenorhabditis briggsae AF16]
          Length = 239

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ +  +G VV+  D + S G  +      K+  +    ++   +GS+AD   + + 
Sbjct: 23  GTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVC-RSGSAADTQAIADI 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE------AMILIADKTITL-VITGMGDV 127
            +  ++ Y     +            ++L N         ++   D  +   V       
Sbjct: 82  AKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDSELGGQVYAIPIGG 141

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
                   A GSG ++      +      + EE   I ++A+ +A      +   + L  
Sbjct: 142 FVSRQRSTASGSGSTFVQGFLDSQWRPDLTLEECKAIVKQAVGLATFRDGSSGGVVRLAV 201

Query: 185 LKV 187
           +  
Sbjct: 202 IDK 204


>gi|294940012|ref|XP_002782634.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
 gi|239894486|gb|EER14429.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
          Length = 241

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           ++      +  T + V      V++ D +VS G ++   N  K+ +L +  +I   +G  
Sbjct: 28  NEFNPYMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITT-SGML 86

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
           AD  TL + L+ ++ +Y ++  R     A    +   L             I  +     
Sbjct: 87  ADQITLHKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGK 146

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALM---------STQNSA---EEIARKA 165
                             A GSG S   S     +             +     E+ +  
Sbjct: 147 GKVYGYDAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHEALTEGQMVELCKDV 206

Query: 166 MSIAADICVYTNHNIVLETLKV 187
           ++ A +  ++T  +  + T+  
Sbjct: 207 IASATERDIHTGDSNTICTIDS 228


>gi|254168241|ref|ZP_04875087.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|254168404|ref|ZP_04875249.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|289595801|ref|YP_003482497.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
           boonei T469]
 gi|302595865|sp|B5IEE5|PSB_ACIB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|197622685|gb|EDY35255.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|197622750|gb|EDY35319.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|289533588|gb|ADD07935.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
           boonei T469]
          Length = 210

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 54/176 (30%), Gaps = 11/176 (6%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
              VV+  + + S+   +    A+K+ +L   NI    AG   D   L+  +  ++  Y 
Sbjct: 16  KDGVVMGTEHRASMETFIAHKTAQKLYKLD-YNIGMTTAGLVGDLQVLVRYMRAEINLYR 74

Query: 84  NQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPENGVMA 136
            +        A    +   L   +             D     V          E+   +
Sbjct: 75  IRRKMYMPVGAAATLLSNILNERKFFPYYVGLLVGGFDSKGYHVFAIDAAGGAIEDKYAS 134

Query: 137 IGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVGD 189
           +GSG  +             S +E   +  + ++ A      +   I + T+   +
Sbjct: 135 VGSGSLFVYGVLEDRWKDDLSLDEGINLVIRGINAAMRRDAASGDGISVATITKDE 190


>gi|185133551|ref|NP_001117730.1| proteasome subunit beta type-9 precursor [Oncorhynchus mykiss]
 gi|4741816|gb|AAD28715.1|AF112117_1 low molecular mass polypeptide complex subunit 2 [Oncorhynchus
           mykiss]
          Length = 217

 Score = 95.8 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+AD+ T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADSQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      S E+        +S+A      +     L T+
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEK 199


>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
          Length = 322

 Score = 95.4 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 64/195 (32%), Gaps = 20/195 (10%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M+  T+  +     V+IA D +++ G  ++  N  ++  L    ++ G AG   D  TLL
Sbjct: 1   MNGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVL-GNAGCWTDMTTLL 59

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------ITGM 124
             LE  +++Y           A    +   L N     + A   +  +         +  
Sbjct: 60  RTLEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYD 119

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMST--------QNSAEE---IARKAMSIAADIC 173
                        GS  S+ +    + ++             EE   + ++  +   +  
Sbjct: 120 AIGSFELMKYAVQGSAQSHIIPILDSCVAKKNRNEPYVDLDREEALNLMKEVFTAGTERE 179

Query: 174 VYTNHNIVLETLKVG 188
             T   + + T+   
Sbjct: 180 KDTGDQLEILTVTAH 194


>gi|114052162|ref|NP_001040460.1| proteasome beta 3 subunit [Bombyx mori]
 gi|95102980|gb|ABF51431.1| proteasome beta 3 subunit [Bombyx mori]
          Length = 205

 Score = 95.4 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 64/194 (32%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  N  KV ++G    + G  G + D 
Sbjct: 2   SILAYNGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYV-GLPGLATDT 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMIL-------IADKTITL 119
            T+ +RL+ ++  Y  +  R          +    Y R      +               
Sbjct: 61  QTVFQRLKFRMNLYELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLDPYDNQPY 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
           V      G   EPE+  +  G+          AL       +E+     +A+  AAD   
Sbjct: 121 VCNMDLIGCPNEPED-FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVNAADRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +    V+  ++  
Sbjct: 180 ISGWGAVVYIIEKD 193


>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
          Length = 322

 Score = 95.4 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 64/195 (32%), Gaps = 20/195 (10%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M+  T+  +     V+IA D +++ G  ++  N  ++  L    ++ G AG   D  TLL
Sbjct: 1   MNGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVL-GNAGCWTDMTTLL 59

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------ITGM 124
             LE  +++Y           A    +   L N     + A   +  +         +  
Sbjct: 60  RTLEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYD 119

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMST--------QNSAEE---IARKAMSIAADIC 173
                        GS  S+ +    + ++             EE   + ++  +   +  
Sbjct: 120 AIGSFELMKYAVQGSAQSHIIPILDSCVAKKNRNEPYVDLDREEALNLMKEVFTAGTERE 179

Query: 174 VYTNHNIVLETLKVG 188
             T   + + T+   
Sbjct: 180 KDTGDQLEILTVTAH 194


>gi|289582997|ref|YP_003481463.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
           ATCC 43099]
 gi|302595777|sp|D3SSQ6|PSB_NATMM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|289532550|gb|ADD06901.1| proteasome endopeptidase complex, beta subunit [Natrialba magadii
           ATCC 43099]
          Length = 243

 Score = 95.4 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 10/174 (5%)

Query: 24  DGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQY 82
           +  VVIA D + SLG   V   N +KV ++     +    GS   A + +  L  ++  Y
Sbjct: 57  EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGAL-TMVGSVGGAQSFIGSLRAEVNLY 115

Query: 83  PNQLLRSSVELAKDWRMDKY-----LRNLEAMILIADKTITLVITGMGDVLEPENGVMAI 137
             +        A       +        +  ++   D+  + V +        E+     
Sbjct: 116 EARRGEPISMDALATLAGNFARGGPFFAIHPILGGVDEEGSHVYSIDPAGGVMEDDYTVT 175

Query: 138 GSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           GSG   A            S   A  +A +A+  AA+    + + + L  +   
Sbjct: 176 GSGMQLAYGLLEQEFEEDLSNDEATTVAARAIKSAAERDTGSGNGVFLCEITDE 229


>gi|302831986|ref|XP_002947558.1| hypothetical protein VOLCADRAFT_57026 [Volvox carteri f.
           nagariensis]
 gi|300267422|gb|EFJ51606.1| hypothetical protein VOLCADRAFT_57026 [Volvox carteri f.
           nagariensis]
          Length = 242

 Score = 95.4 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+     G  V+  DG+VS+G  +M   + K+  L +   +   +GS+ D   + + 
Sbjct: 17  GTTIVACTYKGGAVLGADGRVSIGNYIMNRASNKIAPLSEYIFLC-RSGSAPDTQIISDN 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------DV 127
           +   L     +             +     N +  ++ A   +     G G         
Sbjct: 76  VRHYLNHMIAESGEEPSVEMAANLVRLINYNNKDHLVGAMLVVGWDKHGGGQVFGAPIGG 135

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      +      + EE     ++A+++A      +   I + T
Sbjct: 136 TLVKEKWAIDGSGSTYIWGYCDSEFKEGMTREEAENWVKEALALAMTRDASSGGTIRIIT 195

Query: 185 LK 186
           L 
Sbjct: 196 LD 197


>gi|59275960|dbj|BAD89547.1| proteasome subunit [Oncorhynchus mykiss]
 gi|225704848|gb|ACO08270.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
          Length = 217

 Score = 95.4 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      S E+        +S+A      +     L T+
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEK 199


>gi|19074754|ref|NP_586260.1| PROTEASOME B-TYPE SUBUNIT DELTA CHAIN [Encephalitozoon cuniculi
           GB-M1]
 gi|74664171|sp|Q8SR11|PSB6_ENCCU RecName: Full=Probable proteasome subunit beta type-6; AltName:
           Full=26S proteasome beta-type subunit PRE3; AltName:
           Full=Multicatalytic endopeptidase complex subunit PRE3;
           Flags: Precursor
 gi|19069396|emb|CAD25864.1| PROTEASOME B-TYPE SUBUNIT DELTA CHAIN [Encephalitozoon cuniculi
           GB-M1]
          Length = 203

 Score = 95.4 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 11/192 (5%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +M ++    +M  TTI+ ++ D  V+I  D + S+G  V      K+ ++     +   +
Sbjct: 1   MMSNEK---EMTGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVC-RS 56

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----LIADKTIT 118
           GSSAD   +   L   L  Y                  K +    +++    +       
Sbjct: 57  GSSADTQMISSYLRMYLSMYSQLEDSIPQVQRAAALASKIIYENPSLLAGLIVAGYDDKP 116

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            V          E      GSG ++          +  S EE     R A+S A +    
Sbjct: 117 RVFNISLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAINRDNA 176

Query: 176 TNHNIVLETLKV 187
           +   I +  +  
Sbjct: 177 SGGCIRMSAISR 188


>gi|225714644|gb|ACO13168.1| Proteasome subunit beta type-1 precursor [Lepeophtheirus salmonis]
          Length = 238

 Score = 95.4 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 61/208 (29%), Gaps = 21/208 (10%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M          + +  T + +     VVIA D ++     ++  +  KV  LG  +++ G
Sbjct: 20  MNPHQVSFQPYQDNGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVL-G 78

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +G   D  T +   E +++ Y     +     A    +   L                 
Sbjct: 79  ASGCWCDVLTFVRVAESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGL 138

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---------QNSAEE--- 160
            D+    + T        +  +   G+           ++             S +E   
Sbjct: 139 DDEGRGAIFTYDPVGHCEKVKISCGGASMEMIQPILDNVIEKKNMTNAELVDLSIDETVN 198

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVG 188
           I       AA+  + T   +V + +   
Sbjct: 199 IVHDCFISAAERQIQTGDGVVFKIITKD 226


>gi|70954344|ref|XP_746223.1| proteasome subunit beta type 1 [Plasmodium chabaudi chabaudi]
 gi|56526764|emb|CAH76320.1| proteasome subunit beta type 1, putative [Plasmodium chabaudi
           chabaudi]
          Length = 252

 Score = 95.4 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 72/207 (34%), Gaps = 30/207 (14%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  T++ +     V++AGD ++SL  ++   N  K+ ++     I G +G  +D 
Sbjct: 33  NPYVDNGGTVIGLTGKDYVILAGDTRLSLSYSIYTRNCPKISKITD-KCIIGSSGMQSDI 91

Query: 69  FTLLERLE----KKLEQYP--------NQLLRSSVELAKDWRMDKYLRNLEAM-----IL 111
            TL   L+    KKL ++         +    S   +AK   +  Y R          + 
Sbjct: 92  KTLHSLLQVCYSKKLRKHKKIQLFYLEHSHYPSVHVIAKLLCVTLYSRRFFPYYTFNILA 151

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------TQNS---AEEI 161
             D+     + +        ++     GSG S  L      +               ++I
Sbjct: 152 GIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRVEQKNQLIKNMDFNLGDDI 211

Query: 162 --ARKAMSIAADICVYTNHNIVLETLK 186
              + AM+ A +  +YT     +  + 
Sbjct: 212 NFVKDAMTSATERDIYTGDQAEIYIID 238


>gi|221508035|gb|EEE33622.1| proteasome component PRE3 precursor / proteasome subunit beta type
           6 precursor, putative [Toxoplasma gondii VEG]
          Length = 245

 Score = 95.4 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 70/186 (37%), Gaps = 13/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V   G VV+  D + S G  V+   ARK+ R+ +   +   +GS+AD   + + 
Sbjct: 45  GTTIVAVSFKGGVVLGADTRTSAGSYVVNRAARKISRVHERICVC-RSGSAADTQAVTQI 103

Query: 75  LEKKLEQYPNQLLR--SSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMG 125
           ++  ++QY  +L +       A          ++   L A +++A         +     
Sbjct: 104 VKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHKDALTAGLIVAGFDKVKGGQIYALPL 163

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                     A GSG ++  +   A      +   A  + + +++ A      +   + +
Sbjct: 164 GGALVPMQYTAGGSGSAFISAYMDANFKQNMTQQEAVNLVKNSVAYAISRDGSSGGMVRV 223

Query: 183 ETLKVG 188
             +   
Sbjct: 224 VVITED 229


>gi|70923607|ref|XP_734786.1| 20S proteasome beta subunit [Plasmodium chabaudi chabaudi]
 gi|56507845|emb|CAH78065.1| 20S proteasome beta subunit, putative [Plasmodium chabaudi
           chabaudi]
          Length = 205

 Score = 95.4 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 11/171 (6%)

Query: 22  RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
           +    +++A D + S+G  +   N  K+  + K  I+   AG +AD F   + L + ++ 
Sbjct: 1   KFKEGIIVAVDSRASMGSFISSQNVEKIIEINKH-ILGTMAGGAADCFYWEKYLGQIIKI 59

Query: 82  YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPENGV 134
           Y  +        A    +   L   +   L         D T   +     +  + E  +
Sbjct: 60  YELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSGYDHTGFNMFYIDDEGKKVEGNL 119

Query: 135 MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
            + GSG +YA S          S   A E+ R A+  A      +   + +
Sbjct: 120 FSCGSGSTYAYSILDTAYDYNLSVEEAVELGRNAIYHATFRDGGSGGKVRV 170


>gi|167522269|ref|XP_001745472.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775821|gb|EDQ89443.1| predicted protein [Monosiga brevicollis MX1]
          Length = 211

 Score = 95.4 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 69/186 (37%), Gaps = 15/186 (8%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M ++G     ++ + + ++ +   G + IA D ++      +  + +K+ ++G   +  G
Sbjct: 1   MHLLGAMQSIMEYNGSAMVAMTGKGCIAIAADRRLGAQAQTVATDFQKLFQMGP-TLFVG 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIA 113
             G + D  T  +RL  KL+ Y  +  R     A    +   L         +E +I   
Sbjct: 60  LPGLATDVQTFSQRLTFKLKLYKLREERDIEPKALTNLISSMLYEKRFGPYFIEPLIAGL 119

Query: 114 DKT-ITLVITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMS 167
           DK     V +    G  +E  +  +  G+          +L       +E+     +A+ 
Sbjct: 120 DKDGQPYVASTDVIGCPMETTD-FVVGGTSSDQLFGMCESLYKPNMEPDELFEVVSQALL 178

Query: 168 IAADIC 173
            A D  
Sbjct: 179 NAQDRD 184


>gi|59275971|dbj|BAD89557.1| proteasome subunit [Oncorhynchus mykiss]
          Length = 217

 Score = 95.4 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      S E+        +S+A      +     L T+
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEK 199


>gi|10803373|emb|CAC13120.1| low molecular mass polypeptide subunit PSMB9 [Takifugu rubripes]
          Length = 216

 Score = 95.4 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 10/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  D  VV+  D +VS G+ V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 17  GTTIIAVEFDDGVVLGSDSRVSAGKAVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEI 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +  +L+ +  ++    +  +    +       +  ++        DK     +    + L
Sbjct: 76  VNYQLDVHSVEIGEDPLVRSAANLVKNISYKYKEELMAHLIVAGWDKRKGGQVFATLNGL 135

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      S EE        +S+A +    +     + T+
Sbjct: 136 LTRQPFAVGGSGSSYVYGFVDAEYRKGMSKEEAQQFVVNTLSLAMNRDGSSGGVAYIVTI 195

Query: 186 KVGD 189
              +
Sbjct: 196 DEHN 199


>gi|290562593|gb|ADD38692.1| Proteasome subunit beta type-1 [Lepeophtheirus salmonis]
          Length = 238

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 61/208 (29%), Gaps = 21/208 (10%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M          + +  T + +     VVIA D ++     ++  +  KV  LG  +++ G
Sbjct: 20  MNPHQVSFQPYQDNGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVL-G 78

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +G   D  T +   E +++ Y     +     A    +   L                 
Sbjct: 79  ASGCWCDVLTFIRVAESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGL 138

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---------QNSAEE--- 160
            D+    + T        +  +   G+           ++             S +E   
Sbjct: 139 DDEGRGAIFTYDPVGHCEKVKISCGGASMEMIQPILDNVIEKKNMTNAELVDLSIDETVN 198

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVG 188
           I       AA+  + T   +V + +   
Sbjct: 199 IVHDCFISAAERQIQTGDGVVFKIITKD 226


>gi|255078980|ref|XP_002503070.1| predicted protein [Micromonas sp. RCC299]
 gi|226518336|gb|ACO64328.1| predicted protein [Micromonas sp. RCC299]
          Length = 237

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 15/185 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VV+  D + S G  V    + K+ ++     +   +GS+AD   +   
Sbjct: 22  GTTIMACVYDGGVVLGADSRTSTGNYVANRASDKITQVMDNVWMC-RSGSAADTQNVCAF 80

Query: 75  LEKKLEQY--------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITG 123
           ++  +E++        P       V         +    L A ++IA         V   
Sbjct: 81  VKNAVEEHGIMSGSDEPGMADVKLVANVTMQIAYRNKDRLSAGMIIAGWDRRAGPQVFGI 140

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNI 180
                  +      GSG +Y             S EE     R+A+SIA      +   I
Sbjct: 141 PLGGSLEKCDFTLGGSGSAYITGFCDDTWKPGMSREEAEAWIRRAISIAISRDASSGGVI 200

Query: 181 VLETL 185
            L T+
Sbjct: 201 RLVTI 205


>gi|156849065|ref|XP_001647413.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156118099|gb|EDO19555.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 205

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 56/195 (28%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++   ++ +     V IA D ++      +  N  K+   G   +  G  G + 
Sbjct: 1   MSDPSSINGGIVVAMTGKDCVAIACDLRLGNQSLGVSNNFEKIFHYGH--VFLGITGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  +  R                + R   Y        + +    
Sbjct: 59  DVLTLSEEFRYKTNLYKLREDRLIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L      AE++     +A+  AAD  
Sbjct: 119 PFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQALLNAADRD 178

Query: 174 VYTNHNIVLETLKVG 188
             +    V+  +K  
Sbjct: 179 ALSGWGAVVYIIKKD 193


>gi|222144262|ref|NP_001138404.1| proteasome subunit beta type-5 isoform 3 [Homo sapiens]
 gi|194374157|dbj|BAG62391.1| unnamed protein product [Homo sapiens]
          Length = 203

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 1/113 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 57  LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 115

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L     I        
Sbjct: 116 RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGP 168


>gi|306494799|gb|ADM95871.1| PSMB9 [Oncorhynchus mykiss]
          Length = 217

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      S E+        +S+A      +     L T+
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEK 199


>gi|62204261|gb|AAH92699.1| Psmb6 protein [Danio rerio]
          Length = 232

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 32  GTTIMAVEFDGGVVMGADSRATTGAYIANRVTDKLTPIHDRIFCC-RSGSAADTQAIADA 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L  + +                  ++               V T     
Sbjct: 91  VTYQLGFHSIELDEAPLVQTAASLFRDMCYRYREELMAGIIVAGWDRRRGGQVYTVPVGG 150

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +     V   GSG SY      +   +  S EE  +    A+++A +    +   + L  
Sbjct: 151 MLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLAMERDGSSGGVVRLAV 210

Query: 185 L 185
           +
Sbjct: 211 I 211


>gi|290993280|ref|XP_002679261.1| predicted protein [Naegleria gruberi]
 gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]
          Length = 205

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 64/205 (31%), Gaps = 24/205 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +   I+ +     V IA D +  + Q  +  + +K+ ++     I G  G + D 
Sbjct: 2   SILEYNGAGIVAMTGKNCVAIAADTRYGIRQQTVGTDMQKIFKIHDKLFI-GLNGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTITL 119
            T+ E+L+ ++  Y  +  R     +    M   L                L   +    
Sbjct: 61  QTVNEKLKFRMNMYNLKEERDIKPSSFANLMSNILYEKRFGPWFIEPVIAGLEGPENKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC-- 173
           +            +  +  G+          +L       E++     + +  A D    
Sbjct: 121 ICAQDLIGAPCFTDNFVVSGTCSEALYGMCESLYKPDMEPEDLFEVISQCLLAAVDRDCI 180

Query: 174 --------VYTNHNIVLETLKVGDE 190
                   V T  +I  + LKV  +
Sbjct: 181 SGWGAVVHVITPDSITTKRLKVRQD 205


>gi|224473831|gb|ACN49170.1| antigen processing proteasome-associated protein [Oryzias
           luzonensis]
          Length = 216

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  +G VV+  D +VS G +V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 17  GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEM 75

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  D+     +      L
Sbjct: 76  VNYQLDVHSLEIGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQVFATLGGL 135

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE        +++A +    +     + T+
Sbjct: 136 LTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTI 195

Query: 186 KVG 188
              
Sbjct: 196 DEH 198


>gi|185133857|ref|NP_001117174.1| proteasome subunit beta type-9 precursor [Salmo salar]
 gi|185136351|ref|NP_001117186.1| proteasome subunit beta type-9 precursor [Salmo salar]
 gi|21263915|sp|Q9DD33|PSB9_SALSA RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
           molecular mass protein 2; Flags: Precursor
 gi|12003001|gb|AAG43434.1|AF184932_1 low molecular mass protein 2 [Salmo salar]
 gi|12003003|gb|AAG43435.1|AF184933_1 low molecular mass protein 2 [Salmo salar]
 gi|12003005|gb|AAG43436.1|AF184934_1 low molecular mass protein 2 [Salmo salar]
 gi|12003007|gb|AAG43437.1|AF184935_1 low molecular mass protein 2 [Salmo salar]
 gi|12003009|gb|AAG43438.1|AF184936_1 low molecular mass protein 2 [Salmo salar]
 gi|146147388|gb|ABQ01991.1| proteosome subunit beta type 9 [Salmo salar]
 gi|148362122|gb|ABQ59649.1| PSMB9 [Salmo salar]
 gi|148362160|gb|ABQ59682.1| PSMB9 [Salmo salar]
 gi|209733640|gb|ACI67689.1| Proteasome subunit beta type-9 precursor [Salmo salar]
 gi|209734580|gb|ACI68159.1| Proteasome subunit beta type-9 precursor [Salmo salar]
 gi|262189357|gb|ACY30375.1| PSMB9 [Salmo salar]
          Length = 217

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S E+        +S+A      +     L T+
Sbjct: 137 LSRQPFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEK 199


>gi|328850577|gb|EGF99740.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
          Length = 220

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 58/186 (31%), Gaps = 12/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  +G VVI  D + + G  +      K+  +    +    +GS+AD   + + 
Sbjct: 18  GTSIMAVAFNGGVVIGADSRTTSGSYIANRVTDKLTHIHD-RVYCCRSGSAADTQAVADY 76

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGMGD 126
           +    + Y  +   +           +   + +  +                 V      
Sbjct: 77  VHLYCQMYTMEHGHAPSVHTVGTLFQQICYSNKDNLSAGIIVAGWDSQLKNGSVYNIPLG 136

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLE 183
               +      GSG +Y      +      S E   E  R A+++A      +   I + 
Sbjct: 137 GGIFQQPWAIGGSGSTYIYGYCDSNYREGWSKEETVEFVRNALALAMSRDGSSGGTIRMA 196

Query: 184 TLKVGD 189
            +   +
Sbjct: 197 IITEDN 202


>gi|268554105|ref|XP_002635040.1| C. briggsae CBR-PBS-1 protein [Caenorhabditis briggsae]
          Length = 242

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 63/183 (34%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ +  +G VV+  D + S G  +      K+  +    ++   +GS+AD   + + 
Sbjct: 26  GTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVC-RSGSAADTQAIADI 84

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE------AMILIADKTITL-VITGMGDV 127
            +  ++ Y     +            ++L N         ++   D  +   V       
Sbjct: 85  AKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDSELGGQVYAIPIGG 144

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
                   A GSG ++      +      + EE   I ++A+ +A      +   + L  
Sbjct: 145 FVSRQRSTASGSGSTFVQGFLDSQWRPDLTLEECKAIVKQAVGLATFRDGSSGGVVRLAV 204

Query: 185 LKV 187
           +  
Sbjct: 205 IDK 207


>gi|2055311|dbj|BAA19766.1| LMP2 [Oryzias latipes]
          Length = 213

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  +G VV+  D +VS G +V+     K+  L      A  +GS+ADA T+ E 
Sbjct: 14  GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDRIYCA-LSGSAADAQTIAEM 72

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  D+     +      L
Sbjct: 73  VNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQVFATLGGL 132

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE        +++A +    +     + T+
Sbjct: 133 LTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTI 192

Query: 186 KVG 188
              
Sbjct: 193 DEH 195


>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
 gi|302595701|sp|A0RU86|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
          Length = 193

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF-TL 71
           M   T + +   G V++A + +++ G  ++  N RK  ++      A     +     +L
Sbjct: 1   MPGATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSL 60

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----LIADKTITLVITGMGDV 127
                 K+ +   +       +AK      Y R    ++    +        + T     
Sbjct: 61  QISALAKIRKMDLKRDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGVVGEPAIYTLDSLG 120

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
               +   A+G+G   AL        +  S   A ++A + +  AA    ++   + +  
Sbjct: 121 SVLPDEYAAVGTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAALRDSFSGDGLDILA 180

Query: 185 LKVG 188
           L   
Sbjct: 181 LDAN 184


>gi|167521337|ref|XP_001745007.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776621|gb|EDQ90240.1| predicted protein [Monosiga brevicollis MX1]
          Length = 216

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 11/184 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TTI+ V     VVI  D + + G  V      K+ ++         +GS+AD   + 
Sbjct: 14  LTGTTIMAVEFADGVVIGADSRTTTGSYVANRVTDKLTKITDNIYCC-RSGSAADTQAIA 72

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-------KTITLVITGMG 125
           + +   L+ +  ++               +  N    ++          K    V +   
Sbjct: 73  DIVRYYLDLHSMEMDEDPEVHTAASVFRTFCYNNRESLMAGIICAGWDKKKGGQVYSIPL 132

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVL 182
             L         GSG ++      A      + +E     R A+++A      +   I  
Sbjct: 133 GGLLVRQPFSIGGSGSTFLYGHCDASYKENMTKDECLKFVRTALALAMSRDGSSGGVIRT 192

Query: 183 ETLK 186
             + 
Sbjct: 193 AVIT 196


>gi|182891064|gb|AAI65062.1| Psmb6 protein [Danio rerio]
          Length = 223

 Score = 95.1 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 23  GTTIMAVEFDGGVVMGADSRATTGAYIANRVTDKLTPIHDRIFCC-RSGSAADTQAIADA 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L  + +                  ++               V T     
Sbjct: 82  VTYQLGFHSIELDEAPLVQTAASLFRDMCYRYREELMAGIIVAGWDRRRGGQVYTVPVGG 141

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +     V   GSG SY      +   +  S EE  +    A+++A +    +   + L  
Sbjct: 142 MLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLAMERDGSSGGVVRLAV 201

Query: 185 L 185
           +
Sbjct: 202 I 202


>gi|66358282|ref|XP_626319.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
 gi|46228005|gb|EAK88925.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
          Length = 248

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ ++    +V+A DG+ S G  +    ARK+ ++    +    +GS+AD   +   
Sbjct: 51  GTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKITQITD-KVFMCRSGSAADTQIISRY 109

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           + + ++ +  +    +   +          +   +L A ++IA         V       
Sbjct: 110 VRRIVQDHELETGEDTKVKSVASVARLISYQNKEHLLADMIIAGMDPNGEFKVFRIPLGG 169

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              E      GSG  Y  S   +   ++   +E    AR  +S A      +   I +  
Sbjct: 170 TLIEGSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDSSSGGIIRIIV 229

Query: 185 LKV 187
           +  
Sbjct: 230 INK 232


>gi|325003202|ref|ZP_08124314.1| 20S proteasome beta-type subunit [Pseudonocardia sp. P1]
          Length = 263

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 19/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTI+       V++AGD + + G  + + +  KV  +   +  AGFAGS   A  +L+
Sbjct: 38  HGTTIIAFTWADGVLLAGDRRATSGNVIAQKDLVKVMAIDDTSA-AGFAGSVGHALLMLK 96

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP--- 130
               ++EQY         +  K  R+   +R      +     + L +       +P   
Sbjct: 97  MFAAEVEQYEKVEGSPISQDGKIRRLSTVVRENLGAAMQGFVALPLFVGYDPADADPARI 156

Query: 131 ------------ENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                        +G  +IGSG  +A ++ + L         A  +A  A+
Sbjct: 157 VTFDPSGSIARNRSGYTSIGSGSYFAEASLKKLHRPDTDRSGAISLAVNAL 207


>gi|328785087|ref|XP_624958.3| PREDICTED: proteasome subunit beta type-3-like [Apis mellifera]
          Length = 205

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 64/205 (31%), Gaps = 24/205 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ ++    V IA D +  +    +  + +K+  +G    ++   G + D 
Sbjct: 2   SILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLS-LPGLATDT 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------DKTITL 119
            T++E+L  +L  Y  +  R     A    +   L                   +     
Sbjct: 61  QTVMEKLRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLNPNTYEPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           +        + P N  +  G+          +L       +++     +A+  A D    
Sbjct: 121 ICNMDLIGCISPSNDFVVGGTCTEQLYGMCESLYEPDMEPDDLFETISQALVNACDRDAI 180

Query: 176 TN----------HNIVLETLKVGDE 190
           +             I ++TLK   +
Sbjct: 181 SGWGAIVYIIEKDKITVKTLKTRMD 205


>gi|21263862|sp|Q8UW64|PSB9_ORYLA RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
           molecular mass protein 2; Flags: Precursor
 gi|18478982|dbj|BAB84548.1| PSMB9 [Oryzias latipes]
 gi|62122593|dbj|BAD93261.1| PSMB9 [Oryzias latipes]
 gi|295901494|dbj|BAJ07258.1| proteasome subunit, beta type 9 [Oryzias latipes]
 gi|295901520|dbj|BAJ07277.1| proteasome subunit, beta type 9 [Oryzias latipes]
 gi|295901524|dbj|BAJ07279.1| proteasome subunit, beta type 9 [Oryzias latipes]
          Length = 217

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  +G VV+  D +VS G +V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  D+     +      L
Sbjct: 77  VNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQVFATLGGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE        +++A +    +     + T+
Sbjct: 137 LTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEH 199


>gi|58220850|dbj|BAB83845.1| PSMB9 [Oryzias latipes]
 gi|295901522|dbj|BAJ07278.1| proteasome subunit, beta type 9 [Oryzias latipes]
          Length = 216

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  +G VV+  D +VS G +V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 17  GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEM 75

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  D+     +      L
Sbjct: 76  VNYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQVFATLGGL 135

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE        +++A +    +     + T+
Sbjct: 136 LTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTI 195

Query: 186 KVG 188
              
Sbjct: 196 DEH 198


>gi|21263928|sp|Q9PT26|PSB9_ONCMY RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
           molecular mass protein 2; Flags: Precursor
 gi|5823094|gb|AAD53038.1|AF115541_1 low molecular mass protein 2 [Oncorhynchus mykiss]
          Length = 217

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY  +L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEDLSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      S E+        +S+A      +     L T+
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEK 199


>gi|45361029|ref|NP_989151.1| proteasome beta 6 subunit [Xenopus (Silurana) tropicalis]
 gi|38494336|gb|AAH61603.1| proteasome (prosome, macropain) subunit, beta type, 6 [Xenopus
           (Silurana) tropicalis]
 gi|89266723|emb|CAJ83898.1| proteasome (prosome macropain) subunit beta type 6 [Xenopus
           (Silurana) tropicalis]
          Length = 233

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 33  GTTIMAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCC-RSGSAADTQAIADA 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L    +         +        ++               V T     
Sbjct: 92  VTYQLGFHSIELDGLPLVHTAANLFKEMCYRYREDLMAGIIVAGWDKRKGGQVYTVPMGG 151

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG SY      +   +  + EE  +    A+++A +    +   I L  
Sbjct: 152 MMVHQPFSIGGSGSSYIYGFVDSTYRSGMTKEECLKFTANALALAMERDGSSGGVIRLAA 211

Query: 185 LK 186
           + 
Sbjct: 212 IT 213


>gi|296004560|ref|XP_002808699.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
           3D7]
 gi|225631686|emb|CAX63970.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
           3D7]
          Length = 240

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 20/197 (10%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               +  T++ +     V++A D ++SL  ++      K+ +L     I G +G  +D  
Sbjct: 32  PYIDNGGTVIGLTGKDYVILAADTRLSLSYSIYTRFCPKISKLTD-KCIIGSSGMQSDIK 90

Query: 70  TLLERLEKK-----LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           TL   L+KK     LE      +     L       +      A  ++A        ++ 
Sbjct: 91  TLHSLLQKKIQLFVLEHSHYPDIHVIARLLCVILYSRRFFPYYAFNILAGVDENNKGVLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----------SAEEIARKAMSIAA 170
                    E     +GSG    L      +  +N                 + A++ A 
Sbjct: 151 NYDSVGSYCEATHSCVGSGSQLILPILDNRVEQKNQLIKNTNFNLGDDINFVKDAITSAT 210

Query: 171 DICVYTNHNIVLETLKV 187
           +  +YT    ++  +  
Sbjct: 211 ERDIYTGDKTLIYVIDK 227


>gi|302771876|ref|XP_002969356.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
 gi|300162832|gb|EFJ29444.1| hypothetical protein SELMODRAFT_227897 [Selaginella moellendorffii]
          Length = 239

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 1   MVVMGDKHYAVKMH--ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           M +  D  +    H   TTI+ V     VV+  D + + G  V    + K+ +L     I
Sbjct: 1   MALSDDSSWMTAAHSMGTTIIGVEYADGVVLGADSRTTTGIYVANRASDKISKLTDNVYI 60

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI-------L 111
              +GS+AD   + + +   L Q+   L   +   A    + +   + ++ +        
Sbjct: 61  C-RSGSAADTQVISDYVRYLLHQHTIVLGEQATVKAAAKLVREIAYSNKSFLEAGMIVGG 119

Query: 112 IADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
                   +                 GSG +Y             S   A+++  KA+S+
Sbjct: 120 WDKHEKGSIFGVPIGGTLLRVPFTIGGSGSTYIFGFLDQAWRPGMSKQEAQDLVVKAVSL 179

Query: 169 AADICVYTNHNIVLETL 185
           A      +   +   T+
Sbjct: 180 AMARDGGSGGVVRTVTI 196


>gi|258588387|pdb|3H6F|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588389|pdb|3H6F|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588391|pdb|3H6F|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588392|pdb|3H6F|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588394|pdb|3H6F|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588396|pdb|3H6F|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588398|pdb|3H6F|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588400|pdb|3H6F|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588402|pdb|3H6F|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588404|pdb|3H6F|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588406|pdb|3H6F|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588408|pdb|3H6F|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588410|pdb|3H6F|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588412|pdb|3H6F|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Ht1171
 gi|258588415|pdb|3H6I|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588417|pdb|3H6I|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588419|pdb|3H6I|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588420|pdb|3H6I|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588422|pdb|3H6I|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588424|pdb|3H6I|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588426|pdb|3H6I|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588428|pdb|3H6I|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588430|pdb|3H6I|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588432|pdb|3H6I|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588434|pdb|3H6I|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588436|pdb|3H6I|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588438|pdb|3H6I|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588440|pdb|3H6I|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Modified By Inhibitor Gl1
 gi|258588478|pdb|3HF9|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588479|pdb|3HF9|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588480|pdb|3HF9|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588481|pdb|3HF9|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588482|pdb|3HF9|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588483|pdb|3HF9|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588484|pdb|3HF9|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588485|pdb|3HF9|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588486|pdb|3HF9|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588487|pdb|3HF9|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588488|pdb|3HF9|V Chain V, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588489|pdb|3HF9|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588490|pdb|3HF9|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588491|pdb|3HF9|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588492|pdb|3HF9|HH Chain h, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588493|pdb|3HF9|CC Chain c, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588494|pdb|3HF9|EE Chain e, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588495|pdb|3HF9|GG Chain g, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588496|pdb|3HF9|JJ Chain j, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588497|pdb|3HF9|LL Chain l, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588498|pdb|3HF9|NN Chain n, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588499|pdb|3HF9|PP Chain p, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588500|pdb|3HF9|RR Chain r, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588501|pdb|3HF9|TT Chain t, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588502|pdb|3HF9|VV Chain v, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588503|pdb|3HF9|XX Chain x, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588504|pdb|3HF9|ZZ Chain z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|258588505|pdb|3HF9|4 Chain 4, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant Modified By Inhibitor Gl1
 gi|299689164|pdb|3MFE|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689165|pdb|3MFE|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689166|pdb|3MFE|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689168|pdb|3MFE|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689169|pdb|3MFE|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689170|pdb|3MFE|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689171|pdb|3MFE|P Chain P, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689172|pdb|3MFE|R Chain R, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689173|pdb|3MFE|T Chain T, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689175|pdb|3MFE|X Chain X, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689176|pdb|3MFE|Z Chain Z, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
 gi|299689177|pdb|3MFE|2 Chain 2, Crystal Structure Of Mycobacterium Tuberculosis Proteasome
           Open-Gate Mutant With H0 Movement
          Length = 240

 Score = 94.3 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 67/183 (36%), Gaps = 22/183 (12%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TI+ ++  G VV+AGD + + G  +   + RKV          G AG++A A        
Sbjct: 2   TIVALKYPGGVVMAGDRRSTQGNMISGRDVRKVYITDDYTA-TGIAGTAAVAVEFARLYA 60

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM------------ 124
            +LE Y            K  R+   +R   A  +     + L+                
Sbjct: 61  VELEHYEKLEGVPLTFAGKINRLAIMVRGNLAAAMQGLLALPLLAGYDIHASDPQSAGRI 120

Query: 125 ------GDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVY 175
                 G     E G  A+GSG  +A S+ + L S     +S   +A +A+  AAD    
Sbjct: 121 VSFDAAGGWNIEEEGYQAVGSGSLFAKSSMKKLYSQVTDGDSGLRVAVEALYDAADDDSA 180

Query: 176 TNH 178
           T  
Sbjct: 181 TGG 183


>gi|156539935|ref|XP_001599218.1| PREDICTED: similar to proteasome beta 3 subunit [Nasonia
           vitripennis]
          Length = 205

 Score = 94.3 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 64/193 (33%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ ++    V IA D +  +    +  N +K+  +G    + G  G + D+
Sbjct: 2   SILAYNGGAIIAMKGKNCVAIAADRRFGIQAQTISCNFQKIYEMGPHLYL-GLPGLATDS 60

Query: 69  FTLLERLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTITL 119
            T++ERL  +L  Y  +  R+            L  + R   Y        L  +     
Sbjct: 61  QTVMERLRFRLNLYELKESRTIHPKTFGSMISNLLYERRFGPYFVEPIVAGLDPETFEPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           +        L      +  G+          AL      A+++     +A+  A D    
Sbjct: 121 ICNMDLIGCLNLPEDFVVGGTCSEQLYGMCEALYEPNLDADDLFETISQALVNACDRDAI 180

Query: 176 TNHNIVLETLKVG 188
           +    ++  ++  
Sbjct: 181 SGWGAIVHIIEKD 193


>gi|195568346|ref|XP_002102177.1| GD19639 [Drosophila simulans]
 gi|194198104|gb|EDX11680.1| GD19639 [Drosophila simulans]
          Length = 322

 Score = 94.3 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 77/184 (41%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ +  DG V+I  + + ++G  ++    RK+  L      AG AG++ D   L+E 
Sbjct: 49  GTTVVGIVFDGGVIIGAESKAAIGSMILSKTIRKIVELQSNIFAAG-AGTARDTKALVEL 107

Query: 75  LEKKLEQYPNQLLRSSVELAKDW-----RMDKYLRNLEAMILI--ADKTITLVITGMGDV 127
              +LE +        V +          + +Y RN++A ++I  AD +   +     D 
Sbjct: 108 TRAQLELHRMNTGFRKVPVCCANQMIRQLLFRYNRNIDADMIIGGADSSGAHLFCTRSDG 167

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAADI--CVYTNHNIVLET 184
                   ++GSG   ++S   +  S   S E   A    ++AA +   + +   + L  
Sbjct: 168 STDTAPFASLGSGYLVSMSILESRWSEDLSEESACALACDAVAAGMKNDLSSGGQVSLCV 227

Query: 185 LKVG 188
           ++  
Sbjct: 228 VRCD 231


>gi|209737824|gb|ACI69781.1| Proteasome subunit beta type-9 precursor [Salmo salar]
 gi|209738640|gb|ACI70189.1| Proteasome subunit beta type-9 precursor [Salmo salar]
          Length = 217

 Score = 94.3 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S E+        +S+A      +     L T+
Sbjct: 137 LSRQSFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEK 199


>gi|115712731|ref|XP_790345.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115975664|ref|XP_001195221.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 229

 Score = 94.3 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 38/170 (22%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  + +  VVIA D + + G  +   + +KV  +    ++   AG +AD     
Sbjct: 68  LHGTTTLGFKFEHGVVIAVDSRATAGPYIASQSVKKVIEINPY-LLGTMAGGAADCAFWE 126

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
             L ++   Y  +        A    +   L N + M L                L  E+
Sbjct: 127 RVLAEQCRIYELRNKERISVAAASKLLANMLYNYKGMGLSV------------WDLSVED 174

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
            ++                           ++A+  A     Y+   + L
Sbjct: 175 ALVMG-------------------------QRAIFHATHRDAYSGGVVNL 199


>gi|19074564|ref|NP_586070.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
 gi|74630117|sp|Q8SRH6|PSB1_ENCCU RecName: Full=Probable proteasome subunit beta type-1; AltName:
           Full=26S proteasome beta-type subunit PRE7; AltName:
           Full=Multicatalytic endopeptidase complex subunit PRE7
 gi|19069206|emb|CAD25674.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
          Length = 290

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 19/201 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           ++    + ++ T + +++   +V+AGD + S    +      K+ ++G    +    G  
Sbjct: 81  ERFDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDF--LLTGTGFY 138

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLV 120
           AD   +  ++  ++ QY      +    A       Y +              +K    V
Sbjct: 139 ADTHEVYVKMVYEIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVLSGFEKGKPYV 198

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---------TQNSAEE---IARKAMSI 168
            +            +  GSG S       + +          TQ S E+   +  KA + 
Sbjct: 199 YSYDPIGSFGSVTCVCSGSGRSMIQPLLDSFIDKKNWNNAEETQLSQEDCIRLVVKAFNS 258

Query: 169 AADICVYTNHNIVLETLKVGD 189
           AA+  V T  N+ +  ++   
Sbjct: 259 AAERDVKTKDNLEVCVMRENQ 279


>gi|91983309|gb|ABE68720.1| 20S proteasome beta subunit [Arachis hypogaea]
          Length = 223

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 55/175 (31%), Gaps = 20/175 (11%)

Query: 27  VVIAG---------DGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           VV+A              S+G  +   + +K+  +    ++   AG +AD       L  
Sbjct: 9   VVMAAAGFRLADTFHTGASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHRNLGI 67

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLEP 130
           K   +     R          +   L +   M L         D+T   +     +    
Sbjct: 68  KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRL 127

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
           +    ++GSG  YA     +      S   A E+ R+A+  A      +   + +
Sbjct: 128 KGTRFSVGSGSPYAYGILDSGYRYDLSVDEAVELGRRAIYHATFRDGASGGVVSV 182


>gi|18859277|ref|NP_571753.1| proteasome beta 9b subunit [Danio rerio]
 gi|5833463|gb|AAD53520.1|AF155580_1 proteasome subunit beta 9B [Danio rerio]
          Length = 227

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G +V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 17  GTTIIAVEFDGGVVVGSDSRVSAGASVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEI 75

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++    +  +          KY   L A +++A  D+     +      L
Sbjct: 76  VNYQLDVHSIEVDEDPLVCSAATLVKNISYKYKEELSAHLIVAGWDRREGGQVYATLSGL 135

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG  Y      A      + +E       ++S+A      +     L T+
Sbjct: 136 LTRQPFAVGGSGSFYIYGFVDAEYRAGMTKKECQEFVINSLSLAMGRDGSSGGVAYLVTI 195

Query: 186 KVG 188
              
Sbjct: 196 DSE 198


>gi|219115083|ref|XP_002178337.1| proteasome beta subunit [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410072|gb|EEC50002.1| proteasome beta subunit [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 225

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     VV+  D +VS G  V    + K+ ++    I A  +GS+AD   L + 
Sbjct: 24  GTTIMAIPTAEGVVLGADSRVSTGTYVANRVSDKIAQMSDH-IFACRSGSAADTQALTDY 82

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           ++  L+Q   +  R          M +     +  ++               V +     
Sbjct: 83  VKFYLQQLTVETGRPPRVKTAAHLMQRLCYENKDNLMAGVIVAGWDPVDGGSVYSIPLGG 142

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +      GSG +Y      +  +   S   A  + +KA+S A    
Sbjct: 143 TCLKVPFALSGSGSTYIYGLVDSEYNDSLSLQDARTLVKKAISHAMARD 191


>gi|301766158|ref|XP_002918479.1| PREDICTED: proteasome subunit beta type-10-like [Ailuropoda
           melanoleuca]
 gi|281340305|gb|EFB15889.1| hypothetical protein PANDA_006958 [Ailuropoda melanoleuca]
          Length = 273

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 58/182 (31%), Gaps = 14/182 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  + + +    V+  +  K+  +       G AG +ADA      
Sbjct: 39  GTTIAGLVFRDGVILGAETRATNDSVVIDKSCEKIHFIAPKIYCCG-AGVAADAEMTTRM 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
               +E +     R          + + L      +         D     + +      
Sbjct: 98  AASNMELHSLSTGREPRVATVTRVLRQTLFRYRGHVGASLIVGGVDLMGPQLYSVHPHGS 157

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLE 183
                  A+GSG   AL+             +A+E+  +A++  A I   + +  ++   
Sbjct: 158 YSRLPFTALGSGQDAALAVLEDRFQPNMRLEAAQELLVEAIT--AGILGDLGSGGSVDAC 215

Query: 184 TL 185
            +
Sbjct: 216 VI 217


>gi|225704850|gb|ACO08271.1| Proteasome subunit beta type 6 precursor [Oncorhynchus mykiss]
          Length = 212

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA   ++
Sbjct: 11  GTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCC-IAGSLADAQAAIK 69

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + ++  +  Q+    +  A               L+A  + A         V T    
Sbjct: 70  AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVALG 129

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +         GSG +Y    A A      S EE    A  A+++A      +     L 
Sbjct: 130 GMLLSQPFTIGGSGSTYIYGYADAKYKPDMSREECLQFATNALALAMGRDNVSGGVAHLV 189

Query: 184 TLKVG 188
            +   
Sbjct: 190 VITEE 194


>gi|14594931|emb|CAC43326.1| putative beta5 proteasome subunit [Nicotiana tabacum]
          Length = 174

 Score = 94.3 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 11/154 (7%)

Query: 35  VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELA 94
            S+G  +   + +K+  +    ++   AG +AD       L  K   +     R +    
Sbjct: 1   ASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHRNLGIKCRLHELANKRRTSVAG 59

Query: 95  KDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
               +   L +   M L         D+    +     +    +    ++GSG  YA   
Sbjct: 60  ASKLLANILYSYRGMGLSVGTMIAGWDEKGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGV 119

Query: 148 ARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
             +      S   A E+AR+A+  A      +  
Sbjct: 120 LDSGYRFDLSVEEAAELARRAIYHATFRDGASGG 153


>gi|294877016|ref|XP_002767869.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
           fold, putative [Perkinsus marinus ATCC 50983]
 gi|239869810|gb|EER00587.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
           fold, putative [Perkinsus marinus ATCC 50983]
          Length = 212

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 10/156 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ ++    VV+  D + S G  V    +RKV RL     +   +GS+AD   L  +
Sbjct: 54  GTTIMAMKFKDGVVLGADSRTSTGGYVANRVSRKVTRLHDRIFVC-RSGSAADTQFLSSK 112

Query: 75  LEKKLEQYPNQLL----RSSVELAKDWRM--DKYLRNLEAMILIADKTI---TLVITGMG 125
           ++  L  + N L           A   R+      + L A +++A         V +   
Sbjct: 113 VKYFLNAHANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLIVAGWDQTEGPQVYSIPL 172

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                +  +   GSG +Y       L     S  E+
Sbjct: 173 GGTIIKQNIATGGSGSTYITGLVDHLYRPDMSTGEL 208


>gi|299116145|emb|CBN76052.1| proteasome beta subunit [Ectocarpus siliculosus]
          Length = 249

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 31/214 (14%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
           G        +  T++ V      +IA D ++S G T++  N  +V RL     +A  AG 
Sbjct: 25  GAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLAT-AGC 83

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV---- 120
            AD   LL  LE  +  Y  +  R+    A    +  +L             +  +    
Sbjct: 84  WADTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEEG 143

Query: 121 ----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------------------- 155
                            V   G G S        L + +                     
Sbjct: 144 IGAVYGYDAVGSFERVRVACAGGGLSLMQPVLDRLDAAEAVTGAGGCGRAGREQPVVAVG 203

Query: 156 -NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
              A  + R+A     +  +     + +  +   
Sbjct: 204 LEEALALVRRAFVAGGERDISLGDEVEIVVVTRQ 237


>gi|312075453|ref|XP_003140423.1| proteasome A-type and B-type family protein [Loa loa]
 gi|307764412|gb|EFO23646.1| proteasome A-type and B-type family protein [Loa loa]
          Length = 277

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 18/183 (9%)

Query: 13  MHATTILTVRK-------DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +  TT L            G ++IA D + S G+ +   +  K+  +G   + A  AG +
Sbjct: 53  LKGTTTLAFIYEPKTPADKGGIIIAVDSRASAGEYISSKSVMKILDIGDRMV-ATMAGGA 111

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTIT 118
           AD       + K    Y  +        A        L +         +MI   DK   
Sbjct: 112 ADCQFWTRIVAKYCTLYELREKTEITVAAASKYFQNVLYSYRNHGLSVGSMIAGYDKRGP 171

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +     +    +  + +IGSG   A          + +   A ++ R+ +  A      
Sbjct: 172 AIFKVDSEGQRVQLRLCSIGSGSLSAYGILDNFYQPKMTDDEAYKLGRRGIMHATYRDTG 231

Query: 176 TNH 178
           +  
Sbjct: 232 SGG 234


>gi|149632325|ref|XP_001505328.1| PREDICTED: similar to proteasome subunit 10 [Ornithorhynchus
           anatinus]
          Length = 263

 Score = 93.9 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 10/175 (5%)

Query: 23  KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQY 82
               VV+  D + +    V   N  K+  +       G AG +ADA    + L   +E +
Sbjct: 37  GTDGVVLGADTRATDDMVVADKNCDKIHFIAPNIYCCG-AGVAADAEMTTQMLSSNIELH 95

Query: 83  PNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVLEPENGVMA 136
                R          + + L   +  I         D T   + +        +    A
Sbjct: 96  SLSTGRKPRLATVTRMLRQMLFRYQGHIGTSLIVGGVDITGPHLYSVSPYGSSQQLFFTA 155

Query: 137 IGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           +GSG   A++          + EE   +  +A++      + +  N+ L  +   
Sbjct: 156 MGSGQDAAIAILEDRFKPNMTLEEAQQLVAEAVTAGIMNDLGSGSNVDLCVITQE 210


>gi|194882671|ref|XP_001975434.1| GG22308 [Drosophila erecta]
 gi|190658621|gb|EDV55834.1| GG22308 [Drosophila erecta]
          Length = 224

 Score = 93.9 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 60/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ R+    +    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITD-KVYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  + NQ  + ++          Y  +    +L               V +     
Sbjct: 74  VAYSLNYHENQTNKEALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQRGGQVYSIPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R         EE     +KA+  A      +   + +  
Sbjct: 134 MLTRESCTIGGSGSSFIYGFVREHYRPNMQLEECVSFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKD 197


>gi|149047897|gb|EDM00513.1| proteasome (prosome, macropain) subunit, beta type 7 [Rattus
           norvegicus]
          Length = 295

 Score = 93.9 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 53/177 (29%), Gaps = 50/177 (28%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +                      
Sbjct: 107 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNI------------------ 148

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPEN 132
                                     +Y   + A +++   D T   + +        + 
Sbjct: 149 -------------------------YRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKL 183

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSIAADI--CVYTNHNIVLETL 185
             + +GSG   A++            EE A+K  + +IAA I   + +  NI L  +
Sbjct: 184 PYVTMGSGSLAAMAVFEDKFRPDMEEEE-AKKLVSEAIAAGIFNDLGSGSNIDLCVI 239


>gi|224473798|gb|ACN49142.1| proteasome beta 9 like subunit [Oryzias dancena]
          Length = 217

 Score = 93.9 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 65/183 (35%), Gaps = 12/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL    DG VVI  D + S+ G+ V      KV ++         AGS ADA  + +
Sbjct: 16  GTTILAAVFDGGVVIGSDSRASMGGEFVSSKTINKVIQVYDRIFCC-MAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGD 126
             + +L  +  Q+    + +A    +          L+A  + A         V      
Sbjct: 75  TAKFQLSFHSVQMENPPLVIAAASILKELCYNNKDELQAGFITAGWDKKKGPQVYVVSLG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +     V   GSG +Y      A      + EE    A  A+++A      +   + L 
Sbjct: 135 GMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVVNLV 194

Query: 184 TLK 186
            + 
Sbjct: 195 VIT 197


>gi|225709296|gb|ACO10494.1| Proteasome subunit beta type-9 precursor [Caligus rogercresseyi]
          Length = 217

 Score = 93.9 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG +Y             S E+        +S+A      +     L T+
Sbjct: 137 LSRQPFAVGGSGSAYVYGFVDVEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEK 199


>gi|2055301|dbj|BAA19761.1| proteasome subunit Y [Lethenteron japonicum]
          Length = 231

 Score = 93.9 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 11/186 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +  TTI+ V     VV   D + + G  V      K+  +         +GS+AD   + 
Sbjct: 29  LTGTTIMAVEFADGVVFGADSRTTSGSYVANRVTDKLTPVHDRIFCC-RSGSAADTQAIA 87

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMG 125
           + +  +L  +  ++    +          Y       ++               V T   
Sbjct: 88  DVVNYQLGFHSIEMEEMPLVHTAANLFKDYCYRYREELMAGIIVAGWDKRKGGQVYTVPL 147

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVL 182
             +         GSG +Y      +   T  + EE      KA+S+A      +   I +
Sbjct: 148 GGMLVRQPFSVGGSGSTYIYGFVDSNYKTGMTKEECMEFTAKALSLAMSRDGSSGGVIRM 207

Query: 183 ETLKVG 188
             +  G
Sbjct: 208 AAITAG 213


>gi|225719776|gb|ACO15734.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
          Length = 271

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 63/203 (31%), Gaps = 22/203 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T + +      VIA D +++ G   ++  N  KV +L + +++ G  G  
Sbjct: 58  SFQPYQDNGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVL-GSCGCW 116

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSS--VELAKDWRMDKYLRNLEAMILIA------DKTI 117
            D  T +  +E K++ Y     +      LA+      Y R      +        +   
Sbjct: 117 CDVLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLDENGQ 176

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM---------STQNSAEE---IARKA 165
             + T        +  +   G+           ++             + +E   +    
Sbjct: 177 GCIYTYDPVGCIEKVTMSCSGASMELIQPILDNIIDKKNMTNATKKDLTIDESVNLIHDC 236

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              A +  + T   I+ + +   
Sbjct: 237 FVSATERQISTGDGIIFKIITKD 259


>gi|195488383|ref|XP_002092291.1| GE14105 [Drosophila yakuba]
 gi|194178392|gb|EDW92003.1| GE14105 [Drosophila yakuba]
          Length = 224

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 60/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ R+    +    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITD-KVYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  + NQ  + ++          Y  +    +L               V +     
Sbjct: 74  VAYSLNYHENQTNKEALVFEAASEFRNYCYSYRESLLAGIIVAGWDAQRGGQVYSIPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R         EE     +KA+  A      +   + +  
Sbjct: 134 MLTRESCTIGGSGSSFIYGFVREHYRPNMQLEECVSFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKD 197


>gi|229367654|gb|ACQ58807.1| Proteasome subunit beta type-9 precursor [Anoplopoma fimbria]
          Length = 216

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 10/168 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  +G VV+  D +VS G +V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 17  GTTIIAIEFNGGVVLGSDSRVSAGASVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEI 75

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  D+     +      L
Sbjct: 76  VNYQLDVHSVEIDEDPQVRSAASLVRNISYKYKEELSAHLIVAGWDRRDGGQVFATLSGL 135

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
                    GSG SY      A      S EE        +S+A +  
Sbjct: 136 LTRQPFAVGGSGSSYVYGFVDAEYRRDMSKEECQQFVVNTLSLAMNRD 183


>gi|154331019|ref|XP_001561949.1| 20S proteasome beta 6 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059271|emb|CAM36970.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 333

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 66/202 (32%), Gaps = 23/202 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGS 64
              + +  T   +  +  V++AGD ++  G   +    +  K+ +L     +A  G    
Sbjct: 121 SPYQDNGGTTAAIAGNDFVLLAGDTRL-NGNFCLHTRHDESKIFQLTPHTYMASNGMQAD 179

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM----ILIADKTITL- 119
                 LL+   K  +      + S+  +A+      Y R         +++        
Sbjct: 180 RLQLQQLLKYRIKWYQYNNGGKVPSTKSIAQLLSTVLYHRRFFPYYTFNMIVGLDEEGHG 239

Query: 120 -VITGMGDVLEPENGVMAIGSGGSYALSAARALMS---------TQNSAEE---IARKAM 166
              +               GS  S+       L++         ++ S EE   + + A 
Sbjct: 240 VCYSYDAVGSTEPLLYGTRGSAASFVEPLLDCLINRQHMTCQAPSEMSKEEALVMLKNAF 299

Query: 167 SIAADICVYTNHNIVLETLKVG 188
           + AA+  +YT  ++   T+   
Sbjct: 300 TGAAERDIYTGDSVSFITITKD 321


>gi|260809319|ref|XP_002599453.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
 gi|229284732|gb|EEN55465.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
          Length = 205

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 65/194 (33%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ +     V IA D +  +    +  + +K+ ++G    + G  G + D 
Sbjct: 2   SIMSYNGAAIIAMVGKDCVAIAADRRFGVQAQTVSMDFQKIFQMGDRLFL-GLPGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITL 119
            T+  R++ +L  Y  +  R             L  + R   Y        L        
Sbjct: 61  QTVSNRMKFRLNLYELREARQVKPKTFLSMVSNLLYERRFGPYFVEPVVAGLDPKTFEPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
           + +    G  + PE+  +  G+          +L       +++     +A+  AAD   
Sbjct: 121 IASCDLIGCPMIPED-FVVSGTCSEQMYGMCESLWEPNLEPDDLFETISQALLNAADRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +    V+  ++  
Sbjct: 180 VSGWGAVVHVIEKD 193


>gi|17541700|ref|NP_500125.1| Proteasome Beta Subunit family member (pbs-1) [Caenorhabditis
           elegans]
 gi|15145369|gb|AAK84540.1|AC006672_1 Proteasome beta subunit protein 1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 239

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ +  +G VV+  D + S G  +      K+  +    ++   +GS+AD   + + 
Sbjct: 23  GTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVC-RSGSAADTQAIADI 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE------AMILIADKTITL-VITGMGDV 127
            +  ++ Y     +            ++L N         ++   D+ +   V       
Sbjct: 82  AKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDEELGGQVYAIPIGG 141

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
                   A GSG ++      +      + EE   I ++A+ +A      +   + L  
Sbjct: 142 FVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATFRDGSSGGVVRLAV 201

Query: 185 LKV 187
           +  
Sbjct: 202 INK 204


>gi|224473815|gb|ACN49156.1| proteasome beta 9 like subunit [Oryzias dancena]
          Length = 217

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 65/183 (35%), Gaps = 12/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL    DG VVI  D + S+ G+ V      KV ++         AGS ADA  + +
Sbjct: 16  GTTILAAVFDGGVVIGSDSRASMGGEFVSSKTINKVIQVHDRIFCC-MAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGD 126
             + +L  +  Q+    + +A    +          L+A  + A         V      
Sbjct: 75  TAKFQLSFHSVQMENPPLVIAAASILKELCYNNKDELQAGFITAGWDKKKGPQVYVVSLG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +     V   GSG +Y      A      + EE    A  A+++A      +   + L 
Sbjct: 135 GMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVVNLV 194

Query: 184 TLK 186
            + 
Sbjct: 195 VIT 197


>gi|320582637|gb|EFW96854.1| proteasome component Pre3, putative [Pichia angusta DL-1]
          Length = 216

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V+    V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVKFKDGVILGADSRTTTGSYIANRVTDKLTQIHDKIWCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           ++  LE Y     R            +     + M+          +K    V +     
Sbjct: 78  VKYHLEMYKANNGRPPTTKIAASLFQELCYANKEMLTAGIICAGYDEKNGGQVYSIPLGG 137

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
              ++     GSG ++     +       + +E     + ++S A      +   I L  
Sbjct: 138 SLHKHEYAIAGSGSAFIYGYCKKNFKQDMTKDETVSFVKTSLSQAIRWDGSSGGVIRLVV 197

Query: 185 LKVG 188
           L   
Sbjct: 198 LTKD 201


>gi|195454424|ref|XP_002074229.1| GK18404 [Drosophila willistoni]
 gi|194170314|gb|EDW85215.1| GK18404 [Drosophila willistoni]
          Length = 359

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 3   VMGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           ++ D     +   + T+++ +   G V++  D + + G  V      K+ RL      AG
Sbjct: 35  LLQDGFKPPQAYSNGTSVVGLLYKGGVILGTDTRTTKGHVVGFERTNKIFRLHDFIY-AG 93

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLR-SSVELAKDWRMDKYLRNLEAM------ILIA 113
            +G + D   +      +L+       R        +  M +YL     M      I   
Sbjct: 94  GSGVAQDLQQMANVASSQLDLLTMNNNRHRPRVCGANRLMKQYLYRFRTMINAHFIIAGV 153

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
           D +   +     D          +GSG   A+S   +          A ++   A  +AA
Sbjct: 154 DVSGAHLFCTHSDGSSETVPYTVLGSGTMPAISIIESRWEPAMGEFFARDLVCDA--VAA 211

Query: 171 DI--CVYTNHNIVLETLKVG 188
            I   + +   I L  ++  
Sbjct: 212 GIVSDINSGATIKLCIIRTD 231


>gi|225716640|gb|ACO14166.1| Proteasome subunit beta type-6 precursor [Esox lucius]
          Length = 262

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 67/181 (37%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 31  GTTIMAVEYEGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFRC-RSGSAADTQAIADI 89

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +  +L  +  +L  + +  A          +Y   L A I++A         V T     
Sbjct: 90  VAYQLGFHSIELDEAPLVQAAANLFKASCYRYREELMAGIIVAGWDKRRGGQVYTVPVGG 149

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
           +     V   GSG +Y      +      + E+   +   A+S+A +    +   I L  
Sbjct: 150 MLVRQPVSVGGSGSTYIYGFMDSNYKPNMTKEQCLHLVSGALSLAMERDGSSGGVIRLAA 209

Query: 185 L 185
           +
Sbjct: 210 I 210


>gi|291395997|ref|XP_002714703.1| PREDICTED: proteasome beta 9 subunit [Oryctolagus cuniculus]
          Length = 219

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS GQ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGQAVVNRVFDKLSPLHQRIYCA-LSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +LE +  +L    + LA          KY  +L A +++A  D+     + G  + +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGTLEGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE  R    A+++A      +   I L T+
Sbjct: 139 LIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|198453342|ref|XP_002137652.1| GA27343 [Drosophila pseudoobscura pseudoobscura]
 gi|198132319|gb|EDY68210.1| GA27343 [Drosophila pseudoobscura pseudoobscura]
          Length = 251

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 10/188 (5%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
                 +T++ ++    V IA D Q +    V     +K+  L      AG +G  +D  
Sbjct: 44  PPTSTGSTVVGIKYRDGVFIATDRQGTADCIVTTNCMKKIYCLQDNIY-AGGSGIYSDLH 102

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIA--DKTITLVITG 123
            +      +++ +  Q+      +  +      +  Y  N+   ++I   D     + + 
Sbjct: 103 QVARLTRAQMDLHRLQMRCKVPVVCANQFVKHLLYDYQGNIRINLIIGGVDNEGPSLYST 162

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
             D    +    + GSG   A++    L         AE +A  A+       +Y+   I
Sbjct: 163 RFDGTTEKVPFASNGSGDFAAMTVLEKLWRESLDEKGAESLAIDAVRSGIKNDLYSGSPI 222

Query: 181 VLETLKVG 188
            +  ++  
Sbjct: 223 HICVIRTD 230


>gi|225703360|gb|ACO07526.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
          Length = 205

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   V+  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQVVTTDFQKIFPMGDRLHI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A   
Sbjct: 118 EPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVGR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V++ ++  
Sbjct: 178 DAVSGMGVVVQVIEKD 193


>gi|198472075|ref|XP_002133330.1| GA28089 [Drosophila pseudoobscura pseudoobscura]
 gi|198139592|gb|EDY70732.1| GA28089 [Drosophila pseudoobscura pseudoobscura]
          Length = 238

 Score = 93.1 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VV+  D + + G  V      KV R+    +    +GS+AD   L E 
Sbjct: 21  GTTIMAAEFDGGVVLGADSRTTAGGHVANRITDKVTRITDN-VYCCRSGSAADTQELSEV 79

Query: 75  LEKKLEQYPNQLL-------RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   +                ++    K +   KYL     +    D     V       
Sbjct: 80  VSNLMWHREMHTGEKTLVRDVAAEFRDKCYNGRKYLYAGIIVGGWDDLHGAQVYNISLGG 139

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
           +     +   GSG  Y     R         EE+    R A+  A     ++     +  
Sbjct: 140 MMMREQLSYGGSGSIYISGMLRDGYRPNMEKEELVLLFRSALKQAIHHDSFSGGVSRIAI 199

Query: 185 LKVG 188
           +   
Sbjct: 200 ITKE 203


>gi|221123833|ref|XP_002155191.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
           type, 6 [Hydra magnipapillata]
          Length = 234

 Score = 93.1 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D + + G  V      K+  +         +GS+AD   + ++
Sbjct: 34  GTTIMAVEFDGGVVVGADSRTTSGSYVANRVTDKLTPVTDNIFCC-RSGSAADTQAIADQ 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTI---TLVITGMGDV 127
           +  +L+ +  +  R ++                    A I++A         V +     
Sbjct: 93  VRYELDMHMAESGRQALVKTAANLFRNVCYERRDSASAGIIVAGWDEREGGQVYSVPIGG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG +Y      +      S +E  +    A+++A      +   I L  
Sbjct: 153 MCLRQPFSIGGSGSTYIYGHCDSTFVKGMSKDECIKFVTNAVALAIFRDGSSGGCIRLAI 212

Query: 185 LKVG 188
           +   
Sbjct: 213 INKD 216


>gi|56758256|gb|AAW27268.1| SJCHGC09410 protein [Schistosoma japonicum]
 gi|226489270|emb|CAX75779.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
 gi|226489272|emb|CAX75780.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
 gi|226489274|emb|CAX75781.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
          Length = 212

 Score = 93.1 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 20/201 (9%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSS 65
                  +  T++ +  +   +IA D ++  G  V+   N  ++ +LG+GN++ G AG  
Sbjct: 1   MFNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVL-GCAGFH 59

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM--DKYLRNLEAMILIA-----DKTIT 118
            D  TL + LE K++ Y     +     A    +    Y R      +       D    
Sbjct: 60  GDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGDRG 119

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAAR-------ALMS----TQNSAEEIARKAMS 167
           ++ +          G  A GS  +              +        + +A ++      
Sbjct: 120 VLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNKTSKYHVSRLNKETAVKLTHDIFI 179

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+        +V+ T+   
Sbjct: 180 SAAERDTQCGDGVVIYTVTKD 200


>gi|313230140|emb|CBY07844.1| unnamed protein product [Oikopleura dioica]
          Length = 240

 Score = 93.1 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 60/185 (32%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  ++     K+ ++ +       +GS+AD   +   
Sbjct: 39  GTTIMAVEFDGGVVIGADSRTSAGAYIVNRVTDKLTKVHERIYCC-RSGSAADTQFIATA 97

Query: 75  LEKKLEQY-PNQLLRSSVELAKDWRMDKYLRNLEAMI-------LIADKTITLVITGMGD 126
           ++ +LE +       +           +Y                        V +    
Sbjct: 98  VKTRLEGHAIMIDEENPSVETAATLFKEYCYEYRDQFSAGILVAGWDPVEGGQVFSIPLG 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
            ++    V   GSG ++             S EE     +  ++ A D    +   I L 
Sbjct: 158 GMKIRQKVAIGGSGSTWIYGLVDNQFKEGMSKEETKAFVKMCVAHAMDRDASSGGVIRLA 217

Query: 184 TLKVG 188
           T+   
Sbjct: 218 TITKD 222


>gi|198472043|ref|XP_002133324.1| GA28033 [Drosophila pseudoobscura pseudoobscura]
 gi|198139580|gb|EDY70726.1| GA28033 [Drosophila pseudoobscura pseudoobscura]
          Length = 238

 Score = 93.1 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VV+  D + + G  V      KV R+    +    +GS+AD   L E 
Sbjct: 21  GTTIMAAEFDGGVVLGADSRTTAGGHVANRITDKVTRITDN-VYCCRSGSAADTQELSEV 79

Query: 75  LEKKLEQYPNQLL-------RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   +                ++    K +   KYL     +    D     V       
Sbjct: 80  VSNLMWHREMHTGEKTLVRDVAAEFRDKCYNGRKYLYAGIIVGGWDDLHGAQVYNISLGG 139

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
           +     +   GSG  Y     R         EE+    R A+  A     ++     +  
Sbjct: 140 MMMREQLSYGGSGSIYISGMLRDGYRPNMEKEELVLLFRSALKQAIHHDSFSGGVSRIAI 199

Query: 185 LKVG 188
           +   
Sbjct: 200 ITKE 203


>gi|291225400|ref|XP_002732675.1| PREDICTED: proteasome beta 3 subunit-like [Saccoglossus
           kowalevskii]
          Length = 205

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 64/194 (32%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  + + ++ ++    V IA D +  +    +  + +K+  +G    + G  G + D 
Sbjct: 2   SIMSYNGSAVVAMKGKDCVAIAADRRFGIQAQTVSMDFQKIFEMGPRLYL-GLPGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------DKTITL 119
            T+  RL+ +L  Y  +  R          +   L                   D     
Sbjct: 61  QTVSNRLKFRLNLYTLRENRKIKPKTFMSMVSNLLYERRFGPYFVEPIIAGLEPDTYEPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICV 174
           + +    G  + PE+  +  G+          +L     ++EE+     +A+  A D   
Sbjct: 121 ICSLDLIGCPMVPED-FVVAGTSSEQLYGMCESLWLPDMNSEELFETVSQALLNAVDRDA 179

Query: 175 YTNHNIVLETLKVG 188
                 V+  ++  
Sbjct: 180 LAGWGAVVHIIEKD 193


>gi|195151901|ref|XP_002016877.1| GL22004 [Drosophila persimilis]
 gi|194111934|gb|EDW33977.1| GL22004 [Drosophila persimilis]
          Length = 298

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V+IA D Q +    V     +K+  L      AG +G   D   +   
Sbjct: 43  GSTAVGIKYRDGVIIATDRQGTADCIVTTNCMKKIYCLQDNIY-AGGSGIYGDLHHVARL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
              +++ +  Q+      +  +      +  Y  N+   ++I   D     + +   D  
Sbjct: 102 TRAQMDLHRLQMSCKVPVVCANQFVKHLLYDYQGNIRINLIIGGVDNEGPSLYSTHFDGT 161

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +    + GSG   A++              AE +A  A+       +Y+   I +  +
Sbjct: 162 TEKVPFASNGSGDFAAMTVLEKRWRESLDEKGAESLAIDAVRSGIKNDLYSCSPIHICVI 221

Query: 186 KVG 188
           +  
Sbjct: 222 RTD 224


>gi|209735460|gb|ACI68599.1| Proteasome subunit beta type-7 precursor [Salmo salar]
          Length = 242

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 7/144 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 44  GTTIAGIVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCG-AGVAADAEVTTQM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
           +   +E +     R  + +    ++ + L   +  I         D T   + +      
Sbjct: 103 MSSNVELHSLSTGRPPLVVMVTRQLKQMLFRYQGHIGSSLIVGGVDVTGAHLYSVYPHGS 162

Query: 129 EPENGVMAIGSGGSYALSAARALM 152
             +   + +GSG   A+S      
Sbjct: 163 YDKLPFLTMGSGAGAAISIFEDRY 186


>gi|209881526|ref|XP_002142201.1| proteasome subunit beta type 1 [Cryptosporidium muris RN66]
 gi|209557807|gb|EEA07852.1| proteasome subunit beta type 1, putative [Cryptosporidium muris
           RN66]
          Length = 245

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 64/200 (32%), Gaps = 20/200 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  + + +      VI  D ++S G  +   +  +V  +    +++  +G  A
Sbjct: 34  EFNPYTDNGGSCIALAGSDFAVIVSDTRLSQGYRIASRSVTRVFEITAKCVLSC-SGMFA 92

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D   L + +  +++ Y  +  +S    A    +   L +           I  +      
Sbjct: 93  DITALQKLIRARVKIYEFEHKKSPSIGAVAQLLSTVLYSKRFFPYYCYCAIAGLDEYGNG 152

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAAR-----------ALMSTQNSAEEIARKAMS 167
                            A G+G     S               +++ +    ++ + A++
Sbjct: 153 VAYGYDAVGSFQSGKYFANGTGSHLISSILDNQISGNNQLYPKILTNKVDMIDLLKDAIT 212

Query: 168 IAADICVYTNHNIVLETLKV 187
            A++  VYT  +  +  +  
Sbjct: 213 SASERDVYTGDSAQVVVIDA 232


>gi|147742762|gb|ABQ50544.1| hypothetical protein [Brassica rapa]
          Length = 218

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 42/163 (25%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 45  KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 103

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
            L  K                                         +     +    +  
Sbjct: 104 NLGIK--------------------------------------GPGLYYVDNEGGRLKGD 125

Query: 134 VMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
             ++GSG  YA     +      S   A E+AR+++  A    
Sbjct: 126 RFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRD 168


>gi|308463733|ref|XP_003094138.1| CRE-PBS-1 protein [Caenorhabditis remanei]
 gi|308248129|gb|EFO92081.1| CRE-PBS-1 protein [Caenorhabditis remanei]
          Length = 239

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 64/183 (34%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ +  +G VV+  D + S G  +      K+  + +  ++   +GS+AD   + + 
Sbjct: 23  GTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITENMVVC-RSGSAADTQAIADI 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE------AMILIADKTITL-VITGMGDV 127
            +  ++ Y     +            ++L N         ++   D  +   V       
Sbjct: 82  AKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDSELGGQVYAIPIGG 141

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
                   A GSG ++      +      + +E   I ++A+ +A      +   + L  
Sbjct: 142 FVSRQRSTASGSGSTFVQGFLDSQWRPDLTLDECKAIVKQAVGLATFRDGSSGGVVRLAV 201

Query: 185 LKV 187
           +  
Sbjct: 202 IDK 204


>gi|195156629|ref|XP_002019199.1| GL26231 [Drosophila persimilis]
 gi|194115352|gb|EDW37395.1| GL26231 [Drosophila persimilis]
          Length = 238

 Score = 93.1 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VV+  D + + G  V      KV R+    +    +GS+AD   L E 
Sbjct: 21  GTTIMAAEFDGGVVLGADSRTTAGGHVANRITDKVTRITDN-VYCCRSGSAADTQELSEV 79

Query: 75  LEKKLEQYPNQLL-------RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           +   +                ++    K +   KYL     +    D     V       
Sbjct: 80  VSNLMWHREMHTGEKTLVRDVAAEFRDKCYNGRKYLYAGIIVGGWDDLHGAQVYNIALGG 139

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
           +     +   GSG  Y     R         EE+    R A+  A     ++     +  
Sbjct: 140 MMMREQLSYGGSGSIYISGMLRDGYRPNMEKEELVLLFRSALKQAIHHDSFSGGVSRIAI 199

Query: 185 LKVG 188
           +   
Sbjct: 200 ITKE 203


>gi|226471340|emb|CAX70751.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
          Length = 212

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 69/201 (34%), Gaps = 20/201 (9%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSS 65
                  +  T++ +  +   +IA D ++  G  V+   N  ++ +LG+GN++ G+AG  
Sbjct: 1   MFNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVL-GYAGFH 59

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM--DKYLRNLEAMILIA-----DKTIT 118
            D  TL + LE K++ Y     +     A    +    Y R      +       D    
Sbjct: 60  GDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGDRG 119

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAAR-------ALMS----TQNSAEEIARKAMS 167
           ++ +          G  A GS  +              +        + +A ++      
Sbjct: 120 VLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNKTSKYHVSRLNKETAVKLTHDIFI 179

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+        +V+ T+   
Sbjct: 180 SAAERDTQCGDGVVIYTVTKD 200


>gi|225705338|gb|ACO08515.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
          Length = 205

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A D 
Sbjct: 118 EPFIRSLGLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V++ ++  
Sbjct: 178 DAVSGMGVVVQVIEKD 193


>gi|225704686|gb|ACO08189.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
          Length = 217

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 10/167 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADI 172
                    GSG SY      A      S E+        +S+A   
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSR 183


>gi|213407092|ref|XP_002174317.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
 gi|212002364|gb|EEB08024.1| proteasome component PRE3 [Schizosaccharomyces japonicus yFS275]
          Length = 229

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 58/183 (31%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +R    V++A D + ++G  +      K+ +L +       +GS+AD   + + 
Sbjct: 24  GTTITALRFQEGVILAADSRTTMGAYIANRVTDKLTQLSEKIWCC-RSGSAADTQAVADI 82

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE--- 131
           L+  L QY  Q               +     +  +              G+V       
Sbjct: 83  LKYYLSQYRMQYGVEPTVQTAASLASEMCYQNKDYLTAGLIIAGYDEETGGEVYSIPLGG 142

Query: 132 ----NGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
                 +   GSG ++      A        E      + A+ +A +    +   I +  
Sbjct: 143 SVHRQPLAIGGSGSAFIYGFCDANFKENMDKETAIQFLKNAVGLAMERDRSSGGTIRMVI 202

Query: 185 LKV 187
           L  
Sbjct: 203 LTK 205


>gi|185133100|ref|NP_001117722.1| proteasome subunit beta type-3 [Oncorhynchus mykiss]
 gi|6093786|sp|O73817|PSB3_ONCMY RecName: Full=Proteasome subunit beta type-3; AltName:
           Full=Proteasome chain 13; AltName: Full=Proteasome
           component C10-II; AltName: Full=Proteasome theta chain
 gi|3063687|gb|AAC14141.1| proteasome subunit C10-11 [Oncorhynchus mykiss]
 gi|225705904|gb|ACO08798.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
          Length = 205

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A D 
Sbjct: 118 EPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V++ ++  
Sbjct: 178 DAVSGMGVVVQVIEKD 193


>gi|225705836|gb|ACO08764.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
          Length = 205

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGQQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A D 
Sbjct: 118 EPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V++ ++  
Sbjct: 178 DAISGMGVVVQVIEKD 193


>gi|197632283|gb|ACH70865.1| proteasome (prosome, macropain) subunit, beta type 3 [Salmo salar]
 gi|209735862|gb|ACI68800.1| Proteasome subunit beta type-3 [Salmo salar]
          Length = 205

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 63/196 (32%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A D 
Sbjct: 118 EPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   ++++ ++  
Sbjct: 178 DAVSGMGVIVQVIEKD 193


>gi|225703224|gb|ACO07458.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
          Length = 243

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 48/155 (30%), Gaps = 8/155 (5%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  V     VV+  D + + G+ V      K+  +       G AG++AD 
Sbjct: 38  KPMKT-GTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCG-AGTAADT 95

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVIT 122
               + L   L  +     R+   +     +   L           ++   D T   + T
Sbjct: 96  EKTTDLLSSNLTIFSMNSGRNPRVVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYT 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
                       +A+GSG   AL            
Sbjct: 156 VGPYGSIDNVPYLAMGSGDLAALGILEDRFKPNME 190


>gi|258614009|ref|NP_036840.2| proteasome subunit beta type-9 [Rattus norvegicus]
 gi|46237560|emb|CAE83940.1| proteasome (prosome, macropain) subunit, beta type, 9 [Rattus
           norvegicus]
 gi|60688585|gb|AAH91161.1| Proteasome (prosome, macropain) subunit, beta type 9 (large
           multifunctional peptidase 2) [Rattus norvegicus]
 gi|149043360|gb|EDL96811.1| proteosome (prosome, macropain) subunit, beta type 9 [Rattus
           norvegicus]
          Length = 219

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCA-LSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +               M+   D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQREGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      + EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KVG 188
              
Sbjct: 199 TAD 201


>gi|195173300|ref|XP_002027430.1| GL20944 [Drosophila persimilis]
 gi|194113282|gb|EDW35325.1| GL20944 [Drosophila persimilis]
          Length = 224

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 25/204 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + +  T+L +     VVI GD ++S G  ++     K+  L K  ++A   G   DA
Sbjct: 8   DLYENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAA-TGCWCDA 66

Query: 69  FTLLERLEKKLEQY--PNQLLRSSVELAKDWRMDKYLRNLEAMIL--------IADKTIT 118
            +L   L+ K + Y   +  + S   +A+   + +Y R      +           +   
Sbjct: 67  VSLTNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAV 126

Query: 119 LVITGMGDVLEPENGVMAIGSG-------GSYALSAARALMSTQNS-------AEEIARK 164
                +G  +   + V     G            +    L  T          A  IA+ 
Sbjct: 127 FSYDCIGHFVRESSRVEGTAVGILQPVLDNQIGYTKKDLLDETSEQPALTKERALAIAKD 186

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
           A   AA   V+T  ++++  +   
Sbjct: 187 AFITAAQSDVFTGDSVIINVITKD 210


>gi|464445|sp|P28077|PSB9_RAT RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
           molecular mass protein 2; AltName: Full=Macropain chain
           7; AltName: Full=Multicatalytic endopeptidase complex
           chain 7; AltName: Full=Proteasome chain 7; AltName:
           Full=Proteasome subunit beta-1i; AltName: Full=Really
           interesting new gene 12 protein; Flags: Precursor
 gi|286252|dbj|BAA01589.1| proteasome subunit R-RING12 [Rattus sp.]
          Length = 219

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCA-LSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +               M+   D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      + EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KVG 188
              
Sbjct: 199 TAD 201


>gi|225705198|gb|ACO08445.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
          Length = 217

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIELDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  DK     +    + L
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVYVTLNGL 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      S E+        +S+A      +     L T+
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196

Query: 186 KVG 188
              
Sbjct: 197 DEK 199


>gi|116200766|ref|XP_001226195.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88175642|gb|EAQ83110.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 212

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 12  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 70

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           ++ +LE +     +                     L A ++IA         V +     
Sbjct: 71  VKYQLELFAMTNGKPPTTQTAAAIFQELCYANKDRLSAGLIIAGWDERHGGQVYSIPLGG 130

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A          A    + A+  A      +   I +  
Sbjct: 131 SLHKQPYSIGGSGSTYIYGFCDANWREGMEEADAVSFVKDALKEAIKWDGSSGGVIRMVV 190

Query: 185 LKVG 188
           L   
Sbjct: 191 LTAK 194


>gi|50419453|ref|XP_458253.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
 gi|49653919|emb|CAG86329.1| DEHA2C13222p [Debaryomyces hansenii]
          Length = 206

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 58/207 (28%), Gaps = 24/207 (11%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++  + + +     + IA D ++      +  N  K+ +LG    + G  G + 
Sbjct: 1   MSDPSSINGGSAVAMVGKDCIAIACDLRLGNQSLGLSNNFEKIFQLGDKTFL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  +  R                  R   Y        L +    
Sbjct: 60  DVITLSETFRFKNNLYKLREEREIEPTTLANLVSSTLYEKRFGPYFVGPIVAGLDSKTNK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       E++     +++  A D  
Sbjct: 120 PFICGFDLIGCIDFAKDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQSLLNAVDRD 179

Query: 174 --------VY--TNHNIVLETLKVGDE 190
                   VY  T  N+    LK   +
Sbjct: 180 ALSGWGAVVYIVTKDNVTKRVLKTRQD 206


>gi|5823090|gb|AAD53036.1|AF115539_1 proteasome delta [Oncorhynchus mykiss]
          Length = 223

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 23  GTTIMAVEYDGGVVIGADSRTTTGAYIANRVTDKLTPIHDRIFCC-RSGSAADTQAIADV 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +  +L  +  +L  + +             +Y   L A I++A         V T     
Sbjct: 82  VTYQLGFHSIELDEAPLVQTAANLFKASCYRYREELMAGIIVAGWDKRRGGQVYTVPVGG 141

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
           +     V   GSG +Y      +      + ++   +   A+S+A +    +   + L  
Sbjct: 142 MLVRQPVSVGGSGSTYIYGYMDSNYKPNMTKDQCLRLVSGALSLAMERDGSSGGVVRLAA 201

Query: 185 L 185
           +
Sbjct: 202 I 202


>gi|18124172|gb|AAL59853.1|AF357921_1 proteasome beta-subunit [Heterodontus francisci]
          Length = 217

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 10/168 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D +VS G+ V      K+  L +    A  +GS+ADA  + + 
Sbjct: 18  GTTIIAVEFDGGVVIGSDSRVSAGEAVCNRVMNKLSVLHERIYCA-LSGSAADAQAIADS 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +LE +  ++  + +  A          KY   L A +++A  D+     +      +
Sbjct: 77  VNYQLELHSIEVDDAPLVRAAASMVKNISYKYKEELSAHLIVAGWDRKKRGQVYATLGGM 136

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
                    GSG  Y      A      S +E       A+++A    
Sbjct: 137 LVRQPFAVGGSGSVYIYGYVDAAYKAGMSKDECLRFVTNAITLAIGRD 184


>gi|66810508|ref|XP_638961.1| proteasome subunit beta type 7 [Dictyostelium discoideum AX4]
 gi|74897083|sp|Q54QR2|PSB7_DICDI RecName: Full=Proteasome subunit beta type-7; Flags: Precursor
 gi|60467585|gb|EAL65606.1| proteasome subunit beta type 7 [Dictyostelium discoideum AX4]
          Length = 266

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 10/181 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V   G VV+  D + + G  V   N  K+  +       G AG++AD  +    
Sbjct: 34  GTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCG-AGTAADTESATAL 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +  KL+ +     + +  +     + + L   +  I  A      D     + T      
Sbjct: 93  ISSKLKLHKLSTGKQTRVITALTMLKQMLFKYQGHISAALILGGIDINGPSLHTIYPHGS 152

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKAMSIAADI--CVYTNHNIVLETL 185
             +   + +GSG   A++   A      + EE IA  A +I++ I   + +  N+ +  +
Sbjct: 153 TDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAISSGIFNDLGSGSNVDVTVI 212

Query: 186 K 186
           +
Sbjct: 213 E 213


>gi|145499554|ref|XP_001435762.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402897|emb|CAK68365.1| unnamed protein product [Paramecium tetraurelia]
          Length = 214

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 69/201 (34%), Gaps = 17/201 (8%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           ++  K    +   TTI+ V  DG ++I  D + S GQ V    A K+  +    I    +
Sbjct: 6   ILASKFEP-ETTGTTIMAVIYDGGLLIGADSRTSSGQFVADRCADKIDYIHD-RIFCLRS 63

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTI- 117
           G++AD   + + +   ++ +  +L R             +L   +    A I++A     
Sbjct: 64  GAAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYKDSMSASIIVAGWDPY 123

Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               + T        E      GSG ++      +      +   A      A++ A   
Sbjct: 124 KGPQIFTLPLGGSVIEQKWSIGGSGSTFIWGFCDSNYKENMTHQEARAFVSHAVAHAMFR 183

Query: 173 CVYTNH-----NIVLETLKVG 188
              +       N+  + ++  
Sbjct: 184 DGSSGGIIRLLNVTKDKIERE 204


>gi|195159798|ref|XP_002020765.1| GL14524 [Drosophila persimilis]
 gi|194117715|gb|EDW39758.1| GL14524 [Drosophila persimilis]
          Length = 270

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G +V+  D + S G  V      K+  +    I+   AG SAD      
Sbjct: 62  HGTTALGFVYQGGIVLCADSRSSSGINVTTQTMDKIVPV-SSQIVGTLAGGSADCTYWYR 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------TITLVITGMGD 126
            L ++   +  +  R     A    +           L               ++    D
Sbjct: 121 VLARESRLHELRYKRPMSVDAAAKMICHVSEMHRGTGLNMGMLLAGYSPKGPSLVYVDSD 180

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
            +       ++GSG S AL     +     + EE   +A +++  A      T   +VL
Sbjct: 181 GVNISGKRFSVGSGASNALGILDPMYRFDLTDEEAFDLALQSLCQATLCDASTGGMVVL 239


>gi|17945936|gb|AAL49013.1| RE44901p [Drosophila melanogaster]
          Length = 224

 Score = 92.7 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ R+    +    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITD-KVYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  + NQ  + ++          Y  +    +L               V +     
Sbjct: 74  VAYSLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQRGGQVYSIPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R       + E+     +KA+  A      +   + +  
Sbjct: 134 MLTRESCTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKD 197


>gi|3116216|dbj|BAA25923.1| proteasome subunit [Dictyostelium discoideum]
          Length = 213

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  DG V++  D + + G  +      K+  + +       +GS+AD   + + 
Sbjct: 14  GTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCC-RSGSAADTQAISDY 72

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE + ++L                  + +  ++        DK    V        
Sbjct: 73  VRYYLEMHTSELCDEPDVKTAACLFQLLCYSNKNNLMAGIIVAGWDKHQGSVYNISLGGS 132

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +      GSG +Y      +    + +     E  + ++++A      +   I L  +
Sbjct: 133 MVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDRCIEFVQNSLALAMFRDGSSGGVIRLCII 192

Query: 186 KVG 188
              
Sbjct: 193 DKN 195


>gi|322496529|emb|CBZ31598.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 247

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 65/201 (32%), Gaps = 21/201 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKA-NARKVRRLGKGNIIA--GFAGSS 65
              + +  T   +     V++AGD +++    +    +  K+ +L     +A  G     
Sbjct: 35  SPYQDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADR 94

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-----MILIADKTITLV 120
                +L+   K  +      +  +  +A+      Y R         M++  D+    V
Sbjct: 95  LQLQQMLKYRVKWYQYNNGGRVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHGV 154

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---------TQNSAEE---IARKAMS 167
             +               GS  S+       L++          + + EE   + + A +
Sbjct: 155 CYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLAMLKNAFT 214

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  +YT  ++    +   
Sbjct: 215 GAAERDIYTGDSVSFFIITKD 235


>gi|330040457|ref|XP_003239922.1| 26S proteasome SU [Cryptomonas paramecium]
 gi|327206848|gb|AEA39024.1| 26S proteasome SU [Cryptomonas paramecium]
          Length = 254

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 10/183 (5%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           ++  K   TTI+ +     +++A D + + G+ +      K+  + K     G AG+SAD
Sbjct: 35  NFNFKKTGTTIIGLLFKDGIILAADTRATNGKVICDVACDKIHFISKNISCCG-AGTSAD 93

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
              L + + ++ E   N   +     +  + +   L   +  I  A      D     + 
Sbjct: 94  NEYLTKTIFEQTELQENFTEKEPQLQSVAFFLKNILYRFQGFISAALILAGFDSVGGKLY 153

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNH 178
                 L   +  + +GSG   + S      S          +A++++       + +  
Sbjct: 154 GIYPHGLVENSYFITMGSGSLASASILEKFYSDYMDLRIGLNLAKESILAGIYNDLGSGG 213

Query: 179 NIV 181
           N+ 
Sbjct: 214 NVD 216


>gi|67470012|ref|XP_650977.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56467649|gb|EAL45591.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 213

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 71/182 (39%), Gaps = 10/182 (5%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M    + +  + +  TTI+ V  +G V++  DG+ S+G  V+     K+R +     +  
Sbjct: 1   MEFTHNAYQPISL-GTTIIGVVYNGGVLLGADGRTSMGSIVVNRCKNKIRMVSDSIGMCT 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            AG++A + T+ + ++  L  Y  Q       LA    +   +   ++ +  +       
Sbjct: 60  -AGTAAHSETIGDYVKHALRMYTAQTGEEPTVLAAATSIKNIIYGNKSFLSSSVVCGGYD 118

Query: 121 ITGMGDVLEP-------ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                 +          ++ +   GSG +Y      A      + EE A++ +  A  + 
Sbjct: 119 PVNGATLYRILQSGAMKQDDICVGGSGSTYIWGYCDAHFKKNMTFEE-AKQFIVTAVSLA 177

Query: 174 VY 175
           +Y
Sbjct: 178 IY 179


>gi|320164621|gb|EFW41520.1| proteasome subunit beta type-6 [Capsaspora owczarzaki ATCC 30864]
          Length = 223

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  T+I+ V  +G VVI  D + + G  +      K+ R+         +GS+AD   + 
Sbjct: 21  MTGTSIMAVEFNGGVVIGADSRTTTGSYIANRVTDKLTRITDRIYCC-RSGSAADTQAIA 79

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMG 125
           + ++  L+ +  +L       +      +        ++               V T   
Sbjct: 80  DYVKYYLDLHSIELGERPSVHSAASVFQQLCYGNRENLMAGIIVAGWDRKLGGQVYTIPL 139

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
             +         GSG +Y      A      +    E+  + A+++A      +   + +
Sbjct: 140 GGMCLRQPFSIGGSGSTYIFGHVDATFKLGMTQAECEDFVKGALALAMARDGSSGGVVRI 199

Query: 183 ETLK 186
            T+ 
Sbjct: 200 ATIT 203


>gi|16768432|gb|AAL28435.1| GM04535p [Drosophila melanogaster]
          Length = 224

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ R+    +    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITD-KVYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  + NQ  + ++          Y  +    +L               V +     
Sbjct: 74  VAYSLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQRGGQVYSIPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R       + E+     +KA+  A      +   + +  
Sbjct: 134 MLTRESCTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKD 197


>gi|198475469|ref|XP_002132926.1| GA25177 [Drosophila pseudoobscura pseudoobscura]
 gi|198138837|gb|EDY70328.1| GA25177 [Drosophila pseudoobscura pseudoobscura]
          Length = 270

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 58/179 (32%), Gaps = 11/179 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G +V+  D + S G  V      K+  +    I+   AG SAD      
Sbjct: 62  HGTTALGFVYQGGIVLCADSRSSSGINVTTQTMDKIVPV-SSQIVGTLAGGSADCTYWYR 120

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK-------TITLVITGMGD 126
            L ++   +  +  R     A    +           L               ++    D
Sbjct: 121 VLARENRLHELRYKRPMSVDAAAKMICHVSEMHRGTGLNMGMLLAGYSPKGPSLVYVDSD 180

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
            +       ++GSG S AL     +     + EE   +A +++  A      T   +VL
Sbjct: 181 GVNISGKRFSVGSGASNALGILDPMYRFDLTDEEAFDLALQSLCQATLCDASTGGMVVL 239


>gi|146070767|ref|XP_001463096.1| 20S proteasome beta 6 subunit; proteasome beta 6 subunit
           [Leishmania infantum]
 gi|134067179|emb|CAM65445.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
          Length = 247

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 65/201 (32%), Gaps = 21/201 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKA-NARKVRRLGKGNIIA--GFAGSS 65
              + +  T   +     V++AGD +++    +    +  K+ +L     +A  G     
Sbjct: 35  SPYQDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADR 94

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-----MILIADKTITLV 120
                +L+   K  +      +  +  +A+      Y R         M++  D+    V
Sbjct: 95  LQLQQMLKYRVKWYQYNNGGRVPPTKAIAQLMSTLLYHRRFFPYYTFNMVVGLDEEGHGV 154

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---------TQNSAEE---IARKAMS 167
             +               GS  S+       L++          + + EE   + + A +
Sbjct: 155 CYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLAMLKNAFT 214

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  +YT  ++    +   
Sbjct: 215 GAAERDIYTGDSVSFFIITKD 235


>gi|24653999|ref|NP_652031.2| proteasome beta1 subunit [Drosophila melanogaster]
 gi|7303007|gb|AAF58077.1| proteasome beta1 subunit [Drosophila melanogaster]
 gi|116806936|emb|CAL26894.1| CG8392 [Drosophila melanogaster]
 gi|116806938|emb|CAL26895.1| CG8392 [Drosophila melanogaster]
 gi|116806940|emb|CAL26896.1| CG8392 [Drosophila melanogaster]
 gi|116806942|emb|CAL26897.1| CG8392 [Drosophila melanogaster]
 gi|116806944|emb|CAL26898.1| CG8392 [Drosophila melanogaster]
 gi|116806946|emb|CAL26899.1| CG8392 [Drosophila melanogaster]
 gi|116806948|emb|CAL26900.1| CG8392 [Drosophila melanogaster]
 gi|116806950|emb|CAL26901.1| CG8392 [Drosophila melanogaster]
 gi|116806952|emb|CAL26902.1| CG8392 [Drosophila melanogaster]
 gi|116806954|emb|CAL26903.1| CG8392 [Drosophila melanogaster]
 gi|116806956|emb|CAL26904.1| CG8392 [Drosophila melanogaster]
 gi|201065949|gb|ACH92384.1| FI07228p [Drosophila melanogaster]
 gi|223967797|emb|CAR93629.1| CG8392-PA [Drosophila melanogaster]
 gi|223967799|emb|CAR93630.1| CG8392-PA [Drosophila melanogaster]
 gi|223967801|emb|CAR93631.1| CG8392-PA [Drosophila melanogaster]
 gi|223967803|emb|CAR93632.1| CG8392-PA [Drosophila melanogaster]
 gi|223967805|emb|CAR93633.1| CG8392-PA [Drosophila melanogaster]
 gi|223967807|emb|CAR93634.1| CG8392-PA [Drosophila melanogaster]
 gi|223967809|emb|CAR93635.1| CG8392-PA [Drosophila melanogaster]
 gi|223967811|emb|CAR93636.1| CG8392-PA [Drosophila melanogaster]
 gi|223967813|emb|CAR93637.1| CG8392-PA [Drosophila melanogaster]
 gi|223967815|emb|CAR93638.1| CG8392-PA [Drosophila melanogaster]
 gi|223967817|emb|CAR93639.1| CG8392-PA [Drosophila melanogaster]
 gi|223967819|emb|CAR93640.1| CG8392-PA [Drosophila melanogaster]
          Length = 224

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ R+    +    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITD-KVYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  + NQ  + ++          Y  +    +L               V +     
Sbjct: 74  VAYSLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQRGGQVYSIPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R       + E+     +KA+  A      +   + +  
Sbjct: 134 MLTRESCTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKD 197


>gi|41352687|gb|AAS01050.1| putative proteasome 20S beta5 subunit [Brassica napus]
          Length = 150

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 11/149 (7%)

Query: 35  VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELA 94
            S+G  +   + +K+  +    ++   AG +AD       L  K   +     R      
Sbjct: 1   ASMGGYISSQSVKKIIEINPY-MLGTMAGGAADRQFWHRNLGIKCRLHELANKRRISVSG 59

Query: 95  KDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSA 147
               +   L +   M L         D+T   +     +    +    ++GSG  YA   
Sbjct: 60  ASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGV 119

Query: 148 ARALMSTQNS---AEEIARKAMSIAADIC 173
             +      S   A E+AR+++  A    
Sbjct: 120 LDSGYKFDMSVEEASELARRSIYHATFRD 148


>gi|171680727|ref|XP_001905308.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939991|emb|CAP65217.1| unnamed protein product [Podospora anserina S mat+]
          Length = 230

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 29  GTSIMAITFKDGVILGADSRTTTGAYIANRVTDKLTRVHDTIWCC-RSGSAADTQAVADI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLR----NLEAMILIADKTITL---VITGMGDV 127
           ++ +L  +     +            +        L A ++IA         V +     
Sbjct: 88  VQYQLGLFHMMNGKPPTTQTAAAIFQEMCYANKDRLSAGLIIAGWDERHGGQVYSIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A          A    ++++  A      +   I +  
Sbjct: 148 SLHKQPYAIGGSGSTYIYGYCDANWKEGMEEADAVNFVKESLKEAIKWDGSSGGVIRMVV 207

Query: 185 LKVG 188
           L   
Sbjct: 208 LTAK 211


>gi|209737458|gb|ACI69598.1| Proteasome subunit beta type-3 [Salmo salar]
 gi|303661230|gb|ADM16027.1| Proteasome subunit beta type-3 [Salmo salar]
          Length = 205

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A D 
Sbjct: 118 EPFICSLDLIGCPMVTEDFVVSGTCSEQMHGMCESLWEPDMEPEDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V++ ++  
Sbjct: 178 DAVSGMGVVVQVIEKD 193


>gi|195334769|ref|XP_002034049.1| GM20098 [Drosophila sechellia]
 gi|194126019|gb|EDW48062.1| GM20098 [Drosophila sechellia]
          Length = 224

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ R+    +    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITD-KVYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  + NQ  + ++          Y  +    +L               V +     
Sbjct: 74  VAYSLNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQRGGQVYSIPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R       + E+     +KA+  A      +   + +  
Sbjct: 134 MLTREACTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKD 197


>gi|225719280|gb|ACO15486.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
          Length = 239

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 63/203 (31%), Gaps = 22/203 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T + +      VIA D +++ G   ++  N  KV +L + +++ G  G  
Sbjct: 26  SFQPYQDNGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVL-GSCGCW 84

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSS--VELAKDWRMDKYLRNLEAMILIA------DKTI 117
            D  T +  +E K++ Y     +      LA+      Y R      +        +   
Sbjct: 85  CDVLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLDENGQ 144

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM---------STQNSAEE---IARKA 165
             + T        +  +   G+           ++             + +E   +    
Sbjct: 145 GCIYTYDPVGCIEKVTMSCSGASMELIQPILDNIIDKKNMTNATKKDLTIDESVNLIHDC 204

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
              A +  + T   I+ + +   
Sbjct: 205 FVSATERQISTGDGIIFKIITKD 227


>gi|225716290|gb|ACO13991.1| Proteasome subunit beta type-9 precursor [Esox lucius]
          Length = 216

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 17  GTTIIAVEFNGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 75

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  D+     +    + L
Sbjct: 76  VNYQLDVHSIEIGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRGGGQVFVTLNGL 135

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      S E+        +S+A      +     L T+
Sbjct: 136 LSRQPFAVGGSGSSYVYGFVDAEYQKGMSKEDCQQFVVNTISLAMSRDGSSGGVAYLVTI 195

Query: 186 KVG 188
              
Sbjct: 196 DEK 198


>gi|70934295|ref|XP_738395.1| proteasome subunit beta type 7 precursor [Plasmodium chabaudi
           chabaudi]
 gi|56514579|emb|CAH86228.1| proteasome subunit beta type 7 precursor, putative [Plasmodium
           chabaudi chabaudi]
          Length = 221

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 14/176 (7%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
              V++  D + + G  V   N  K+  + K    AG AG + D       L+  +E + 
Sbjct: 1   QNAVILGADTRATEGPIVADKNCSKLHYISKNIYCAG-AGVAGDLEHTTLWLQHNVELHR 59

Query: 84  NQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPENGVMAI 137
                         R+ + L   +   + A      D T   +               A+
Sbjct: 60  LNTKTQPRVAMCVSRLTQELFKYQGYKVCAIVLGGVDVTGPQLYGIHPHGSSCLLPFTAL 119

Query: 138 GSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI--CVYTNHNIVLETLKVG 188
           GSG   A++   A      + E   E+  +A  I A I   + +  N+ +  +   
Sbjct: 120 GSGSLNAMTVLEAKYRDNMTIEEGKELVCEA--ICAGIFNDLGSGGNVDICVITKD 173


>gi|328862302|gb|EGG11403.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
          Length = 201

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 63/191 (32%), Gaps = 13/191 (6%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++++  +++ +     V IA D ++      +  N  KV  +    +  G  G ++D  T
Sbjct: 1   MELNGGSVIAMVGKDCVAIACDLRLGNQALTVACNFEKVFPVTD-KVYIGLPGLASDTVT 59

Query: 71  LLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIAD---KTITLVIT 122
           L ++   ++  Y  +  R     +   L       K         +IA    K    +  
Sbjct: 60  LRQQFRHRVNMYKMKEERTIEPETMAHLVSSTLYQKRFGPYFVEPVIAGLNSKNEPFIAA 119

Query: 123 GMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNH 178
                 +      +  G+        A AL       E++     +++  A D   Y+  
Sbjct: 120 TDLIGCINFAKDFVVSGTASDKLFGMAEALWEPNLEPEDLFETISQSLMNAMDRDAYSGW 179

Query: 179 NIVLETLKVGD 189
             V+  ++   
Sbjct: 180 GAVVWIIQKDQ 190


>gi|167379227|ref|XP_001735049.1| proteasome subunit beta type-6 precursor [Entamoeba dispar SAW760]
 gi|165903089|gb|EDR28742.1| proteasome subunit beta type-6 precursor, putative [Entamoeba
           dispar SAW760]
          Length = 213

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M    + +  + +  TTI+ V  +G V++  DG+ S+G  V+    +   R+   +I   
Sbjct: 1   MEFTHNAYQPISL-GTTIIGVVYNGGVLLGADGRTSMGSIVVNR-CKNKIRMVSDSIGMC 58

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            AG+SA + T+ + +   L  Y  Q       LA        +   ++ +  +       
Sbjct: 59  MAGTSAHSETIADYVRHSLRMYTAQTREEPTVLAAATSTRNIIYGNKSFLSSSVICGGYD 118

Query: 121 ITGMGDVLEP-------ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                 +          ++ +   GSG +Y      A      + EE A++ +  A  + 
Sbjct: 119 SVNGATLYRILQSGAMKQDDICVGGSGSTYIWGYCDAHFKKDMTFEE-AKQFIITAVSLA 177

Query: 174 VY 175
           +Y
Sbjct: 178 IY 179


>gi|209878736|ref|XP_002140809.1| proteasome subunit beta type 6 precursor [Cryptosporidium muris
           RN66]
 gi|209556415|gb|EEA06460.1| proteasome subunit beta type 6 precursor, putative [Cryptosporidium
           muris RN66]
          Length = 213

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 11/186 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  TT++ ++    +++A D + S+G  V+  +ARK+ R+     I   +GS++D  T++
Sbjct: 14  MTGTTLVALKCRDGLILAADSRTSMGNMVVSRSARKITRITDKIFIC-RSGSASDTQTIV 72

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIADKTITL---VITGMG 125
           + + K    +  +L   +   +          +    L A +++A         +     
Sbjct: 73  QYVRKLTADHELELGEEARVKSVASLARIICYQNKEYLTAGLIVAGVDPYDGFKIFQIAL 132

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVL 182
                E      GSG +Y  S   A   T    +E    AR+ +S A      +   I +
Sbjct: 133 GGSMIEKSYALSGSGSAYIYSLLDATYHTNMDIDECKDFARRLVSHAIFRDSSSGGLIRM 192

Query: 183 ETLKVG 188
             +   
Sbjct: 193 VIITKE 198


>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
          Length = 730

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 59/197 (29%), Gaps = 16/197 (8%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +   +L +  +   ++A D ++S   ++   ++ K  +L    +I G +G   
Sbjct: 28  RFSPYAFNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVI-GCSGFHG 86

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITG 123
           D  TL + +E +L+        +   +       +         +I          V + 
Sbjct: 87  DCLTLTKIIETRLKMNKAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAVYSF 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNS----------AEEIARKAMSIAAD 171
                   + V A  S  +                S          A  + +     AA+
Sbjct: 147 DPVGSYQRDSVKAGASASATLQPLLHNQTGFRRMQSVEHVPRILDRAMRLVKDVFISAAE 206

Query: 172 ICVYTNHNIVLETLKVG 188
             VYT   + +  +   
Sbjct: 207 RDVYTGDALRICIVTKE 223


>gi|241957591|ref|XP_002421515.1| macropain subunit, putative; multicatalytic endopeptidase complex
           subunit, putative; proteasome component, putative
           [Candida dubliniensis CD36]
 gi|223644859|emb|CAX40854.1| macropain subunit, putative [Candida dubliniensis CD36]
          Length = 206

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 60/207 (28%), Gaps = 24/207 (11%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     + IA D ++      +  N  K+  +G    + G  G + 
Sbjct: 1   MSDPFSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS--VELAKDWRMDKYLRNLEAMI-------LIADKTI 117
           D  TL E    K   Y  +  R+     LA       Y R             L +    
Sbjct: 60  DVITLKELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++  +  +  G+          +L       E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRD 179

Query: 174 --------VY--TNHNIVLETLKVGDE 190
                   VY  T   ++   LK   +
Sbjct: 180 ALSGWGAVVYIVTKDKVIKRVLKTRQD 206


>gi|145256886|ref|XP_001401548.1| proteasome component PUP3 [Aspergillus niger CBS 513.88]
 gi|134058458|emb|CAL00667.1| unnamed protein product [Aspergillus niger]
          Length = 206

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 56/195 (28%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  K+   G    + G  G + 
Sbjct: 1   MSSPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTI 117
           D  T+ +    K+  Y  +  R  +   LA       Y +             + +    
Sbjct: 60  DVSTVSDLFRYKVNMYRLREERNIAPQTLANLVSSSLYEKRFGPFFVSPVIAGINSTTGK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+           L     S E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFAKDFIVSGTASEQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGAQVYIIEKD 194


>gi|121706806|ref|XP_001271634.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
 gi|119399782|gb|EAW10208.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
          Length = 206

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 56/193 (29%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
               ++    + +     V IA D ++ +    +  N  K+   G    + G  G + D 
Sbjct: 3   SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFL-GLTGLATDV 61

Query: 69  FTLLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTITL 119
            T+ +    K+  Y  +  R  +   LA       Y R             + +      
Sbjct: 62  NTVSDLFRFKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPF 121

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           +        ++     +  G+           L     S E++     +A+  A D    
Sbjct: 122 ICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDAL 181

Query: 176 TNHNIVLETLKVG 188
           +     +  ++  
Sbjct: 182 SGWGAQVYIIEKD 194


>gi|297701417|ref|XP_002827712.1| PREDICTED: proteasome subunit beta type-3-like isoform 1 [Pongo
           abelii]
 gi|297701419|ref|XP_002827713.1| PREDICTED: proteasome subunit beta type-3-like isoform 2 [Pongo
           abelii]
          Length = 218

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + L  +   +K         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSLVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHIIEKD 193


>gi|303390057|ref|XP_003073260.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
           ATCC 50506]
 gi|303302405|gb|ADM11900.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
           ATCC 50506]
          Length = 287

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 67/201 (33%), Gaps = 19/201 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +K    + ++ T + +++D  +++AGD + S    +      K+ R+G    +    G  
Sbjct: 78  EKFNPYEDNSGTTVCLKQDDFIIVAGDTRHSSDMVINSREMSKIFRMGNF--LLTGTGFY 135

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLV 120
           AD + +  ++  ++ QY      S    A       Y R              +K    +
Sbjct: 136 ADTYEVYRKMTDEILQYEVDGPMSIHSSANLLSKILYSRRFFPYYSFCTLSGFEKGKAYL 195

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSAEEIARKAMSI 168
                         +  GSG S       + +             +Q     +  KA + 
Sbjct: 196 YQYDPLGSYDLTTCVCKGSGRSMIQPLLDSFIDKKNWNNASDAQISQEDCIRLVVKAFNS 255

Query: 169 AADICVYTNHNIVLETLKVGD 189
            A+  + T  N+ +  ++  +
Sbjct: 256 VAERDIKTKDNLEIYVVREHE 276


>gi|302306791|ref|NP_983166.2| ABR217Cp [Ashbya gossypii ATCC 10895]
 gi|299788687|gb|AAS50990.2| ABR217Cp [Ashbya gossypii ATCC 10895]
          Length = 205

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 55/195 (28%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++   ++ +     V IA D ++      +     K+   G   +  G  G + 
Sbjct: 1   MSDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNRFEKIFNFGH--VFLGLTGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  Q  R                + R   Y        + +    
Sbjct: 59  DVTTLYETFRYKTNMYKMQEDRPIEPNTFSQLVSSTLYERRFGPYFVGPVVAGIHSKTKK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        +E     +  G+          +L      +E++     +A+  AAD  
Sbjct: 119 PYIAGFDLIGCIEESKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQALLNAADRD 178

Query: 174 VYTNHNIVLETLKVG 188
             +    V+  ++  
Sbjct: 179 ALSGWGAVVYLIEKD 193


>gi|224000415|ref|XP_002289880.1| 20S proteasome subunit beta type 6 precursor [Thalassiosira
           pseudonana CCMP1335]
 gi|220975088|gb|EED93417.1| 20S proteasome subunit beta type 6 precursor [Thalassiosira
           pseudonana CCMP1335]
          Length = 207

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 54/169 (31%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +   G  V+  D +VS G  V    + K+ +L         +GS+AD   L + 
Sbjct: 6   GTTIMAIAFPGGAVLCADSRVSTGSYVANRASDKIAQLHDHIWCC-RSGSAADTQALTDY 64

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L Q   +  R          M +     +  ++               V       
Sbjct: 65  VRHYLAQLAVETGRVPEVKVAAHLMRRLCYENKDNLMAGVIVGGWDPVSGGSVYNIPLGG 124

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
                     GSG ++      +      S EE   + +KA+S A    
Sbjct: 125 ACIPMPFAIGGSGSTFIYGLVDSEYKEAMSKEEALLLCKKAVSHAMARD 173


>gi|116806958|emb|CAL26905.1| CG8392 [Drosophila simulans]
          Length = 224

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ R+    +    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITD-KVYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  + NQ  + ++          Y       +L               V +     
Sbjct: 74  VAYSLNYHENQTNKDALVFEAASEFRNYCYGYRESLLAGIIVAGWDEQRGGQVYSIPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R       + E+     +KA+  A      +   + +  
Sbjct: 134 MLTREACTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKD 197


>gi|291237252|ref|XP_002738545.1| PREDICTED: proteasome beta 9 subunit isoform 1 proprotein-like
           isoform 1 [Saccoglossus kowalevskii]
          Length = 233

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 60/186 (32%), Gaps = 11/186 (5%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  T+I+ V     VVI  D + + G  +      K+  + +       +GS+A    + 
Sbjct: 31  MTGTSIMAVEFKDGVVIGADSRTTTGAYIANRVTDKLTPVHERIYCC-RSGSAAATQAVA 89

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMG 125
           + +   L  +  ++    +              Y   L A I+ A         V T   
Sbjct: 90  DIVSYHLNFHSIEMNEPPLVKTAANLFKEMCYNYRDELTAGIICAGWDEREGGQVYTIPL 149

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVL 182
             +         GSG +Y      +      + EE  +    ++++A +    +   + L
Sbjct: 150 GGMLLRQPFSIGGSGSTYIYGYVDSSFKKDMTKEECLKFCAHSLALAMNRDGSSGGVVRL 209

Query: 183 ETLKVG 188
             +   
Sbjct: 210 AAITKE 215


>gi|8117714|gb|AAF72737.1|AF097521_1 proteasome B type subunit [Cryptosporidium parvum]
          Length = 210

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ ++    +V+A DG+ S G  +    ARK+ ++    +    +GS+AD   +   
Sbjct: 13  GTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKITQITD-KVFMCRSGSAADTQIISRY 71

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           + + ++ +  +    +   +          +   +L A ++IA         V       
Sbjct: 72  VRRIVQDHELETGEDTKVKSVASVARLISYQNKEHLLADMIIAGMDPNGEFKVFRIPLGG 131

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              E      GSG  Y  S   +   ++   +E    AR  +S A      +   I +  
Sbjct: 132 TLIEGSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDSSSGGIIRIIV 191

Query: 185 LKV 187
           +  
Sbjct: 192 INK 194


>gi|149054060|gb|EDM05877.1| rCG33987, isoform CRA_d [Rattus norvegicus]
          Length = 202

 Score = 91.6 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 14/191 (7%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D  T
Sbjct: 1   MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDVQT 59

Query: 71  LLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TLVI 121
           + +RL+ +L  Y  +  R     + + +  +   +K         +IA          + 
Sbjct: 60  VAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFIC 119

Query: 122 TGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
           +          +  +  G+          +L       E +     +AM  A D    + 
Sbjct: 120 SLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSG 179

Query: 178 HNIVLETLKVG 188
             +++  ++  
Sbjct: 180 MGVIVHIIEKD 190


>gi|145603039|ref|XP_362106.2| 20S proteasome peptidase [Magnaporthe oryzae 70-15]
 gi|145011369|gb|EDJ96025.1| 20S proteasome peptidase [Magnaporthe oryzae 70-15]
          Length = 206

 Score = 91.6 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 54/195 (27%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  K+      ++  G  G + 
Sbjct: 1   MSSPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIF-SYSSSVFLGLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  T+ +    K+  Y  +  R+                 R   Y  +     L      
Sbjct: 60  DVATVSDLFRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGA 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFAKDFIVSGTASEQLFGMCESLWEPDLGPEDLFETISQALLSAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGAHVYIIEKD 194


>gi|6755202|ref|NP_036101.1| proteasome subunit beta type-3 [Mus musculus]
 gi|9910831|sp|Q9R1P1|PSB3_MOUSE RecName: Full=Proteasome subunit beta type-3; AltName:
           Full=Proteasome chain 13; AltName: Full=Proteasome
           component C10-II; AltName: Full=Proteasome theta chain
 gi|5757661|gb|AAD50537.1|AF060092_1 proteasome subunit C10-II [Mus musculus]
 gi|12832232|dbj|BAB22017.1| unnamed protein product [Mus musculus]
 gi|12845973|dbj|BAB26979.1| unnamed protein product [Mus musculus]
 gi|15928628|gb|AAH14783.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
 gi|68085773|gb|AAH98233.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
 gi|74139857|dbj|BAE31772.1| unnamed protein product [Mus musculus]
 gi|123241722|emb|CAM27414.1| proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
 gi|148684145|gb|EDL16092.1| mCG13231, isoform CRA_b [Mus musculus]
          Length = 205

 Score = 91.6 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + +  +   +K         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHVIEKD 193


>gi|207345904|gb|EDZ72572.1| YER094Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 187

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 15/184 (8%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++   ++ +     V IA D ++      +     K+   G   +  G  G + 
Sbjct: 1   MSDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGH--VFLGITGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  +  R+               + R   Y        + +    
Sbjct: 59  DVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       E++     +A+  AAD  
Sbjct: 119 PFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRD 178

Query: 174 VYTN 177
             + 
Sbjct: 179 ALSG 182


>gi|308321183|gb|ADO27744.1| proteasome subunit beta type-3 [Ictalurus furcatus]
          Length = 205

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A D 
Sbjct: 118 EPFICSLDQIGCPMITEDFVVSGTCAEQMYGMCESLWEPDMGPEDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +++  ++  
Sbjct: 178 DAVSGMGVIVHVIEKD 193


>gi|157864139|ref|XP_001680783.1| 20S proteasome beta 6 subunit; proteasome beta 6 subunit
           [Leishmania major strain Friedlin]
 gi|68124075|emb|CAJ02057.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
           Friedlin]
          Length = 247

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 64/201 (31%), Gaps = 21/201 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKA-NARKVRRLGKGNIIA--GFAGSS 65
                +  T   +     V++AGD +++    +    +  K+ +L     +A  G     
Sbjct: 35  SPYHDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADR 94

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-----MILIADKTITLV 120
                +L+   K  +      +  +  +A+      Y R         M++  D+    V
Sbjct: 95  LQLQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHGV 154

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---------TQNSAEE---IARKAMS 167
             +               GS  S+       L++          + + EE   + + A +
Sbjct: 155 CYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLALLKNAFT 214

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  +YT  ++    +   
Sbjct: 215 GAAERDIYTGDSVSFFIITKD 235


>gi|331231656|ref|XP_003328491.1| proteasome subunit 1 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309307481|gb|EFP84072.1| proteasome subunit 1 [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 219

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  +G VVI  D + + G  +      K+  +    +    +GS+AD   + + 
Sbjct: 18  GTSIMAVAFEGGVVIGADSRTTSGSYIANRVTDKLTHIHD-RVYCCRSGSAADTQAVADY 76

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--------VITGMGD 126
           +    + Y  Q   +          ++   + +  +                 V      
Sbjct: 77  VHLYCQMYTAQHGHAPSVHTVGTIFEQICYSNKDNLSAGIIVAGWDAQTKKGSVYNIPLG 136

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLE 183
               +      GSG +Y      +      + EE     + A+++A      +   I + 
Sbjct: 137 GGLFQQPWAIGGSGSTYIYGYCDSNYRAGWTKEETVGFVKNALALAMSRDGSSGGTIRMA 196

Query: 184 TLKVG 188
            +   
Sbjct: 197 IITED 201


>gi|123296530|emb|CAM26267.1| proteasome (prosome, macropain) subunit beta type 9 (large
           multifunctional protease 2) [Homo sapiens]
 gi|168983778|emb|CAQ08910.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985351|emb|CAQ08499.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
          Length = 196

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 10/178 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + +    +
Sbjct: 1   MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHEHIYCA-LSGSAADAQAVADMAAYQ 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVLEPEN 132
           LE +  +L    + LA    +               M+   D+     + G    +    
Sbjct: 60  LELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGMLTRQ 119

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
                GSG ++      A      S EE  R    A+++A      +   I L T+  
Sbjct: 120 PFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTITA 177


>gi|126308249|ref|XP_001371633.1| PREDICTED: similar to proteasome subunit RC10-II [Monodelphis
           domestica]
          Length = 202

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 20/194 (10%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D  T
Sbjct: 1   MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDVQT 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           + +RL+ +L  Y  +  R          +   L            T  ++        EP
Sbjct: 60  VAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYY---TEPVIAGLHPKTFEP 116

Query: 131 E-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
                         +  +  G+          +L       E +     +AM  A D   
Sbjct: 117 FICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDA 176

Query: 175 YTNHNIVLETLKVG 188
            +   +++  ++  
Sbjct: 177 VSGMGVIVHIIEKD 190


>gi|318102146|ref|NP_001188163.1| proteasome subunit beta type-3 [Ictalurus punctatus]
 gi|308323613|gb|ADO28942.1| proteasome subunit beta type-3 [Ictalurus punctatus]
          Length = 205

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A D 
Sbjct: 118 EPFICSLDLIGCPMITEDFVVSGTCAEQMYGMCESLWEPDMGPEDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +++  ++  
Sbjct: 178 DAVSGMGVIVHVIEKD 193


>gi|209733400|gb|ACI67569.1| Proteasome subunit beta type-3 [Salmo salar]
          Length = 205

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPENG-------------VMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A D 
Sbjct: 118 EPFICSLDLIGCPMVTKDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V++ ++  
Sbjct: 178 DAVSGMGVVVQAIEKD 193


>gi|10803372|emb|CAC13119.1| low molecular mass polypeptide subunit PSMB9-L [Takifugu rubripes]
          Length = 217

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 63/183 (34%), Gaps = 12/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL    DG VVI  D + S+ G+ V      KV ++         AGS ADA  + +
Sbjct: 16  GTTILAATFDGGVVIGSDSRASMGGEYVSSKTINKVIKVHDRIFCC-MAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             +  L  +  Q+    + ++          +    L+A  + A         V      
Sbjct: 75  AAKFHLSFHSVQMETPPLVISAASVLKELCYQNKEELQAGFITAGWDSRKGPQVYVVALG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +     V   GSG SY      A      S EE    A  A+++A      +     L 
Sbjct: 135 GMLVRQPVTIGGSGSSYIYGYVDAKYKPNMSREECLQFATNALALAMGRDNVSGGVANLV 194

Query: 184 TLK 186
            + 
Sbjct: 195 VIT 197


>gi|50311275|ref|XP_455662.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644798|emb|CAG98370.1| KLLA0F12936p [Kluyveromyces lactis]
          Length = 215

 Score = 91.6 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 65/183 (35%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTKVHDKIWCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMGDVL 128
           ++  LE Y +Q    + ++A         +   +L A I++A    K    V +      
Sbjct: 78  VQYHLELYTSQYGEPTTKVAASIFKTLCYENKDHLTAGIIVAGYDEKNKGEVYSIPLGGS 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +      GSG ++             + E   E  + ++S A      +   I +  L
Sbjct: 138 VHKQSYSIAGSGSAFIYGYCDKNYKEDMTKEETIEFVKHSLSQAIKWDGSSGGVIRMVVL 197

Query: 186 KVG 188
              
Sbjct: 198 TAE 200


>gi|57091113|ref|XP_537658.1| PREDICTED: similar to Proteasome subunit beta type 3 (Proteasome
           theta chain) (Proteasome chain 13) (Proteasome component
           C10-II) [Canis familiaris]
          Length = 205

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + +  +   +K         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHIIEKD 193


>gi|90077008|dbj|BAE88184.1| unnamed protein product [Macaca fascicularis]
          Length = 202

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 11/177 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + +  +
Sbjct: 1   MAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADAVTYQ 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPE 131
           L  +  +L    +         +        ++          +    V +         
Sbjct: 60  LGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGTMVR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                 GSG SY      A      + EE  +    A+++A +    +   I L  +
Sbjct: 120 QSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAI 176


>gi|8394082|ref|NP_058981.1| proteasome subunit beta type-3 [Rattus norvegicus]
 gi|730380|sp|P40112|PSB3_RAT RecName: Full=Proteasome subunit beta type-3; AltName:
           Full=Proteasome chain 13; AltName: Full=Proteasome
           component C10-II; AltName: Full=Proteasome theta chain
 gi|458731|dbj|BAA04824.1| proteasome subunit RC10-II [Rattus sp.]
 gi|54261675|gb|AAH84723.1| Proteasome (prosome, macropain) subunit, beta type 3 [Rattus
           norvegicus]
 gi|149054057|gb|EDM05874.1| rCG33987, isoform CRA_a [Rattus norvegicus]
          Length = 205

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 14/191 (7%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D  T
Sbjct: 4   MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDVQT 62

Query: 71  LLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TLVI 121
           + +RL+ +L  Y  +  R     + + +  +   +K         +IA          + 
Sbjct: 63  VAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFIC 122

Query: 122 TGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
           +          +  +  G+          +L       E +     +AM  A D    + 
Sbjct: 123 SLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSG 182

Query: 178 HNIVLETLKVG 188
             +++  ++  
Sbjct: 183 MGVIVHIIEKD 193


>gi|67621564|ref|XP_667771.1| proteasome B type subunit [Cryptosporidium hominis TU502]
 gi|54658945|gb|EAL37551.1| proteasome B type subunit [Cryptosporidium hominis]
          Length = 210

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ ++    +V+A DG+ S G  +    ARK+ ++    +    +GS+AD   +   
Sbjct: 13  GTTIVALKYKHGLVLAADGRTSTGPIIAFRAARKITQITD-KVFMCRSGSAADTQIISRY 71

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           + + ++ +  +    +   +          +   +L A ++IA         V       
Sbjct: 72  VRRIVQDHELETGEDTKVKSVASVARLISYQNKEHLLADMIIAGMDPNGEFKVFRIPLGG 131

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              E      GSG  Y  S   +   ++   +E    AR  +S A      +   I +  
Sbjct: 132 TLIEGSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDSSSGGIIRIIV 191

Query: 185 LKV 187
           +  
Sbjct: 192 IDK 194


>gi|68488966|ref|XP_711676.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
 gi|77023006|ref|XP_888947.1| hypothetical protein CaO19_1336 [Candida albicans SC5314]
 gi|46432996|gb|EAK92454.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
 gi|76573760|dbj|BAE44844.1| hypothetical protein [Candida albicans]
 gi|238883475|gb|EEQ47113.1| proteasome component PUP3 [Candida albicans WO-1]
          Length = 206

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 60/207 (28%), Gaps = 24/207 (11%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     + IA D ++      +  N  K+  +G    + G  G + 
Sbjct: 1   MSDPFSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS--VELAKDWRMDKYLRNLEAMI-------LIADKTI 117
           D  +L E    K   Y  +  R+     LA       Y R             L +    
Sbjct: 60  DVISLKELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++  +  +  G+          +L       E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRD 179

Query: 174 --------VY--TNHNIVLETLKVGDE 190
                   VY  T   ++   LK   +
Sbjct: 180 ALSGWGAVVYIVTKDKVIKRVLKTRQD 206


>gi|242018983|ref|XP_002429948.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
 gi|212514994|gb|EEB17210.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
          Length = 190

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 52/177 (29%), Gaps = 14/177 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +   ++ V     V IA D +  +G   +  N +K+  +G    + G  G + D  T+ +
Sbjct: 7   NGGAVVAVTGKNCVAIASDRRFGVGAQTISCNFQKIFEMGPHLYV-GLPGLATDTQTVYQ 65

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------- 125
           RL  +L  Y  +  R          M   L          +  +  +    G        
Sbjct: 66  RLRFRLNLYELKEGRKIAPKTFSHMMSNLLYERRFGPYFVEPVVAGLDPTTGKPFVCNMD 125

Query: 126 --DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTN 177
                      +  G+           L       +E+     +A+  A D    + 
Sbjct: 126 LIGCPNMPEDFVVAGTCSEQLYGMCETLWEPNLEPDELFEVVSQALVNACDRDAISG 182


>gi|119586598|gb|EAW66194.1| proteasome (prosome, macropain) subunit, beta type, 5, isoform
           CRA_b [Homo sapiens]
          Length = 148

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 1/113 (0%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G  +     +KV  +    ++   AG +AD     
Sbjct: 2   LHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPY-LLGTMAGGAADCSFWE 60

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
             L ++   Y  +        A    +   +   + M L     I        
Sbjct: 61  RLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGP 113


>gi|327275596|ref|XP_003222559.1| PREDICTED: proteasome subunit beta type-3-like [Anolis
           carolinensis]
          Length = 205

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLFI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L            T  ++        
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYY---TEPVIAGLDPITY 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP              +  +  G+          +L       + +     +AM  A D 
Sbjct: 118 EPFVCSLDLIGCPMTTDDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETIGQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V+  ++  
Sbjct: 178 DAVSGMGVVVHVIEKD 193


>gi|301762874|ref|XP_002916854.1| PREDICTED: proteasome subunit beta type-3-like [Ailuropoda
           melanoleuca]
          Length = 202

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 67/191 (35%), Gaps = 14/191 (7%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D  T
Sbjct: 1   MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDVQT 59

Query: 71  LLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TLVI 121
           + +RL+ +L  Y  +  R     + + +  +   ++         +IA          + 
Sbjct: 60  VAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFIC 119

Query: 122 TGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
           +          +  +  G+          +L       E +     +AM  A D    + 
Sbjct: 120 SLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSG 179

Query: 178 HNIVLETLKVG 188
             +++  ++  
Sbjct: 180 MGVIVHIIEKD 190


>gi|257053725|ref|YP_003131558.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
 gi|302595737|sp|C7NQ99|PSB_HALUD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|256692488|gb|ACV12825.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
          Length = 234

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 10/177 (5%)

Query: 21  VRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           +  +  VVIA D + SLG   V   N  KV  +          GS   A + +  L  + 
Sbjct: 45  LATEEGVVIATDRRASLGGRFVSNKNVVKVEEIHP-TAAMTLVGSVGGAQSFIRTLRSEA 103

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRN-----LEAMILIADKTITLVITGMGDVLEPENGV 134
             Y  +        A       + R      +  ++   D   + V T        E+  
Sbjct: 104 SLYETRRDEPMSINALATLAGNFARGGPFLAIHPILGGVDDEGSHVYTIDPAGGVMEDDY 163

Query: 135 MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
              GSG   A         +  S   A+E+A  A+  A++    + + +V+  +   
Sbjct: 164 AVTGSGMQVAYGTIEGEYESDLSTEEAKELATNAVQAASERDTGSGNGLVIAEITDE 220


>gi|156389516|ref|XP_001635037.1| predicted protein [Nematostella vectensis]
 gi|156222126|gb|EDO42974.1| predicted protein [Nematostella vectensis]
          Length = 205

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +   I+ +     V IA D ++ +    +  + +K+ ++G+  +  G  G + D 
Sbjct: 2   SIMEYNGAAIIAMVGKNCVAIAADRRLGIQAQTVSCDFQKIFQMGE-KLFVGLPGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTITL 119
            T+  RL+ +L  Y  +  R             L  + R   Y        L        
Sbjct: 61  QTISSRLKFRLNLYELREGRPIKPKTFLSMVSNLLYERRFGPYFVEPVIAGLDPKTNEPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
           + +    G  +E ++  +  G+          +L       +++     +A+  A D   
Sbjct: 121 ISSMDLIGCPMETKD-FVVSGTCSEQMYGMCESLWVPDLEPDDLFETISQALLNAVDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +    V+  ++  
Sbjct: 180 VSGWGAVVHVIEPD 193


>gi|224473797|gb|ACN49141.1| proteasome beta 9 subunit [Oryzias dancena]
 gi|224473814|gb|ACN49155.1| proteasome beta 9 subunit [Oryzias dancena]
          Length = 216

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 10/168 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G +V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 17  GTTIIAIEFDGGVVLGSDSRVSAGASVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEM 75

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +  +L+ +  ++       +          KY   L A +++A  D+     +      L
Sbjct: 76  VNYQLDVHSIEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRREGGQVFATLSGL 135

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
                    GSG SY      A      + EE        +++A +  
Sbjct: 136 LTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRD 183


>gi|253746973|gb|EET01937.1| Proteasome subunit beta type 9 precursor [Giardia intestinalis ATCC
           50581]
          Length = 221

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSA--DAFT 70
            TTI+ ++  G V+++ D + ++G  V+     K+  +       IAG    +       
Sbjct: 25  GTTIIVMKYAGGVLLSADTRATMGNLVVDRFTPKILPITDKIYTCIAGSVSHAQFLVNEV 84

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGM 124
               + ++++ + N      +       +  YL            +   D T    I  M
Sbjct: 85  RAHLMTQQMDLHANLNGMDPMVATAANILSIYLHKYREFLHAAFILGGVDNTGFHCINAM 144

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIV 181
                 E      GSGG +     + L   + +   A ++A K +  A  +   +   + 
Sbjct: 145 IGGSVLEEDYAISGSGGVFIKGLMKELYKPELTRAEAIDLACKLLRTAISLDTKSGGFMR 204

Query: 182 LETLK 186
              ++
Sbjct: 205 FVAIE 209


>gi|145514570|ref|XP_001443190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410568|emb|CAK75793.1| unnamed protein product [Paramecium tetraurelia]
          Length = 204

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 69/204 (33%), Gaps = 22/204 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                + +  +I+ ++    + +A D +     + +  N +KV ++    ++A  +G ++
Sbjct: 1   MSGIFEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLA-LSGLNS 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWR--MDKYLRNLEAMILIA-----DKTITL 119
           D  T    +EK++  Y  +  R               Y R      +       +    +
Sbjct: 60  DIHTFYALMEKEINLYNLKENRKMKPSTFANLVASSLYERRFGPFFVTPIVAGLENGKPI 119

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC-- 173
           + T          +     G+GG+Y   A  A      S EE+     +++    D    
Sbjct: 120 LATYDSIGCKSDLDDFQVGGTGGNYIYGACEAFFKPDLSPEELEEVIGQSLVSGCDRDSL 179

Query: 174 ------VY--TNHNIVLETLKVGD 189
                 VY  T   + ++ LK   
Sbjct: 180 SGWGGVVYVLTEQKLTVKILKTKQ 203


>gi|8567394|ref|NP_038613.1| proteasome subunit beta type-9 [Mus musculus]
 gi|984353|gb|AAA75306.1| 20S proteasome subunit Lmp2 [Mus musculus]
 gi|2073368|dbj|BAA19855.1| low-molecular-weight polypeptide 2 [Mus musculus]
 gi|2467361|dbj|BAA22582.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
           molossinus]
 gi|2555189|gb|AAB81528.1| 20S proteasome subunit lmp2 [Mus musculus]
 gi|12842607|dbj|BAB25664.1| unnamed protein product [Mus musculus]
          Length = 219

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQHIFCA-LSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +          +L        D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQCEGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|84996531|ref|XP_952987.1| proteasome subunit [Theileria annulata strain Ankara]
 gi|65303983|emb|CAI76362.1| proteasome subunit, putative [Theileria annulata]
          Length = 199

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 20/195 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           ++      +  T++    +   VIA D ++S    +    + K+ +L    I+ G +G  
Sbjct: 6   ERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCIL-GTSGMQ 64

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD   L   LE+++E Y     R     A    +   L                 D+   
Sbjct: 65  ADMLALQSVLERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGK 124

Query: 119 LVITGMGDVL-EPENGVMAIGSGGSYALSAARALMSTQN-----------SAEEIARKAM 166
            V+ G   V         A G+  S  +S    L++  N               + + AM
Sbjct: 125 GVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAM 184

Query: 167 SIAADICVYTNHNIV 181
             A +  + T ++  
Sbjct: 185 VSAVERDICTGNHHS 199


>gi|238491746|ref|XP_002377110.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
 gi|317146166|ref|XP_001821334.2| proteasome component PUP3 [Aspergillus oryzae RIB40]
 gi|220697523|gb|EED53864.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
          Length = 206

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 56/195 (28%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  K+        + G  G + 
Sbjct: 1   MSSPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTI 117
           D  T+ +    K+  Y  +  R  +   LA       Y R             + +    
Sbjct: 60  DVSTVSDLFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L     + E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFAKDFIVSGTASDQLFGTCESLWEPDLAPEDLFETISQALLSAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGAQVYIIEKD 194


>gi|61612096|gb|AAX47290.1| proteasome beta 1 subunit [Clonorchis sinensis]
          Length = 217

 Score = 91.2 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 62/206 (30%), Gaps = 22/206 (10%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGF 61
           M    Y    +  T++ +  D   ++A D ++       +   N+  + ++G G ++A  
Sbjct: 1   MSGGFYPYSANGGTVMGISGDDFALLASDTRLCAEDRYFIYSRNSPHLYKMGNGKVLAT- 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV- 120
            G   D  TL + LE +++ Y     +     A    +   L             +  + 
Sbjct: 60  TGFHGDVLTLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSILGGLD 119

Query: 121 -------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNS----------AEEIA 162
                                 A GS G          +     S          A ++A
Sbjct: 120 EEGRGAVYRYDPVGSFERVKCAAAGSSGVILQPFLDHRVEGKNLSSGLPPLEKAEAIKLA 179

Query: 163 RKAMSIAADICVYTNHNIVLETLKVG 188
           +     AA+  +     ++++ +   
Sbjct: 180 KDIFISAAERDINCGDAVLIQVITRD 205


>gi|255950036|ref|XP_002565785.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592802|emb|CAP99170.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 206

 Score = 91.2 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 21/195 (10%), Positives = 52/195 (26%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  K+        + G  G + 
Sbjct: 1   MSNPFDINGGACVAMVGKDCVAIACDLRLGMQSLTISNNFPKIFNYAPSTYL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  T+ +    K+  Y  +  R                  R   Y  +     +      
Sbjct: 60  DVNTVSDLFRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVIAGINPTTGK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+           L     + E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLAPEDLFETISQALLSAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGAQVYIIEKD 194


>gi|298709479|emb|CBJ31383.1| proteasome subunit beta 2 [Ectocarpus siliculosus]
          Length = 323

 Score = 91.2 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 61/217 (28%), Gaps = 43/217 (19%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V  +G VV+  D + + G+TV   N  K+  L       G   S+         
Sbjct: 4   GTTIAGVVFEGGVVLGADTRATGGKTVCDRNCDKIHILASNIACCGAGTSADAVRITEGA 63

Query: 75  LEKKLEQ--------------------------------------YPNQLLRSSVELAKD 96
               L                                            L   +  L   
Sbjct: 64  RLALLRMAREMQACLPSSRSPLLQCQSRADEERALASCDSGLDEVQRKHLRVGAAALLLK 123

Query: 97  WRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
             + +Y   + A +++   D     +          E    A+GSG   ALS        
Sbjct: 124 RHLFRYQGTVSAALVLGGVDVIGEHIYQIHEGGSLAEVEFTAMGSGSLAALSVLERGYRE 183

Query: 155 QNS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
             +   A+E+  + ++   D  + +  NI L  +   
Sbjct: 184 NLTEQEAKELVLEGIAAGIDNDLGSGSNIDLCVITAE 220


>gi|255731824|ref|XP_002550836.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
 gi|240131845|gb|EER31404.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
          Length = 206

 Score = 91.2 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 57/207 (27%), Gaps = 24/207 (11%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     + IA D ++      +  N  K+  +     + G  G ++
Sbjct: 1   MSDPFSINGGAAVAMIGKECIAIASDLRLGQQSLGVSNNFEKIFEISPKTYL-GLTGLAS 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS--VELAKDWRMDKYLRNLEAMI-------LIADKTI 117
           D  TL E    K   Y  +   S     LA       Y R             L +    
Sbjct: 60  DVLTLKELFRFKTNLYKLREDHSIEPSTLANLISSSLYERRFGPWFVSPIVAGLDSKTNK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++  +  +  G+          +L       EE+     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDYSHDFIVSGTASDQLYGMCESLYEPNLEPEELFETISQALLNAVDRD 179

Query: 174 ----------VYTNHNIVLETLKVGDE 190
                     + T   +    LK   +
Sbjct: 180 ALSGWGAVVYIITKDKVTKRVLKTRQD 206


>gi|50556048|ref|XP_505432.1| YALI0F14861p [Yarrowia lipolytica]
 gi|49651302|emb|CAG78241.1| YALI0F14861p [Yarrowia lipolytica]
          Length = 217

 Score = 91.2 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V+    VV+  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVKFKDGVVLGADSRTTTGAFIANRVTDKLTQVHDKIWCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIA---DKTITLVITGMGDV 127
           +   L+ Y  Q  +                    NL A I++A   DK    V +     
Sbjct: 78  VTYHLQSYAAQNDKDPSTKVAASMFQELCYNNKDNLTAGIIVAGYDDKNGGEVYSIPLGG 137

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y     +       + +E     + +++ A      +   I +  
Sbjct: 138 SLHKQDYAIAGSGSTYIYGLCQKNFKQDMTKDECVLFIKNSLAQAIKWDGSSGGVIRICI 197

Query: 185 LKVG 188
           L   
Sbjct: 198 LTKD 201


>gi|319996713|ref|NP_001188447.1| proteasome subunit, beta type 9-like [Oryzias latipes]
 gi|18157531|dbj|BAB83846.1| PSMB9-like [Oryzias latipes]
 gi|295901528|dbj|BAJ07281.1| proteasome subunit, beta type 9-like [Oryzias latipes]
          Length = 217

 Score = 90.8 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL    DG VVI  D + S+ G+ V      KV ++         AGS ADA  + +
Sbjct: 16  GTTILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCC-MAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + +L  +  Q+    + ++               L+A  + A         V      
Sbjct: 75  TAKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEELQAGFITAGWDKKKGPQVYVVSLG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +     V   GSG +Y      A      + EE    A  A+++A      +     L 
Sbjct: 135 GMMISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVANLV 194

Query: 184 TLKVG 188
            +   
Sbjct: 195 VITKE 199


>gi|193788711|ref|NP_001123295.1| proteasome subunit beta type-3 [Danio rerio]
 gi|29124577|gb|AAH49010.1| Psmb3 protein [Danio rerio]
          Length = 205

 Score = 90.8 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +   ++  + +K+  +G+   I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E++     +AM  A D 
Sbjct: 118 EPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMKPEDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V+  ++  
Sbjct: 178 DAVSGMGVVVHVIEKD 193


>gi|310793894|gb|EFQ29355.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 205

 Score = 90.8 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 55/195 (28%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ L    +  N  K+ + G   +  G  G + 
Sbjct: 1   MSSPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD--VFLGLTGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTI 117
           D  T+ +    K+  Y  +  R  +    A       Y R             L      
Sbjct: 59  DVTTVGDLFRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       EE+     +++  A D  
Sbjct: 119 PFICGFDSIGCIDFAKDFIVSGTASEQLFGMCESLWEPDLGPEELFETISQSLLNAVDRD 178

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 179 ALSGWGAHVYIIEKD 193


>gi|148678311|gb|EDL10258.1| proteosome (prosome, macropain) subunit, beta type 9 (large
           multifunctional peptidase 2), isoform CRA_b [Mus
           musculus]
          Length = 219

 Score = 90.8 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQHIFCA-LSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +          +L        D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|195029659|ref|XP_001987689.1| GH19825 [Drosophila grimshawi]
 gi|193903689|gb|EDW02556.1| GH19825 [Drosophila grimshawi]
          Length = 222

 Score = 90.8 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ ++    I    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTQISD-KIYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL-VITGMGDV 127
           +   L  + NQ  +  +          +  N    +L        D+     V +     
Sbjct: 74  VAYSLNYHRNQTSKEPLVWEAASEFRNFCYNYRDSLLAGIIVAGWDEERGGQVYSVPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R         EE     +KA+  A      +   + +  
Sbjct: 134 MLTRESCTIGGSGSSFIYGFVREHYRPGMPKEECIEFVKKAVQHAIFHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 IDKD 197


>gi|114606767|ref|XP_001167369.1| PREDICTED: similar to LMP2 isoform 1 [Pan troglodytes]
 gi|114606769|ref|XP_001167399.1| PREDICTED: similar to LMP2 isoform 2 [Pan troglodytes]
 gi|119624058|gb|EAX03653.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2), isoform CRA_a [Homo
           sapiens]
 gi|123121512|emb|CAM24981.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|123239246|emb|CAM25803.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|123291821|emb|CAM25487.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168984799|emb|CAQ08453.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985580|emb|CAQ10291.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
          Length = 196

 Score = 90.8 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 10/178 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + +    +
Sbjct: 1   MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCA-LSGSAADAQAVADMAAYQ 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVLEPEN 132
           LE +  +L    + LA    +               M+   D+     + G    +    
Sbjct: 60  LELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGMLTRQ 119

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
                GSG ++      A      S EE  R    A+++A      +   I L T+  
Sbjct: 120 PFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTITA 177


>gi|222136592|ref|NP_001138374.1| proteasome subunit beta type-3 [Sus scrofa]
          Length = 205

 Score = 90.8 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + +  +   ++         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPDMDPEHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHVIEKD 193


>gi|509035|dbj|BAA40680.1| LMP-2 polypeptide [Mus musculus]
 gi|984355|gb|AAA75307.1| 20S proteasome subunit Lmp2 [Mus musculus]
 gi|2467347|dbj|BAA22575.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
           castaneus]
 gi|2467353|dbj|BAA22578.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
           molossinus]
 gi|30027662|gb|AAP13903.1| proteasome subunit [Mus sp.]
 gi|74152640|dbj|BAE42601.1| unnamed protein product [Mus musculus]
          Length = 219

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 68/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L    I    +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPL-HQRIFCALSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +          +L        D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|70987129|ref|XP_749045.1| proteasome component Pre3 [Aspergillus fumigatus Af293]
 gi|66846675|gb|EAL87007.1| proteasome component Pre3, putative [Aspergillus fumigatus Af293]
 gi|159123184|gb|EDP48304.1| proteasome component Pre3, putative [Aspergillus fumigatus A1163]
          Length = 221

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 52/183 (28%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 17  GTSIMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y                  +     + M+                V +     
Sbjct: 76  VSYHLNMYGIVNNEPPSTQVAAALFQELCYENKDMLSAGIIIAGYDPRHGGQVYSIPLGG 135

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + EE     R A+  A      +   I L  
Sbjct: 136 SLHKQPYAIGGSGSTYIYGYCDAHWKENMTEEEGIKFVRDALQEAIKWDGSSGGVIRLVV 195

Query: 185 LKV 187
           L  
Sbjct: 196 LTS 198


>gi|149724511|ref|XP_001501618.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
           type, 3 [Equus caballus]
          Length = 202

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 14/191 (7%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D  T
Sbjct: 1   MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDVQT 59

Query: 71  LLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TLVI 121
           + +RL+ +L  Y  +  R     + + +  +   +K         +IA          + 
Sbjct: 60  VAQRLKFRLNLYELKEGRQIKPQTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFIC 119

Query: 122 TGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
           +          +  +  G+          +L       E +     +AM  A D    + 
Sbjct: 120 SLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSG 179

Query: 178 HNIVLETLKVG 188
             +++  ++  
Sbjct: 180 MGVIVHIIEKD 190


>gi|19075485|ref|NP_587985.1| 20S proteasome component beta 3, Pup3 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|17380272|sp|Q9Y7T8|PSB3_SCHPO RecName: Full=Probable proteasome subunit beta type-3
 gi|4539605|emb|CAB40016.1| 20S proteasome component beta 3, Pup3 (predicted)
           [Schizosaccharomyces pombe]
          Length = 204

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 59/192 (30%), Gaps = 13/192 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +  + + +     V IA D ++ +    +  N  KV  +G    + G  G + D 
Sbjct: 2   SIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYL-GLTGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIA---DKTITLV 120
            TL E    K+  Y  +  R          +      K      +  ++A   +     +
Sbjct: 61  QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYT 176
                   ++     +  G+          ++       +++     +A+  A D    +
Sbjct: 121 CGFDSIGCIDFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCIS 180

Query: 177 NHNIVLETLKVG 188
               V+  +   
Sbjct: 181 GWGCVVYVITAD 192


>gi|328864212|gb|AEB53189.1| proteasome subunit beta type 3 [Holothuria glaberrima]
          Length = 202

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 60/194 (30%), Gaps = 20/194 (10%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  + + I+ +R    V IA D +  +    +    +K+  +     I G +G + D  T
Sbjct: 1   MSYNGSAIVAMRGKDCVAIASDRRFGIQAQTVSMECQKIFEMAPRLYI-GLSGLATDVQT 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           +  RL+ +L  Y  +  R          +   L            T  ++        EP
Sbjct: 60  VSNRLKFRLNLYTLRENRDIKPKTFMSMVANLLYERRFGPYF---TEPVIAGLDPKTFEP 116

Query: 131 E-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
                            +  G+          +L       +++     +A+  A D   
Sbjct: 117 FICNLDLIGCPMITEDFVVAGTCTEQLYGMCESLWKPDLEPDDLFETISQALLNAVDRDA 176

Query: 175 YTNHNIVLETLKVG 188
            +   +++  ++  
Sbjct: 177 VSGWGVIVHVIEKD 190


>gi|322488248|emb|CBZ23493.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 247

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 66/202 (32%), Gaps = 23/202 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGS 64
              + +  T   +   G V++AGD ++  G   +    +  K+ +L     +A  G    
Sbjct: 35  SPYQDNGGTTAAIAGKGFVILAGDTRL-NGDYCLHCRHDQSKIFQLTPYTYMASNGMQAD 93

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-----MILIADKTITL 119
                 +L+   K  +      +  +  +A+      Y R         MI+  D+    
Sbjct: 94  RVQLQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMIVGLDEEGNG 153

Query: 120 V-ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---------TQNSAEE---IARKAM 166
           V  +               GS  S+       L++          + + EE   + + A 
Sbjct: 154 VCYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLINRQHMTAQAPPEMTKEETLAMLKNAF 213

Query: 167 SIAADICVYTNHNIVLETLKVG 188
           + AA+  +YT  ++    +   
Sbjct: 214 TGAAERDIYTGDSVSFFIITKD 235


>gi|190348459|gb|EDK40915.2| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 205

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     + IA D ++      +  N  KV ++GK   + G  G + 
Sbjct: 1   MSDPFSINGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWR--MDKYLRNLEAMILI------ADKTIT 118
           D  TL E    K   Y  +  R               Y R      +             
Sbjct: 60  DVITLREDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQP 119

Query: 119 LVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
            +        ++     +  G+          +L       E++     +A+  A D   
Sbjct: 120 FICGFDSIGCIDFAKDFIVSGTASDQLYGTCESLYEPNLEPEDLFETISQALLNAVDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +    V+  +   
Sbjct: 180 LSGWGAVVYVVTKE 193


>gi|145356837|ref|XP_001422631.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582874|gb|ABP00948.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 232

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 64/204 (31%), Gaps = 20/204 (9%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M           TTI+ VR    V++  D + S G  V    + K+ ++     +   +G
Sbjct: 1   MDHGFDVPVSMGTTIMAVRYADGVILGADSRTSTGTYVANRASDKITQICDNVWMC-RSG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSS--------------VELAKDWRMDKYLRNLEAM 109
           S+AD   +   + +  +++   +  ++                L K    +   R    M
Sbjct: 60  SAADTQNVAAYVSRLAQEHAVSVSSAAAGADEVLTCDVKLVANLTKTIAYENKDRLQAGM 119

Query: 110 ILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARK 164
           I+     K    V          E      GSG +Y             S EE       
Sbjct: 120 IIAGWDRKLGPQVYGIPLGGSMVEAPFTVGGSGSAYVYGWCDDTFKEDMSKEEAQAWVTN 179

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
           A+S+A      +   I L T+   
Sbjct: 180 AISLAIARDASSGGVIRLVTIDGK 203


>gi|225706352|gb|ACO09022.1| Proteasome subunit beta type 3 [Osmerus mordax]
          Length = 205

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V +A D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMRGKQCVAVAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYEKRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       +++     +AM  A D 
Sbjct: 118 EPFICSLDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPDDLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V+  ++  
Sbjct: 178 DAVSGMGVVVHVIEKD 193


>gi|18859271|ref|NP_571227.1| proteasome subunit beta type-6 [Danio rerio]
 gi|2654062|gb|AAB87681.1| proteasome subunit Y [Danio rerio]
          Length = 223

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 23  GTTIMAVEFDGGVVMGADSRTTTGAYIANRVTDKLTPIHDRIFCC-RSGSAADTQAIADA 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L  +  +L  + +                  ++               V T     
Sbjct: 82  VTYQLGFHSIELDEAPLVQTAASLFRDMCYRYREELMAGIIVAGWDRRRGGQVYTVPVGG 141

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +     V   GSG SY      +   +  S EE  +    A+++  +    +   + L  
Sbjct: 142 MLTRQPVSVGGSGSSYIYGYVDSNYRSGMSKEECLKFTAGALTLPMERDGSSGGVVRLAV 201

Query: 185 L 185
           +
Sbjct: 202 I 202


>gi|320590790|gb|EFX03233.1| proteasome component [Grosmannia clavigera kw1407]
          Length = 206

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 54/195 (27%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  KV + G    + G  G + 
Sbjct: 1   MSSPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKVFQYGDNVFL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTI 117
           D  T+ +    K+  Y  +  R  +    A       Y R             L      
Sbjct: 60  DVNTVSDLFRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLEPKTGQ 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       + +     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFARDFIVSGTASEQLFGMCESLWEPDLGPDALFETISQALLNAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGAHVYIIEKD 194


>gi|213409155|ref|XP_002175348.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
           yFS275]
 gi|212003395|gb|EEB09055.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
           yFS275]
          Length = 204

 Score = 90.4 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 55/192 (28%), Gaps = 13/192 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +  + + +     V IA D ++      +  N  K+  + +   + G  G + D 
Sbjct: 2   SIMEYNGGSCIAMVGKECVAIASDLRLGAQSVSLTNNFPKIFSMTEKTYL-GLTGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIAD---KTITLV 120
            TL E    K+  Y  +  R          +      K         ++A         +
Sbjct: 61  QTLHELFRYKINMYKLREERQIEPKTFANLVSSTLYEKRFAPYFTFPIVAGLSKTNEPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYT 176
                   ++        G+   +       L       E++     +A+  A D    +
Sbjct: 121 CGFDSIGCIDFAKDFAVSGTASDHLYGICEDLYEPDLEPEDLFETISQALLNAIDRDCIS 180

Query: 177 NHNIVLETLKVG 188
               V+  +   
Sbjct: 181 GWGCVVYVISKD 192


>gi|55859677|emb|CAI10874.1| proteasome (prosome, macropain) subunit, beta type, 7 [Homo
           sapiens]
          Length = 210

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 7/129 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVL 128
           +   LE +     R    +  +  + + L   +  I  A      D T   + +      
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGS 161

Query: 129 EPENGVMAI 137
             +   + +
Sbjct: 162 TDKLPYVTM 170


>gi|66827667|ref|XP_647188.1| proteasome subunit beta type 6 [Dictyostelium discoideum AX4]
 gi|74897489|sp|Q55GJ6|PSB6_DICDI RecName: Full=Proteasome subunit beta type-6; AltName:
           Full=Differentiation-associated proteasome subunit 1;
           Short=DAPS-1; Flags: Precursor
 gi|60475212|gb|EAL73147.1| proteasome subunit beta type 6 [Dictyostelium discoideum AX4]
          Length = 214

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  DG V++  D + + G  +      K+  + +       +GS+AD   + + 
Sbjct: 14  GTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCC-RSGSAADTQAISDY 72

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL-VITGMGDV 127
           +   LE + ++L                  + +  ++        DK     V       
Sbjct: 73  VRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGG 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      +    + + +E     + ++++A      +   I L  
Sbjct: 133 SMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCI 192

Query: 185 LKVG 188
           +   
Sbjct: 193 IDKN 196


>gi|145514243|ref|XP_001443032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410393|emb|CAK75635.1| unnamed protein product [Paramecium tetraurelia]
          Length = 204

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 69/204 (33%), Gaps = 22/204 (10%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                + +  +I+ ++    + +A D +     + +  N +KV ++    ++A  +G ++
Sbjct: 1   MSGIFEYNGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLA-LSGLNS 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWR--MDKYLRNLEAMILIA-----DKTITL 119
           D  T    +EK++  Y  +  R               Y R      +       +    +
Sbjct: 60  DIHTFYALMEKEINLYNLKENRKMKPTTFANLVASALYERRFGPFFVTPIVAGLENGKPI 119

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC-- 173
           + T          +     G+GG+Y   A  A      S EE+     +++    D    
Sbjct: 120 LATYDSIGCKSDLDDFQVGGTGGNYIYGACEAFFKPDLSPEELEEVIGQSLVSGCDRDSL 179

Query: 174 ------VY--TNHNIVLETLKVGD 189
                 VY  T   + ++ LK   
Sbjct: 180 SGWGGVVYVLTEQKLTVKILKTKQ 203


>gi|326435830|gb|EGD81400.1| proteasome subunit beta type-6 [Salpingoeca sp. ATCC 50818]
          Length = 220

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V     VVI  D + + G  V      K+ +L         +GS+AD   + + 
Sbjct: 20  GTTIMAVEFADGVVIGADSRTTTGAYVANRVTDKLTKLTDYIYCC-RSGSAADTQAIADI 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   LE +  ++                       L A I+ A         V +     
Sbjct: 79  VRYYLELHSVEIDEEPRVGVAASIFREFCYNNRDQLTAGIICAGFDEHKGGQVYSIPLGG 138

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           L         GSG ++      +      + +E     R A+++A      +   I    
Sbjct: 139 LVVRQPFAIGGSGSTFLYGHCDSTFKEGMAKDECLTFVRNALALAMSRDGSSGGVIRTAV 198

Query: 185 LKVG 188
           +   
Sbjct: 199 ITKD 202


>gi|295901495|dbj|BAJ07259.1| proteasome subunit, beta type 9-like [Oryzias latipes]
 gi|295901526|dbj|BAJ07280.1| proteasome subunit, beta type 9-like [Oryzias latipes]
          Length = 217

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 63/185 (34%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL    DG VVI  D + S+ G+ V      KV ++         AGS ADA  + +
Sbjct: 16  GTTILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCC-MAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + +L  +  Q+    + ++               L+A  + A         V      
Sbjct: 75  TAKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEELQAGFITAGWDKKKGPQVYVVSLG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +     V   GSG +Y      A      + EE    A  A+++A      +     L 
Sbjct: 135 GMLISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVANLV 194

Query: 184 TLKVG 188
            +   
Sbjct: 195 VITEE 199


>gi|146414175|ref|XP_001483058.1| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 205

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 53/194 (27%), Gaps = 13/194 (6%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     + IA D ++      +  N  KV ++GK   + G  G + 
Sbjct: 1   MSDPFSINGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWR--MDKYLRNLEAMILI------ADKTIT 118
           D  TL E    K   Y  +  R               Y R      +             
Sbjct: 60  DVITLREDFRLKNNLYKLREEREMEPKTLANLVSTSLYERRFGPYFVSPIVAGLGKGGQP 119

Query: 119 LVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
            +        ++     +  G+          +L       E++     +A+  A D   
Sbjct: 120 FICGFDLIGCIDFAKDFIVSGTASDQLYGTCESLYEPNLEPEDLFETISQALLNAVDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +    V+  +   
Sbjct: 180 LSGWGAVVYVVTKE 193


>gi|238881595|gb|EEQ45233.1| proteasome component C5 [Candida albicans WO-1]
          Length = 244

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 69/215 (32%), Gaps = 29/215 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD +   G ++      K+  +G   I+   
Sbjct: 19  VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDD-ILMTA 77

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADK 115
            G +AD   L++R ++ L  Y           +S+    +     K      + ++    
Sbjct: 78  NGFAADGVALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFPYVSTLIAGLD 137

Query: 116 TITL--VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----------------N 156
                 V +             A G+  S  +      ++ +                  
Sbjct: 138 EEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQFVPGTDGKEKKPLKFL 197

Query: 157 SAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           + EE   + R A + A +  +Y    + ++ +   
Sbjct: 198 TLEEVIQLVRDAFTSAGERHIYVGDGLEIKIVTKD 232


>gi|159119270|ref|XP_001709853.1| Proteasome subunit beta type 7 precursor [Giardia lamblia ATCC
           50803]
 gi|157437971|gb|EDO82179.1| Proteasome subunit beta type 7 precursor [Giardia lamblia ATCC
           50803]
          Length = 273

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 73/194 (37%), Gaps = 10/194 (5%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           + +   + K   TTI+ +   G V++A D + + G  VM  N +K+  + +   +A  AG
Sbjct: 56  LAECSKSFKKTGTTIMGLTFKGGVILAADTRSTGGPVVMNKNKKKLVCINEQMYMA-GAG 114

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTI 117
           ++AD   +       L  +  +  R  +  +        + +Y+  + A ++IA  D   
Sbjct: 115 TAADTAAVGRMAASSLRLHAYKTGRKPLVQSAVKLISDHLFRYMGYVSAYVIIAGVDYKG 174

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICV 174
             + +            +  GSG   A S              A E A KA+       +
Sbjct: 175 AHLCSIDAHGSITAQPFVTDGSGRLAAQSMLEKHWKPDMEENDAVECACKAVEAGVFNDL 234

Query: 175 YTNHNIVLETLKVG 188
            +   + L  L++ 
Sbjct: 235 GSGSGVDLVILRLD 248


>gi|130856|sp|P28076|PSB9_MOUSE RecName: Full=Proteasome subunit beta type-9; AltName: Full=LMP-2d;
           AltName: Full=Low molecular mass protein 2; AltName:
           Full=Macropain chain 7; AltName: Full=Multicatalytic
           endopeptidase complex chain 7; AltName: Full=Proteasome
           chain 7; AltName: Full=Proteasome subunit beta-1i;
           AltName: Full=Really interesting new gene 12 protein;
           Flags: Precursor
 gi|237568|gb|AAB20105.1| low molecular mass polypeptide complex subunit 2 [Mus sp.]
 gi|984349|gb|AAA75304.1| 20S proteasome subunit Lmp2 [Mus musculus]
 gi|984351|gb|AAA75305.1| 20S proteasome subunit Lmp2 [Mus musculus]
 gi|1209537|gb|AAA98932.1| low molecular weight protein 2 Lmp2 [Mus musculus]
 gi|2467355|dbj|BAA22579.1| low molecular mass polypeptide complex subunit 2 [Mus musculus]
 gi|2467359|dbj|BAA22581.1| low molecular mass polypeptide complex subunit 2 [Mus spretus]
 gi|2467363|dbj|BAA22583.1| low molecular mass polypeptide complex subunit 2 [Mus spretus]
 gi|71059783|emb|CAJ18435.1| LMP-2 [Mus musculus]
 gi|109732865|gb|AAI16365.1| Psmb9 protein [Mus musculus]
 gi|228222|prf||1718343A LMP-2 gene
          Length = 219

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 68/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L    I    +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPL-HQRIFCALSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +          +L        D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|109114735|ref|XP_001084269.1| PREDICTED: proteasome subunit beta type-3 isoform 2 [Macaca
           mulatta]
 gi|332258335|ref|XP_003278254.1| PREDICTED: proteasome subunit beta type-3-like isoform 1 [Nomascus
           leucogenys]
 gi|332258337|ref|XP_003278255.1| PREDICTED: proteasome subunit beta type-3-like isoform 2 [Nomascus
           leucogenys]
          Length = 205

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + +  +   +K         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHIIEKD 193


>gi|226489268|emb|CAX75778.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
          Length = 212

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 20/201 (9%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSS 65
                  +  T++ +  +   +IA D ++  G  V+   N  ++ +LG+GN++ G AG  
Sbjct: 1   MFNLYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVL-GCAGFH 59

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM--DKYLRNLEAMILIA-----DKTIT 118
            D  TL + LE K++ Y     +     A    +    Y R      +       D    
Sbjct: 60  GDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGDRG 119

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAAR-------ALMS----TQNSAEEIARKAMS 167
           ++ +          G  A GS  +              +        + +A ++      
Sbjct: 120 VLYSYDPVGSYEAEGYRASGSSAAILQPFLDSTVGNKTSKYHVSRLNKETAVKLTHDIFI 179

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+        +V+ T+   
Sbjct: 180 SAAERDTQCGDGVVIYTVTKD 200


>gi|17380242|sp|O35524|PSB9_MUSSI RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
           molecular mass protein 2; AltName: Full=Macropain chain
           7; AltName: Full=Multicatalytic endopeptidase complex
           chain 7; AltName: Full=Proteasome chain 7; AltName:
           Full=Proteasome subunit beta-1i; AltName: Full=Really
           interesting new gene 12 protein; Flags: Precursor
 gi|2467365|dbj|BAA22584.1| low molecular mass polypeptide complex subunit 2 [Mus spicilegus]
          Length = 219

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 68/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L    I    +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPL-HQRIFCALSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +          +L        D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|17380240|sp|O35522|PSB9_MUSMB RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
           molecular mass protein 2; AltName: Full=Macropain chain
           7; AltName: Full=Multicatalytic endopeptidase complex
           chain 7; AltName: Full=Proteasome chain 7; AltName:
           Full=Proteasome subunit beta-1i; AltName: Full=Really
           interesting new gene 12 protein; Flags: Precursor
 gi|2467351|dbj|BAA22577.1| low molecular mass polypeptide complex subunit 2 [Mus musculus
           bactrianus]
          Length = 219

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 68/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L    I    +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPL-HQRIFCALSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +          +L        D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|50556674|ref|XP_505745.1| YALI0F22341p [Yarrowia lipolytica]
 gi|49651615|emb|CAG78556.1| YALI0F22341p [Yarrowia lipolytica]
          Length = 206

 Score = 90.0 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 49/180 (27%), Gaps = 14/180 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                +++  + + +     V IA D ++      +  +  KV   G    + G  G + 
Sbjct: 1   MSNPQEINGGSCVAMVGKDCVAIACDLRMGSQGLGVSNDFEKVFNYGDNVYL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  TL E   +K   Y     R                  R   Y        + +    
Sbjct: 60  DVQTLHEVFREKTNLYKMAEERQIEPETFANLVSSTLYEKRFGPYFVGPIVAGINSKTEK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
             +        ++     +  G+          +L       E++     +A+  A D  
Sbjct: 120 PFICGFDLIGCIDFAKDFIVSGTASDMLYGMCESLWQPDLEPEDLFNTCSQALMCAMDRD 179


>gi|68489003|ref|XP_711658.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
 gi|46432977|gb|EAK92436.1| hypothetical protein CaO19.8916 [Candida albicans SC5314]
          Length = 206

 Score = 90.0 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 60/207 (28%), Gaps = 24/207 (11%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +   G + I  D ++      +  N  K+  +G    + G  G + 
Sbjct: 1   MSDPFSINGGAAVAMIGKGCIAIGSDLRLGQQSLGVSNNFEKIFSVGDKTFL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS--VELAKDWRMDKYLRNLEAMI-------LIADKTI 117
           D  +L E    K   Y  +  R+     LA       Y R             L +    
Sbjct: 60  DVISLKELFRFKTNLYKLREERNIEPSTLANLVSSSLYERRFGPWFVSPIVAGLSSKDNK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++  +  +  G+          +L       E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRD 179

Query: 174 --------VY--TNHNIVLETLKVGDE 190
                   VY  T   ++   LK   +
Sbjct: 180 ALSGWGAVVYIVTKDKVIKRVLKTRQD 206


>gi|67481017|ref|XP_655858.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56473029|gb|EAL50477.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 205

 Score = 90.0 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 61/197 (30%), Gaps = 14/197 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           MGD           ++ +   G V IA D +  L      AN  KV ++ K   + G AG
Sbjct: 1   MGD--DISYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKY-CLFGGAG 57

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DK 115
             +D  T+ E+++     Y  +                 L                  D 
Sbjct: 58  LFSDVQTMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDN 117

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
             + V +         + V  +G+G +  +    +        EE+     + +  A + 
Sbjct: 118 GNSYVCSYDYIGSPEISQVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENR 177

Query: 173 CVYTNHNIVLETLKVGD 189
             ++   + +  L   +
Sbjct: 178 DAFSGWGVEVYLLTRDN 194


>gi|3980264|emb|CAA09603.1| 20S proteasome beta subunit [Cicer arietinum]
          Length = 238

 Score = 90.0 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 41/170 (24%), Gaps = 45/170 (26%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V++A D                                         
Sbjct: 54  KGTTTLAFIFKEGVMVAAD-----------------------------------CQFWHR 78

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L         D+T   +     +
Sbjct: 79  NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSE 138

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
               +    ++GSG  YA     +      S   A E+AR+A+  A    
Sbjct: 139 GGRLKGTRFSVGSGSPYAYGVLDSGYKYDMSIEEASELARRAIYHATFRD 188


>gi|198460983|ref|XP_001361869.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
 gi|198137197|gb|EAL26448.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
          Length = 225

 Score = 90.0 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 62/195 (31%), Gaps = 12/195 (6%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M      V    TTI+ V  DG VVI  D + S G  V      K+ R+    I    +G
Sbjct: 5   MDFTDTPVST-GTTIMAVEFDGGVVIGADSRTSSGPYVANRVTDKLTRITD-KIYCCRSG 62

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---- 119
           S+AD   + + +   L  + NQ  + ++          Y  N    +L            
Sbjct: 63  SAADTQAIADIVAYSLNYHENQTSKDALVFEAASEFRNYCYNYRDSLLAGIIVAGWDEQR 122

Query: 120 ---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
              V +     +         GSG S+     R       S EE     + A+  A    
Sbjct: 123 GGQVFSIPLGGMLTREPCTIGGSGSSFIYGYVREHFHEGMSKEECVKFVKTAVQHAIYHD 182

Query: 174 VYTNHNIVLETLKVG 188
             +   + +  +   
Sbjct: 183 GSSGGVVRVGIITKE 197


>gi|159113877|ref|XP_001707164.1| Proteasome subunit beta type 9 precursor [Giardia lamblia ATCC
           50803]
 gi|157435267|gb|EDO79490.1| Proteasome subunit beta type 9 precursor [Giardia lamblia ATCC
           50803]
          Length = 221

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 13/177 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSA--DAFT 70
            TTI+ ++    V+++ D + ++G  V+     KV  +       IAG    +       
Sbjct: 25  GTTIIVMKYSNGVLLSADTRATMGNLVVDRFIPKVLPITDKIYTCIAGSVSHAQFLVNEV 84

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGM 124
               + ++++ + N      +       +  YL            +   D T    I  M
Sbjct: 85  RAHLMTQQMDLHANLNGMDPMVATAANIISIYLHKYREFLHAAFILGGVDNTGFHCINSM 144

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
                 E      GSGG +     + L   + +   A  +A K +  A  +   +  
Sbjct: 145 IGGSVLEEDYAISGSGGVFIKGLMKELYRPELTRTEAINLAHKLLKTAISLDTKSGG 201


>gi|164429302|ref|XP_958142.2| proteasome component PRE3 precursor [Neurospora crassa OR74A]
 gi|157073426|gb|EAA28906.2| proteasome component PRE3 precursor [Neurospora crassa OR74A]
          Length = 229

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 29  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           ++ +L  Y     R                     L A ++IA         V       
Sbjct: 88  VQYQLGLYHMVNGRPPTTQIAAAVFQEIAYANKDRLTAGLIIAGWDARHGGQVYNIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A          A    ++A+  A      +   I +  
Sbjct: 148 SLHKQPYSIGGSGSTYIYGYCDANWKEGMEEAEAVAFVKEALKEAIKWDGSSGGVIRMVV 207

Query: 185 LKVG 188
           L   
Sbjct: 208 LTEK 211


>gi|195170326|ref|XP_002025964.1| GL10209 [Drosophila persimilis]
 gi|194110828|gb|EDW32871.1| GL10209 [Drosophila persimilis]
          Length = 225

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 62/195 (31%), Gaps = 12/195 (6%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M      V    TTI+ V  DG VVI  D + S G  V      K+ R+    I    +G
Sbjct: 5   MDFTDTPVST-GTTIMAVEFDGGVVIGADSRTSSGPYVANRVTDKLTRITD-KIYCCRSG 62

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---- 119
           S+AD   + + +   L  + NQ  + ++          Y  N    +L            
Sbjct: 63  SAADTQAIADIVAYSLNYHENQTSKDALVFEAASEFRNYCYNYRDSLLAGIIVAGWDEQR 122

Query: 120 ---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
              V +     +         GSG S+     R       S EE     + A+  A    
Sbjct: 123 GGQVFSIPLGGMLTREPCTIGGSGSSFIYGYVREHFHEGMSKEECVKFVKTAVQHAIYHD 182

Query: 174 VYTNHNIVLETLKVG 188
             +   + +  +   
Sbjct: 183 GSSGGVVRVGIITKE 197


>gi|321464090|gb|EFX75100.1| hypothetical protein DAPPUDRAFT_306867 [Daphnia pulex]
          Length = 225

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  +G VVI  D + S G  V      K+ ++         +GS+AD   + + 
Sbjct: 25  GTSIMAVEFNGGVVIGADSRTSTGAYVANRVTDKLTKITNHIYCC-RSGSAADTQAIADI 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           +   LE +  QL  + +              Y   L A I+ A         V       
Sbjct: 84  VNYHLEFHEVQLGEAPLVKTAASVFQELCYNYRDQLTAGIICAGWDRRHGGQVFNIPLGG 143

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
           +         GSG +Y      +            +   K +++A      +   + L  
Sbjct: 144 MCVRQSFAIGGSGSTYVFGFVDSNFKKGMIKDECVQFVLKTLALAMSRDGSSGGVVRLGI 203

Query: 185 LKVG 188
           +   
Sbjct: 204 ITED 207


>gi|308810972|ref|XP_003082794.1| putative beta 1 subunit of 20S proteasome (ISS) [Ostreococcus
           tauri]
 gi|116054672|emb|CAL56749.1| putative beta 1 subunit of 20S proteasome (ISS) [Ostreococcus
           tauri]
          Length = 265

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 20/191 (10%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ V+    VV+  D + S G  V    + K+  + +   +   +GS+AD   +   +
Sbjct: 50  TTIMAVKYADGVVLGADSRTSTGTYVANRASDKITPICENVWMC-RSGSAADTQNVAAYV 108

Query: 76  EKKLEQY---------PNQLLRSSVELAKDWRMDKYLR----NLEAMILIADKTI---TL 119
            +  +++                           K        L+A ++IA         
Sbjct: 109 SRLAQEHAVSVSSAGADADEGIKCDVKLVANITQKIAYQNKDRLQAGMIIAGYDRKLGPQ 168

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYT 176
           V          EN     GSG +Y             S EE     ++A+S+A      +
Sbjct: 169 VYGIPLGGAMMENPFTVGGSGSAYIYGWCDDTFRENMSKEEAQAWVKRAISLAIARDASS 228

Query: 177 NHNIVLETLKV 187
              I L T+  
Sbjct: 229 GGVIRLVTIDA 239


>gi|77736139|ref|NP_001029768.1| proteasome subunit beta type-3 [Bos taurus]
 gi|108935878|sp|P33672|PSB3_BOVIN RecName: Full=Proteasome subunit beta type-3; AltName:
           Full=Proteasome chain 13; AltName: Full=Proteasome
           component C10-II; AltName: Full=Proteasome theta chain
 gi|74354224|gb|AAI02555.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
 gi|154426162|gb|AAI51436.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
 gi|296476492|gb|DAA18607.1| proteasome subunit beta type-3 [Bos taurus]
          Length = 205

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + +  +   +K         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCTEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHIIEKD 193


>gi|71028614|ref|XP_763950.1| proteasome beat subunit [Theileria parva strain Muguga]
 gi|68350904|gb|EAN31667.1| proteasome beat subunit, putative [Theileria parva]
          Length = 218

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 20/193 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           ++      +  T++    +   VIA D ++S    +    + K+ +L    I+ G +G  
Sbjct: 6   ERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCIL-GTSGMQ 64

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTIT 118
           AD   L   LE+++E Y     R     A    +   L                 D+   
Sbjct: 65  ADMLALQSVLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGK 124

Query: 119 LVITGMGDVL-EPENGVMAIGSGGSYALSAARALMSTQN-----------SAEEIARKAM 166
            V+ G   V         A G+  S  +S    L++  N               + + AM
Sbjct: 125 GVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAM 184

Query: 167 SIAADICVYTNHN 179
             A +  + T  +
Sbjct: 185 VSAVERDICTGDS 197


>gi|291405921|ref|XP_002719377.1| PREDICTED: proteasome beta 3 subunit [Oryctolagus cuniculus]
          Length = 205

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + +  +   +K         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTYKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHIIEKD 193


>gi|984938|gb|AAA75375.1| delta proteasome subunit [Mus musculus]
          Length = 202

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 59/178 (33%), Gaps = 11/178 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+ +G VV+  D + + G  +      K+  +         +GS+AD   + + +  +
Sbjct: 1   MAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADAVTYQ 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPE 131
           L  +  +L    +         +        ++          +    V +     +   
Sbjct: 60  LGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLK 186
                 GSG SY      A      + +E  +    A+++A +    +   I L  ++
Sbjct: 120 QSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQ 177


>gi|255714573|ref|XP_002553568.1| KLTH0E01826p [Lachancea thermotolerans]
 gi|238934950|emb|CAR23131.1| KLTH0E01826p [Lachancea thermotolerans]
          Length = 242

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 62/212 (29%), Gaps = 30/212 (14%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  TIL +  +   V+AGD + +   ++      KV   G   I+    G +
Sbjct: 20  HQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDN-ILISANGFA 78

Query: 66  ADAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
           AD   L++R +  L+ Y           RS+    +     K         +IA      
Sbjct: 79  ADGNALVKRFQNSLKWYHFDHNDKKLSMRSAARNIQHLLYGKRFFPYYVHTIIAGLDEEG 138

Query: 120 ---VITGMGDVLEPENGVMAIGSGGSYALSAAR------ALMSTQ-----------NSAE 159
              V +             A G+  S  +                            + E
Sbjct: 139 KGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPDSHGTKRKHVKFLTVE 198

Query: 160 E---IARKAMSIAADICVYTNHNIVLETLKVG 188
           E   + R A S A +  ++    + +  +   
Sbjct: 199 EVVQLVRDAFSSATERHIHVGDGVEILIVTKE 230


>gi|194756194|ref|XP_001960364.1| GF13326 [Drosophila ananassae]
 gi|190621662|gb|EDV37186.1| GF13326 [Drosophila ananassae]
          Length = 229

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ R+    I    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITD-KIYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y NQ  + ++          +  N    +L               V +     
Sbjct: 74  VAYSLNYYENQTNKDALVHEAASEFRNFCYNYRDSLLAGIIVAGYDEERGGQVYSIPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R       S EE     +KA+  A      +   + +  
Sbjct: 134 MLTREACTIGGSGSSFIYGFVREHYRQNMSKEECVDFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKD 197


>gi|17380239|sp|O35521|PSB9_MUSDU RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
           molecular mass protein 2; AltName: Full=Macropain chain
           7; AltName: Full=Multicatalytic endopeptidase complex
           chain 7; AltName: Full=Proteasome chain 7; AltName:
           Full=Proteasome subunit beta-1i; AltName: Full=Really
           interesting new gene 12 protein; Flags: Precursor
 gi|2467349|dbj|BAA22576.1| low molecular mass polypeptide complex subunit 2 [Mus terricolor]
          Length = 219

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 68/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L    I    +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPL-HQRIFCALSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +          +L        D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      + EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|286248|dbj|BAA01586.1| proteasome subunit R-DELTA [Rattus sp.]
          Length = 202

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 59/178 (33%), Gaps = 11/178 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+ DG VV+  D + + G  +      K+  +         +GS+AD   + + +  +
Sbjct: 1   MAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADAVTYQ 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPE 131
           L  +  +L    +         +        ++          +    V +     +   
Sbjct: 60  LGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLK 186
                 GSG SY      A      + +E  +    A+++A +    +   I L  ++
Sbjct: 120 QSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQ 177


>gi|149237248|ref|XP_001524501.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452036|gb|EDK46292.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 243

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 67/215 (31%), Gaps = 29/215 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD +   G ++      +V  +G   I+   
Sbjct: 18  VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPRVHNVGDN-ILMTA 76

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLR------SSVELAKDWRMDKYLRNLEAMILIADK 115
            G +AD   L++R ++  + Y            S+    +     K      + ++    
Sbjct: 77  NGFAADGVALIDRFKQSFKWYKFDNENRKLEISSAARYIQHLLYGKRFFPYVSTLIAGLD 136

Query: 116 TITL--VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----------------N 156
                 V +             A G+  S  +      ++ +                  
Sbjct: 137 EEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGTDGKEKKPLKYL 196

Query: 157 SAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           S EE   + R A + A +  +Y    + +  +   
Sbjct: 197 SLEEVIQLVRDAFTSAGERHIYVGDGLEIMIVTKD 231


>gi|242808757|ref|XP_002485230.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218715855|gb|EED15277.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 206

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 21/195 (10%), Positives = 50/195 (25%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  K+        + G  G + 
Sbjct: 1   MSSPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWR--MDKYLRNLEAMI-------LIADKTI 117
           D  T+ +    K+  Y  +  R               Y R             +      
Sbjct: 60  DVTTVSDLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+           L       E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGANVYIIEKD 194


>gi|6322459|ref|NP_012533.1| Pre3p [Saccharomyces cerevisiae S288c]
 gi|1172606|sp|P38624|PSB6_YEAST RecName: Full=Proteasome component PRE3; AltName: Full=Macropain
           subunit PRE3; AltName: Full=Multicatalytic endopeptidase
           complex subunit PRE3; AltName: Full=Proteinase YSCE
           subunit PRE3; Flags: Precursor
 gi|323462949|pdb|3NZJ|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462963|pdb|3NZJ|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462977|pdb|3NZW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462991|pdb|3NZW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323463005|pdb|3NZX|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463019|pdb|3NZX|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|2131077|emb|CAA89290.1| PRE3 [Saccharomyces cerevisiae]
 gi|151945075|gb|EDN63326.1| 20S proteasome subunit [Saccharomyces cerevisiae YJM789]
 gi|190409486|gb|EDV12751.1| 20S proteasome subunit [Saccharomyces cerevisiae RM11-1a]
 gi|285812892|tpg|DAA08790.1| TPA: Pre3p [Saccharomyces cerevisiae S288c]
 gi|290771204|emb|CBK33732.1| Pre3p [Saccharomyces cerevisiae EC1118]
          Length = 215

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 65/182 (35%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAIADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMGDVL 128
           ++  LE Y +Q    S E A         +   NL A I++A   DK    V T      
Sbjct: 78  VQYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGS 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETL 185
             +      GSG ++             S EE     + ++S A      +   I +  L
Sbjct: 138 VHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVL 197

Query: 186 KV 187
             
Sbjct: 198 TA 199


>gi|254578212|ref|XP_002495092.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
 gi|238937982|emb|CAR26159.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
          Length = 205

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 55/195 (28%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  K+ + G   +  G  G + 
Sbjct: 1   MSDPSTINGGVCVAMTGKDCVAIACDLRLGMQSLGVSNNFEKIFKYGH--VFLGLTGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVE--LAKDWRMDKYLRNLEAMI-------LIADKTI 117
           D  TL E    K   Y  +  R        +      Y R             + +    
Sbjct: 59  DVTTLSETFRYKTNLYNLKEDRPIEPETFTQLVSSSLYERRFGPFFVGPIVAGINSKTGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       E++     +++  A D  
Sbjct: 119 PFIAGFDMIGCIDEAKDFIVSGTASDQLFGMCESLYEPDLEPEDLFETISQSLLNAVDRD 178

Query: 174 VYTNHNIVLETLKVG 188
             +    V+  ++  
Sbjct: 179 ALSGWGAVVYIIQKD 193


>gi|198463833|ref|XP_002135596.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
 gi|198151431|gb|EDY74223.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
          Length = 216

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 64/196 (32%), Gaps = 17/196 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + +  T+L +     VVI GD ++S G  ++     K+  L K  ++A   G   DA
Sbjct: 8   DLYENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAA-TGCGCDA 66

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            +L   L+ K + Y NQ  +     +    +         +       +  +       +
Sbjct: 67  VSLTNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAV 126

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS----------------AEEIARKAMSIAADI 172
              + +       S     A  ++                     A  IA+ A   AA  
Sbjct: 127 FSYDCIGHFVRESSRVEGTAVGILQPVLDNQIGETSEQPALTKERALAIAKDAFITAAQS 186

Query: 173 CVYTNHNIVLETLKVG 188
            ++T  ++++  +   
Sbjct: 187 DMFTGDSVIINVITKD 202


>gi|45184652|ref|NP_982370.1| AAL172Cp [Ashbya gossypii ATCC 10895]
 gi|44979998|gb|AAS50194.1| AAL172Cp [Ashbya gossypii ATCC 10895]
          Length = 215

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 7/152 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V+    V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 19  GTSIMAVKFRDGVILGADSRTTTGTYIANRVTDKLTRVHDRIWCC-RSGSAADTQAVADM 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMGDVL 128
           ++  LE Y  Q    S   A         +   +L A I++A   DK    V +      
Sbjct: 78  VQHYLELYTMQYGEPSASTAASLFSTICYENKDHLTAGIIVAGYDDKNKGEVYSIPLGGS 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +      GSG ++             S EE
Sbjct: 138 VHKAPYAIAGSGSTFIYGYCDKHFREDMSKEE 169


>gi|167393450|ref|XP_001740580.1| proteasome subunit beta type-3 [Entamoeba dispar SAW760]
 gi|165895272|gb|EDR23004.1| proteasome subunit beta type-3, putative [Entamoeba dispar SAW760]
          Length = 205

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 61/197 (30%), Gaps = 14/197 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           MGD           ++ +   G V IA D +  L      AN  KV ++ K  +  G AG
Sbjct: 1   MGD--DITYYSGGAVVGMAGKGCVAIAADNRYGLKYQFASANFHKVFQVNKYCLFGG-AG 57

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DK 115
             +D  T+ E+++     Y  +                 L                  D 
Sbjct: 58  LFSDVQTMAEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDN 117

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
             + V +         + V  +G+G +  +    +        EE+     + +  A + 
Sbjct: 118 GNSYVCSYDYIGSPEISRVGCVGTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENR 177

Query: 173 CVYTNHNIVLETLKVGD 189
             ++   + +  L   +
Sbjct: 178 DAFSGWGVEVYLLTRDN 194


>gi|284165546|ref|YP_003403825.1| proteasome endopeptidase complex subunit beta [Haloterrigena
           turkmenica DSM 5511]
 gi|302595714|sp|D2RUI0|PSB2_HALTV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
           proteasome beta subunit 2; AltName: Full=Proteasome core
           protein PsmB 2; Flags: Precursor
 gi|284015201|gb|ADB61152.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
           turkmenica DSM 5511]
          Length = 237

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 10/174 (5%)

Query: 24  DGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQY 82
           D  VVIA D + SLG   V   N +KV ++     +    GS   A + +  L  ++  Y
Sbjct: 51  DEGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGAL-TLVGSVGGAQSFIRTLRAEVNLY 109

Query: 83  PNQLLRSSVELAKDWRMDKY-----LRNLEAMILIADKTITLVITGMGDVLEPENGVMAI 137
            ++        A       +      R +  ++   D+  + V +         +     
Sbjct: 110 ESRRGEPMPIEALATLAGNFARGGPFRAINPILGGVDEEGSHVYSIDPAGGVMADDYTVT 169

Query: 138 GSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           GSG   A            S EE   +A +A+  A +    + + + L  +   
Sbjct: 170 GSGMQLAYGLLEQEYEEGLSLEEAQSVAARAIESAVERDTGSGNGVFLAAVTGE 223


>gi|89272044|emb|CAJ83196.1| proteasome (prosome macropain) subunit beta type 3 [Xenopus
           (Silurana) tropicalis]
          Length = 194

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 16/184 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +R    V IA D +  +   ++  + +K+  +G    I G AG + D  T+ +RL+ +
Sbjct: 1   MAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYI-GLAGLATDVQTVSQRLKFR 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITLVITGM--GDV 127
           L  Y  +  R          +   L          +              + +    G  
Sbjct: 60  LNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIGCP 119

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +E E+  +  G+          +L       E++     +AM  A D    +   +V+  
Sbjct: 120 METED-FVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMGVVVHV 178

Query: 185 LKVG 188
           ++  
Sbjct: 179 IEKD 182


>gi|115749228|ref|XP_792356.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 177

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 11/150 (7%)

Query: 43  KANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKY 102
             + +KV  +    ++   AG +AD       L ++   Y  +        A    +   
Sbjct: 1   SQSVKKVIEINPY-LLGTMAGGAADCAFWERVLAEQCRIYELRNKERISVAAASKLLANM 59

Query: 103 LRNLEAMILI-------ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
           L N + M L         DK    +     D     N + ++GSG  YA          +
Sbjct: 60  LYNYKGMGLSVGTMICGWDKRGPGLYYVDSDGNRLTNNIFSVGSGSPYAYGVLDEGYKWE 119

Query: 156 NS---AEEIARKAMSIAADICVYTNHNIVL 182
            S   A ++ ++A+  A     Y+   + L
Sbjct: 120 LSVEDALDLGQRAIYHATHRDAYSGGVVNL 149


>gi|255720859|ref|XP_002545364.1| proteasome component C5 [Candida tropicalis MYA-3404]
 gi|240135853|gb|EER35406.1| proteasome component C5 [Candida tropicalis MYA-3404]
          Length = 245

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 69/216 (31%), Gaps = 30/216 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD +   G ++      KV  +G   I+   
Sbjct: 19  VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVTGYSIQSRYEPKVHDVGDD-ILMTA 77

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADK 115
            G +AD   L++R ++ L  Y           +S+    +     K         LIA  
Sbjct: 78  NGFAADGVALIDRFKQSLIWYKFDNGGKKLTIKSAARYIQHLLYGKRFFPFYVSTLIAGL 137

Query: 116 TITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----------------- 155
                  V +             A G+  S  +      ++ +                 
Sbjct: 138 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQFVPGTDGKEKKPLKY 197

Query: 156 NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
            S EE   + R A + A +  +Y    + ++ +   
Sbjct: 198 LSLEEVIQLVRDAFTSAGERHIYVGDGLEIKIVTKD 233


>gi|158300062|ref|XP_320065.4| AGAP009271-PA [Anopheles gambiae str. PEST]
 gi|157013820|gb|EAA14913.4| AGAP009271-PA [Anopheles gambiae str. PEST]
          Length = 229

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 61/190 (32%), Gaps = 21/190 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ +L    I    +GS+AD   + + 
Sbjct: 17  GTTIMAVEFDGGVVIGADSRTSTGTYVANRVTDKLTKLTD-KIYCCRSGSAADTQAIADI 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-------DV 127
           +   L  + NQ     +         +Y  N    ++             G         
Sbjct: 76  VAYSLNYHENQTGEPPLVEDAANEFRQYCYNYRDTLVAGIIVAGWDAKHGGQVYSVPVGG 135

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA-------ADIC---V 174
           ++    V   GSG SY     +             E  +K++  A         +C   V
Sbjct: 136 MQIRQSVTIGGSGSSYIYGFVKENYREGMPRDECVEFVKKSIFHAMYHDGSSGGVCRIGV 195

Query: 175 YTNHNIVLET 184
            T   +  E 
Sbjct: 196 ITKDGVEREV 205


>gi|39967987|ref|XP_365384.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145012965|gb|EDJ97606.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 211

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 12  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVSDTIWCC-RSGSAADTQAVADI 70

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDV 127
           ++ +L  +     +                     L A ++IA         V +     
Sbjct: 71  VQYQLGLFHMTNGKPPTTQTAAAIFQEICYSNKDRLSAGLIIAGWDERHGGQVYSIPLGG 130

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A          A +  + A++ A      +   I +  
Sbjct: 131 SLHKQAYAIGGSGSTYIYGYCDANWREGMEEADAVQFVKGALAEAIKWDGSSGGVIRMVV 190

Query: 185 LKVG 188
           L   
Sbjct: 191 LTAK 194


>gi|227937351|gb|ACP43316.1| 20S proteasome beta subunit 5 [Citrus maxima]
          Length = 194

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 11/149 (7%)

Query: 40  TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM 99
            +   + +K+  +    ++   AG +AD       L  K   +     R          +
Sbjct: 2   YISSQSVKKIIEINPY-MLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 60

Query: 100 DKYLRNLEAMILI-------ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM 152
              L +   M L         D+T   +     +    +    ++GSG  YA     +  
Sbjct: 61  ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGY 120

Query: 153 STQNS---AEEIARKAMSIAADICVYTNH 178
               S   A E+AR+A+  A      +  
Sbjct: 121 KFDMSIEEAAELARRAIYHATFRDAASGG 149


>gi|194466260|gb|ACF74359.1| threonine endopeptidase [Arachis hypogaea]
          Length = 161

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 8/153 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD+  + + 
Sbjct: 10  GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVC-RSGSAADSQVVSDY 68

Query: 75  LEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +   L Q+  QL + +                   LE  +++          +       
Sbjct: 69  VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEGGQIYGVPLGG 128

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +      GSG SY           + + +E
Sbjct: 129 TIVQQPFAIGGSGSSYLYGFFDQAWKGRMTKDE 161


>gi|8919092|emb|CAB96046.1| proteasome beta 2 subunit [Giardia intestinalis]
          Length = 238

 Score = 89.3 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 73/194 (37%), Gaps = 10/194 (5%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           + +   + K   TTI+ +   G V++A D + + G  VM  N +K+  + +   +A  AG
Sbjct: 21  LAECSKSFKKTGTTIMGLTFKGGVILAADTRSTGGPVVMNKNKKKLVCINEQMYMA-GAG 79

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTI 117
           ++AD   +       L  +  +  R  +  +        + +Y+  + A ++IA  D   
Sbjct: 80  TAADTAAVGRMAASSLRLHAYKTGRKPLVQSAVKLISDHLFRYMGYVSAYVIIAGVDYKG 139

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICV 174
             + +            +  GSG   A S              A E A KA+       +
Sbjct: 140 AHLCSIDAHGSITAQPFVTDGSGRLAAQSMLEKHWKPDMEENDAVECACKAVEAGVFNDL 199

Query: 175 YTNHNIVLETLKVG 188
            +   + L  L++ 
Sbjct: 200 GSGSGVDLVILRLD 213


>gi|313231365|emb|CBY08480.1| unnamed protein product [Oikopleura dioica]
          Length = 242

 Score = 89.3 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 21/199 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                H  T L +  D  V++A D ++     +      +   +     I G  G   DA
Sbjct: 32  SPYSWHGGTCLAIAGDDFVLMASDTRLGEHGGIYTRELNRNSPVTDHCAI-GQCGFQGDA 90

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
             LL+ ++ K+  Y +Q +      A    +   L             +  +        
Sbjct: 91  RVLLQNVKAKIRIYEHQHMEQPTAPAIAAMLSTMLYYKRFFPYYVYNIVAGLDGDGKGSV 150

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---------TQNSAE---EIARKAMSI 168
            +        +  ++  GS  +         +           + + E   ++A  A   
Sbjct: 151 FSYDPVGSYDQVPMVCYGSAQNLIQPFLDNQIRRPHIKEDAAPKMTRERVRQLAIDAFIS 210

Query: 169 AADICVYTNHNIVLETLKV 187
           A++    T   I +  +  
Sbjct: 211 ASERETNTGDGITVTLIDK 229


>gi|189205423|ref|XP_001939046.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187975139|gb|EDU41765.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 205

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 54/195 (27%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  K+ + G   +  G  G + 
Sbjct: 1   MSSPFSINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD--VFLGLTGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  T+ +    K+  Y  +  R+                 R   Y  +     +      
Sbjct: 59  DVSTVSDLFRYKVNMYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+           L       E++     +A+  A D  
Sbjct: 119 PFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRD 178

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 179 ALSGWGAHVYIIEKD 193


>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
 gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
          Length = 217

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 73/199 (36%), Gaps = 20/199 (10%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                 +  T++    +   VIA D ++S+G  +   N  K+++L +  +I G +G  AD
Sbjct: 7   FNPYVNNGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVI-GTSGMQAD 65

Query: 68  AFTLLERLEKKLEQYPNQLLRS--SVELAKDWRMDKYLRNLEAM-----ILIADKTITLV 120
              L   LE+++E Y  +  R      +A+      Y R          +   D+    +
Sbjct: 66  MHALHSALERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNILCGVDENGRGI 125

Query: 121 ITG-MGDVLEPENGVMAIGSGGSYALSAARAL--------MSTQNSAEEI---ARKAMSI 168
             G         +  MA G+  S  +S              +   S EE+    + AM+ 
Sbjct: 126 TCGFDAIGNYGFDAYMAKGTSSSLIMSILDNHLTSRNQQKHNEIQSLEELINVIKGAMTS 185

Query: 169 AADICVYTNHNIVLETLKV 187
           A +  ++T     +  +  
Sbjct: 186 AVERDIFTGDAAEVIVIDS 204


>gi|17380241|sp|O35523|PSB9_MUSPL RecName: Full=Proteasome subunit beta type-9; AltName: Full=Low
           molecular mass protein 2; AltName: Full=Macropain chain
           7; AltName: Full=Multicatalytic endopeptidase complex
           chain 7; AltName: Full=Proteasome chain 7; AltName:
           Full=Proteasome subunit beta-1i; AltName: Full=Really
           interesting new gene 12 protein; Flags: Precursor
 gi|2467357|dbj|BAA22580.1| low molecular mass polypeptide complex subunit 2 [Mus platythrix]
          Length = 219

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 71/182 (39%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L    I    +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPL-HQRIFCALSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +          +L        D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                    GSG SY      A      ++EE  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
            V
Sbjct: 199 TV 200


>gi|331245973|ref|XP_003335621.1| proteasome subunit beta type-3 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309314611|gb|EFP91202.1| proteasome subunit beta type-3 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 204

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 13/193 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++++  +++ +   G V IA D ++      +  N  KV ++     I G  G + D 
Sbjct: 2   SIMELNGGSVVAMVGKGCVAIACDLRLGNQALTVACNFEKVFQVTDKMFI-GLPGLATDT 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIAD---KTITLV 120
           FTL      ++  Y  +  R     +   L       K         ++A    K    +
Sbjct: 61  FTLKNVFRHRVNMYKMKEERVIEPQTMAHLISSTLYQKRFGPYFVEPVVAGLDSKNEPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYT 176
                   +      +  G+  S     A AL     + E++     + +  A D   Y+
Sbjct: 121 AATDLIGCINFAKDFVVSGTASSKLFGMAEALWEPDLAPEDLFETISQTLLNAVDRDAYS 180

Query: 177 NHNIVLETLKVGD 189
               V+  ++   
Sbjct: 181 GWGAVVWIIEADQ 193


>gi|284164848|ref|YP_003403127.1| proteasome endopeptidase complex subunit beta [Haloterrigena
           turkmenica DSM 5511]
 gi|302595690|sp|D2RQX3|PSB1_HALTV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|284014503|gb|ADB60454.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
           turkmenica DSM 5511]
          Length = 243

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 10/173 (5%)

Query: 25  GVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
             VVIA D + SLG   V   N +KV ++     +    GS   A + +  L  ++  Y 
Sbjct: 58  DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGAL-TLVGSVGGAQSFISSLRAEVNLYE 116

Query: 84  NQLLRSSVELAKDWRMDKY-----LRNLEAMILIADKTITLVITGMGDVLEPENGVMAIG 138
           ++        A       +        +  ++   D+  + V +        E+     G
Sbjct: 117 SRRGEQMSIDALATLAGNFARGGPFFAIHPILGGVDEEGSHVYSIDPAGGVMEDDYTVTG 176

Query: 139 SGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           SG   A            S EE   +A   +  A +    + + + L  +   
Sbjct: 177 SGMQLAYGHLEQAYEEDMSNEEAVSVAAHGIKSAVERDTGSGNGVFLCEITDE 229


>gi|254574222|ref|XP_002494220.1| Beta 6 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|238034019|emb|CAY72041.1| Beta 6 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|328353959|emb|CCA40356.1| 20S proteasome subunit beta 6 [Pichia pastoris CBS 7435]
          Length = 243

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 63/215 (29%), Gaps = 29/215 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   ++AGD + + G ++      KV  +G   ++   
Sbjct: 18  VPIEHQFNPYSDNGGTVLGIAGEDFAILAGDTRHTTGYSINSRYEPKVFSVGD-ELLITA 76

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLL-----RSSVELAKDWRMDKYLRNLEAMILIADKT 116
            G +AD   L++R   +L+ Y          +S+    +     K         +IA   
Sbjct: 77  NGFAADGDALVKRFRNQLKWYHFDHKKNLTIKSAARFIQHLLYGKRFFPYYVHTIIAGLD 136

Query: 117 ITL---VITGMGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNSAE------------ 159
                 V +             A G   S  +           Q   +            
Sbjct: 137 EEGKGAVYSFDPVGSYEREQCRAGGGAASLIMPFLDNQVNFKNQMDPDSNGTAKKELKYL 196

Query: 160 ------EIARKAMSIAADICVYTNHNIVLETLKVG 188
                  + R A S A +  +     + +  +   
Sbjct: 197 KLDEVISLVRDAFSSATERHINVGDGLEILIVTKD 231


>gi|242786404|ref|XP_002480798.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218720945|gb|EED20364.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 253

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 67/221 (30%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
                   +  + L +      ++AGD + + G  +    A KV ++G         +I+
Sbjct: 21  HSFNPYTDNGGSTLGIAGSDFCILAGDTRSTSGYNINSRYAPKVFKIGGDDETGEGAHIV 80

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L +       A   + 
Sbjct: 81  LSVVGFAADGQALKERLDSIVKVYRYQHGKPISVKACAQRLSTILYSKRFFPYYAHAILG 140

Query: 119 L--------VITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
                    + +             A G+  S  +      ++                 
Sbjct: 141 GLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNFKNQYIPGSGEGHALER 200

Query: 154 ------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                  +++ E++ R A + A +  +     + +  +   
Sbjct: 201 RTPAPLPRDTVEQLVRDAFTSAVERHIEVGDGLQMMIITKD 241


>gi|167535003|ref|XP_001749176.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772329|gb|EDQ85982.1| predicted protein [Monosiga brevicollis MX1]
          Length = 248

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 54/182 (29%), Gaps = 38/182 (20%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     VV+  D + +                                   +  
Sbjct: 38  GTTICGVIYKDGVVLGADTRATA-----------------------------VRAFAVAP 68

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPEN 132
           +     +        S          +Y  ++ A +++   D    ++ +        + 
Sbjct: 69  VRLPTRRASPTWWPRSSSCTVFRLTARYQGHVSAALVLGGVDINGPVLYSIHPHGSTDKL 128

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLKV 187
             + +GSG   A+    A      S EE   + R A  IAA I   + +  N+ L  +K 
Sbjct: 129 PYVTMGSGSLAAMGVFEAGFRKDMSEEEAKKLVRDA--IAAGIFNDLGSGSNVDLCVIKK 186

Query: 188 GD 189
           G+
Sbjct: 187 GE 188


>gi|118376326|ref|XP_001021345.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|89303112|gb|EAS01100.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 209

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 61/207 (29%), Gaps = 27/207 (13%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  ++L ++ +  V I  D ++      +  N +KV R+    I+ G  G + D 
Sbjct: 3   DPFSYNGGSMLAMKGEQCVAIGADRRLGAQFQTVATNFQKVFRIQDN-ILLGLTGLATDV 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            T    ++ K+  Y  +  +          +   L             +  +        
Sbjct: 62  QTFHRLIQYKVNLYRLRENKDMKVNTFVNLISATLYEKRWGPYFVSPIVAGLEYDEVKGV 121

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
                          E      G+G    + +  +           E+I  +++S   D 
Sbjct: 122 IPITATYDSIGCTSIEGEFQVGGTGADGLIGSCESFWRKGLKPDELEDIVAQSLSAGCDR 181

Query: 173 CV--------Y--TNHNIVLETLKVGD 189
            +        Y  T  N+ ++ LK   
Sbjct: 182 DILSGWGGVVYTLTKDNLSVKVLKTKQ 208


>gi|195121614|ref|XP_002005315.1| GI20414 [Drosophila mojavensis]
 gi|193910383|gb|EDW09250.1| GI20414 [Drosophila mojavensis]
          Length = 222

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ ++    I    +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTQISD-KIYCCRSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL-VITGMGDV 127
           +   L  + NQ  +  +          +  N    ++        D+     V +     
Sbjct: 74  VAYSLNYHRNQTNKEPLVWEAASEFRNFCYNYRDSLMAGIIVAGWDEERGGQVYSVPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG SY     +         EE     +KA+  A      +   + +  
Sbjct: 134 MLTHESCTIGGSGSSYIYGFVKEHYRLGMQMEECVDFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKD 197


>gi|118102948|ref|XP_418119.2| PREDICTED: similar to Psmb3 protein [Gallus gallus]
          Length = 205

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +   ++  + +K+  +G+   I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMRGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGERLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITL 119
            T+ +RL+ +L  Y  +  R             L  + R   Y        L        
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +             +  G+          +L       + +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMITEDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETISQAMLNAVDRDAI 180

Query: 176 TNHNIVLETLKVG 188
           +   +V+  ++  
Sbjct: 181 SGMGVVVHIIEKD 193


>gi|198423327|ref|XP_002125759.1| PREDICTED: similar to LOC496005 protein [Ciona intestinalis]
          Length = 205

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 65/194 (33%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  +  K+  + +   I G  G + D 
Sbjct: 2   SIMSYNGGAVVAMKGKNCVAIASDLRFGIQAQTVGMDFEKIFPMSERLYI-GLTGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAK---------DWRMDKYLRNLEAMILIADKTITL 119
            T+ +RL+ +L+ Y  +  R                + R   Y        L        
Sbjct: 61  QTVSQRLQFQLKLYELRENRQISPKTFLSVVSNLLYEKRFGPYFIEPVIAGLDPKTKEPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICV 174
           + +    G  +EPE+  +  G+          AL       +++     +A+  + D   
Sbjct: 121 IASCDLIGCPMEPED-FVVTGTCAIQMYGMCEALWRPDMEPDDLFECVSQALLNSVDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +    V+  ++  
Sbjct: 180 GSGWGAVVHIIEAD 193


>gi|302925511|ref|XP_003054110.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735051|gb|EEU48397.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 205

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 52/195 (26%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ L    +  N  K+ + G   +  G  G + 
Sbjct: 1   MSSPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD--VFLGLTGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  T+ +    K   Y  +  R+                 R   Y  +     L      
Sbjct: 59  DVNTVSDLFRYKTNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+           L       + +     +++  A D  
Sbjct: 119 PFICGFDSIGCIDFAKDFIVSGTASEQLFGMCEGLWEPDMEPDALFETISQSLLNAVDRD 178

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 179 ALSGWGAHVYIIEKD 193


>gi|326934090|ref|XP_003213128.1| PREDICTED: proteasome subunit beta type-3-like [Meleagris
           gallopavo]
          Length = 205

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +   ++  + +K+  +G+   I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMITTDFQKIFPMGERLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITL 119
            T+ +RL+ +L  Y  +  R             L  + R   Y        L        
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +             +  G+          +L       + +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMITEDFVVSGTCSEQMYGMCESLWEPDMEPDHLFETISQAMLNAVDRDAL 180

Query: 176 TNHNIVLETLKVG 188
           +   +V+  ++  
Sbjct: 181 SGMGVVVHIIEKD 193


>gi|241954356|ref|XP_002419899.1| proteasome component, putative [Candida dubliniensis CD36]
 gi|223643240|emb|CAX42114.1| proteasome component, putative [Candida dubliniensis CD36]
          Length = 245

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 70/216 (32%), Gaps = 30/216 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD +   G ++      K+  +G   I+   
Sbjct: 19  VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDD-ILMTA 77

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADK 115
            G +AD   L++R ++ L  Y           +S+    +     K L       LIA  
Sbjct: 78  NGFAADGIALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRLFPYYVSTLIAGL 137

Query: 116 TITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----------------- 155
                  V +             A G+  S  +      ++ +                 
Sbjct: 138 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQFVPGTDGKEKKPLKY 197

Query: 156 NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
            + EE   + R A + A +  +Y    + ++ +   
Sbjct: 198 LTLEEVIQLVRDAFTSAGERHIYVGDGLEIKIVTKD 233


>gi|123480905|ref|XP_001323441.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121906306|gb|EAY11218.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 216

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 12/196 (6%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +  +  +   TT+L ++    VV+A D + S G  +      K+  +    I A   G
Sbjct: 1   MSEYQFPKESMGTTLLAIQCTDGVVMASDSRTSSGSFIPNRATNKITEIQP-KIFAARCG 59

Query: 64  SSADAFTLLERLEKKLEQYPNQLL--------RSSVELAKDWRMDKYLRNLEAMILIADK 115
           ++AD   L   ++  L                 +S  +       +   +   ++   D 
Sbjct: 60  NAADTQFLARAVKNYLNALNITRENTDDSTILVASNVIRSLIVRYRQYLSAGVIVGGWDS 119

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI---AADI 172
               V +     +  +  + + GSG +Y  +          + EE  + A++    A   
Sbjct: 120 AGPQVYSIEVSGMAIKKKIASNGSGSTYIQAYIDQNYREDMTMEEATKFAIAAVTGAIIR 179

Query: 173 CVYTNHNIVLETLKVG 188
              +   + +  +   
Sbjct: 180 DGSSGGVVNIVQINAD 195


>gi|146415774|ref|XP_001483857.1| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 242

 Score = 88.9 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 66/216 (30%), Gaps = 30/216 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD +  +G ++      +V  +G   +    
Sbjct: 16  VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVVGYSINTRYEPRVFDVGDNIV-MTA 74

Query: 62  AGSSADAFTLLERLEKKLEQY-PNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            G  AD   L++R    L+ Y  +   +    L+    +   L                 
Sbjct: 75  NGFDADGAALIDRFRNSLKWYKFDHNGKRLSILSAARYIQHLLYGKRFFPYYVSTLIAGL 134

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----------------- 155
            D+    V +             A G+  S  +      ++ +                 
Sbjct: 135 DDEGRGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGSDGKKKKELRY 194

Query: 156 NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
            S EE   + R A + A +  +Y    + +  +   
Sbjct: 195 LSLEEVIQLVRDAFTSATERHIYVGDGLEILIVTKE 230


>gi|195383886|ref|XP_002050656.1| GJ20086 [Drosophila virilis]
 gi|194145453|gb|EDW61849.1| GJ20086 [Drosophila virilis]
          Length = 222

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ ++ +       +GS+AD   + + 
Sbjct: 15  GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTQISENIYCC-RSGSAADTQAIADI 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL-VITGMGDV 127
           +   L  + NQ  +  +          Y  N    +L        D+     V +     
Sbjct: 74  VAYSLNYHRNQTNKEPLVCEAASEFRNYCYNYRDSLLAGIIVAGWDEERGGQVYSVPLGG 133

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +    G    GSG SY     +         +E     +KA+  A      +   + +  
Sbjct: 134 MLTREGCTIGGSGSSYIYGFVKEHYRPGMPMDECIDFVKKAVQHAIYHDGSSGGVVRIGI 193

Query: 185 LKVG 188
           +   
Sbjct: 194 ITKN 197


>gi|225704138|gb|ACO07915.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
          Length = 225

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 31/185 (16%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +K   TTI  V     VV+  D + + G+ V      K+  +                
Sbjct: 38  KPMKT-GTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPN------------- 83

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGD 126
                        Y                + +Y   + A +++   D T   + T    
Sbjct: 84  ------------MYGRNPRVVMAVNILQDMLFRYRGQIGASLILGGVDCTGNHLYTVGPY 131

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLE 183
                   +A+GSG   AL               A+++ R A+       + + +NI + 
Sbjct: 132 GSIDNVPYLAMGSGDLAALGILEDRFKPNMELEEAKQLVRDAIHSGIMSDLGSGNNIDIC 191

Query: 184 TLKVG 188
            +   
Sbjct: 192 VITKQ 196


>gi|62087736|dbj|BAD92315.1| proteasome beta 1 subunit variant [Homo sapiens]
          Length = 196

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 53/153 (34%), Gaps = 9/153 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 34  RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 92

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +      
Sbjct: 93  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKG 152

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARAL 151
              +         +   A GS  +        L
Sbjct: 153 AVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNL 185


>gi|21465651|pdb|1IRU|J Chain J, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465665|pdb|1IRU|X Chain X, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|565647|dbj|BAA05645.1| proteasome subunit HsC10-II [Homo sapiens]
 gi|1091575|prf||2021261C proteasome:SUBUNIT=HsC10-II
          Length = 205

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + +  +   +K         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       + +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHIIEKD 193


>gi|50309707|ref|XP_454865.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644000|emb|CAG99952.1| KLLA0E20197p [Kluyveromyces lactis]
          Length = 205

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 51/184 (27%), Gaps = 15/184 (8%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++   ++ +     V I  D ++      +  N  K+   G   +  G  G + 
Sbjct: 1   MSDPSSINGGIVVAMTGKDCVAIGCDLRLGSQSLGVANNFEKIFHYGH--VFLGLTGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  +  R                + R   Y        + +    
Sbjct: 59  DVLTLSESFRYKTNLYKLREDRPIEPETFTQLVSTSLYEKRFGPYFVGPVVAGINSKSGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L      A+++     +A+  AAD  
Sbjct: 119 PFIAGFDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEADDLFETISQALLNAADRD 178

Query: 174 VYTN 177
             + 
Sbjct: 179 ALSG 182


>gi|3811395|gb|AAC69911.1| LMP 2 [Mus musculus]
          Length = 199

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 10/181 (5%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ V  DG VV+  D +VS G  V+     K+  L +    A  +GS+ADA  + +  
Sbjct: 1   TTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQHIFCA-LSGSAADAQAIADMA 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVLE 129
             +LE +  +L    + LA    +          +L        D+     + G    + 
Sbjct: 60  AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQCEGGQVYGTMGGML 119

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLK 186
                   GSG SY      A      + EE  R    A+++A +    +   I L T+ 
Sbjct: 120 IRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTIT 179

Query: 187 V 187
            
Sbjct: 180 A 180


>gi|195430422|ref|XP_002063254.1| GK21488 [Drosophila willistoni]
 gi|194159339|gb|EDW74240.1| GK21488 [Drosophila willistoni]
          Length = 225

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 58/184 (31%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D + S G  V      K+ R+    I    +GS+AD   + + 
Sbjct: 14  GTTIMAVEFDGGVVVGADSRTSSGAYVANRVTDKLTRITD-KIYCCRSGSAADTQAIADI 72

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  +  Q  R +           +  N    ++               V +     
Sbjct: 73  VAYSLNYHEIQTNRDAEVWEAASEFRNFCYNYRDSLMAGIIVAGWDAQRGGQVYSIPLGG 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +         GSG S+     R         EE     +KA+  A      +   + +  
Sbjct: 133 MLTREACTIGGSGSSFIYGFVREHYREGMQKEECVEFVKKAVQHAIYHDGSSGGVVRIGI 192

Query: 185 LKVG 188
           +   
Sbjct: 193 ITED 196


>gi|156036470|ref|XP_001586346.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980]
 gi|154698329|gb|EDN98067.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 206

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 54/195 (27%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ L    +  N  K+   G    + G  G + 
Sbjct: 1   MSSPFSINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIA-------DKTI 117
           D  T+ +    K+  Y  +  R  S   +A       Y R      +             
Sbjct: 60  DVSTVSDLFRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVIAGLDQKTGK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+           L       E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGAHVYIIEKD 194


>gi|91084563|ref|XP_973600.1| PREDICTED: similar to proteasome beta 3 subunit [Tribolium
           castaneum]
          Length = 210

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 63/202 (31%), Gaps = 20/202 (9%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +  +    +  +   ++ ++ D  V IA D +  +    +  N +K+  +G    + G  
Sbjct: 1   MSNNIQSILAYNGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYV-GLP 59

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G + D  T++E+L  +   Y  +  R          +   L               +V  
Sbjct: 60  GLATDTQTVMEKLRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFV---EPIVAG 116

Query: 123 GMGDVLEP-------------ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAM 166
                 EP              N  +  G+  S       +L       +++     +A+
Sbjct: 117 LDPGTYEPYICNMDLIGCPNQPNDFVVGGTASSQLFGMCESLWEPNLGPDDLFETTSQAL 176

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             A D    +    V+  ++  
Sbjct: 177 INAFDRDAISGWGAVVYIIEKD 198


>gi|195497244|ref|XP_002096019.1| GE25306 [Drosophila yakuba]
 gi|194182120|gb|EDW95731.1| GE25306 [Drosophila yakuba]
          Length = 324

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ +  DG V+I  + + + G  +    +RKV  L      +G AG + D   L+E 
Sbjct: 49  GTTLVGIVFDGGVIIGAESRATNGNIIPSKKSRKVCELQTNIFASG-AGVARDTNALMEL 107

Query: 75  LEKKLEQYPNQLL-RSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDV 127
              +L  +      R       +  M + L      +         D +   +     D 
Sbjct: 108 TRAQLALHRMNTGFRRVPVRCANQMMRQLLFRFNGNMQANVIIGGVDASGAHLFCTRFDG 167

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
                   ++GSG   A+S   +  S      SA  +A  A+++     + +   + L  
Sbjct: 168 TTDPAPFTSLGSGNLSAMSILESRWSEDLSEKSACALACDAVAVGMKNDLNSGGMVNLCI 227

Query: 185 LKVG 188
           ++  
Sbjct: 228 VRRD 231


>gi|238482157|ref|XP_002372317.1| proteasome component Pre3, putative [Aspergillus flavus NRRL3357]
 gi|317139101|ref|XP_001817267.2| proteasome component PRE3 [Aspergillus oryzae RIB40]
 gi|220700367|gb|EED56705.1| proteasome component Pre3, putative [Aspergillus flavus NRRL3357]
          Length = 232

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 53/184 (28%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 30  GTSIMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y      +           +     + M+                V +     
Sbjct: 89  VSYHLNMYSITNNEAPSTQVAASLFQELCYENKDMLSAGIIIAGYDPRHGGQVYSIPLGG 148

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + EE     R A+  A      +   I L  
Sbjct: 149 SLHKQPYSIGGSGSTYIYGYCDANWKENMTEEEGINFVRGALREAIKWDGSSGGVIRLVV 208

Query: 185 LKVG 188
           L   
Sbjct: 209 LTAK 212


>gi|46122507|ref|XP_385807.1| hypothetical protein FG05631.1 [Gibberella zeae PH-1]
          Length = 212

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 12  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDTIWCC-RSGSAADTQAVADI 70

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLR----NLEAMILIADKTITL---VITGMGDV 127
           ++ +L  +     +  +         +        L A ++IA         V +     
Sbjct: 71  VQYQLGLFAMTNGKPPMTQTAASIFQEICYANKDRLSAGLIIAGWDERFGGQVYSIPLGG 130

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A          A    + A+  A      +   I +  
Sbjct: 131 SLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALREAIKWDGSSGGVIRMVV 190

Query: 185 LKVG 188
           L   
Sbjct: 191 LTKE 194


>gi|195398909|ref|XP_002058063.1| GJ15696 [Drosophila virilis]
 gi|194150487|gb|EDW66171.1| GJ15696 [Drosophila virilis]
          Length = 256

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 24/200 (12%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             +  T+L +  +  VVIA D ++  G ++   +  KV  +    ++A   G   D  ++
Sbjct: 46  DTNGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVA-STGLWCDTISM 104

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTITL---VITG 123
              L+ +++ Y  +  +     A    +      +         ++A         V   
Sbjct: 105 TSLLQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYY 164

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---------------AEEIARKAMSI 168
                        +GS G   L A    +  ++                A  +AR  + +
Sbjct: 165 DPVGHMERCRYRVLGSSGKMLLPALDHGLGWEHHTLVPPDQYPPLDKERALALARNCLRV 224

Query: 169 AADICVYTNHNIVLETLKVG 188
           A+D  ++T    VL+ +   
Sbjct: 225 ASDRDLFTGDTGVLKLITKD 244


>gi|54696308|gb|AAV38526.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
           construct]
 gi|60812279|gb|AAX36205.1| proteasome subunit beta type 3 [synthetic construct]
          Length = 206

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + +  +   +K         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       + +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHIIEKD 193


>gi|302902756|ref|XP_003048711.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729645|gb|EEU42998.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 212

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 12  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDTIWCC-RSGSAADTQAVADI 70

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDV 127
           ++ +L  +     +  +                  L A ++IA         V +     
Sbjct: 71  VQYQLGLFAMMNGKPPMTQTAASIFQEICYSNKDRLSAGLIIAGWDERFGGQVYSIPLGG 130

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A          A    + A+  A      +   I +  
Sbjct: 131 SLHKQSYAIGGSGSTYIYGYCDANWREGMEKDDAVNFVKGALREAIKWDGSSGGVIRMVV 190

Query: 185 LKVG 188
           L   
Sbjct: 191 LTKD 194


>gi|307248793|ref|ZP_07530806.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306854720|gb|EFM86910.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 97

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/96 (52%), Positives = 74/96 (77%), Gaps = 2/96 (2%)

Query: 91  VELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
           +ELAK+WR ++ LR LEAM+++A+++  L+++G GDV+EPE  V+AIGSGG+YA +AA A
Sbjct: 1   MELAKEWRTERSLRKLEAMMIVANESEFLLVSGSGDVIEPEQDVLAIGSGGNYAKAAALA 60

Query: 151 LMST--QNSAEEIARKAMSIAADICVYTNHNIVLET 184
           L+ T    SA+EI  +A+ IA DI +Y+NHN V+E 
Sbjct: 61  LLRTQNNLSAKEIVAEALKIAGDIDIYSNHNHVIEE 96


>gi|316976444|gb|EFV59740.1| proteasome subunit beta type-5 [Trichinella spiralis]
          Length = 307

 Score = 88.5 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 61/213 (28%), Gaps = 43/213 (20%)

Query: 13  MHATTILTVRKDG-------VVVIAGDGQVSLGQTVM---------KANARKVRRLGKGN 56
           M  TT L     G        ++ A D + S G+ +           ++         G 
Sbjct: 58  MKGTTTLAFIYKGKTAADRGGIMFAVDSRASSGKYICIHIQVLVLKTSSTVMKVIPLSGR 117

Query: 57  IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--- 113
           I++  AG +AD    L  + K  + Y  +        A    +   +       L     
Sbjct: 118 ILSTLAGGAADCQFWLRVISKICKLYELRYKCEISVAAATKTLQNIILEYLGYGLSMGMI 177

Query: 114 ---------------------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM 152
                                DK    +     +    ++ + + GSG   A        
Sbjct: 178 VGGFNHDVRSHHHHLLFSIFDDKYGPALYFLDSEGTRKKSHLFSCGSGSLNAYGILDTFY 237

Query: 153 STQNS---AEEIARKAMSIAADICVYTNHNIVL 182
               +   A+++AR+A+  A    + +     +
Sbjct: 238 KPSMTDDEAKDLARRAIMHATYRDIGSGGQCSV 270


>gi|308162461|gb|EFO64857.1| Proteasome subunit beta type 9 precursor [Giardia lamblia P15]
          Length = 221

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 13/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSA--DAFT 70
            TTI+ ++    V+++ D + ++G  V+     KV  +       IAG    +       
Sbjct: 25  GTTIIVMKYSNGVLLSADTRATMGNLVVDRFIPKVLPITDKIYTCIAGSVSHAQFLVNEV 84

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGM 124
               + ++++ + N      +       +  YL            +   D T    I  M
Sbjct: 85  RAHLMTQQMDLHANLNGMDPMVATAANIISIYLHKYREFLHAAFILGGVDNTGFHCINSM 144

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIV 181
                 E      GSGG +     + L + + +   A  +A K +  A  +   +   + 
Sbjct: 145 IGGSVLEEDYSISGSGGVFIKGLMKELYNPELTRAEAINLAHKLLKTAISLDTKSGGFMR 204

Query: 182 LETLK 186
              ++
Sbjct: 205 FVAIE 209


>gi|212537585|ref|XP_002148948.1| proteasome component Pup3, putative [Penicillium marneffei ATCC
           18224]
 gi|210068690|gb|EEA22781.1| proteasome component Pup3, putative [Penicillium marneffei ATCC
           18224]
          Length = 206

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 20/195 (10%), Positives = 51/195 (26%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  K+        + G  G + 
Sbjct: 1   MSSPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYL-GITGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  T+ +    K+  Y  +  R                  R   Y  +     +      
Sbjct: 60  DVTTVSDLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+           L       +++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGANVYIIEKD 194


>gi|310800635|gb|EFQ35528.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 228

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 29  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDV 127
           ++ +L  Y  +  +  +                  L A ++IA         V +     
Sbjct: 88  VQYQLGMYAMRNGKPPMTQTAAAIFQEVCYANKDRLTAGLIIAGWDERHGGQVYSIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y                 A +  + ++  A      +   I +  
Sbjct: 148 SLHKQSYAIGGSGSTYIYGYCDEHWREGMEEQDAVDFVKGSLKEAIKWDGSSGGVIRMVV 207

Query: 185 LKVG 188
           L   
Sbjct: 208 LTAK 211


>gi|22538465|ref|NP_002786.2| proteasome subunit beta type-3 [Homo sapiens]
 gi|20532411|sp|P49720|PSB3_HUMAN RecName: Full=Proteasome subunit beta type-3; AltName:
           Full=Proteasome chain 13; AltName: Full=Proteasome
           component C10-II; AltName: Full=Proteasome theta chain
 gi|15278174|gb|AAH13008.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Homo
           sapiens]
 gi|119580935|gb|EAW60531.1| proteasome (prosome, macropain) subunit, beta type, 3 [Homo
           sapiens]
 gi|261860656|dbj|BAI46850.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
           construct]
          Length = 205

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 67/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+ +L  Y  +  R     + + +  +   +K         +IA          
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       + +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHIIEKD 193


>gi|307175918|gb|EFN65731.1| Proteasome subunit beta type-3 [Camponotus floridanus]
          Length = 286

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 60/198 (30%), Gaps = 14/198 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M D    +  +   ++ ++    V IA D +  +    +  + +K+  +     I+   G
Sbjct: 78  MYDPQSILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIFEMEPHLFIS-LPG 136

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELA-----KDWRMDKYLRNLEAMILIADKTI- 117
            + D  T++ERL  +L  Y  +  R            +   +K         +IA     
Sbjct: 137 LATDTQTVMERLRFRLNLYELKENRKIHPKTFTAMVSNLLYEKRFGPYFVEPIIAGLDPV 196

Query: 118 ---TLVITGMGDVLE-PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAA 170
                +               +  G+          +L        E+     +A+  A 
Sbjct: 197 TFEPFICNMDLIGSRNMAEDFVVGGTCTEQLYGMCESLYEPDLEPNELFETISQALVNAF 256

Query: 171 DICVYTNHNIVLETLKVG 188
           D    +    V+  ++  
Sbjct: 257 DRDAISGWGAVVYIIEKD 274


>gi|194898667|ref|XP_001978889.1| GG11178 [Drosophila erecta]
 gi|190650592|gb|EDV47847.1| GG11178 [Drosophila erecta]
          Length = 322

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG V+I  + + +    +    +RK+ +L    I AG AG + D   L++ 
Sbjct: 49  GTTIVGIVFDGGVIIGAESRATSANIIPSNRSRKISQLQTN-IFAGGAGVAGDTTALMQL 107

Query: 75  LEKKLEQYPNQLL-RSSVELAKDWRMDKYLRNLEAMI------LIADKTITLVITGMGDV 127
           +  +LE +      R       +  M + L      +         D +   +     D 
Sbjct: 108 MRAQLELHRMNTGFRRVPVRCANQMMRQLLFRFNGNMQANVVIGGVDASGAHLFCTRFDG 167

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAE-EIARKAMSIAAD 171
                   ++GSG   A+S   +  S   S E   A    ++AA 
Sbjct: 168 TTDSAPFTSLGSGDQSAMSILESRWSEDISEESACALVCDAVAAG 212


>gi|332017819|gb|EGI58480.1| Proteasome subunit beta type-3 [Acromyrmex echinatior]
          Length = 238

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 60/193 (31%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  + +K+  +G    ++   G + D 
Sbjct: 35  SILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTITCDFQKIYEMGPHLYVS-LPGLATDT 93

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELA-----KDWRMDKYLRNLEAMILIADKTI----TL 119
            T++ERL  +L  Y  +  R            +   ++         ++A          
Sbjct: 94  QTVMERLRFRLNLYELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLDPVTFEPF 153

Query: 120 VITGMGDVLE-PENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVY 175
           +               +  G+          +L       EE+     +A+  A D    
Sbjct: 154 ICNMDLIGSRNIAEDFVVGGTCTEQLYGMCESLYEPNLGPEELFETVSQALVNAFDRDAI 213

Query: 176 TNHNIVLETLKVG 188
           +    V+  ++  
Sbjct: 214 SGWGAVVYIIEKD 226


>gi|67539228|ref|XP_663388.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
 gi|40743687|gb|EAA62877.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
 gi|259484727|tpe|CBF81196.1| TPA: putative proteasome core component, beta 6 subunit (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 261

 Score = 88.1 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 64/221 (28%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  ++L +      V+AGD + + G  +      KV ++G         +I+
Sbjct: 29  HSFYPYTDNGGSVLGITGKDFAVLAGDTRSTSGYNINSRYVPKVFKIGGEDETGKGAHIL 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L               
Sbjct: 89  LSVVGFAADGLALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVQAILA 148

Query: 114 --DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSA 158
             D+     +               + G+  S  +      ++                A
Sbjct: 149 GLDEEGKGALYGYDPVGSYEREQCRSAGAASSLIMPFLDNQVNLKNQYIPGSGEGHALEA 208

Query: 159 -----------EEIARKAMSIAADICVYTNHNIVLETLKVG 188
                      E++ R A + A +  +     + +  +   
Sbjct: 209 RKPEPMSRETVEQLVRDAFTSAVERHIEVGDGLQMLVITAD 249


>gi|320587372|gb|EFW99852.1| proteasome component [Grosmannia clavigera kw1407]
          Length = 229

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 29  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDTIWCC-RSGSAADTQAVADI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           ++ +L  +     +                     L A ++IA         V +     
Sbjct: 88  VQYQLGLFAMLNGKPPTTQTAAAIFQELCYSNKDQLSAGLIIAGWDERYGGQVYSIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      +          A +  + A+  A      +   I +  
Sbjct: 148 SLHKQAYAIGGSGSTYIYGYCDSNWREGMEKDEAVDFVKGALKEAIRWDGSSGGVIRMVV 207

Query: 185 LKVG 188
           L   
Sbjct: 208 LTRD 211


>gi|308161925|gb|EFO64356.1| Proteasome subunit beta type 7 precursor [Giardia lamblia P15]
          Length = 247

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 10/187 (5%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            K   TTI+ +     V++A D + + G  VM  N +K+  + +   +A  AG++AD   
Sbjct: 37  FKKTGTTIMGLTFKDGVILAADTRSTGGPVVMNKNKKKLVCINEQMYMA-GAGTAADTAA 95

Query: 71  LLERLEKKLEQYPNQLLRSSVELAK----DWRMDKYLRNLEAMILIA--DKTITLVITGM 124
           +       L  +  +  R  +  +        + +Y+  + A ++IA  D     + +  
Sbjct: 96  VGRMAASSLRLHAYKTGRKPLVQSAVKLISDHLFRYMGYVSAYVIIAGVDYKGAHLCSID 155

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIV 181
                     +  GSG   A S              A E A KA+       + +   + 
Sbjct: 156 AHGSITAQPFVTDGSGRLAAQSMLEKHWKPNMEENDAVECACKAVEAGVFNDLGSGSGVD 215

Query: 182 LETLKVG 188
           L  L++ 
Sbjct: 216 LVILRLD 222


>gi|195398923|ref|XP_002058070.1| GJ15881 [Drosophila virilis]
 gi|194150494|gb|EDW66178.1| GJ15881 [Drosophila virilis]
          Length = 262

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 67/200 (33%), Gaps = 24/200 (12%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             +  T+L +  +  VVIA D ++  G ++   +  KV  +    ++A   G   D  ++
Sbjct: 52  DTNGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVA-STGLWCDTISM 110

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTITL---VITG 123
              L+ +++ Y  +  +     A    +      +         ++A         V   
Sbjct: 111 TSLLQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYY 170

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---------------AEEIARKAMSI 168
                        +GS G   L A    +  ++                A  +AR  + +
Sbjct: 171 DPVGHMERCRYRVLGSSGKMLLPALDHGLGWEHHTLVPPDQYPPLDKERALALARNCLRV 230

Query: 169 AADICVYTNHNIVLETLKVG 188
           A+D  ++T    VL+ +   
Sbjct: 231 ASDRDLFTGDTGVLKLITKD 250


>gi|212543349|ref|XP_002151829.1| proteasome component Prs3, putative [Penicillium marneffei ATCC
           18224]
 gi|210066736|gb|EEA20829.1| proteasome component Prs3, putative [Penicillium marneffei ATCC
           18224]
          Length = 252

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 67/221 (30%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
                   +  + L +      ++AGD + + G  +    A K+ ++G         +I+
Sbjct: 20  HSFNPYTDNGGSTLGIAGSDFCILAGDTRSTSGYNINTRYAPKLFKIGGDDETGEGAHIV 79

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L +       A   + 
Sbjct: 80  LSVVGFAADGHALKERLDSIVKVYRYQHGKPITVNACAQRLSTILYSKRFFPYYAYAILG 139

Query: 119 L--------VITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
                    + +             A G+  S  +      ++                 
Sbjct: 140 GLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNFKNQYIPESGEGHALER 199

Query: 154 ------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                  Q++ E++ R A + A +  +     + +  +   
Sbjct: 200 RTPAPLPQDTVEQLVRDAFTSAVERHIEVGDGLQMMIITKD 240


>gi|255712483|ref|XP_002552524.1| KLTH0C06886p [Lachancea thermotolerans]
 gi|238933903|emb|CAR22086.1| KLTH0C06886p [Lachancea thermotolerans]
          Length = 205

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 54/195 (27%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++   ++ +     V IA D ++      +  N  K+   G   +  G  G + 
Sbjct: 1   MSDPSSINGGIVVAMTGKDCVAIACDLRLGSQSLGVANNFEKIFHYGH--VFLGLTGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  +  R                + R   Y        + +    
Sbjct: 59  DVTTLSETFRYKTNMYKLKEDRFIEPETFTQLVSSTLYEKRFGPYFTGPVVAGINSRTGK 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       E++     +A+  AAD  
Sbjct: 119 PYISGFDLIGCIDEAKDFVVSGTASEQLFGMCESLYEPNLEPEDLFETISQALLNAADRD 178

Query: 174 VYTNHNIVLETLKVG 188
             +     +  +K  
Sbjct: 179 ALSGWGAAVYIIKKD 193


>gi|156848022|ref|XP_001646894.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117575|gb|EDO19036.1| hypothetical protein Kpol_2002p109 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 215

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMGDVL 128
           ++  LE Y  Q    S E+A         +   NL A I++A         V +      
Sbjct: 78  VQYHLEMYTAQYGEPSTEVAASIFKTLCYENKDNLTAGIIVAGYDEANKGQVYSIPLGGS 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETL 185
                    GSG ++             + EE     + ++S A      +   I +  L
Sbjct: 138 VHRQPYAIAGSGSTFIYGYCDKNFKEDMTKEETIEFMKHSLSQAIKWDGSSGGVIRMVVL 197

Query: 186 KVG 188
              
Sbjct: 198 TKD 200


>gi|224473832|gb|ACN49171.1| antigen processing proteasome-associated protein [Oryzias
           luzonensis]
          Length = 217

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 63/183 (34%), Gaps = 12/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL    DG VVI  D + S+ G+ V      KV ++         AGS ADA  + +
Sbjct: 16  GTTILAAVFDGGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCC-MAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + +L  +  Q+    + ++               L+A  + A         V      
Sbjct: 75  TAKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEELQAGFITAGWDRKKGPQVYVVSLG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +     V   GSG +Y      A      + EE    A  A+++A      +     L 
Sbjct: 135 GMLIGQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVANLV 194

Query: 184 TLK 186
            + 
Sbjct: 195 VIT 197


>gi|149043358|gb|EDL96809.1| proteosome (prosome, macropain) subunit, beta type 8, isoform CRA_b
           [Rattus norvegicus]
          Length = 206

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 1/99 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +    V++A D + S G  +      KV  +    ++   +G +AD      
Sbjct: 71  HGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPY-LLGTMSGCAADCQYWER 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI 112
            L K+   Y  +        A    +   +       L 
Sbjct: 130 LLAKECRLYYLRNGERISVSAASKLLSNMMLQSTERPLC 168


>gi|119175342|ref|XP_001239915.1| conserved hypothetical protein [Coccidioides immitis RS]
 gi|303314835|ref|XP_003067426.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240107094|gb|EER25281.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320037775|gb|EFW19712.1| proteasome component PUP3 [Coccidioides posadasii str. Silveira]
          Length = 206

 Score = 88.1 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 53/193 (27%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
               ++    + +     V IA D ++ +    +  N  K+        + G  G + D 
Sbjct: 3   SPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYL-GLTGLATDV 61

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTI----TL 119
            ++ + L  K+  Y  +  R          +      K         ++A          
Sbjct: 62  ASVSDLLRYKVNLYRLREERQIAPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPF 121

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           +        ++     +  G+           L       E++     +A+  A D    
Sbjct: 122 ICGFDSIGCIDFAKDFIVSGTASDQLFGMCEGLWEPDLGPEDLFETISQALLNAVDRDAL 181

Query: 176 TNHNIVLETLKVG 188
           +     +  ++  
Sbjct: 182 SGWGAHVYIIEKD 194


>gi|197128389|gb|ACH44887.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
 gi|197128390|gb|ACH44888.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
          Length = 205

 Score = 87.7 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 64/196 (32%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   +L +R  G V IA D +  +    +  + +++  +G+  ++   AG + D 
Sbjct: 2   SILAYNGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLG-LAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            ++ +RL+ +L  Y  +  R          +   L         A     ++       L
Sbjct: 61  QSVAQRLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYA---EPVIAGLDPVSL 117

Query: 129 EPENG-------------VMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP                 +  G+          +L       E +     +AM  A D 
Sbjct: 118 EPFICSLDLIGCPMVTQDFVLSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +   +V+  ++  
Sbjct: 178 DAISGMGVVVHVIEKD 193


>gi|190348096|gb|EDK40488.2| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 242

 Score = 87.7 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 30/216 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD +  +G ++      +V  +G   +    
Sbjct: 16  VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVVGYSINTRYEPRVFDVGDNIV-MTA 74

Query: 62  AGSSADAFTLLERLEKKLEQY-PNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            G  AD   L++R    L+ Y  +   +     +    +   L                 
Sbjct: 75  NGFDADGAALIDRFRNSLKWYKFDHNGKRLSISSAARYIQHLLYGKRFFPYYVSTLIAGL 134

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----------------- 155
            D+    V +             A G+  S  +      ++ +                 
Sbjct: 135 DDEGRGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGSDGKKKKELRY 194

Query: 156 NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
            S EE   + R A + A +  +Y    + +  +   
Sbjct: 195 LSLEEVIQLVRDAFTSATERHIYVGDGLEILIVTKE 230


>gi|2118156|pir||I49121 proteasome endopeptidase complex (EC 3.4.25.1) delta chain - mouse
 gi|984940|gb|AAA75376.1| delta proteasome subunit [Mus musculus]
          Length = 202

 Score = 87.7 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 58/176 (32%), Gaps = 11/176 (6%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           V+ +G VV+  D + + G  +      K+  +         +GS+AD   + + +  +L 
Sbjct: 3   VQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVTDAVTYQLG 61

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPENG 133
            +  +L    +         +        ++          +    V +     +     
Sbjct: 62  FHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQS 121

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLK 186
               GSG SY      A      + +E  +    A+++A +    +   I L  ++
Sbjct: 122 FAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQ 177


>gi|114326381|ref|NP_001041551.1| proteasome subunit beta type-9 [Canis lupus familiaris]
 gi|55162808|emb|CAH63456.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional protease 2) [Canis lupus familiaris]
          Length = 209

 Score = 87.7 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 10  GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRAFNKLSPLHQHIYCA-LSGSAADAQAMADM 68

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +               MI   D+     + G    +
Sbjct: 69  AAYQLELHGLELEEPPLVLAAANVVRNISYKYREDLSAHLMIAGWDRRDGGQVYGTMGGM 128

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETL 185
                    GSG +Y      A      S EE       A+++A +    +   I L T+
Sbjct: 129 LTRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRSFTTNAIALAMNRDGSSGGVIHLVTI 188

Query: 186 KV 187
             
Sbjct: 189 TA 190


>gi|170085607|ref|XP_001874027.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
 gi|164651579|gb|EDR15819.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
          Length = 208

 Score = 87.7 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 57/196 (29%), Gaps = 17/196 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +  +++ +     V IA D ++      + +N +K+  +     + G  G + D 
Sbjct: 2   SIMEYNGGSVVAMVGKDCVAIASDLRLGNQALGISSNFQKIFPITDRIYL-GLPGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------------DKT 116
            TL ER   ++  Y  +  R          +   L                         
Sbjct: 61  TTLRERFRFRVNMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFVEPVMAGLSKTPSGGV 120

Query: 117 ITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
              +        L      +  G+  S     A  L      AE++     + +  A D 
Sbjct: 121 KPFIAATDLIGCLNFAKDFVVAGTASSKLYGVAEGLWEPDLEAEDLFETISQTLLNAVDR 180

Query: 173 CVYTNHNIVLETLKVG 188
             Y+    ++  +   
Sbjct: 181 DAYSGWGCIVHVITKD 196


>gi|263173494|gb|ACY69954.1| proteasome subunit beta type-6 [Cimex lectularius]
          Length = 229

 Score = 87.7 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 12/187 (6%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           M  TTI+       VVI  D + S+G   V    + K+ ++         +G++AD   +
Sbjct: 24  MTGTTIMACTFSDGVVIGADSRTSVGSSYVANRVSDKLTKVTDYIYCC-RSGAAADTQAV 82

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTI---TLVITGM 124
            + +   L  Y ++     +              Y   L A I++A         V    
Sbjct: 83  ADIVSYHLAFYKSETGEEPLVSTAAALFRELCYNYRNKLTAGIIVAGWDRVKGGQVYMVP 142

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIV 181
              +  E      GSG +Y      A      +++E     ++A+++A      +   I 
Sbjct: 143 LGGMCVEQKYAMGGSGSTYIYGFTDANYREGMNSKECKAFIKQAIALAIRRDGSSGGVIR 202

Query: 182 LETLKVG 188
           +  +   
Sbjct: 203 MGVITKD 209


>gi|300702270|ref|XP_002995154.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
 gi|239604000|gb|EEQ81483.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
          Length = 282

 Score = 87.7 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 18/189 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +    + ++ T + ++ + ++++A D +      +   N  K+  +G    +    G  
Sbjct: 74  PQFNPYEDNSGTAVAIKLNDLIIVAADTRHCSEMGIYSRNTPKIYYIGDY--LVTITGFY 131

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-----KTITLV 120
           AD   L+  L+ ++  Y +    S   LA       Y + L                  V
Sbjct: 132 ADGIELINILKYQVLLYESFNKISIHSLANLASKVMYSKRLFPYYSYVTLSGFCDGEPFV 191

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST-----------QNSAEEIARKAMSIA 169
            +        +   +  GSG S+      +L+             +   + + RKA   A
Sbjct: 192 YSFDCLGHFEKVSTVCNGSGASFIQPLLDSLIEKKNWIGESPVVDEEYTKSVVRKAFDAA 251

Query: 170 ADICVYTNH 178
           ++  V T  
Sbjct: 252 SERDVKTGD 260


>gi|242796933|ref|XP_002482907.1| proteasome component Pre3, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218719495|gb|EED18915.1| proteasome component Pre3, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 231

 Score = 87.7 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 29  GTSIMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDV 127
           +   L  Y                           L A I+IA         V +     
Sbjct: 88  VSYHLNMYGIVNNEPPSTQTAAALFQELCYDNKDQLSAGIIIAGYDRRHGGQVYSIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + EE     + A+S A      +   I L  
Sbjct: 148 SLHKQAYAIGGSGSTYIYGYCDANWKEGMTEEEGVNFVKSALSEAIKWDGSSGGVIRLVV 207

Query: 185 LKVG 188
           L   
Sbjct: 208 LTAK 211


>gi|159474370|ref|XP_001695298.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
 gi|158275781|gb|EDP01556.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
          Length = 212

 Score = 87.7 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G V++A D + S G  +      K+  L    +    +GS+AD   +   
Sbjct: 2   GTTIIAVTFNGGVILAADSRTSTGNYIANRVTDKITPLCDN-VYTLRSGSAADTQAIAGY 60

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL----EAMILIADKTITL---VITGMGDV 127
           ++  + Q+  +             +     N     +A +++A         V +     
Sbjct: 61  VQHFIAQHQAEEGEHINVKTAANLVKMMAYNNKDNLQAGLIVAGYDKHGGGQVFSISLGG 120

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              E      GSG +Y             S   A +   KA+  A      +   +   T
Sbjct: 121 TITETSFAMSGSGSTYINGFVDKYWREGMSEQEAMDFVTKALRYAMTWDASSGGCMRTVT 180

Query: 185 LKV 187
           +  
Sbjct: 181 ITA 183


>gi|156844743|ref|XP_001645433.1| hypothetical protein Kpol_534p57 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116095|gb|EDO17575.1| hypothetical protein Kpol_534p57 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 215

 Score = 87.7 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMGDVL 128
           ++  LE Y  Q    S E+A         +   NL A I++A         V +      
Sbjct: 78  VQYHLEMYTAQYGEPSTEVAASIFKTLCYENKDNLTAGIIVAGYDEANKGQVYSIPLGGS 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETL 185
                    GSG ++             + EE     + ++S A      +   I +  L
Sbjct: 138 VHRQPYAIAGSGSAFIYGYCDKNFKEDMTKEETIEFMKHSLSQAIKWDGSSGGVIRMVVL 197

Query: 186 KVG 188
              
Sbjct: 198 TKD 200


>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
 gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
          Length = 257

 Score = 87.7 bits (216), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 63/207 (30%), Gaps = 27/207 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           + +G +      +  +I+ +  D   VIAGD + S G  +      KV RL     +A  
Sbjct: 1   MPVGHQFSPYTSNGGSIMAIHGDDYCVIAGDTRQSEGYNIQTRYKPKVFRLTDKATLAT- 59

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV- 120
            G +ADA  L+ R++ +LE Y +   RS    A    +   L +           +  + 
Sbjct: 60  NGFAADAEALVARVKTRLEMYQHTHGRSMPLHAIARMLSTILYSKRFFPYYVYNILGGID 119

Query: 121 -------ITGMGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNS-------------- 157
                                 A G+             +    NS              
Sbjct: 120 EEGRGAVYGYDPVGSYERIVCCASGAAQGLLQPFLDNQVMFKNLNSTAETKIPEPGHLPL 179

Query: 158 --AEEIARKAMSIAADICVYTNHNIVL 182
             A  I   + + A +  +     + +
Sbjct: 180 QHALRIVMDSFTSATERHIEVGDGLEV 206


>gi|281344355|gb|EFB19939.1| hypothetical protein PANDA_004975 [Ailuropoda melanoleuca]
          Length = 190

 Score = 87.7 bits (216), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 65/190 (34%), Gaps = 14/190 (7%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D
Sbjct: 1   QSIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATD 59

Query: 68  AFTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI----T 118
             T+ +RL+ +L  Y  +  R     + + +  +   ++         +IA         
Sbjct: 60  VQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKP 119

Query: 119 LVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
            + +          +  +  G+          +L       E +     +AM  A D   
Sbjct: 120 FICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDA 179

Query: 175 YTNHNIVLET 184
            +   +++  
Sbjct: 180 VSGMGVIVHI 189


>gi|221122142|ref|XP_002160822.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 202

 Score = 87.3 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 64/192 (33%), Gaps = 16/192 (8%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + ++ + ++ ++    V IA D +  +    +  +  K  ++G    + G +G + D  T
Sbjct: 1   MSINGSALVAMKGKNCVAIAADRRYGVQFQTIACDFEKTFQMGDKLFL-GLSGLATDIQT 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITLVI 121
           +  +++ +   Y  +  R          M   L          +              + 
Sbjct: 60  VRTKIKVRTNLYELRENRKISPKVFMTIMSNILYGRRFGPYFVEPLIAGLHPKTNEPYIA 119

Query: 122 TGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYT 176
           +    G   EPE+  +  G+ G        +L       E   E+  +A+  A D    +
Sbjct: 120 SCDLIGCPCEPED-FVVSGTCGDQLYGMCESLWEPDLEPEALFEVISQALLNAQDRDCLS 178

Query: 177 NHNIVLETLKVG 188
               V+  ++  
Sbjct: 179 GWGAVVHIIEKD 190


>gi|254570058|ref|XP_002492139.1| Beta 3 subunit of the 20S proteasome involved in
           ubiquitin-dependent catabolism [Pichia pastoris GS115]
 gi|238031936|emb|CAY69859.1| Beta 3 subunit of the 20S proteasome involved in
           ubiquitin-dependent catabolism [Pichia pastoris GS115]
 gi|328351376|emb|CCA37775.1| 20S proteasome subunit beta 3 [Pichia pastoris CBS 7435]
          Length = 205

 Score = 87.3 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 53/195 (27%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++  + + +     V IA D ++      +  N  KV + G   +  G  G + 
Sbjct: 1   MSNPASINGGSAVAMVGKDCVAIACDLRLGNQSLGVANNFEKVFQFGH--VFLGLTGLAT 58

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  +  R                  R   Y        + +    
Sbjct: 59  DVITLNETFRFKTNLYKMREERDIEPETFANLVSTSLYEKRFGPYFVGPIVAGINSKTNQ 118

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             + +      ++       +G+           L     S +++     +A+  A D  
Sbjct: 119 PFICSFDSIGCIDYSKDFAVVGTASDQLYGMCEGLYEPNLSPDDLFETISQALLNANDRD 178

Query: 174 VYTNHNIVLETLKVG 188
             +     +  +   
Sbjct: 179 ALSGWGAAVYIITKD 193


>gi|307190437|gb|EFN74473.1| Proteasome subunit beta type-6 [Camponotus floridanus]
          Length = 229

 Score = 87.3 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 67/196 (34%), Gaps = 11/196 (5%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +M D   + +   T+I+    DG VVI  D + + G  V    A K+ R+         +
Sbjct: 17  MMPDWLNSEQSTGTSIMACEFDGGVVIGADSRGTTGAYVSNRYADKLTRVTDYIYCC-RS 75

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI- 117
           GS+AD   + + +   L  +  +L    +              Y  +L A IL+A     
Sbjct: 76  GSAADTQAIADIVAYHLGLHQMELGTPPLVETAANVFREICYNYRDSLMAGILVAGWDKQ 135

Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
               V +     +     +   GSG +Y      A   +    +E   +    +++A   
Sbjct: 136 KGGQVYSIPIGGMCVRQPISIGGSGSTYVYGYVDAQYKSNMPKDECLKLVENTLALAMAR 195

Query: 173 CVYTNHNIVLETLKVG 188
              +   I    +   
Sbjct: 196 DGSSGGVIRTGVITEK 211


>gi|317034265|ref|XP_001396260.2| proteasome component PRE3 [Aspergillus niger CBS 513.88]
          Length = 232

 Score = 87.3 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 30  GTSIMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDV 127
           +   L  Y      +           +     + M+           K    V +     
Sbjct: 89  VSYHLNMYSITNNEAPSTQVAASLFQELCYENKDMLSAGIIIAGYDPKHGGQVYSIPLGG 148

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + EE     R A+  A      +   I L  
Sbjct: 149 SLHKQPFSIGGSGSTYIYGYCDAHWRENMTEEEGINFVRGALQEAIKWDGSSGGVIRLVV 208

Query: 185 LKV 187
           L  
Sbjct: 209 LTS 211


>gi|328770084|gb|EGF80126.1| hypothetical protein BATDEDRAFT_88542 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 204

 Score = 87.3 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 13/190 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ + + I+ +     V IA D +  +    +  + +K+  +     + G AG + D 
Sbjct: 2   SIMEYNGSAIIAMAGKNCVAIAADRRFGVQALTLGTDFQKIFPITDKTYL-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKD---------WRMDKYLRNLEAMILIADKTITL 119
            TL +R   K+  Y  +  R                  R   Y        L  D T  +
Sbjct: 61  TTLKDRFRYKVNMYHLEEEREISPKTFSHMVSSTQYEKRFGPYFVEPIVAGLEKDNTPFI 120

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYT 176
                   +      +  G+          +L       EE+     +A+  A D    +
Sbjct: 121 CSMDTIGCINFAKDFVVCGTASDQMNGMCESLWEPDLEPEELFEVISQALLNAIDRDAIS 180

Query: 177 NHNIVLETLK 186
               ++  + 
Sbjct: 181 GWGGIVHIIT 190


>gi|327304369|ref|XP_003236876.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
 gi|326459874|gb|EGD85327.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
          Length = 214

 Score = 87.3 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 56/199 (28%), Gaps = 14/199 (7%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           ++        ++    + +     V IA D ++ L    +     K+        + G  
Sbjct: 5   IVSIMSSPFDINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYL-GLT 63

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTI 117
           G + D  T+ + L  K+  Y  +  R+         +      K         ++A    
Sbjct: 64  GLATDVNTVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINH 123

Query: 118 ----TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIA 169
                 +        ++     +  G+          +L       E++     +A+  A
Sbjct: 124 TTGKPFICGFDSIGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNA 183

Query: 170 ADICVYTNHNIVLETLKVG 188
            D    +     +  ++  
Sbjct: 184 VDRDALSGWGAYVYIIEKD 202


>gi|326472712|gb|EGD96721.1| proteasome subunit beta type-3 [Trichophyton tonsurans CBS 112818]
 gi|326482041|gb|EGE06051.1| proteasome component PUP3 [Trichophyton equinum CBS 127.97]
          Length = 206

 Score = 87.3 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 54/195 (27%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ L    +     K+        + G  G + 
Sbjct: 1   MSSPFDINGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTI---- 117
           D  T+ + L  K+  Y  +  R+         +      K         ++A        
Sbjct: 60  DVNTVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGAYVYIIEKD 194


>gi|309807627|ref|ZP_07701571.1| putative ATP-dependent protease HslVU, peptidase subunit
           [Lactobacillus iners LactinV 01V1-a]
 gi|308169124|gb|EFO71198.1| putative ATP-dependent protease HslVU, peptidase subunit
           [Lactobacillus iners LactinV 01V1-a]
          Length = 114

 Score = 87.3 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 2/114 (1%)

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
            LE KLE Y   L RS+VE+A+ WR D  L  L+AM++  +    L+I+G G+VLEP+  
Sbjct: 1   MLEGKLETYSGDLRRSTVEMAQGWRKDPTLAKLQAMMIAFNDKDLLLISGNGEVLEPDED 60

Query: 134 VMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           V+AIGSGG+YA +AA A++       A +IA++A+ IAA I V+T+  I  + +
Sbjct: 61  VVAIGSGGNYAQAAALAMIRHSSDMDACDIAKEAVLIAAGIDVFTDDKITSDEI 114


>gi|50286241|ref|XP_445549.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524854|emb|CAG58460.1| unnamed protein product [Candida glabrata]
          Length = 215

 Score = 87.3 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDNIWCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMGDVL 128
           ++  L+ Y  Q        A +       +    L A I++A    K    V +      
Sbjct: 78  VQYYLDMYEGQFGEPDTYTAANMFKTLCYQNKDALTAGIIVAGYDEKNKGEVYSIPLGGS 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             +      GSG ++             S +E     + ++S A      +   I +  L
Sbjct: 138 IHKQPYAIAGSGSTFIYGYCDKNFRENMSKDETIDFIKHSLSQAIKWDGSSGGVIRMVVL 197

Query: 186 KVG 188
              
Sbjct: 198 TKD 200


>gi|170091950|ref|XP_001877197.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164648690|gb|EDR12933.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 234

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V+ +G VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 12  GTSIMAVQFEGGVVIGADSRTTTGSYIANRVTDKLTHVHDRIYCC-RSGSAADTQAVADI 70

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTI---TLVITGMGDV 127
           +   L+ +                  K     +    A I++A         V       
Sbjct: 71  VHYYLQMFTQTSGAPPSVHTAAALFQKLCYENKDALSAGIIVAGWDKDAGPSVYNIPVGG 130

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG +Y      A            E  R  +++A      +   I +  
Sbjct: 131 GMFRQPWAIGGSGSTYVYGYCDATYKEGWGREETVEFVRNTLALAMSRDGSSGGVIRMCV 190

Query: 185 LKVG 188
           +   
Sbjct: 191 ITED 194


>gi|50427419|ref|XP_462322.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
 gi|49657992|emb|CAG90828.1| DEHA2G17996p [Debaryomyces hansenii]
          Length = 242

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 70/216 (32%), Gaps = 30/216 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD +  +G ++      K+  +G   I    
Sbjct: 16  VPIEHRFNPYSDNGGTVLGIAGEDFSVLAGDTRQVVGYSINSRYEPKIFDVGDD-IAMTA 74

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIA-- 113
            G +AD   L++R   +L+ Y           +S+    +     K         LIA  
Sbjct: 75  NGFAADGAALIDRFRNQLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPYYVSTLIAGL 134

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----------------- 155
            D+    V +             A G+  S  +      ++ +                 
Sbjct: 135 DDEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQFVPGTNGTEKKELRY 194

Query: 156 NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
            S +E   + + A S A +  +Y    + +  +   
Sbjct: 195 LSLDEVLQLVKDAFSSATERHIYVGDGLEIFIITKD 230


>gi|3114276|pdb|1RYP|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114290|pdb|1RYP|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
          Length = 205

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 64/182 (35%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 9   GASIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAIADI 67

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMGDVL 128
           ++  LE Y +Q    S E A         +   NL A I++A   DK    V T      
Sbjct: 68  VQYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGS 127

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETL 185
             +      GSG ++             S EE     + ++S A      +   I +  L
Sbjct: 128 VHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVL 187

Query: 186 KV 187
             
Sbjct: 188 TA 189


>gi|254571735|ref|XP_002492977.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
           after acidic residues in peptides [Pichia pastoris
           GS115]
 gi|238032775|emb|CAY70798.1| Beta 1 subunit of the 20S proteasome, responsible for cleavage
           after acidic residues in peptides [Pichia pastoris
           GS115]
 gi|328353009|emb|CCA39407.1| 20S proteasome subunit beta 1 [Pichia pastoris CBS 7435]
          Length = 216

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 8/156 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V+ DG V++  D + + G  +      K+ ++  G +    +GS+AD   + + 
Sbjct: 19  GTSIMAVKFDGGVILGADSRTTTGAYIANRVTDKLTQV-HGTVWCCRSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIA---DKTITLVITGMGDV 127
           ++  LE Y  Q                        L A I+ A   DK    + +     
Sbjct: 78  VKYHLELYEAQHGAPPTTKIAASLFQELCYNNKDALTAGIICAGYDDKEKGAIYSIPIGG 137

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
              +      GSG ++          +  + +E   
Sbjct: 138 SIHKQEYAIAGSGSTFIYGYCNKNFKSNMTRDETVE 173


>gi|156387836|ref|XP_001634408.1| predicted protein [Nematostella vectensis]
 gi|156221491|gb|EDO42345.1| predicted protein [Nematostella vectensis]
          Length = 197

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 59/178 (33%), Gaps = 11/178 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V  +G VVI  D + + G  V      K+  + +       +GS+AD   + + ++  
Sbjct: 1   MAVEFNGGVVIGADSRTTTGSYVANRVTDKLTPVTERIFCC-RSGSAADTQAIADIVKYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTI---TLVITGMGDVLEPE 131
           L  +  ++    +         +          A I+ A         V +     +   
Sbjct: 60  LNFHSIEMEEPVLVKTAANLFREMCYGYRDQLSAGIICAGWDKLNGGQVYSIPLGGMCIR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLK 186
                 GSG +Y      A   +  S EE     + A+++A      +   I +  + 
Sbjct: 120 QPFTIGGSGSTYIYGHCDATYKSGMSKEECFNFVKTAVALAMSRDGSSGGIIRMAGID 177


>gi|154308434|ref|XP_001553553.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150852818|gb|EDN28010.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 229

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 29  GTSIMAVNFKDGVILGADSRTTTGSYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDV 127
           +  +L  Y     ++                    L A ++IA         V +     
Sbjct: 88  VHYQLGMYGALNGKTPTTQTAAAMFQELCYDNKDQLSAGLIIAGWDERHGGQVYSIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A          A +  + A+  A      +   I +  
Sbjct: 148 SLHKQSYAIGGSGSTYIYGYCDANWKEGMEEADAVDFVKGALQEAIKWDGSSGGVIRMVV 207

Query: 185 LKVG 188
           L   
Sbjct: 208 LTAK 211


>gi|312070446|ref|XP_003138150.1| proteasome A-type and B-type family protein [Loa loa]
 gi|307766687|gb|EFO25921.1| proteasome A-type and B-type family protein [Loa loa]
          Length = 223

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 11/177 (6%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +  DG VV+  D + S G  +      K+  +    ++   +GS+AD   + + ++  +E
Sbjct: 1   MEFDGGVVVGTDSRTSSGSYISSRATDKITPVTNRMVVC-RSGSAADTQAISDIVKYYIE 59

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMI-------LIADKTITLVITGMGDVLEPENG 133
            Y                   +L      +          D     +             
Sbjct: 60  VYSMMEEEDVTVGRSAQIFRNFLYKYRDSLSASVLVAGYDDVEGGQLYAIPLGGYVTRQR 119

Query: 134 VMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKV 187
             A GSG ++      +   +  +AE   EI   A+++A      +   I L  +  
Sbjct: 120 CAASGSGSTFVQGFLDSQWKSGMTAEKCKEIVLNAVALATIRDGSSGGVIRLAVIDK 176


>gi|322370361|ref|ZP_08044920.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
           paucihalophilus DX253]
 gi|320550069|gb|EFW91724.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
           paucihalophilus DX253]
          Length = 240

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 57/173 (32%), Gaps = 10/173 (5%)

Query: 25  GVVVIAGDGQVS-LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
             VV+A D + S  G+ V   N +KV ++     +   AGS   A + +  +  +   Y 
Sbjct: 55  DGVVMATDMRASLAGRFVSNKNVQKVEQIHPTAAL-TMAGSVGGAQSFIRTMRIESNLYE 113

Query: 84  NQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVLEPENGVMAIG 138
           ++        A        LR     ++       D+  + + +         +     G
Sbjct: 114 SRRGEQMSMQALSTLAGNMLRGGPFFMVSPILGGIDEEGSHIYSLDPAGGVMSDDYTVTG 173

Query: 139 SGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           SG   A            S EE   +A + +  A +    + + + L  +   
Sbjct: 174 SGMQLAYGVLEQDYEEGLSNEEAKMVAARGIKSAVERDTGSGNGVFLAEITEE 226


>gi|312210177|emb|CBX90264.1| similar to proteasome subunit beta type-6 precursor [Leptosphaeria
           maculans]
          Length = 228

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++A D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 27  GTSIMAINFKDGVILAADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 85

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           ++  L  Y                           L A ++IA         V +     
Sbjct: 86  VQYHLGMYGATNDEPPTTQTAAAIFQELCYSNKDQLSAGLIIAGWDHRHGGQVYSIPLGG 145

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      S EE     + A++ A      +   I +  
Sbjct: 146 SLHKQAYAIGGSGSTYIYGYCDANWRENMSEEEGIKFVKGALAEAIKWDGSSGGVIRMVV 205

Query: 185 LK 186
           L 
Sbjct: 206 LT 207


>gi|212536802|ref|XP_002148557.1| proteasome component Pre3, putative [Penicillium marneffei ATCC
           18224]
 gi|210070956|gb|EEA25046.1| proteasome component Pre3, putative [Penicillium marneffei ATCC
           18224]
          Length = 231

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 29  GTSIMAINFKDGVILGADSRTTTGSYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDV 127
           +   L  Y                           L A I+IA         V +     
Sbjct: 88  VSYHLNMYGIVNDEPPSTQTAAALFQELCYDNKDQLSAGIIIAGYDRRHGGQVYSIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + EE     + A+  A      +   I +  
Sbjct: 148 SLHKQAYAIGGSGSTYIYGYCDANWKEGMTEEEGVNFVKSALGEAIKWDGSSGGVIRMVV 207

Query: 185 LKVG 188
           L   
Sbjct: 208 LTAK 211


>gi|239788580|dbj|BAH70963.1| ACYPI007526 [Acyrthosiphon pisum]
          Length = 205

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  +  KV ++       GF G + D 
Sbjct: 2   SIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTY-MGFPGLATDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVI 121
           FT+ E++  +   Y  +  R     A    +   L            MI+  D+      
Sbjct: 61  FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120

Query: 122 TGMGDVLEP---ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
               D++      +  +  G+  S       AL       +++     +A+  A +    
Sbjct: 121 MCDMDLIGCVNKSDNFVVGGTSSSQLYGLCEALWEPDMEEDQLFETISQALVSACNRDAI 180

Query: 176 TNHNIVLETLKVG 188
           +     +  +K  
Sbjct: 181 SGWGAKVYIIKKD 193


>gi|11513426|pdb|1G65|N Chain N, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513440|pdb|1G65|2 Chain 2, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11514005|pdb|1G0U|N Chain N, A Gated Channel Into The Proteasome Core Particle
 gi|11514019|pdb|1G0U|2 Chain 2, A Gated Channel Into The Proteasome Core Particle
 gi|14488812|pdb|1FNT|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488826|pdb|1FNT|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|20150390|pdb|1JD2|N Chain N, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150397|pdb|1JD2|U Chain U, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|75765706|pdb|1Z7Q|H Chain H, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765720|pdb|1Z7Q|V Chain V, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|93279381|pdb|2F16|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279395|pdb|2F16|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279669|pdb|2FNY|N Chain N, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279683|pdb|2FNY|2 Chain 2, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032215|pdb|2FAK|N Chain N, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032229|pdb|2FAK|2 Chain 2, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490856|pdb|2GPL|N Chain N, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490870|pdb|2GPL|2 Chain 2, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|178847473|pdb|2ZCY|N Chain N, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847487|pdb|2ZCY|1 Chain 1, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847515|pdb|3BDM|N Chain N, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847529|pdb|3BDM|1 Chain 1, Yeast 20s Proteasome:glidobactin A-Complex
 gi|190016380|pdb|3D29|N Chain N, Proteasome Inhibition By Fellutamide B
 gi|190016394|pdb|3D29|2 Chain 2, Proteasome Inhibition By Fellutamide B
 gi|197725334|pdb|3E47|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725348|pdb|3E47|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939225|pdb|3DY3|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939239|pdb|3DY3|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939253|pdb|3DY4|N Chain N, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939267|pdb|3DY4|2 Chain 2, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828250|pdb|3GPJ|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828264|pdb|3GPJ|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588334|pdb|3GPT|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588348|pdb|3GPT|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588362|pdb|3GPW|N Chain N, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588376|pdb|3GPW|2 Chain 2, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588556|pdb|3HYE|N Chain N, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588570|pdb|3HYE|2 Chain 2, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|330689394|pdb|3MG4|N Chain N, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689408|pdb|3MG4|2 Chain 2, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 196

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 10/181 (5%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + +
Sbjct: 1   TSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAIADIV 59

Query: 76  EKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMGDVLE 129
           +  LE Y +Q    S E A         +   NL A I++A   DK    V T       
Sbjct: 60  QYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSV 119

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETLK 186
            +      GSG ++             S EE     + ++S A      +   I +  L 
Sbjct: 120 HKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLT 179

Query: 187 V 187
            
Sbjct: 180 A 180


>gi|68065946|ref|XP_674957.1| proteasome subunit beta type 1 [Plasmodium berghei strain ANKA]
 gi|56493858|emb|CAI00630.1| proteasome subunit beta type 1, putative [Plasmodium berghei]
          Length = 267

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 72/226 (31%), Gaps = 45/226 (19%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
             +      +  T++ +  +  V++AGD ++SL  ++   N  K+ ++     I G +G 
Sbjct: 29  SKRWNPYIDNGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITD-KCIIGSSGM 87

Query: 65  SADAFTLLERLEKKLEQY---------------------------PNQLLRSSVELAKDW 97
            +D  TL   L+  L+ +                            +    S   +AK  
Sbjct: 88  QSDIKTLHSLLQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLL 147

Query: 98  RMDKYLRNLEAM-----ILIADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARAL 151
            +  Y R          +   D+     + +        ++     GSG S  L      
Sbjct: 148 CVTLYSRRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNR 207

Query: 152 MS------TQNS---AEEI--ARKAMSIAADICVYTNHNIVLETLK 186
           +               ++I   + AM+ A +  +YT     +  + 
Sbjct: 208 VEQKNQLIKNMDFNLRDDINFVKDAMTSATERDIYTGDKAEIYIID 253


>gi|300121066|emb|CBK21448.2| unnamed protein product [Blastocystis hominis]
          Length = 230

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 21/194 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     V++  D + S G  V      K+ ++     +   +GS+AD   +   
Sbjct: 14  GTTIIAIALGDCVIMGADSRSSAGSYVANRITNKIEQIDDRIFMC-RSGSAADTQKIGNI 72

Query: 75  LEKKLEQ--------------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKTI 117
           + + L+               Y    +  +        + KY   L+A I+IA   D   
Sbjct: 73  IRQNLDFFKYICFYLLIARTTYGMNPIVRNAATLGHKIIYKYKDQLQAGIIIAGIDDVDG 132

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICV 174
             +             V   GSG +Y      +  +   S E   E  R+A+ +A     
Sbjct: 133 ASIYEITLGGSMLRVNVALGGSGSTYIYGFVDSNYNPNMSVEEGVEFVRRAVQLAISRDG 192

Query: 175 YTNHNIVLETLKVG 188
           ++   +    ++  
Sbjct: 193 HSGGVVRTVVIRRD 206


>gi|83769195|dbj|BAE59332.1| unnamed protein product [Aspergillus oryzae]
          Length = 203

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 55/188 (29%), Gaps = 14/188 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +    + +     V IA D ++ +    +  N  K+        + G  G + D  T+ +
Sbjct: 5   NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFL-GLTGLATDVSTVSD 63

Query: 74  RLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTITLVITGM 124
               K+  Y  +  R  +   LA       Y R             + +      +    
Sbjct: 64  LFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFICGFD 123

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNI 180
               ++     +  G+          +L     + E++     +A+  A D    +    
Sbjct: 124 SIGCIDFAKDFIVSGTASDQLFGTCESLWEPDLAPEDLFETISQALLSAVDRDALSGWGA 183

Query: 181 VLETLKVG 188
            +  ++  
Sbjct: 184 QVYIIEKD 191


>gi|46397057|sp|Q9U794|PSB1_TRYBB RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
           proteasome subunit beta-6
 gi|6224687|gb|AAF05905.1|AF148124_1 20S proteasome beta 6 subunit [Trypanosoma brucei brucei]
 gi|261329654|emb|CBH12636.1| 20S proteasome beta 6 subunit, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 258

 Score = 86.6 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 21/201 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  TI  +     VV+  D +++    +   +           I    +G  AD 
Sbjct: 46  SPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADR 105

Query: 69  FTLLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEA-----MILIADKTITLV 120
             L + L+ +++ Y         S+  +AK      Y R         MI+  D+    V
Sbjct: 106 LQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGV 165

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMST---------QNSAEE---IARKAMS 167
             +               GS  S+       L++            + EE   + + A +
Sbjct: 166 CYSYDPVGSTEPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFT 225

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  ++T   +    +   
Sbjct: 226 GAAERDIFTGDTVCFHIITAD 246


>gi|328715258|ref|XP_001950836.2| PREDICTED: proteasome subunit beta type-3-like [Acyrthosiphon
           pisum]
          Length = 205

 Score = 86.6 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  +  KV ++       GF G + D 
Sbjct: 2   SIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTY-MGFPGLATDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVI 121
           FT+ E++  +   Y  +  R     A    +   L            MI+  D+      
Sbjct: 61  FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120

Query: 122 TGMGDVLEP---ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
               D++      +  +  G+  S       AL       +++     +A+  A +    
Sbjct: 121 MCDMDLIGCVNKSDNFVVGGTSSSQLYGLCEALWEPDMEEDQLFETISQALVSACNRDAI 180

Query: 176 TNHNIVLETLKVG 188
           +     +  +K  
Sbjct: 181 SGWGAKVYIIKKD 193


>gi|254578806|ref|XP_002495389.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
 gi|238938279|emb|CAR26456.1| ZYRO0B10142p [Zygosaccharomyces rouxii]
          Length = 215

 Score = 86.6 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + ++G  V      K+ R+         +GS+AD   + + 
Sbjct: 19  GTSIMAVSFKDGVILGADSRTTMGPYVANRVTDKLTRVHDKVWCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMGDVL 128
           ++  L+ Y  Q    S   A         +    L A I++A    K    V +      
Sbjct: 78  VQYYLDLYTAQYGEPSTRTAAAIFQQLCYENKDALTAGIIVAGYDEKNQGEVYSIPIGGS 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETL 185
             +      GSG ++             + +E     + ++S A      +   I +  L
Sbjct: 138 LHKQKYAIAGSGSTFIYGYCDKNYKDGMTKDETVDFIKHSLSQAIKWDGSSGGVIRMVVL 197

Query: 186 KVG 188
              
Sbjct: 198 TKN 200


>gi|94469190|gb|ABF18444.1| proteasome subunit beta type 6 precursor-like protein [Aedes
           aegypti]
          Length = 228

 Score = 86.6 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 14/179 (7%)

Query: 4   MGDKHYAVKMH---ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M   +   K H    TTI+ V  DG VVI  D + S G  V      K+ +L    I   
Sbjct: 3   MDYSNDWRKAHHSTGTTIMAVEFDGGVVIGADSRTSTGTYVANRVTDKLTKLTD-KIYCC 61

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +GS+AD   + + +   L  + NQ     +         +Y  N    ++         
Sbjct: 62  RSGSAADTQAIADIVAYSLNYHENQTGEEPLVADAACEFRQYCYNYRDSLMAGIIVAGFD 121

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
           +K    V +     ++    V   GSG SY     +             E  +KA+  A
Sbjct: 122 NKNGGQVYSVPVGGMQIRQSVTIGGSGSSYIYGFVKEHYREGMPQDECVEFVKKAVFHA 180


>gi|240849169|ref|NP_001155482.1| proteasome beta 3 subunit-like [Acyrthosiphon pisum]
 gi|239792821|dbj|BAH72708.1| ACYPI002587 [Acyrthosiphon pisum]
          Length = 205

 Score = 86.6 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  +  KV ++       GF G + D 
Sbjct: 2   SIMDYNGGALIGMKGKDCVAIATDKRFGIQAQTVSLDFTKVFQINPHTF-MGFPGLATDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVI 121
           FT+ E++  +   Y  +  R     A    +   L            MI+  D+      
Sbjct: 61  FTVYEKIMFRKRLYELKENRKISPKALASLVSNLLYENRFSPFFVEPMIVALDEVTLEPY 120

Query: 122 TGMGDVLEP---ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
               D++      +  +  G+  S       AL       +++     +A+  A +    
Sbjct: 121 MCDMDLIGCVNKSDNFVVGGTSSSQLYGLCEALWEPDMEEDQLFETISQALVSACNRDAI 180

Query: 176 TNHNIVLETLKVG 188
           +     +  +K  
Sbjct: 181 SGWGAKVYIIKKD 193


>gi|299470598|emb|CBN80220.1| proteasome subunit beta type 6 [Ectocarpus siliculosus]
          Length = 241

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 65/184 (35%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           ATT++  R DG VVI  D + S G  V  +   K+  +  G  +A  +GSSAD   +   
Sbjct: 22  ATTLVAARFDGGVVIGADSRTSQGSFVANSGTDKITPVSPGVFLA-RSGSSADTQFVAGV 80

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +E KLE Y  +  R     A               L A I+ A         V +     
Sbjct: 81  IEAKLEAYRTEFGRYPTVRAAATATRNLCYANKDQLSAGIICAGWDSREGGSVFSVPQGG 140

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
              E      GSG  YAL      +      +E     R A+ +A      +   I L  
Sbjct: 141 SLLEQPFAVSGSGAVYALGYCDDNLRPGLGRDECVSHVRTALEMAVRRDGASGGVIRLCV 200

Query: 185 LKVG 188
           +   
Sbjct: 201 VSAD 204


>gi|255711280|ref|XP_002551923.1| KLTH0B03102p [Lachancea thermotolerans]
 gi|238933301|emb|CAR21485.1| KLTH0B03102p [Lachancea thermotolerans]
          Length = 215

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ R+ +       +GS+AD   + + 
Sbjct: 19  GTSIMAVTFRDGVILGADSRTTTGAYIANRVTDKLTRVHEKVWCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMGDVL 128
           ++  LE Y  Q    S + A         +   NL A I++A    K    V +      
Sbjct: 78  VQHYLELYTAQFGEPSTKTAASIFKTLCYENKDNLTAGIIVAGYDEKNKGEVYSIPLGGS 137

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETL 185
             +      GSG ++             S +E     + ++S A      +   I +  L
Sbjct: 138 VHKQKYAIAGSGSTFIYGYCDKNYKENMSKDETVSFMKNSLSQAIKWDGSSGGVIRMVVL 197

Query: 186 KVG 188
              
Sbjct: 198 TKD 200


>gi|126274560|ref|XP_001387579.1| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|126213449|gb|EAZ63556.1| predicted protein [Pichia stipitis CBS 6054]
          Length = 242

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 64/216 (29%), Gaps = 30/216 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD +   G ++      KV  +G   +    
Sbjct: 16  VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYQPKVFNVGDDIV-MTA 74

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADK 115
            G +AD   L++R + +L+ Y           +S+    +     K         LIA  
Sbjct: 75  NGFAADGAALIDRFKNQLQWYKFDHGGKKLNIKSAARYIQHLLYGKRFFPYYVSTLIAGL 134

Query: 116 TITL---VITGMGDVLEPENGVMAIGSGGSYALSAAR--------------------ALM 152
                  V +             A G+  S  +                           
Sbjct: 135 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGSDGKKKRELRY 194

Query: 153 STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            T +   E+ R A S A +  +     + +  +   
Sbjct: 195 LTLDEVLELVRDAFSSATERHIQVGDGLEILIVTKE 230


>gi|74220487|dbj|BAE31463.1| unnamed protein product [Mus musculus]
          Length = 219

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 10/182 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G  V+     K+  L +    A  +GS+ADA  + + 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQHIFCA-LSGSAADAQAIADM 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              +LE +  +L    + LA    +          +L        D+     + G    +
Sbjct: 79  AAYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQCEGGQVYGTMGGM 138

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
                     SG SY      A      + E+  R    A+++A +    +   I L T+
Sbjct: 139 LIRQPFTIGDSGSSYIYGYVDAAYKPGMTPEDCRRFTTDAITLAMNRDGSSGGVIYLVTI 198

Query: 186 KV 187
             
Sbjct: 199 TA 200


>gi|332375660|gb|AEE62971.1| unknown [Dendroctonus ponderosae]
          Length = 205

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 61/193 (31%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   +L ++ +  V IA D +  +    +  N  K+  +G    + G  G + D 
Sbjct: 2   SILTYNGGAMLAMKGENCVAIAADRRFGVQAQTLATNFEKIFEMGSHLYV-GLPGLATDT 60

Query: 69  FTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTITL 119
            T++E+L  +   Y  +  R+            L  + R   Y        L        
Sbjct: 61  QTVMEKLRFRKNIYELKENRAMSPRVFSAMVSHLLYENRFGPYFVEPVVAGLEPKTFEPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           +        +      +  G+  +       AL     + +E+     +A+  A D    
Sbjct: 121 ICNMDLIGCINQPKDFVVGGTASAQLYGMCEALWEPNLTPDELFETTSQALINAFDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +     +  ++  
Sbjct: 181 SGWGATVYIIEKD 193


>gi|330914049|ref|XP_003296474.1| hypothetical protein PTT_06586 [Pyrenophora teres f. teres 0-1]
 gi|311331358|gb|EFQ95438.1| hypothetical protein PTT_06586 [Pyrenophora teres f. teres 0-1]
          Length = 227

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++A D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 26  GTSIMAINFKDGVILAADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 84

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           +   L  Y                           L A ++IA         V +     
Sbjct: 85  VHYHLGMYGTTNDEPPTTQTAAAIFQELCYSNKDQLSAGLIIAGWDHRHGGQVYSIPLGG 144

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      S EE     + A+S A      +   I +  
Sbjct: 145 SLHKQSYAIGGSGSTYIYGYCDANWREGMSEEEGIKFVKGALSEAIKWDGSSGGVIRMVV 204

Query: 185 LKVG 188
           L   
Sbjct: 205 LTGK 208


>gi|157113425|ref|XP_001657823.1| proteasome subunit beta type 6,9 [Aedes aegypti]
 gi|108877753|gb|EAT41978.1| proteasome subunit beta type 6,9 [Aedes aegypti]
          Length = 228

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 14/179 (7%)

Query: 4   MGDKHYAVKMH---ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M   +   K H    TTI+ V  DG VVI  D + S G  V      K+ +L    I   
Sbjct: 3   MDYSNDWRKAHHSTGTTIMAVEFDGGVVIGADSRTSTGTYVANRVTDKLTKLTD-KIYCC 61

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +GS+AD   + + +   L  + NQ     +         +Y  N    ++         
Sbjct: 62  RSGSAADTQAIADIVAYSLNYHENQTGEEPLVADAACEFRQYCYNYRDSLMAGIIVAGFD 121

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
           +K    V +     ++    V   GSG SY     +             E  +KA+  A
Sbjct: 122 NKNGGQVYSVPVGGMQIRQSVTIGGSGSSYIYGFVKEHYREGMPKDECVEFVKKAVFHA 180


>gi|326426453|gb|EGD72023.1| proteasome subunit beta type-3 [Salpingoeca sp. ATCC 50818]
          Length = 204

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 65/193 (33%), Gaps = 15/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ + + ++ +     V IA D ++      +  + +KV ++G   +  G  G   DA
Sbjct: 2   SIMEYNGSAVVAMTGKECVAIAADRRLGAQAQTVSTDFQKVFQMGP-KLFVGLPGLGTDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
            T+ +RL+ +L  Y  +  R          +  +L                   K    V
Sbjct: 61  ITVSQRLKFRLNMYTLREERDIEPKTMINLVSSFLYERRFGPYFVEPVVAGLDSKNQPYV 120

Query: 121 ITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
            +    G  +E  +  +  G+          +L     + +++     +A+  A D    
Sbjct: 121 ASTDLIGCPMETSD-FVVGGTSSEQLYGMCESLYKPDMAPDDLFETISQALMNAVDRDCL 179

Query: 176 TNHNIVLETLKVG 188
                ++  ++  
Sbjct: 180 AGWGAIVHIIEKD 192


>gi|197128391|gb|ACH44889.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
          Length = 205

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 20/191 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +   +L +R  G V IA D +  +    +  + +++  +G+  ++   AG + D  ++ +
Sbjct: 7   NGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLG-LAGLATDVQSVAQ 65

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           RL+ +L  Y  +  R          +   L         A     ++       LEP   
Sbjct: 66  RLKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYA---EPVIAGLDPVSLEPFIC 122

Query: 134 -------------VMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
                         +  G+          +L       E +     +AM  A D    + 
Sbjct: 123 SLDLIGCPMVTQDFVLSGTCSEQMYGMCESLWEPDMEPEHLFETISQAMLNAVDRDAISG 182

Query: 178 HNIVLETLKVG 188
             +V+  ++  
Sbjct: 183 MGVVVHVIEKD 193


>gi|47216873|emb|CAG11680.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 214

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG  V+  D +VS G+ V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 16  GTTIIAVEFDGGAVLGSDSRVSAGKAVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEI 74

Query: 75  LEKKLEQYPNQLLRSSVELAK--DWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEP 130
           +  +L+ + +         A        KY   L A +++A  D+     +    + L  
Sbjct: 75  VNYQLDVHRSARTPKVGSAASLVKNISYKYKEELSAHLIVAGWDRRKGGQVFATLNGLLA 134

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARK-----AMSIAADICVYTNHNIVLETL 185
                  GSG SY      A      S +E A++     A+++A +    +     + T+
Sbjct: 135 RQPFAVGGSGSSYVYGFVDAEFRRGMSKQE-AQQAGSSTALALAMNRDGSSGGVAYVVTI 193

Query: 186 KVG 188
              
Sbjct: 194 DEN 196


>gi|15530232|gb|AAH13897.1| Proteasome (prosome, macropain) subunit, beta type 6 [Mus musculus]
          Length = 202

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 58/178 (32%), Gaps = 11/178 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+ +G VV+  D + + G  +      K+  +         +GS+AD   + + +  +
Sbjct: 1   MAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCC-RSGSAADTQAVADAVTYQ 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPE 131
           L  +  +L    +         +        ++          +    V +     +   
Sbjct: 60  LGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLK 186
                 GS  SY      A      + +E  +    A+++A +    +   I L  ++
Sbjct: 120 QSFAIGGSRSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQ 177


>gi|66358224|ref|XP_626290.1| possible proteasome component [Cryptosporidium parvum Iowa II]
 gi|46228012|gb|EAK88932.1| possible proteasome component [Cryptosporidium parvum Iowa II]
          Length = 204

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 14/182 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             +  +   IL ++    V  A D ++ S G   +  +  KV R      + GF+G + D
Sbjct: 1   SIMTYNGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIR-PSSKTLMGFSGLATD 59

Query: 68  AFTLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA---DKTITL 119
             TL   ++ K   Y  +  R     +   +       K         ++A   +  +  
Sbjct: 60  IHTLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPF 119

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVY 175
           +        L   +     G+  +       +        +   EI  + M    D   +
Sbjct: 120 IAGYDLIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAF 179

Query: 176 TN 177
           + 
Sbjct: 180 SG 181


>gi|62122594|dbj|BAD93262.1| PSMB9-like [Oryzias latipes]
          Length = 217

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 12/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL    D  VVI  D + S+ G+ V      KV ++         AGS ADA  + +
Sbjct: 16  GTTILAAVFDRGVVIGSDSRASIGGEYVSSKTINKVIQVHDRIFCC-MAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + +L  +  Q+    + ++               L+A  + A         V      
Sbjct: 75  TAKFQLSFHSIQMESPPLVISAASVLKQLCYNNKEELQAGFITAGWDKKKGPQVYVVSLG 134

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLE 183
            +     V   GSG +Y      A      + EE    A  A+++A      +     L 
Sbjct: 135 GMMISQPVTIGGSGSTYIYGYVDAKYKVNMTREECLQFATNALALAMGRDNVSGGVANLV 194

Query: 184 TLK 186
            + 
Sbjct: 195 VIT 197


>gi|52547778|gb|AAU81924.1| low molecular mass protein 2 [Marmota monax]
          Length = 192

 Score = 86.6 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 10/181 (5%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ V  DG VV+  D +VS G+ V+     K+  L      A  +GS+ADA  + +  
Sbjct: 1   TTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHHRIYCA-LSGSAADAQAVADMA 59

Query: 76  EKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVLE 129
             +LE +  +L    + LA          KY  +L A +++A  D+     + G    + 
Sbjct: 60  AYQLELHGLELEEPPLVLAAANVIRNITYKYREDLSAHLMVAGWDQREGGQVYGTLGGML 119

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLK 186
                   GSG +Y      A      + EE  R    A+++A +    +   I L T+ 
Sbjct: 120 TRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTVT 179

Query: 187 V 187
            
Sbjct: 180 A 180


>gi|302828808|ref|XP_002945971.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
           nagariensis]
 gi|300268786|gb|EFJ52966.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
           nagariensis]
          Length = 223

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 56/183 (30%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  +G V++  D + S G  V      K+  L    +    +GS+AD   +   
Sbjct: 15  GTSIIAVTFNGGVILGADSRTSTGNYVANRVTDKITPLCDN-VYTLRSGSAADTQAIAGY 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE--- 131
           ++  + Q+  +             +     N + ++            G G V       
Sbjct: 74  VQHFIAQHQAEEGDHVTVKTAANLVKMMAYNNKDIMQAGLIVAGFDKYGGGQVYSISLGG 133

Query: 132 ----NGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
                     GSG +Y             S EE      +A+  A      +   I   T
Sbjct: 134 TITATPFSMSGSGSTYINGFCDKYWRENMSEEEAMDFVTRALRYAMTWDASSGGCIRTVT 193

Query: 185 LKV 187
           +  
Sbjct: 194 ITA 196


>gi|221131800|ref|XP_002167313.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 205

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 16/192 (8%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + ++ + ++ ++    V IA D +  +    +  +  K  ++G    + G +G + D  T
Sbjct: 4   MSINGSALVAMKGKNCVAIAADRRYGVQFQTIACDFEKTFQMGDKLFL-GLSGLATDIQT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITLVI 121
           +    + +   Y  +  R          M   L          +              + 
Sbjct: 63  VSNLAKFRTNLYELRENRKISPKVFMTIMSNILYGRRFGPYFVEPLIAGLHPKTNEPYIA 122

Query: 122 TGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYT 176
           +    G   EPE+  +  G+ G        +L       E   E+  +A+  A D    +
Sbjct: 123 SCDLIGCPCEPED-FVVSGTCGDQLYGMCESLWEPDLEPEALFEVISQALLNAQDRDCLS 181

Query: 177 NHNIVLETLKVG 188
               V+  ++  
Sbjct: 182 GWGAVVHIIEKD 193


>gi|195021581|ref|XP_001985423.1| GH17051 [Drosophila grimshawi]
 gi|193898905|gb|EDV97771.1| GH17051 [Drosophila grimshawi]
          Length = 299

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 72/192 (37%), Gaps = 11/192 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
              ++ M    I+ +     V++  +   ++   V+     K+ RL       G +GS++
Sbjct: 16  SESSMTMSNGIIVAIHYKNGVMLGAEKTATINGVVISRTCPKIFRLHNNIYCGG-SGSAS 74

Query: 67  DAFTLLERLEKKLE-QYPNQLLRSSVELAKDWRMDKYLRNLEA------MILIADKTITL 119
           D   +   +E +L+  +     R    ++    + K L +  A      +I+  D+    
Sbjct: 75  DISNVTRSIESQLQVLHQRISQRRVPVVSAKKLLKKTLMHGFAKVLASFIIIGVDRLGMH 134

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYT 176
           + +   D         AIG G   A++           +N A ++   A++ A  I   +
Sbjct: 135 LYSLHCDGTSEYILFNAIGLGRFAAMAILENRWHLDIDENDARDLIIDAINAAFSIGGSS 194

Query: 177 NHNIVLETLKVG 188
            +NI L  ++  
Sbjct: 195 GYNIDLCIIRKD 206


>gi|270008657|gb|EFA05105.1| hypothetical protein TcasGA2_TC015205 [Tribolium castaneum]
          Length = 205

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 61/196 (31%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++ D  V IA D +  +    +  N +K+  +G    + G  G + D 
Sbjct: 2   SILAYNGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYV-GLPGLATDT 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T++E+L  +   Y  +  R          +   L               +V        
Sbjct: 61  QTVMEKLRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFV---EPIVAGLDPGTY 117

Query: 129 EP-------------ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP              N  +  G+  S       +L       +++     +A+  A D 
Sbjct: 118 EPYICNMDLIGCPNQPNDFVVGGTASSQLFGMCESLWEPNLGPDDLFETTSQALINAFDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +    V+  ++  
Sbjct: 178 DAISGWGAVVYIIEKD 193


>gi|19115641|ref|NP_594729.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe 972h-]
 gi|17380232|sp|Q9UQY2|PSB1_SCHPO RecName: Full=Probable proteasome subunit beta type-1
 gi|5734483|emb|CAB52716.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe]
 gi|6681370|dbj|BAA88692.1| catalytic subunit (C5) of proteasome [Schizosaccharomyces pombe]
          Length = 225

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 74/214 (34%), Gaps = 29/214 (13%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           +   +      +  T + +  DG  ++AGD +   G  +      +V  +G   +I G +
Sbjct: 1   MSQSQFDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVI-GAS 59

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMILI-----ADK 115
           G  ADA  L++R++++++ Y +   R  S+   A   R   Y +      +       DK
Sbjct: 60  GFEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDK 119

Query: 116 TITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN------------------ 156
                + +             A GS  ++        ++  N                  
Sbjct: 120 EGKGEIYSFDPVGSYEREWCRAGGSAANFITPFLDNQVNLHNQYVPGSHGKERKPRRLLK 179

Query: 157 --SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
              A +I   A + A +  +    +++++ +   
Sbjct: 180 LEEAMKITTDAFTSAGERHIEVGDSVLVKIITKE 213


>gi|76802374|ref|YP_327382.1| proteasome beta subunit [Natronomonas pharaonis DSM 2160]
 gi|121698246|sp|Q3IPX1|PSB_NATPD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|76558239|emb|CAI49827.1| proteasome beta subunit [Natronomonas pharaonis DSM 2160]
          Length = 239

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 10/173 (5%)

Query: 26  VVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN 84
            VVIA D + SLG   V   N +KV ++     +    GS   A + +  L  +++ Y  
Sbjct: 55  GVVIATDMRASLGGRFVSNKNVQKVEQIHPSAAL-TLVGSVGGAQSFIRSLRAEVDLYEA 113

Query: 85  QLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVLEPENGVMAIGS 139
           +        A       + R      +       D     V +        ++     GS
Sbjct: 114 RRGEDISINALATLAGNFARGGPFFAINPILGGVDDEGHHVYSIDPAGGVMKDDYTVTGS 173

Query: 140 GGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           G + A            +   A+ +A   +  A +    + + + L T+   D
Sbjct: 174 GLTVAYGTLEREYEDDMTNEEAKRVAASGIKAAVERDTGSGNGVFLATVTDED 226


>gi|224014869|ref|XP_002297096.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968215|gb|EED86564.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 204

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 61/204 (29%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +   I+ +     V IA D ++ +    +  + +K+ ++    +  G AG ++D 
Sbjct: 2   SILEYNGAAIIAMSGKDCVGIASDNRMGISYQTVSMDFKKIFQM-NEKLFVGLAGLASDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
            TL + L  ++  Y  +  R          +   L         A        +     +
Sbjct: 61  QTLDQLLRFRMNLYELREEREMTPKVFTNLLSNMLYEKRFGPYFAEPVVAGLDENDKPYL 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--- 173
            T             +  G+           L       EE+     +A+  + D     
Sbjct: 121 ATMDLIGATSSTEDFVVAGTCAGNLYGMCETLYKKDMEQEELFETLAQALLASVDRDALS 180

Query: 174 -------VYTNHNIVLETLKVGDE 190
                  + T   I+   LK   +
Sbjct: 181 GWGGVVHIITKEGIISRELKGRQD 204


>gi|242247301|ref|NP_001156078.1| proteasome subunit beta type 7,10-like [Acyrthosiphon pisum]
 gi|239789989|dbj|BAH71585.1| ACYPI001304 [Acyrthosiphon pisum]
          Length = 270

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 71/175 (40%), Gaps = 11/175 (6%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
              V++A D + +    VM+ N  K+  +GK     G AG++AD   +   +   +    
Sbjct: 48  RDCVILAADTRATSDTIVMEKNCEKIHYIGKYMHCCG-AGTAADTMQVTRMVSANVSLQA 106

Query: 84  NQLLRSSVELAKDWR-----MDKYLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMA 136
            +     V +A   R     + KY+  + A +++   D + T + +        +   ++
Sbjct: 107 FKFPEEMVPVAFAARSLRQYLFKYMGYVSAALILGGVDNSGTHLYSIYPHGSIDKLPYIS 166

Query: 137 IGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           +GSG   A+S   +  +   + EE   +A  A+       + +  N+ L  +K  
Sbjct: 167 MGSGSMAAISELESRWNENLTEEEGMKLACDAILGGVFNDLGSGSNVDLCIIKKD 221


>gi|312066298|ref|XP_003136204.1| proteasome subunit beta type 1 [Loa loa]
 gi|307768639|gb|EFO27873.1| proteasome subunit beta type 1 [Loa loa]
          Length = 258

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 61/210 (29%), Gaps = 23/210 (10%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVS-LGQTVMKANARKVRRLGKGNIIA 59
           +V    +         T   +  D   ++A D ++S     V+  +A K+  L    +++
Sbjct: 37  VVKQASEWNPYSFEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIHVLNDSIVLS 96

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
             AG   D   L   LE +L +Y                + + L             +  
Sbjct: 97  C-AGFYGDVLQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAG 155

Query: 120 V--------ITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNS---A 158
           +         +          G  A GS     +      +              +   A
Sbjct: 156 IDENGKGAVFSYDPIGCIEHIGYTASGSAEPMIMPFFDCQIGLVTVSGDVEKPHLTIERA 215

Query: 159 EEIARKAMSIAADICVYTNHNIVLETLKVG 188
             + + A  +AA+  + T   I L  ++ G
Sbjct: 216 TSLIKDAFRVAAEREISTGDKIHLVIVEAG 245


>gi|256077218|ref|XP_002574904.1| proteasome catalytic subunit 1 (T01 family) [Schistosoma mansoni]
 gi|238660121|emb|CAZ31137.1| proteasome catalytic subunit 1 (T01 family) [Schistosoma mansoni]
          Length = 225

 Score = 86.2 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+     DG VVI  D + S G  V+     K+ +L K       +GS+AD   + + 
Sbjct: 25  GTTLFACEYDGGVVIGADSRTSSGTYVVNRVTDKLTQLTKSIYCC-RSGSAADTQAVADM 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L+ +  ++ R    L        +  N    ++               + +     
Sbjct: 84  VRYQLDFHRLEMNREPTVLEAAVSCKHFCYNYRDDLVAGIIVAGWDEELGGQIYSIPLGG 143

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +     ++  GSG +Y             + EE      K +++A +    +   + L  
Sbjct: 144 MLIRQPIVIGGSGSTYTYGYVDHGFRKGMTREECVSFVLKGVALAINRDGSSGGCVRLAI 203

Query: 185 LKVG 188
           +   
Sbjct: 204 ISKD 207


>gi|312210113|emb|CBX90200.1| similar to proteasome subunit beta type-1-A [Leptosphaeria
           maculans]
          Length = 264

 Score = 85.8 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 67/221 (30%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
              Y    +  + L +      ++AGD + + G  +    A K+ ++G          I+
Sbjct: 32  HGFYPYTDNGGSTLGIAGQDFAILAGDTRSTSGYNINTRYAPKLFKIGGEGSDNKDARIV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L N             
Sbjct: 92  LSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAILA 151

Query: 114 --DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSA 158
             D+     + +             A G+  S  +      ++             +  A
Sbjct: 152 GLDEEGKGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNFKNMYEPGSGVGHELKA 211

Query: 159 -----------EEIARKAMSIAADICVYTNHNIVLETLKVG 188
                      E++ R A + A +  +     + + T+   
Sbjct: 212 KQAEPLPQDHVEDLVRDAFTSAVERHIEVGDGLQMMTITSE 252


>gi|126138200|ref|XP_001385623.1| hypothetical protein PICST_62487 [Scheffersomyces stipitis CBS
           6054]
 gi|126092901|gb|ABN67594.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 206

 Score = 85.8 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 59/207 (28%), Gaps = 24/207 (11%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++  + + +     + IA D ++      +  N  K+ + G    + G  G ++
Sbjct: 1   MSDPSSINGGSAVAMVGKDCIAIACDLRLGNQSLGLANNFEKIFQFGDKTFL-GLTGLAS 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  TL E    K   Y  +  R                  R   Y        L +  + 
Sbjct: 60  DVTTLSEVFRFKNNLYKLREERQIEPKTLANLVSSTLYEKRFGPYFIGPIVAGLDSKTSK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+          +L       E++     +A+  A D  
Sbjct: 120 PFICGFDLIGCIDFAKDFIVSGTATDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRD 179

Query: 174 --------VY--TNHNIVLETLKVGDE 190
                   VY  T   +V   L+   +
Sbjct: 180 ALSGWGAIVYVVTKDKVVKRVLRTRQD 206


>gi|123449540|ref|XP_001313488.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121895373|gb|EAY00559.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 206

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 68/208 (32%), Gaps = 26/208 (12%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                  + + +L +  D  V IA D ++ +    +  + +++ ++     + G AG + 
Sbjct: 1   MSDISTYNGSCVLAMAGDHCVAIASDRRLGVNMLTVSKDFKRIFQINDRIYL-GLAGLAT 59

Query: 67  DAFTLLERLE-----KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD----KTI 117
           D  T+ E+L       +L +      +  + L K    +K         +IA        
Sbjct: 60  DVLTVREQLRFDVNLLELREERPIDPKKFMNLVKSTLYEKRFSPFFVTPVIAGLLPETNE 119

Query: 118 TLVITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
             +      G    P++     G+          +      + +E+     K +  A + 
Sbjct: 120 PYLAASDSIGAFAFPKD-FAVAGTCEESLYGICESAWRPNMNPDELFECTAKCLIAAVER 178

Query: 173 C----------VYTNHNIVLETLKVGDE 190
                      + T   ++++ +K   +
Sbjct: 179 DSISGWGGIVYIITQDKVIIKEIKTRMD 206


>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
          Length = 204

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 25/205 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ + + I+ +     V IA D +  + Q  +  + +KV ++G    I G +G   D 
Sbjct: 2   SILQYNGSAIVAMVGKDCVAIASDMRYGIQQQTIACDMKKVFQMGDKLFI-GLSGLLTDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSS-----VELAKDWRMDKYLRNLEAMILIAD---KTITLV 120
            TL ++ + KL+ Y  +  R         L      +K         ++A    K    +
Sbjct: 61  QTLKQKFDFKLKMYSLRENRPMRPKVFSSLVSSTLYEKRFGPYFVEPVVAGLDAKEGPFI 120

Query: 121 ITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC-- 173
                 G  +  ++  +  G+          A        +E+     +++  A D    
Sbjct: 121 AAMDLIGAPVFAKD-FVVSGTTSDELYGVCEAFWKPNMGPDELFETISQSLLAAVDRDCL 179

Query: 174 --------VYTNHNIVLETLKVGDE 190
                   V T   +  + LK   +
Sbjct: 180 AGWGAIVHVITKDGVTTKQLKSRKD 204


>gi|68482775|ref|XP_714697.1| hypothetical protein CaO19.6991 [Candida albicans SC5314]
 gi|46436285|gb|EAK95650.1| hypothetical protein CaO19.6991 [Candida albicans SC5314]
 gi|238880954|gb|EEQ44592.1| proteasome component PRE3 precursor [Candida albicans WO-1]
          Length = 214

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 13/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGSYIANRVTDKLTQIHDTIYCC-RSGSAADTQAVADM 77

Query: 75  LEKKLEQYPNQLLR---SSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMG 125
           ++  L+ Y +QL      +  +A +           NL A I+ A    K    V +   
Sbjct: 78  VKYYLQIYSSQLPPGETPTTNIAANVFQEICYNNKDNLTAGIICAGYDRKNGGSVYSIPI 137

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVL 182
                +      GSG SY               E   E  + A+S A      +   I +
Sbjct: 138 GGSIHKQNYAIAGSGSSYIYGWCDENYKPSMEQEQCVEFVKTALSQAIKWDGSSGGLIRM 197

Query: 183 ETLKVG 188
             L   
Sbjct: 198 VILTKN 203


>gi|256811314|ref|YP_003128683.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
           fervens AG86]
 gi|256794514|gb|ACV25183.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
           fervens AG86]
          Length = 261

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 16/189 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +     VV+A D +++  + V   +  K+ ++      A     +     +  
Sbjct: 34  RGTTAVGIVCKDGVVLAVDRRITS-KLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            RLE ++ +       S   LAK     K                +I   DK    +   
Sbjct: 93  ARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEARLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNI 180
                  E    AIGSG    +           + E   E+A  A++ A +  +    N+
Sbjct: 153 DPSGALIEYKATAIGSGRPVVMELLEKEYKDDMTLEEGLELAITALTKANE-DI-KPENV 210

Query: 181 VLETLKVGD 189
            +  + V D
Sbjct: 211 DVCVITVKD 219


>gi|321456221|gb|EFX67334.1| hypothetical protein DAPPUDRAFT_231791 [Daphnia pulex]
          Length = 205

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   +L ++  G V IA D +  +  + +  + +++  +G    I G  G + D 
Sbjct: 2   SILSYNGGCVLAMKGKGCVAIASDRRFGVQTSTLAMDFQRIFEMGPHLYI-GLPGLATDT 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM---- 124
            T+ ERL  +L  Y  +  R          +   L          +  I  +        
Sbjct: 61  LTVHERLRFRLNLYELRESRKIKPQTFSAMVSNLLYERRFGPYFVEPVIAGLDPVTWEPF 120

Query: 125 -------GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
                  G    PE+  +  G+          AL       +++     +A+  A D   
Sbjct: 121 ISAMDLIGCPNMPED-FVVAGTCAEQLFGMCEALWEPNLEPDDLFETISQALMNAFDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +    V+  ++  
Sbjct: 180 ISGWGGVVHIIEKD 193


>gi|195120908|ref|XP_002004963.1| GI19318 [Drosophila mojavensis]
 gi|193910031|gb|EDW08898.1| GI19318 [Drosophila mojavensis]
          Length = 224

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 60/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTIL    DG VV+  D + S    V    A K+ R+         +GS+A   TL E 
Sbjct: 9   GTTILAAEFDGGVVLGADTRTSCRTYVSNRTADKLTRITDHIYCC-RSGSAAQTQTLAES 67

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE----- 129
           +   L  + N    S +      +    + +   ++L +           G V       
Sbjct: 68  VGSSLCGFQNVSNASCLVRDAAVQFRNKIYSTRKLLLASIIVAGWDRALGGQVYTVPISG 127

Query: 130 --PENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG SY      A          A ++ ++A+ +A      +   I +  
Sbjct: 128 LLVPERYAMAGSGSSYIQGFMAAHFKPGLNQEDAVDVVKRAIRLAIRQDCSSGGVIRIGI 187

Query: 185 LKVG 188
           +   
Sbjct: 188 ITAD 191


>gi|225712736|gb|ACO12214.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
 gi|225712738|gb|ACO12215.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
 gi|290462661|gb|ADD24378.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
 gi|290561791|gb|ADD38293.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
          Length = 227

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+L       V++A D + S G  V+   + K+  + +  I+   +GS+AD   + + 
Sbjct: 29  GTTLLACEYKDGVMLAADCRTSRGSLVVNRESNKLTPVSEN-ILCCRSGSAADTQAIAKA 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL-VITGMGDV 127
           +   L+ Y   +  ++      +            +         DK     V +     
Sbjct: 88  VRYNLDMYNVMMGETAPVETVAYMFKSICYEYRDSLTAGILIGGWDKIKGGQVYSIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLET 184
           +       + GSG  Y  +   A      S EE   +  K ++ A +    +  +    +
Sbjct: 148 MCVRQPYTSGGSGSVYLHAFMSANYKKDMSKEECRDLLVKGIASAVEFDGSSGGSCRWAS 207

Query: 185 LKVG 188
           +   
Sbjct: 208 ITKD 211


>gi|67526597|ref|XP_661360.1| hypothetical protein AN3756.2 [Aspergillus nidulans FGSC A4]
 gi|40740774|gb|EAA59964.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259481696|tpe|CBF75458.1| TPA: putative proteasome core beta subunit (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 233

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 52/184 (28%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 31  GTSIMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 89

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y                  +     + M+                V +     
Sbjct: 90  VSYHLNMYSIVNNEPPSTQVAAALFQELCYENKDMLSAGIIIAGYDPRHGGQVYSIPLGG 149

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + E   E  R A+  A      +   I +  
Sbjct: 150 SLHKQAYSIGGSGSTYIYGYCDANWKENMTEEEGVEFVRGALREAIKWDGSSGGVIRMVV 209

Query: 185 LKVG 188
           L   
Sbjct: 210 LTKN 213


>gi|171680321|ref|XP_001905106.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939787|emb|CAP65013.1| unnamed protein product [Podospora anserina S mat+]
          Length = 264

 Score = 85.8 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 63/221 (28%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
            +      +  + L +      ++AGD +++ G ++      KV ++G          ++
Sbjct: 32  HRFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRFHPKVFKIGGTTSDQSDATLV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+   + Y  +  +     A   R+   L         A   + 
Sbjct: 92  LSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYAYAILG 151

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
            +         +             A G+  S  +      ++                 
Sbjct: 152 GLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQFIPGSGEGHALQE 211

Query: 154 ------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                 T+   E + + A   A +  +     + +  +   
Sbjct: 212 RERRPLTRQEVETLVKDAFDGAVERHIEVGDGLQMMIITKE 252


>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus anophagefferens]
          Length = 150

 Score = 85.4 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 53/150 (35%), Gaps = 9/150 (6%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                 +  T L +      V+A D ++S G ++M     K+ +LG   ++A  AG   D
Sbjct: 1   FEPYDFNGGTTLAISGADFAVVAADTRMSTGYSIMTRKMSKLHQLGPNTVLAA-AGCQTD 59

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKT-ITL 119
              L++ L+ + + Y +Q  ++    +    +   L         A       DK     
Sbjct: 60  VVCLVDVLKTRQKMYKHQTGKNMTTTSIAQMLGNTLYYKRFFPYYAFNVLAGVDKEGKGC 119

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAAR 149
           V +             A GSG SY +    
Sbjct: 120 VYSYDAIGSFERVPFSASGSGQSYIIPLLD 149


>gi|330791343|ref|XP_003283753.1| proteasome subunit beta type 7 [Dictyostelium purpureum]
 gi|325086376|gb|EGC39767.1| proteasome subunit beta type 7 [Dictyostelium purpureum]
          Length = 274

 Score = 85.4 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 10/185 (5%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
            K   TTI+ V  +G VV+  D + + G  V   N  K+  +       G AG++AD   
Sbjct: 30  FKKTGTTIVGVVYEGGVVLGADTRATEGPIVADKNCEKIHYIADNIFCCG-AGTAADTEN 88

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGM 124
               +  KL+ +     R +        + + L   +        +   D     + T  
Sbjct: 89  ATALISSKLKLHKLSTGRQTRVTTALTMLKQMLFKYQGHVSAALILGGIDINGPSLHTIY 148

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIV 181
                 +   + +GSG   A++   A   +      A ++  +A+S      + +  N  
Sbjct: 149 PHGSTDQLPYVTMGSGSLAAMAVFEAKYKSNMNKQEAIDLVAEAISSGIFNDLGSGSNCD 208

Query: 182 LETLK 186
           +  ++
Sbjct: 209 VTVIE 213


>gi|323309416|gb|EGA62633.1| Pup3p [Saccharomyces cerevisiae FostersO]
          Length = 191

 Score = 85.4 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 15/182 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++      +     K+   G   +  G  G + D  TL E    K  
Sbjct: 1   MTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGH--VFLGITGLATDVTTLNEMFRYKTN 58

Query: 81  QYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R+               + R   Y        + +      +        ++ 
Sbjct: 59  LYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDE 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+          +L       E++     +A+  AAD    +    V+  +K 
Sbjct: 119 AKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKK 178

Query: 188 GD 189
            +
Sbjct: 179 DE 180


>gi|67484636|ref|XP_657538.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56474796|gb|EAL52153.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 262

 Score = 85.4 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 12/185 (6%)

Query: 15  ATTILTVRKDGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            TTI  +  D    VV+A D + ++G  V      K+ +L       G AG++AD     
Sbjct: 25  GTTICGLVCDKGQTVVLACDSRATVGPIVADKACMKLHKLAPNIYCGG-AGTAADLTHAT 83

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGD 126
             +  KL  +   + +          + ++L      I         D T   +     D
Sbjct: 84  NFIATKLGVHRFTIGQMPRVDTAVTMLKRHLFPYGGHIGAYLVVGGYDYTGAHLWGVYAD 143

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM-SIAADI--CVYTNHNIVLE 183
               ++   ++GSG   A +      +   + EE  + A  +I A I   + +   + + 
Sbjct: 144 GSTSQHNYYSLGSGSIAATTMLDDQWNENLTREEGVKLATQAILAGIFNDMGSGGRVNVC 203

Query: 184 TLKVG 188
            +   
Sbjct: 204 VIDKN 208


>gi|170583083|ref|XP_001896421.1| proteasome subunit beta type 3 [Brugia malayi]
 gi|158596348|gb|EDP34705.1| proteasome subunit beta type 3, putative [Brugia malayi]
          Length = 205

 Score = 85.4 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 24/205 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     TIL +  +  V IA D ++    T +  N +KV +LG+  +  G  G  +DA
Sbjct: 2   SIMSYSGGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGE-KVYIGLGGFHSDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITL 119
            T+L+++  +   Y  +  R          +   L          +              
Sbjct: 61  KTVLDKITFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPY 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC-- 173
           +        +   N  +A+G+G  Y L           + +E+     ++M  A +    
Sbjct: 121 ICAMDTIGCISAPNDFVAVGTGTEYLLGVCEGFWKEGMNPDELFEATAQSMLSAMERDAA 180

Query: 174 ------VY--TNHNIVLETLKVGDE 190
                 VY  T   + ++T+K   +
Sbjct: 181 SGWGAIVYTITKDKVNIKTIKTRMD 205


>gi|71018283|ref|XP_759372.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
 gi|46099097|gb|EAK84330.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
          Length = 356

 Score = 85.4 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 27/207 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
            ++G +      +  +I  V      VIA D + S G  +      KV RL     +A  
Sbjct: 91  HMVGHQFSPYDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLAT- 149

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV- 120
            G +ADA  L+  + ++LE Y +   RS    +    +   L             +  + 
Sbjct: 150 NGFAADAEALVSHVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLD 209

Query: 121 -------ITGMGDVLEPENGVMAIGSGGSYALSAARA--LMSTQNSAEE----------- 160
                   +             A G+  S          +   Q S  E           
Sbjct: 210 EEGKGAVYSFDPVGSYEREFCRAAGAAQSLIQPFFDNQIMFRNQTSTPERTVPTPGQMTL 269

Query: 161 -----IARKAMSIAADICVYTNHNIVL 182
                I   + + A +  +     + +
Sbjct: 270 GEVLKIVVDSFTSATERHIEVGDGLEV 296


>gi|226468552|emb|CAX69953.1| proteasome (prosome, macropain) subunit, beta type, 6 [Schistosoma
           japonicum]
 gi|226484696|emb|CAX74257.1| proteasome (prosome, macropain) subunit, beta type, 6 [Schistosoma
           japonicum]
          Length = 218

 Score = 85.4 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+     DG VVI  D + S G  V+     K+ +L K       +GS+AD  T+ + 
Sbjct: 18  GTTLFACEYDGGVVIGADSRTSSGTYVVNRVTDKLTQLTKSIYCC-RSGSAADTQTVADM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L+ +  ++ R    L        +  N    ++               + +     
Sbjct: 77  VRYQLDFHRLEMNREPTVLEAAVCCQHFCYNYRDDLVAGIIVAGWDEQSGGQIYSIPLGG 136

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +     ++  GSG +Y             + EE      K +++A +    +   I L  
Sbjct: 137 MLIRQPIVIGGSGSTYTYGYVDHDFRKGMTREECINFVLKGVALAINRDGSSGGCIRLAI 196

Query: 185 LKVG 188
           +   
Sbjct: 197 ISKD 200


>gi|124514849|gb|EAY56360.1| putative 20S proteasome beta-subunit [Leptospirillum rubarum]
          Length = 265

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 62/186 (33%), Gaps = 22/186 (11%)

Query: 5   GDKHYA---VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           G +H     V+  ATTIL     G V++AGD + + G  +M     KV  +  G+ +   
Sbjct: 27  GPRHSPEGWVETRATTILAFHFSGGVLVAGDRRATAGNRIMTNRVEKVLEID-GSSLMAI 85

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK------ 115
           AGS A A  +   LE   + Y    L       K   + + LR    M +          
Sbjct: 86  AGSPAFAIEMARILEHSFKYYRRSQLAELSVEGKLRMLAQLLRENVPMAMQGFGAVVPIF 145

Query: 116 --------TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA----R 163
                      +    +             GSG        R L     S   +     R
Sbjct: 146 VTRDSSQAKNQIFFYDILGAHFEGAPFAVAGSGSVEVQGILRYLDRWGMSGRGLVGLSER 205

Query: 164 KAMSIA 169
           +A+++A
Sbjct: 206 EALALA 211


>gi|198417706|ref|XP_002126641.1| PREDICTED: similar to proteasome subunit Y [Ciona intestinalis]
          Length = 217

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  DG VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 17  GTSIMAVEFDGGVVIGADSRTTSGAYIANRVTDKLTPIHDRIFCC-RSGSAADTQAIADA 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   +E     +              +Y  +    +                V T     
Sbjct: 76  VAANVELDGIVMGGLPSVKKAAEIFRQYCYDYRDNLTAGIIVAGWDPKQGGQVYTIPLGG 135

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +         GSG +Y      A      + +E  +    A+S+A +    +   + L  
Sbjct: 136 MLIRQQFSIGGSGSTYIYGHVDATFKENMTKDECIQFCTNALSLAINRDGSSGGVVRLAV 195

Query: 185 LKVG 188
           +   
Sbjct: 196 ITKE 199


>gi|299116535|emb|CBN74723.1| proteasome beta subunit [Ectocarpus siliculosus]
          Length = 220

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 66/201 (32%), Gaps = 19/201 (9%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               ++++  + L +   G V +A D +  L   ++   A++V ++  G ++ GF G   
Sbjct: 15  SSNPLELNGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKV-NGQLLCGFTGLWT 73

Query: 67  DAFTLLERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMI---LIADKTITLV 120
           D  T+++ L  ++            +   LA       Y R         ++A       
Sbjct: 74  DVLTVMQDLSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGR 133

Query: 121 ITGMGDVL----EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
               G  +       +  +  G+          A        EE+   A + +  A +  
Sbjct: 134 PYLCGQDILGAPVEVDDFVVAGTSAQSLYGTCEAFFRPGMEREELFRVASRCLLSALERD 193

Query: 174 VYTN-----HNIVLETLKVGD 189
             +      H I  E ++  +
Sbjct: 194 CLSGYGAVVHLITEEGIETRE 214


>gi|242014499|ref|XP_002427927.1| proteasome subunit beta type 6 precursor, putative [Pediculus
           humanus corporis]
 gi|212512411|gb|EEB15189.1| proteasome subunit beta type 6 precursor, putative [Pediculus
           humanus corporis]
          Length = 226

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 11/187 (5%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   TTI+ V  DG VVI GD + + G  V      K+ ++         +GS+AD   +
Sbjct: 23  ETTGTTIMAVEYDGGVVIGGDSRTTTGGYVANRFTDKLTKITDRIYCC-RSGSAADTQAI 81

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGM 124
            + +E  +     +L   S+         +   +    +                V    
Sbjct: 82  ADIVEYHMNLQNIELGSESLVSTAANVFKEICYSYRDSLTAGIIVAGYDSLYGGQVYCIP 141

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIV 181
              +     V   GSG +Y      +      S EE        +++A      +   I 
Sbjct: 142 IGGMLQRQNVATGGSGSTYVYGYVDSHYKPNMSKEESVNFVTNTVALAMMRDSSSGGVIR 201

Query: 182 LETLKVG 188
           L  +   
Sbjct: 202 LGIIDEN 208


>gi|309266337|ref|XP_003086740.1| PREDICTED: proteasome subunit beta type-3-like [Mus musculus]
 gi|148679117|gb|EDL11064.1| mCG13639 [Mus musculus]
          Length = 205

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 66/193 (34%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +++   V IA D +  +   ++  + +K+  +G    + G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKEKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYV-GLAGLAIDV 60

Query: 69  FTLLERLEKKLEQY-----PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ +RL+  L  Y           + + +  +   +K+        +IA          
Sbjct: 61  QTVAQRLKFLLNLYELKEGWQIKPYTLMSMVANLLYEKWFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEPMYRMCESLWEPNMDPEHLFETISQAMLNAVDRDAV 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHVIEKD 193


>gi|295672716|ref|XP_002796904.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb01]
 gi|226282276|gb|EEH37842.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb01]
          Length = 206

 Score = 85.4 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 52/195 (26%), Gaps = 14/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ L    +  N  K+        + G  G + 
Sbjct: 1   MSSVFDINGGACVAMIGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYL-GLTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  T+ + L  K+  Y  +  R                  R   Y  +     +      
Sbjct: 60  DVSTVSDVLRFKVNMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGE 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             +        ++     +  G+           L       E++     +A+  A D  
Sbjct: 120 PFICGFDSIGCIDFAKDFIVSGTASEQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRD 179

Query: 174 VYTNHNIVLETLKVG 188
             +     +  ++  
Sbjct: 180 ALSGWGAHVYIIEKD 194


>gi|242217207|ref|XP_002474405.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726447|gb|EED80396.1| predicted protein [Postia placenta Mad-698-R]
          Length = 208

 Score = 85.0 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 57/196 (29%), Gaps = 17/196 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +  +++ +     V IA D ++      + ++  K+  +     + G  G + D 
Sbjct: 2   SIMEYNGGSVIAMVGKDCVAIASDLRLGNQALGIASDFEKIFPMTDRVYL-GLPGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMIL----------IADKT 116
            TL E+   +L  Y  +  R          +    Y R      +               
Sbjct: 61  TTLREQFRYRLNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVMAGLQRLPNGGY 120

Query: 117 ITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
              +        +      +  G+  S     A  L       E++     + +  A D 
Sbjct: 121 KPFIAATDLIGCINFAKDFVVAGTASSKLFGVAEGLWEPDLEPEDLFETIAQTLLNAVDR 180

Query: 173 CVYTNHNIVLETLKVG 188
             Y+    V+  +   
Sbjct: 181 DAYSGWGAVVHVITKD 196


>gi|302764110|ref|XP_002965476.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
 gi|302823097|ref|XP_002993203.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
 gi|300138973|gb|EFJ05723.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
 gi|300166290|gb|EFJ32896.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
          Length = 204

 Score = 85.0 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 67/204 (32%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                + + ++ +       IA D ++ +    +  + +++ ++    +  G AG ++D 
Sbjct: 2   SIFTYNGSALVAMVGKDCFAIASDRRLGVNFQTIATDFQRIFKIHD-KLYVGLAGLASDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITL 119
            TL +RL+ +   +  Q  R                  R   Y        L AD    +
Sbjct: 61  QTLYQRLKYRHNLFQLQEERDMRPETFSNFVSATLYEKRFGPYFVQPLIAGLGADNKPYI 120

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--- 173
                   +E     +  G+       A  ++       E++     +A+  + D     
Sbjct: 121 CTMDSIGAIEHSKDFVVGGTASESLYGACESMYKPDMEPEDLFETISQALISSVDRDCLS 180

Query: 174 -----VY--TNHNIVLETLKVGDE 190
                VY  T   +++ TLK   +
Sbjct: 181 GWGGIVYVVTPDQVIVRTLKGRMD 204


>gi|196231444|ref|ZP_03130302.1| 20S proteasome A and B subunits [Chthoniobacter flavus Ellin428]
 gi|196224297|gb|EDY18809.1| 20S proteasome A and B subunits [Chthoniobacter flavus Ellin428]
          Length = 269

 Score = 85.0 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 24/191 (12%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           V+  ATTIL  +  G V++AGD + + G +++   A KV  +   + +   AG  A A+ 
Sbjct: 44  VQTQATTILAFKFAGGVLVAGDRRATAGNSIVYDRADKVLEIDSHS-LMAIAGVPATAWE 102

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG----- 125
           +   LE   + Y    L+      K   + K LR+  + +L     +  +          
Sbjct: 103 MARVLEHSFQFYRRSQLQEMSLEGKVRALSKLLRDNLSFVLQGVGVVVPIFAAYDAEAQL 162

Query: 126 ---------DVLEPENGVMAIGSGGSYALSAAR---------ALMSTQNSAEEIARKAMS 167
                              A GSG     S                 +  A  +A +A+ 
Sbjct: 163 ARLYFYDAMGAQFEAADFAATGSGSPAVRSVLYYENTWGSKPLTKRREAEAVVLALRALD 222

Query: 168 IAADICVYTNH 178
            AA+    T  
Sbjct: 223 TAAENDTATGG 233


>gi|241953471|ref|XP_002419457.1| proteasome subunit, putative [Candida dubliniensis CD36]
 gi|223642797|emb|CAX43051.1| proteasome subunit, putative [Candida dubliniensis CD36]
          Length = 214

 Score = 85.0 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 13/184 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGSYIANRVTDKLTQIHDTIYCC-RSGSAADTQAVADM 77

Query: 75  LEKKLEQYPNQLLR---SSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMG 125
           ++  L+ Y +QL      +  +A +           NL A I+ A    K    V +   
Sbjct: 78  VKYYLQIYSSQLPPGETPTTNIAANVFQEICYNNKDNLTAGIICAGYDKKNGGSVYSIPI 137

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVL 182
                +      GSG SY               EE     + A+S A      +   I +
Sbjct: 138 GGSIHKQNYAIAGSGSSYIYGWCDENFKPSMEQEECVEFVKTALSQAIKWDGSSGGLIRM 197

Query: 183 ETLK 186
             L 
Sbjct: 198 VILT 201


>gi|302309124|ref|NP_986343.2| AGL324Wp [Ashbya gossypii ATCC 10895]
 gi|299788212|gb|AAS54167.2| AGL324Wp [Ashbya gossypii ATCC 10895]
          Length = 243

 Score = 85.0 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 62/215 (28%), Gaps = 29/215 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  TIL +  +   V+AGD + + G ++      KV   G   I+   
Sbjct: 18  VPIQHQFNPYDDNGGTILGIAGEDFAVLAGDTRHTTGYSINSREEPKVFDCGDN-ILISA 76

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV- 120
            G +AD   L++R +  ++ Y     +     +    +   L             I  + 
Sbjct: 77  NGFAADGDALVKRFKNSMKWYRFDHNKKMTIKSAARSIQHLLYGKRMFPYYVHTIIAGLD 136

Query: 121 -------ITGMGDVLEPENGVMAIGSGGSYALSAAR------ALMSTQ-----------N 156
                   +             A G+  S  +                            
Sbjct: 137 EEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPDSNGTKKRALRFL 196

Query: 157 SAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           S +E   + R A + A +  ++    + +  +   
Sbjct: 197 SVDEVVRLVRDAFTSATERHIHVGDGLQIMIVTKD 231


>gi|326368273|ref|NP_001191916.1| proteasome subunit beta type-7 [Acyrthosiphon pisum]
          Length = 270

 Score = 85.0 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 70/175 (40%), Gaps = 11/175 (6%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
              V++A D + +    VM+ N  K+  +GK     G AG++AD   +   +   +    
Sbjct: 48  RDCVILAADTRATSDTIVMEKNCEKIHYIGKYMHCCG-AGTAADTMQVTRMVSANVSLQA 106

Query: 84  NQLLRSSVELAKDWR-----MDKYLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMA 136
            +     V +A   R     + KY+  + A +++   D +   + +        +   ++
Sbjct: 107 FKFPDEMVPVAFAARSLRQYLFKYMGYVSAALILGGIDNSGAHLYSIYPHGSIDKLPYIS 166

Query: 137 IGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           +GSG   A+S   +  +   + EE   +A  A+       + +  N+ L  +K  
Sbjct: 167 MGSGSMAAISELESRWNENLTEEEGMKLACDAILGGVFNDLGSGSNVDLCVIKKD 221


>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii WM276]
 gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
           gattii WM276]
          Length = 272

 Score = 85.0 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 63/213 (29%), Gaps = 27/213 (12%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           V          +  +IL +      +IAGD + S G ++    ARKV +L    ++A   
Sbjct: 19  VQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLAT-N 77

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-- 120
           G +AD    ++R++++LE Y +   +     +    +   L             +  +  
Sbjct: 78  GFAADGNNFVKRVKQRLEWYEHAHNKPMSLKSIARMIQTMLYGKRFFPYYVYNILGGIEE 137

Query: 121 ------ITGMGDVLEPENGVMAIGSGGSYALSAAR-ALMSTQNSAE-------------- 159
                  +             A G+  S         +       E              
Sbjct: 138 DGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQVYFKNQQPEPGAAPFVPGNLPLS 197

Query: 160 ---EIARKAMSIAADICVYTNHNIVLETLKVGD 189
               +   + + A +  +     + +  +   +
Sbjct: 198 TVLSLVVDSFTSATERHIEVGDGMEIYVVMAKE 230


>gi|91087659|ref|XP_973571.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
 gi|270009417|gb|EFA05865.1| hypothetical protein TcasGA2_TC008665 [Tribolium castaneum]
          Length = 224

 Score = 85.0 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 15/195 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M   H       T+I+    +G V+I  D + + G  +      K+ ++         +G
Sbjct: 17  MNAAHS----TGTSIMAAEFNGGVIIGADSRTTTGAYIANRVTDKLTKVTDHIYCC-RSG 71

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTI-- 117
           S+AD   + + +   L  +  +L    +              Y  +L A IL+A      
Sbjct: 72  SAADTQAIADIVAYHLSFHGMELGEEPLVETGAAVFRELCYNYRDSLMAGILVAGWDKRK 131

Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
              V +     +     V   GSG SY      A      S EE  +     +++A    
Sbjct: 132 GGQVYSIPIGGMCVRQQVSIGGSGSSYVYGYVDANYKPNMSKEECVKFITNTLALAMSRD 191

Query: 174 VYTNHNIVLETLKVG 188
             +   + L  +   
Sbjct: 192 GSSGGVVRLGIITEE 206


>gi|253744760|gb|EET00912.1| Proteasome subunit beta type 3 [Giardia intestinalis ATCC 50581]
          Length = 207

 Score = 85.0 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 12/189 (6%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + + + ++ ++    V +A D ++      +     +       + + G AG   D  T 
Sbjct: 6   EYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDVLTT 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVIT 122
             ++  K   Y  Q  R     A    +  +L                  AD    L   
Sbjct: 66  YRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAM 125

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHN 179
                L+        G+   + L    A +    S EEI     + +  A +   Y+   
Sbjct: 126 DTIGCLDDCTNFQIAGTASDFLLGLCEAHIKPDMSEEEILPLMEQIIRSATNRDAYSGWG 185

Query: 180 IVLETLKVG 188
             +  L+  
Sbjct: 186 AHVVVLRRD 194


>gi|325179973|emb|CCA14375.1| proteasome subunit beta type3 putative [Albugo laibachii Nc14]
          Length = 204

 Score = 85.0 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 59/192 (30%), Gaps = 13/192 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  + + I+ +     V IA D ++ L    +  N +KV R+     + G AG + D 
Sbjct: 2   SILSYNGSAIIAMAGKDCVGIACDTRLGLQAQTISTNFQKVFRVSDKIFL-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR--NLEAMILI------ADKTITLV 120
            T+ + L+ K+  Y     R          +   +         +              +
Sbjct: 61  QTVSQLLKFKVNMYKMNEERDLKPETLSSYLSAMMYKKRFGPWFIEPVIAGLTADNQPFL 120

Query: 121 ITGMGDVLEPE-NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYT 176
            +      E +    +  G+          ++      +E++     + +  A +    +
Sbjct: 121 SSMDCLGCEMKTKDFVVAGTMEEALYGMCESMYRPDMESEDLFETLSQCLLSACNRDALS 180

Query: 177 NHNIVLETLKVG 188
               V+  +   
Sbjct: 181 GWGAVVHIITPK 192


>gi|50287473|ref|XP_446166.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525473|emb|CAG59090.1| unnamed protein product [Candida glabrata]
          Length = 242

 Score = 85.0 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 30/216 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  TIL +  +   V+AGD + +   ++      KV   G   II   
Sbjct: 16  VPIEHRFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDN-IIMSA 74

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLR------SSVELAKDWRMDKYLRNLEAMILIA-- 113
            G +AD   L++R +  ++ Y            S+    +     K         +IA  
Sbjct: 75  NGFAADGEALVKRFKNSIKWYHFDHNDKKLSISSAARNIQHLLYGKRFFPYYVHTIIAGL 134

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----------------- 155
            D+    V +             A G+  S  +      ++ +                 
Sbjct: 135 DDEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGTDGKVKRELKY 194

Query: 156 NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
            S EE   + R A + A +  ++    + +  +   
Sbjct: 195 LSLEEVIKLVRDAFTSATERHIHVGDGLEILIVTKE 230


>gi|284165547|ref|YP_003403826.1| proteasome endopeptidase complex, subunit alpha [Haloterrigena
           turkmenica DSM 5511]
 gi|284015202|gb|ADB61153.1| proteasome endopeptidase complex, alpha subunit [Haloterrigena
           turkmenica DSM 5511]
          Length = 249

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 64/190 (33%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
             T  + +R    VV+A D QVS    +  ++  K+ +      I  AG    +     L
Sbjct: 35  RGTASVGIRTPDGVVLAADRQVSS-SLMEPSSVEKIHKADNHVGIASAGHVADARQLVDL 93

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             R  +  +    Q      L R+  +  +++      R     +L+   D     +   
Sbjct: 94  ARRRAQGEQLRYGQTIGVETLTRAVTDHIQEYTQTGGARPFGVALLVGGIDDGEPRLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNI 180
                + E    AIGS  +                E   E+A +A+  A D  V    N+
Sbjct: 154 DPSGTDYEWQAAAIGSNRNEIQEFLEENYRPDADLESGIELALRALGAADDEPV-DAENV 212

Query: 181 VLETLKVGDE 190
            L T+   DE
Sbjct: 213 DLATIDTDDE 222


>gi|145255859|ref|XP_001399123.1| proteasome component C5 [Aspergillus niger CBS 513.88]
 gi|134084720|emb|CAK43377.1| unnamed protein product [Aspergillus niger]
          Length = 260

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 38/220 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD +   G  +      KV ++G         NI+
Sbjct: 28  HSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDDESGEGANIV 87

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L               
Sbjct: 88  LSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILA 147

Query: 114 --DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
             D+     + +             A GS  S  +      ++                 
Sbjct: 148 GLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHALEP 207

Query: 154 ------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
                  +++ E++ R A + A +  +     + +  +  
Sbjct: 208 KKAEPLPRDTVEQLVRDAFTSAVERHIEVGDGLQMMVITR 247


>gi|145521580|ref|XP_001446645.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414123|emb|CAK79248.1| unnamed protein product [Paramecium tetraurelia]
          Length = 206

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 12/181 (6%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           ++  K    +   TTI+ V  DG ++I  D + S GQ V    A K+  +    I    +
Sbjct: 6   ILSSKFEP-ETTGTTIMAVIYDGGLIIGADSRTSSGQFVADRCADKIDYIHD-RIFCLRS 63

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTI- 117
           G++AD   + + +   ++ +  +L R             +L   +    A I++A     
Sbjct: 64  GAAADTQIITKHVRYYVDAHAQELGRLPAVATAANLFRNFLYEYKDSMSASIIVAGWDPY 123

Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               + T        E      GSG ++      +   +  +   +      A++ A   
Sbjct: 124 KGPQIFTLPLGGSVIEQKWSIGGSGSTFIWGFCDSNYQSMLNQIMSRTFVLHAVAHAMFR 183

Query: 173 C 173
            
Sbjct: 184 D 184


>gi|303283082|ref|XP_003060832.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457183|gb|EEH54482.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 239

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 15/186 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VV+  D + S G  V    + K+  +     +   +GS+AD   +   
Sbjct: 22  GTTIMACVYDGGVVLGADSRTSTGVYVANRASDKISSVTDNVWMC-RSGSAADTQNVCAY 80

Query: 75  LEKKLEQYPNQLLRSSVELAK--------DWRMDKYLRNLEAMILIADKTI---TLVITG 123
           ++  ++Q+  +   +   +A              K    L A ++I          V   
Sbjct: 81  VKNLVDQHNMERSDADPGMADVKLVANLTMQIAYKNKDKLSAGMIIGGWDSKRGPQVYGI 140

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNI 180
                         GSGG+Y             S EE      +A+S+A  +   +   I
Sbjct: 141 PLGGSLLPCPFTIGGSGGAYIYGWCDDTWKEGMSREEAEAWVTRAISLAITMDSSSGGVI 200

Query: 181 VLETLK 186
            L T+ 
Sbjct: 201 RLVTID 206


>gi|156554577|ref|XP_001601920.1| PREDICTED: similar to proteasome delta [Nasonia vitripennis]
          Length = 231

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 65/198 (32%), Gaps = 16/198 (8%)

Query: 4   MGDKHYAVKMH-----ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           M D       H      T+I+    +G VVI  D + + G  V    A K+ ++      
Sbjct: 15  MSDSLVPDWAHAEHSTGTSIMACEFEGGVVIGADSRSTTGAYVANRVADKLTKVTDYIYC 74

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIAD 114
              +GSSAD   + + +   L  +  +L                   Y  +L A IL+A 
Sbjct: 75  C-RSGSSADTQAISDIVNYHLGFHRMELGMEPRVETAANVFRELCYNYRDSLMAGILVAG 133

Query: 115 KTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSI 168
                   V +     +     +   GSG SY      A      + +   E+    +++
Sbjct: 134 WDSVKGGQVYSVPLGGMCLRQPISIGGSGSSYVYGYVDANYKPGMTKDQTIELVTNTLAL 193

Query: 169 AADICVYTNHNIVLETLK 186
           A      +   I L  + 
Sbjct: 194 AMSRDGSSGGVIRLGVIT 211


>gi|156847580|ref|XP_001646674.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117353|gb|EDO18816.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 242

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 66/216 (30%), Gaps = 30/216 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  TIL +  +   V+AGD + +   ++      KV   G   +I+  
Sbjct: 16  VPIEHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISA- 74

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELA------KDWRMDKYLRNLEAMILIADK 115
            G +AD   L++R +  ++ Y       ++ L+      +     K         +IA  
Sbjct: 75  NGFAADGEALVKRFKNSIKWYHFDNNDKTLSLSSAARNIQHLLYGKRFFPYYVHTIIAGL 134

Query: 116 TITL---VITGMGDVLEPENGVMAIGSGGSYALSAAR------ALMSTQ----------- 155
                  V +             A G+  S  +                           
Sbjct: 135 DEEGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPDSDGTVKRPLKF 194

Query: 156 NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
            S +E   + R A + A +  ++    + +  +   
Sbjct: 195 LSIDEVIRLVRDAFTSATERHIHVGDGLEILIVTKD 230


>gi|260940863|ref|XP_002615271.1| hypothetical protein CLUG_04153 [Clavispora lusitaniae ATCC 42720]
 gi|238850561|gb|EEQ40025.1| hypothetical protein CLUG_04153 [Clavispora lusitaniae ATCC 42720]
          Length = 218

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 13/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ VR    V++  D + + G  +    + K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVRFKDGVILGADSRTTTGTYIANRVSDKLTQIHDTIYCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQL---LRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMG 125
           ++  L+ Y  QL    + + E+A +           NL A I+ A    K+   V +   
Sbjct: 78  VKYYLQMYAAQLPAGEKPTTEVAANTFQELCYSNKDNLSAGIICAGYDAKSGGAVYSIPI 137

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVL 182
                +      GSG ++           Q   +E     R A++ A      +   + +
Sbjct: 138 GGSIHKQEYAIAGSGSTFIYGWCDKNFRPQMEKDECVSFIRSALAEAIKWDGSSGGVVRM 197

Query: 183 ETLKVG 188
             L   
Sbjct: 198 VILTKD 203


>gi|47223967|emb|CAG06144.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 230

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 68/220 (30%), Gaps = 41/220 (18%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              +  +   ++ +R    V IA D +  +   ++  + +K+  +G+   I G AG + D
Sbjct: 1   QSIMSYNGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYI-GLAGLATD 59

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------IT 118
             T+ +RL+ +L  Y  +  R          +   L          +             
Sbjct: 60  VQTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEP 119

Query: 119 LVITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------------- 156
            + +    G  +E E+  +  G+          +L                         
Sbjct: 120 FICSLDLIGCPMETED-FVVSGTCSEQMYGMCESLWEPDMVSWTFLRRSDTTMMANGFRP 178

Query: 157 -----SAEEIAR---KAMSIAADICVYTNHNIVLETLKVG 188
                 AE++     +AM  A D    +   +V+  ++  
Sbjct: 179 AASRQEAEDLFETISQAMLNAVDRDAVSGMGVVVHVIEKD 218


>gi|224084924|ref|XP_002307450.1| predicted protein [Populus trichocarpa]
 gi|222856899|gb|EEE94446.1| predicted protein [Populus trichocarpa]
          Length = 204

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 63/204 (30%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + I+ +       IA D ++ +    +  + +++ ++    +  G +G   DA
Sbjct: 2   SIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHD-KVFVGLSGLGTDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D     +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFI 120

Query: 121 ITGM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC--- 173
            T       E     +  GS       A  AL       EE+     +A+  + D     
Sbjct: 121 CTMDFIGAKELAKDFVVAGSASESLYGACEALFKPDMEPEELFEVVSQALLASVDRDCLS 180

Query: 174 -----VY--TNHNIVLETLKVGDE 190
                +Y  T   I  + LK   +
Sbjct: 181 GWGGHIYIVTPDEIREKILKGRMD 204


>gi|169769575|ref|XP_001819257.1| proteasome component C5 [Aspergillus oryzae RIB40]
 gi|238488110|ref|XP_002375293.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
 gi|83767116|dbj|BAE57255.1| unnamed protein product [Aspergillus oryzae]
 gi|220700172|gb|EED56511.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
          Length = 261

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 65/221 (29%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD +   G  +    A KV ++G         +II
Sbjct: 29  HSFYPYTDNGGSTLGITGADFAILAGDTRSVAGYNINSRYAPKVFKIGGDDDTGEGAHII 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L               
Sbjct: 89  LSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILA 148

Query: 114 --DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
             D+     + +             A GS  S  +      ++                 
Sbjct: 149 GLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPSSGDGHALEP 208

Query: 154 ------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                  + + E++ R A + A +  +     + +  +   
Sbjct: 209 KKPEPLPRETVEQLVRDAFTSAVERHIEVGDGLQMMVITQN 249


>gi|219127992|ref|XP_002184208.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404439|gb|EEC44386.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 187

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT++ ++  G VV+  D + S+   V    A K+  L    ++     ++         
Sbjct: 2   GTTLVAIKYRGGVVVGADSRTSVSGYVSHRFAHKIAPLTDHTVLLRSGSAADTQQIAESA 61

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN--------LEAMILIADKTITLVITGMGD 126
               L +     +  +V     W                L A          +       
Sbjct: 62  RMTFLHRRYRCGIVPTVSQVAHWIRSTVYEESTEGVVSLLVAGFDPESLKSRIFSVSPSG 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLE 183
            L  E      GSG +Y L      +S   S   A E+ +KA+ +A D    +     + 
Sbjct: 122 ALIEEKTFAVSGSGSTYVLGYLDHHVSGDLSENEAIELCQKAIELAIDRDGSSGGRFNII 181

Query: 184 TL 185
            +
Sbjct: 182 VI 183


>gi|327305623|ref|XP_003237503.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
 gi|326460501|gb|EGD85954.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
          Length = 233

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 57/183 (31%), Gaps = 11/183 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 29  GTSIMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 87

Query: 75  LEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTITL--VITGMGDV 127
           ++  L  Y     R     ++  L ++   D        +I+          V +     
Sbjct: 88  VKYHLGMYGVVYGRQPTTQTAAALFQELCYDNKDALSAGIIIAGYDERHGGQVYSIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A            E  + ++  A      +   I +  
Sbjct: 148 SLHKQPYAIGGSGSTYIYGYCDANWRENMDEAEGVEFVKNSLREAIKWDGSSGGVIRMVV 207

Query: 185 LKV 187
           L  
Sbjct: 208 LTR 210


>gi|67539226|ref|XP_663387.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
 gi|40743686|gb|EAA62876.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
          Length = 551

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G      + +++R+ G   +I GF+G  +D   +   
Sbjct: 331 GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDAAVI-GFSGDVSDMQYIDRL 389

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           LE   + +  +              + K  Y R  +   L           +    + + 
Sbjct: 390 LESIDIRENYSVHGNQLNAKNLHTYLSKVFYKRRSDFNPLWNHILVAGFDSEKKPFLSSA 449

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK----AMS---------IAA 170
                      +A G G   A+   R L   +   EEI+++    A+           A 
Sbjct: 450 DLLGTTFSAPHLATGFGAHLAIPILRRLFPEERPIEEISKEDAVSALKDCLKVLWYRDAR 509

Query: 171 DICVYTNHNIVLETLKVGDE 190
            +  Y+   I  E +++ ++
Sbjct: 510 SMDKYSLALITQEGIEMHED 529


>gi|206603968|gb|EDZ40448.1| Putative 20S proteasome beta-subunit [Leptospirillum sp. Group II
           '5-way CG']
          Length = 265

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 62/186 (33%), Gaps = 22/186 (11%)

Query: 5   GDKHYA---VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           G +H+     +  ATTIL     G V++AGD + + G  +M     KV  +  G+ +   
Sbjct: 27  GPRHFPEGWSETRATTILAFHFSGGVLVAGDRRATAGNRIMTNRVEKVLEID-GSSLMAI 85

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK------ 115
           AGS A A  +   LE   + Y    L       K   + + LR    M +          
Sbjct: 86  AGSPAFAIEMARILEHSFKYYRRSQLAELSVEGKLRMLAQLLRENVPMAMQGFGAVVPIF 145

Query: 116 --------TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA----R 163
                      +    +             GSG        R L     S   +     R
Sbjct: 146 VTRDSSQAKNQIFFYDILGAHFEGAPFAVAGSGSVEVQGILRYLDRWGMSGRGLVGLSER 205

Query: 164 KAMSIA 169
           +A+++A
Sbjct: 206 EALALA 211


>gi|330800977|ref|XP_003288508.1| proteasome subunit beta type 6 [Dictyostelium purpureum]
 gi|325081468|gb|EGC34983.1| proteasome subunit beta type 6 [Dictyostelium purpureum]
          Length = 207

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 11/176 (6%)

Query: 23  KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQY 82
            DG VV+  D + + G  +      K+  + +  I    +GS+AD   + + +   LE +
Sbjct: 15  FDGGVVMGADSRTTTGAYIANRVTNKITPIHE-KIYCCRSGSAADTQAISDYVRYYLEMH 73

Query: 83  PNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL-VITGMGDVLEPENGVM 135
            ++L                  + +  ++        DK     V          +    
Sbjct: 74  TSELCDDPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGGSMVKQPFA 133

Query: 136 AIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKVG 188
             GSG +Y      +      + EE     + ++++A      +   I L  +   
Sbjct: 134 IGGSGSTYIYGYCDSKFKPGMTKEECVEFVKNSLALAMFRDGSSGGVIRLCIIDKN 189


>gi|50660436|gb|AAT80906.1| 26S proteasome beta subunit [Lemna minor]
          Length = 116

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 1/113 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L       V+++ D + S+G  +   + +K+  +    ++   AG +AD      
Sbjct: 5   KGTTTLAFIFKEGVIVSADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHR 63

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
            L  K   +     R          +   L +   M L     I         
Sbjct: 64  NLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSIGTMIAGWDETGPG 116


>gi|72391616|ref|XP_846102.1| proteasome beta 6 subunit [Trypanosoma brucei TREU927]
 gi|62175642|gb|AAX69774.1| proteasome beta 6 subunit [Trypanosoma brucei]
 gi|70802638|gb|AAZ12543.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
          Length = 258

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 21/201 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +  TI  +     VV+  D +++    +   +           I    +G  AD 
Sbjct: 46  SPYTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADR 105

Query: 69  FTLLERLEKKLEQYPNQLL---RSSVELAKDWRMDKYLRNLEA-----MILIADKTITLV 120
             L + L+ +++ Y         S+  +AK      Y R         MI+  D+    V
Sbjct: 106 LQLQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGV 165

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALMST---------QNSAEE---IARKAMS 167
             +               GS  S+       L++            + EE   + + A +
Sbjct: 166 CYSYDPVGSTEPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFT 225

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  ++T   +    +   
Sbjct: 226 GAAERDIFTGDTVCFHIVTAD 246


>gi|67606993|ref|XP_666789.1| proteasome component [Cryptosporidium hominis TU502]
 gi|54657844|gb|EAL36555.1| proteasome component [Cryptosporidium hominis]
          Length = 202

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 14/180 (7%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           +  +   IL ++    V  A D ++ S G   +  +  KV R      + GF+G + D  
Sbjct: 1   MTYNGGAILAMKGKECVAFATDMRLGSNGYRTIGTDFDKVIR-PSSKTLMGFSGLATDIH 59

Query: 70  TLLERLEKKLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
           TL   ++ K   Y  +  R     +   +       K         ++A   +  +  + 
Sbjct: 60  TLTNLIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIA 119

Query: 122 TGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTN 177
                  L   +     G+  +       +        +   EI  + M    D   ++ 
Sbjct: 120 GYDLIGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAFSG 179


>gi|71005512|ref|XP_757422.1| hypothetical protein UM01275.1 [Ustilago maydis 521]
 gi|46096905|gb|EAK82138.1| hypothetical protein UM01275.1 [Ustilago maydis 521]
          Length = 222

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 59/184 (32%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V  D  V++  D + ++G  +      K+  L         +GS+AD   + + 
Sbjct: 20  GTSIMAVAYDKGVILGADSRTTMGSYIANRVTDKLTHLSDRIYCC-RSGSAADTQAIADI 78

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIAD---KTITLVITGMGDV 127
           +   L+ Y  +                   +    L A I++A    K    V       
Sbjct: 79  VTYYLDMYAVESDSPPQTKVAANLFQEIVYQNKDRLSAGIIVAGWDKKDGGRVFNVPLGG 138

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIVLET 184
              E      GSG +Y      A        +   E  + A+++A      +   I L  
Sbjct: 139 GVFEQPWAIGGSGSTYIYGYCDATWKAGWGKHQTIEFVKNALALAMRRDGSSGGTIRLVD 198

Query: 185 LKVG 188
           +   
Sbjct: 199 ITED 202


>gi|196476700|gb|ACG76215.1| proteasome beta 3 subunit [Amblyomma americanum]
          Length = 182

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 54/178 (30%), Gaps = 14/178 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   +L ++    V IA D ++      +  + +++  +G   +  G  G + D 
Sbjct: 2   SIMSYNGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGP-KLYCGLPGLATDT 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAK---------DWRMDKYLRNLEAMILIADKTITL 119
            T+ +RL+ ++  Y  +  R                + R   Y        L        
Sbjct: 61  QTVAQRLKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLDPVSNEPY 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
           +        ++     +  G+           L       +E+     +A+  A D  
Sbjct: 121 ICGMDLIGCIDSPKDFVVAGTCEEQCYGMCETLWEPDMGPDELFEATAQALMNAFDRD 178


>gi|332823719|ref|XP_003311252.1| PREDICTED: proteasome subunit beta type-8 [Pan troglodytes]
          Length = 160

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 10/132 (7%)

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            +GS+AD       L K+   Y  +        A    +   +     M L         
Sbjct: 1   MSGSAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGW 60

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAA 170
           DK    +             + + GSG +YA     +      S EE   + R+A++ A 
Sbjct: 61  DKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYAT 120

Query: 171 DICVYTNHNIVL 182
               Y+   + +
Sbjct: 121 HRDSYSGGVVNM 132


>gi|298508229|pdb|1VSY|H Chain H, Proteasome Activator Complex
 gi|298508243|pdb|1VSY|V Chain V, Proteasome Activator Complex
 gi|298508445|pdb|3L5Q|B Chain B, Proteasome Activator Complex
 gi|298508459|pdb|3L5Q|D Chain D, Proteasome Activator Complex
          Length = 196

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 10/180 (5%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           +I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + ++
Sbjct: 2   SIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAIADIVQ 60

Query: 77  KKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMGDVLEP 130
             LE Y +Q    S E A         +   NL A I++A   DK    V T        
Sbjct: 61  YHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVH 120

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETLKV 187
           +      GSG ++             S EE     + ++S A      +   I +  L  
Sbjct: 121 KLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTA 180


>gi|296425517|ref|XP_002842287.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638550|emb|CAZ86478.1| unnamed protein product [Tuber melanosporum]
          Length = 593

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 60/212 (28%), Gaps = 28/212 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           ++M +      ++   ++ +     V IA D ++ +    +  +  K+   G   +  G 
Sbjct: 387 LIMSN---PFSINGGAVVAMVGKDCVAIACDLRLGMQALTVSNDFPKIFNYGD--VYLGL 441

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILI 112
            G + D  ++ E    K+  Y  +  R                  R   Y  +     + 
Sbjct: 442 TGLATDVTSVSELFRYKVNMYRLREERDIEPQTMANLVSSSLYEKRFGPYFVSPVIAGIN 501

Query: 113 ADKTITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSI 168
                  +        +      +  G+           L       E++     +A+  
Sbjct: 502 QHSGKPFICGFDSIGCINFAEDFIVSGTASDQLFGTCEGLWEPDLEPEDLFETISQALLN 561

Query: 169 AADIC--------VY--TNHNIVLETLKVGDE 190
           + D          VY  T   +V   LK   +
Sbjct: 562 SVDRDALSGWGAHVYLVTKDKVVKRLLKGRQD 593


>gi|190347256|gb|EDK39498.2| hypothetical protein PGUG_03596 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 217

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 13/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGSYIANRVTDKLTQIHDTIYCC-RSGSAADTQAIADI 77

Query: 75  LEKKLEQYPNQL---LRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMG 125
           ++  ++ Y +QL    + + ++A +       K   NL A I+ A    K    V +   
Sbjct: 78  VKYYMQIYTSQLPHDEKPTTQIAANIFQELCYKNKDNLTAGIICAGYDEKNKGTVYSIPI 137

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVL 182
                +      GSG ++               +E     + A+S A      +   I +
Sbjct: 138 GGSIHQQEYAIAGSGSTFIYGWCNENYKKDMEKDECVSFIKTALSEAIKWDGSSGGVIRM 197

Query: 183 ETLKVG 188
             L   
Sbjct: 198 VVLTAD 203


>gi|162605850|ref|XP_001713440.1| 26S proteasome SU [Guillardia theta]
 gi|13794372|gb|AAK39749.1|AF083031_106 26S proteasome SU [Guillardia theta]
          Length = 236

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 78/189 (41%), Gaps = 10/189 (5%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +K+  V    TTI+ +     +V+A D + + G+    ++ +K+  +G    I G AG+S
Sbjct: 25  NKNIKVDKTGTTIIGICIKNHIVLAADTRSTRGKITNDSSCKKIHFIGNNIGICG-AGTS 83

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSS----VELAKDWRMDKYLRNLEAMILIADKTITL-- 119
           AD   ++  L+  +     + L+ +            +  Y   + A ++I         
Sbjct: 84  ADIQNIINYLKININFLNLEKLKETNLEECTKIIQNFLFNYKGMISAALIIGGFDYYGLN 143

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYT 176
           + +   D    +N  +++GSG   A++      +      SA  I+++A+       + +
Sbjct: 144 LYSIYPDGSMDKNFFISMGSGSFAAMTILEKNYNEIMSLESAINISKQAILAGVYNDLGS 203

Query: 177 NHNIVLETL 185
             ++ L  +
Sbjct: 204 GGSVDLYVI 212


>gi|289742193|gb|ADD19844.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Glossina
           morsitans morsitans]
          Length = 205

 Score = 83.9 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 60/208 (28%), Gaps = 30/208 (14%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V I  D +  +    +  +  KV ++     + G  G   D 
Sbjct: 2   SILTYNGGCVVAMRGKDCVAIGTDRRFGVQAQTISTDFDKVFQMNPRMFL-GLVGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL  +   Y  +  R          +  +L               ++     + +
Sbjct: 61  LTVKDRLHFRKSLYETRENREMQPERFAAMLSSFLYEHRFGPFFI---EPVIAGLDPETM 117

Query: 129 EP-------------ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP              +  +  G+           L      A E+     +AM  A D 
Sbjct: 118 EPFICNMDLIGCPNIPDDFVVAGTCYEQLYGMCETLWKPDMKAPELFETISQAMINAFDR 177

Query: 173 CVYTN----------HNIVLETLKVGDE 190
              +             I ++TLK   +
Sbjct: 178 DAISGWGATVYVIEQDKITIKTLKTRMD 205


>gi|150864238|ref|XP_001382979.2| hypothetical protein PICST_41720 [Scheffersomyces stipitis CBS
           6054]
 gi|149385494|gb|ABN64950.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 217

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 13/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V+    V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVKFKDGVILGADSRTTTGSYIANRVTDKLTQIHDTIYCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQL---LRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMG 125
           ++  L+ Y +QL    + + ++A +           NL A I+ A    K    V +   
Sbjct: 78  VKYYLQIYASQLPNDEKPTTQVAANVFQELCYNNKDNLTAGIICAGYDKKNKGSVYSIPI 137

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVL 182
                +      GSG ++               +E     + A+S A      +   I +
Sbjct: 138 GGSIHKQDYAIAGSGSTFIYGWCNEHFKHDMEQDETVEFIKTALSEAIKWDGSSGGVIRM 197

Query: 183 ETLKVG 188
             L   
Sbjct: 198 VVLTEK 203


>gi|70991375|ref|XP_750536.1| proteasome component Prs3 [Aspergillus fumigatus Af293]
 gi|66848169|gb|EAL88498.1| proteasome component Prs3, putative [Aspergillus fumigatus Af293]
          Length = 261

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 64/219 (29%), Gaps = 38/219 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD +   G  +      KV ++G         +I+
Sbjct: 29  HSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGAHIL 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
               G +AD   L ERL+  +  Y  Q  +     A   R+   L               
Sbjct: 89  LSVVGFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILA 148

Query: 114 --DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
             D+     + +             A GS  S  +      ++ +N              
Sbjct: 149 GLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHALEP 208

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLK 186
                    + E++ R A + A +  +     + +  + 
Sbjct: 209 KKAEPLPRATVEQLVRDAFTSAVERHIEVGDGLQMMVIT 247


>gi|159124092|gb|EDP49210.1| proteasome component Prs3, putative [Aspergillus fumigatus A1163]
          Length = 261

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 64/219 (29%), Gaps = 38/219 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD +   G  +      KV ++G         +I+
Sbjct: 29  HSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGAHIL 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
               G +AD   L ERL+  +  Y  Q  +     A   R+   L               
Sbjct: 89  LSVVGFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILA 148

Query: 114 --DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
             D+     + +             A GS  S  +      ++ +N              
Sbjct: 149 GLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHALEP 208

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLK 186
                    + E++ R A + A +  +     + +  + 
Sbjct: 209 KKAEPLPRATVEQLVRDAFTSAVERHIEVGDGLQMMVIT 247


>gi|29841433|gb|AAP06465.1| similar to XM_027825 proteasome (prosome, macropain) subunit, beta
           type 6 in Homo sapiens [Schistosoma japonicum]
          Length = 218

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+     DG VVI  D + S G  V+     K+ +L K       +GS+AD  T+ + 
Sbjct: 18  GTTLFACEYDGGVVIGADSRTSSGTYVVNRVTDKLTQLTKSIYCC-RSGSAADTQTVADM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +  +L+ +  ++ R    L        +  N    ++               + +     
Sbjct: 77  VRYQLDFHRLEMNREPTVLEAAVCCQHFCYNYRDDLVAGIIVAGWDEQSGGQIYSIPLGG 136

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +     ++  GSG +Y        +    + EE      K +++A +    +   I L  
Sbjct: 137 MLIRQPIVIGGSGSTYTYGYVDHDIRKGMTREECINFVLKGVALAINRDGSSGGCIRLAI 196

Query: 185 LKVG 188
           +   
Sbjct: 197 ISKD 200


>gi|239788939|dbj|BAH71121.1| ACYPI009408 [Acyrthosiphon pisum]
          Length = 243

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG V+I  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 25  GTTIIAAIYDGGVIIGADSRTTTGAYIANRVTDKLTKVCDNIYCC-RSGSAADTQAITDI 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP---- 130
           +   ++    Q+    +  A        +      +              G V       
Sbjct: 84  VAYYMDLTSIQMDEPPLVRAAANVFKNLIYENRHQLTAGVIVAGWDSRFGGQVYSINVSG 143

Query: 131 ---ENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +  +   GSG SY      +      +    E +   A+S+A    
Sbjct: 144 TIVQQNISIGGSGSSYLYGFMDSQYKDGMTQQECENLVLNAISLAIKRD 192


>gi|71655250|ref|XP_816231.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70881343|gb|EAN94380.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
          Length = 246

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 21/201 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANAR-KVRRLGKGNIIA--GFAGSS 65
                +  TI  +     V++ GD +++    +   + R K+ +L +   +A  G     
Sbjct: 34  SPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGMQADR 93

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD------KTITL 119
                +L+   +  +      L S+  +AK      Y R                K   +
Sbjct: 94  LQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEKGAGV 153

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALM-----------STQNSA-EEIARKAMS 167
             +               GS  S+       L+               +   E+ + A +
Sbjct: 154 CYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMVQQAPAELSMTETLEMLKNAFT 213

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  ++T   +    +   
Sbjct: 214 GAAERDIFTGDAVCFHIITAD 234


>gi|193716235|ref|XP_001951926.1| PREDICTED: proteasome subunit beta type-6-like [Acyrthosiphon
           pisum]
          Length = 243

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 11/169 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG V+I  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 25  GTTIIAAIYDGGVIIGADSRTTTGAYIANRVTDKLTKVCDNIYCC-RSGSAADTQAITDI 83

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP---- 130
           +   ++    Q+    +  A        +      +              G V       
Sbjct: 84  VAYYMDLTSIQMDEPPLVRAAANVFKNLIYENRHQLTAGVIVAGWDSRFGGQVYSINVSG 143

Query: 131 ---ENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +  +   GSG SY      +      +    E +   A+S+A    
Sbjct: 144 TIVQQNISIGGSGSSYLYGFMDSQYKDGMTQQECENLVLNAISLAIKRD 192


>gi|327357407|gb|EGE86264.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
          Length = 231

 Score = 83.9 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 53/184 (28%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 30  GTSIMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L  Y                  +   + + M+                V +     
Sbjct: 89  VSYHLGMYGVVNQEPPTTQTAAALFQELCYDNKDMLSAGIIIAGYDPRHGGQVYSIPLGG 148

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + E   E  + ++  A      +   I +  
Sbjct: 149 SLHKQSYAIGGSGSTYIYGYCDAKWREGMTEEEGIEFVKTSLQEAIKWDGSSGGVIRMVV 208

Query: 185 LKVG 188
           L   
Sbjct: 209 LTAK 212


>gi|119177181|ref|XP_001240403.1| proteasome component precursor [Coccidioides immitis RS]
 gi|303316125|ref|XP_003068067.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240107743|gb|EER25922.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032435|gb|EFW14388.1| proteasome component [Coccidioides posadasii str. Silveira]
          Length = 231

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 54/184 (29%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 30  GTSIMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP---- 130
           +   L  Y     +            +   + + M+              G V       
Sbjct: 89  VRYHLGMYGVVYDQPPTTQTAAALFQELCYDNKDMLSAGIIIAGYDHRHGGQVYSIPLGG 148

Query: 131 ---ENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      + E   E  + A+  A      +   I L  
Sbjct: 149 SLHKQAYAIGGSGSTYIYGYCDAHWREGMTEEEGIEFVKGALHEAIKWDGSSGGVIRLVV 208

Query: 185 LKVG 188
           L   
Sbjct: 209 LTAK 212


>gi|18250329|gb|AAL60589.1| proteosome subunit LMP7/PSMB8 [Oncorhynchus mykiss]
          Length = 168

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 10/139 (7%)

Query: 54  KGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
              ++   +GS+AD       L K+   Y  +  +     A    +   +     M L  
Sbjct: 2   NPYLLGTMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLCNMMLGYRGMGLSM 61

Query: 114 -------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIAR 163
                  D     +     +       + + G G SYA     +      +   A E+ R
Sbjct: 62  GSMIVGWDNKGPGLYYVDDNATRLSGRMFSTGCGSSYAYGVMDSGYHEDMTVEEAYELGR 121

Query: 164 KAMSIAADICVYTNHNIVL 182
           + ++ A     Y+   + L
Sbjct: 122 RGITHATHRDAYSGGVVNL 140


>gi|259484729|tpe|CBF81200.1| TPA: hypothetical proteasome beta 7 subunit (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 260

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G      + +++R+ G   +I GF+G  +D   +   
Sbjct: 40  GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDAAVI-GFSGDVSDMQYIDRL 98

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           LE   + +  +              + K  Y R  +   L           +    + + 
Sbjct: 99  LESIDIRENYSVHGNQLNAKNLHTYLSKVFYKRRSDFNPLWNHILVAGFDSEKKPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK----AMS---------IAA 170
                      +A G G   A+   R L   +   EEI+++    A+           A 
Sbjct: 159 DLLGTTFSAPHLATGFGAHLAIPILRRLFPEERPIEEISKEDAVSALKDCLKVLWYRDAR 218

Query: 171 DICVYTNHNIVLETLKVGDE 190
            +  Y+   I  E +++ ++
Sbjct: 219 SMDKYSLALITQEGIEMHED 238


>gi|296413642|ref|XP_002836518.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630345|emb|CAZ80709.1| unnamed protein product [Tuber melanosporum]
          Length = 229

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 11/182 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+    DG V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 29  GTSIMAALFDGGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAIADI 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           +   L+ Y  Q                        L+A ++IA         V +     
Sbjct: 88  VHYYLQLYNVQNHEPPTTQVAASIFQELCYSNKDQLQASMIIAGYDARHKGEVYSIPLGG 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      +     E  + A++ A      +   I +  
Sbjct: 148 SLHKQRYAIGGSGSTYIYGYCDANWKENMTEGECVEFVKGALAEAVKWDGSSGGVIRMVV 207

Query: 185 LK 186
           L 
Sbjct: 208 LT 209


>gi|121709884|ref|XP_001272558.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
 gi|119400708|gb|EAW11132.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
          Length = 261

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 64/219 (29%), Gaps = 38/219 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD +   G  +      KV ++G          I+
Sbjct: 29  HSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGARIL 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L               
Sbjct: 89  LSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILA 148

Query: 114 --DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
             D+     + +             A GS  S  +      ++ +N              
Sbjct: 149 GLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHALEP 208

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLK 186
                    + E++ R A + A +  +     + +  + 
Sbjct: 209 KKAEPLPRGTVEQLVRDAFTSAVERHIEVGDGLQMMVIT 247


>gi|297839603|ref|XP_002887683.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333524|gb|EFH63942.1| hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 204

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++     I G +G + D 
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFI-GLSGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR--NLEAMILI------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L        +         D     +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  A+      AEE+     +A+  + D  
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRD 177


>gi|170036732|ref|XP_001846216.1| proteasome subunit beta type 6 [Culex quinquefasciatus]
 gi|167879613|gb|EDS42996.1| proteasome subunit beta type 6 [Culex quinquefasciatus]
          Length = 227

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  V      K+ +L    I    +GS+AD   + + 
Sbjct: 17  GTTIMAVEFDGGVVIGADSRTSTGTYVANRVTDKLTKLTD-KIYCCRSGSAADTQAIADI 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-------KTITLVITGMGDV 127
           +   L  + NQ     +         +Y  N    ++          K    V +     
Sbjct: 76  VAYSLNYHENQTGEEPLVSDAAHEFRQYCYNYRDSLVAGIIVAGWDKKNGGQVYSVPVGG 135

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
           ++    V   GSG SY     +             E  +K++  A
Sbjct: 136 MQIRQSVTIGGSGSSYIYGFVKEHYREGMAKDECMEFVKKSIFHA 180


>gi|170594089|ref|XP_001901796.1| Proteasome A-type and B-type family protein [Brugia malayi]
 gi|158590740|gb|EDP29355.1| Proteasome A-type and B-type family protein [Brugia malayi]
          Length = 209

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 53/177 (29%), Gaps = 11/177 (6%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +  D  VV+  D + S G  +      K+  +    ++   +GS+AD   + + ++  +E
Sbjct: 1   MEFDSGVVVGTDSRTSSGSYISSRATDKITPVTDRMVVC-RSGSAADTQAISDIVKYYIE 59

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMI-------LIADKTITLVITGMGDVLEPENG 133
            Y                   +L      +          D     +             
Sbjct: 60  VYSMMEEEEVTVGRSAQIFRNFLYKYRDSLSASVLVAGYDDIEGGQLYAIPMGGYVTRQR 119

Query: 134 VMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKV 187
             A G G ++      +      +AE   E+   A+++A      +   I L  +  
Sbjct: 120 CAASGRGSTFVQGFLDSQWKPGMTAEKCKELVLNAVALATIRDGSSGGVIRLAVIDK 176


>gi|324524031|gb|ADY48349.1| Proteasome subunit beta type-3 [Ascaris suum]
          Length = 205

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 24/205 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +  TIL +  +  V IA D ++    T +  N +KV +LG   +  G  G  +DA
Sbjct: 2   SIMSYNGGTILAMAGNECVCIATDLRLGEQMTTIATNVKKVHKLGD-RVYIGLGGFYSDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE----------AMILIADKTIT 118
            T+L+++  +   Y  +  R          +   L              A +        
Sbjct: 61  KTVLDKILFRKNLYELRENRKIKPEVAATMISNLLYQHRFGGYLTEPLVAGLDPVTNKAY 120

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC-- 173
           +        +      +A+G+G  Y L           +A+E+     ++M  A +    
Sbjct: 121 ICGMDTIGCIAAPKDFVAVGTGTEYLLGVCEGFWHENMNADELFEATAQSMLSAMERDAA 180

Query: 174 ------VY--TNHNIVLETLKVGDE 190
                 +Y  T + + ++T+K   +
Sbjct: 181 SGWGVLIYTITKNKVNIKTIKARMD 205


>gi|71654519|ref|XP_815877.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70880966|gb|EAN94026.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
          Length = 246

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 21/201 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANAR-KVRRLGKGNIIA--GFAGSS 65
                +  TI  +     V++ GD +++    +   + R K+ +L +   +A  G     
Sbjct: 34  SPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGMQADR 93

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD------KTITL 119
                +L+   +  +      L S+  +AK      Y R                K   +
Sbjct: 94  LQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEKGAGV 153

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALM-----------STQNSA-EEIARKAMS 167
             +               GS  S+       L+               +   E+ + A +
Sbjct: 154 CYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLTRQHMVQQAPAELSMTETLEMLKNAFT 213

Query: 168 IAADICVYTNHNIVLETLKVG 188
            AA+  ++T   +    +   
Sbjct: 214 GAAERDIFTGDAVCFHIITAD 234


>gi|50308397|ref|XP_454200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643335|emb|CAG99287.1| KLLA0E05633p [Kluyveromyces lactis]
          Length = 240

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 58/215 (26%), Gaps = 29/215 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  TIL +  +   V+AGD + +   ++      KV       I+   
Sbjct: 15  VPIQHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFECEDN-ILISA 73

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW-----RMDKYLRNLEAMILIADKT 116
            G +AD   L++R +     Y     +     +           K +       +IA   
Sbjct: 74  NGFAADGEALVKRFKNSQMWYHFNHNKKLTIKSAARNIQHLLYGKRMFPYYVHTIIAGLD 133

Query: 117 ITL---VITGMGDVLEPENGVMAIGSGGSYALSAAR------ALMSTQ-----------N 156
                 V +             A GS  S  +                            
Sbjct: 134 EEGKGAVYSFDPVGSYEREQCRAGGSAASLIMPFLDNQVNLKNQYEPDSNGTKRKEVKYL 193

Query: 157 SAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
             EE   + R A + A +  +     + +  +   
Sbjct: 194 GVEEVIKLVRDAFTSATERHINVGDGLEILIVTKD 228


>gi|260941638|ref|XP_002614985.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238851408|gb|EEQ40872.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 241

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 64/216 (29%), Gaps = 30/216 (13%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD ++  G  +      K+  +G   +    
Sbjct: 15  VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRIVSGYNIDSRYEPKIFDVGDNIV-MTA 73

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADK 115
            G +AD   L+++     + Y           RS+    +     K         LIA  
Sbjct: 74  NGFAADGAALIDQFRSSFKWYKFDHNNKKLTIRSAARYIQHLLYGKRFFPYYVSTLIAGL 133

Query: 116 TITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----------------- 155
                  V +             A G+  S  +      ++ +                 
Sbjct: 134 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGSDGTKKKELRY 193

Query: 156 ---NSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
              +   ++ + A S A +  +Y    + +  +   
Sbjct: 194 LKLDEVLQLVKDAFSSATERHIYVGDGLEIFIVTKD 229


>gi|134106685|ref|XP_777884.1| hypothetical protein CNBA3530 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260584|gb|EAL23237.1| hypothetical protein CNBA3530 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 216

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 59/197 (29%), Gaps = 19/197 (9%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++++  +++ +     V IA D ++   Q  + AN  KV  +    +  G  G + D +T
Sbjct: 4   MELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPI-NDKLYCGLPGLATDVYT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTITLVITGMG 125
           L E L  ++  Y  +  R          +      K         ++A       +    
Sbjct: 63  LREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEPHP 122

Query: 126 ----------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
                       +         G+        A  L       E++     + +  A D 
Sbjct: 123 RPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLSAVDR 182

Query: 173 CVYTNHNIVLETLKVGD 189
              +    V+  +   D
Sbjct: 183 DALSGWGAVVNIINYSD 199


>gi|316969250|gb|EFV53378.1| proteasome subunit beta type-7 [Trichinella spiralis]
          Length = 270

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 30/208 (14%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKD-----------GVVVIAGDGQVSLGQTVMKANARKV 49
           ++ MG K    +   TTI  +  D             +VI  D + + G  +        
Sbjct: 26  LLKMGFKPPQCRSTGTTIAGLVYDYCVHICCKLLKDGIVIGADSRATSGNII-------- 77

Query: 50  RRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRN 105
               K  +    +G++AD   L   L   +E       R    +A        + K++  
Sbjct: 78  --GDKYCMNMCGSGTAADLDQLAHLLSANMELLKLTTERKPRGVAAVRIARQHLFKHMGY 135

Query: 106 LEAMILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEE 160
           + A ++IA  D T   + +        ++  +A GSG   A            +   A +
Sbjct: 136 IGAYVIIAGTDFTGPFLYSVHAHGSSIKDNYLADGSGCLAAYGVLETNFKLNMTLDEALD 195

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVG 188
           + ++A+       V + +      LK  
Sbjct: 196 LLKRALIAGMAADVNSGNTYTFAILKKN 223


>gi|164422783|ref|XP_963776.2| proteasome component C5 [Neurospora crassa OR74A]
 gi|157069819|gb|EAA34540.2| proteasome component C5 [Neurospora crassa OR74A]
          Length = 265

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 60/221 (27%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
            +      +  + L +      ++AGD +++ G ++      K+ ++G          I+
Sbjct: 33  HRFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQKDATIV 92

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+   + Y  +  +     A   R+   L             + 
Sbjct: 93  LSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILG 152

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSA 158
            +         +             A G+  S  +      ++                 
Sbjct: 153 GLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGSGVGHALQE 212

Query: 159 EE-----------IARKAMSIAADICVYTNHNIVLETLKVG 188
            E           + + A   A +  +     + +  +   
Sbjct: 213 RERKPLTRSEGEVLVKDAFDGAVERHIEVGDGLQMMVITKD 253


>gi|125538349|gb|EAY84744.1| hypothetical protein OsI_06114 [Oryza sativa Indica Group]
 gi|125581051|gb|EAZ21982.1| hypothetical protein OsJ_05637 [Oryza sativa Japonica Group]
          Length = 213

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + ++V ++     I G +G + DA
Sbjct: 11  QIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYI-GLSGLATDA 69

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R     A    +   L                  D     +
Sbjct: 70  QTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 129

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++       EE+     +A+  + D  
Sbjct: 130 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRD 186


>gi|255725804|ref|XP_002547828.1| proteasome component PRE3 precursor [Candida tropicalis MYA-3404]
 gi|240133752|gb|EER33307.1| proteasome component PRE3 precursor [Candida tropicalis MYA-3404]
          Length = 212

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V+ D  V++A D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVKFDKGVILAADSRTTTGTYIANRVTDKLTQIHDTIYCC-RSGSAADTQAIADI 77

Query: 75  LEKKLEQYPNQLLRSSVELAK------DWRMDKYLRNLEAMILIAD----KTITLVITGM 124
           ++  L+ Y +QL        K               NL A I++A          V +  
Sbjct: 78  VKYYLQLYSSQLPNGEQPETKIAANVFQELCYNNKDNLTAGIIVAGYDKKTDSGSVFSVP 137

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIA 169
                 E+    +GSG +Y          +  S   A E   +A++ A
Sbjct: 138 IGGSIHESEYAIVGSGSTYIYGLCDKNFKSGMSKEDAVEFVIQALTEA 185


>gi|119467908|ref|XP_001257760.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
 gi|119405912|gb|EAW15863.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
          Length = 261

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 65/219 (29%), Gaps = 38/219 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD +   G  +      KV ++G         +I+
Sbjct: 29  HSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGAHIL 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L               
Sbjct: 89  LSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILA 148

Query: 114 --DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
             D+     + +             A GS  S  +      ++ +N              
Sbjct: 149 GLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHALEP 208

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLK 186
                    + E++ R A + A +  +     + +  + 
Sbjct: 209 KKAEPLPRATVEQLVRDAFTSAVERHIEVGDGLQMMVIT 247


>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 272

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 62/206 (30%), Gaps = 27/206 (13%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           V          +  +IL +      +IAGD + S G ++    ARKV +L    ++A   
Sbjct: 19  VQHHGFNPYSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLAT-N 77

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-- 120
           G +AD    ++R++++LE Y +   ++    +    +   L             +  +  
Sbjct: 78  GFAADGNNFVKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEE 137

Query: 121 ------ITGMGDVLEPENGVMAIGSGGSYALSAAR-ALMSTQNSAE-------------- 159
                  +             A G+  S         +       E              
Sbjct: 138 DGSGAVYSFDPVGSYEREACRAAGAAQSLIQPFLDNQVYFKNQQPEPGAAPFVPGNLPLS 197

Query: 160 ---EIARKAMSIAADICVYTNHNIVL 182
               +   + + A +  +     + +
Sbjct: 198 TVLSLVVDSFTSATERHIEVGDGMEI 223


>gi|146416491|ref|XP_001484215.1| hypothetical protein PGUG_03596 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 217

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 13/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGSYIANRVTDKLTQIHDTIYCC-RSGSAADTQAIADI 77

Query: 75  LEKKLEQYPNQL---LRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMG 125
           ++  ++ Y +QL    + + ++A +       K   NL A I+ A    K    V     
Sbjct: 78  VKYYMQIYTSQLPHDEKPTTQIAANIFQELCYKNKDNLTAGIICAGYDEKNKGTVYLIPI 137

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVL 182
                +      GSG ++               +E     + A+S A      +   I +
Sbjct: 138 GGSIHQQEYAIAGSGSTFIYGWCNENYKKDMEKDECVSFIKTALSEAIKWDGSSGGVIRM 197

Query: 183 ETLKVG 188
             L   
Sbjct: 198 VVLTAD 203


>gi|312377502|gb|EFR24316.1| hypothetical protein AND_11170 [Anopheles darlingi]
          Length = 317

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 21/183 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V  DG VVI  D + S G  V      K+ +L    I    +GS+AD   + + +   
Sbjct: 1   MAVEFDGGVVIGADSRTSTGTYVANRVTDKLTKLTD-KIYCCRSGSAADTQAIADIVAYS 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL-VITGMGDVLEPE 131
           L+ + NQ     +         KY     + ++        D+     V +     ++  
Sbjct: 60  LDYHENQTGEEPLVEDAANEFRKYCYEYRSSLVAGIIVAGWDRKHGGQVYSIPLGGMQIR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA-------ADIC---VYTNH 178
             V   GSG SY     +             E  +KA+  A         +C   + T  
Sbjct: 120 QSVTIGGSGSSYIYGFVKENYREGMPRDECVEFVKKAVFHAMYHDGSSGGVCRIGIITKD 179

Query: 179 NIV 181
            + 
Sbjct: 180 GVE 182


>gi|169769577|ref|XP_001819258.1| proteasome subunit beta type-4 [Aspergillus oryzae RIB40]
 gi|83767117|dbj|BAE57256.1| unnamed protein product [Aspergillus oryzae]
          Length = 260

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 25/200 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G      + +++R  G  + + GF+G  +D   +   
Sbjct: 40  GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRVFGD-SAVVGFSGDVSDMQYIDRL 98

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD--------KTITLVITG 123
           LE   + +  +              + K  Y R  E   L                + + 
Sbjct: 99  LESLDIRENYSTHGNMMNAKNLHTYLSKVLYKRRSEFNPLWNHILVAGFDEDKKPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAM---------SIAA 170
                      +A G G   A+   R L   +   EEI    A  A+           A 
Sbjct: 159 DLLGTTYSAPHLATGFGAHLAIPILRRLFPEEKPLEEISKGEAEAALRECLKVLWYRDAR 218

Query: 171 DICVYTNHNIVLETLKVGDE 190
            +  Y+   I  E +++ ++
Sbjct: 219 SLDKYSIAVITAEGVEIKED 238


>gi|49388033|dbj|BAD25149.1| Proteasome subunit beta type 3 [Oryza sativa Japonica Group]
 gi|215768995|dbj|BAH01224.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 204

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + ++V ++     I G +G + DA
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYI-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R     A    +   L                  D     +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++       EE+     +A+  + D  
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRD 177


>gi|149245900|ref|XP_001527420.1| proteasome component PRE3 precursor [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449814|gb|EDK44070.1| proteasome component PRE3 precursor [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 223

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGSYIANRVTDKLTQIHDTIYCC-RSGSAADTQAVADM 77

Query: 75  LEKKLEQYPNQL---LRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMG 125
           ++  L+ Y  QL    + +  +A +           NL A I+ A   DK    V +   
Sbjct: 78  VKYYLQIYSAQLPYGKKPTTNIAANVFQEICYNNKDNLTAGIICAGYDDKYGGSVYSIPI 137

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVL 182
                +      GSG ++               +E       A++ A      +   I +
Sbjct: 138 GGSIHKQEYAIAGSGSTFIYGWCNENYKPNMEKQETVEFIQTALAEAIKWDGSSGGVIRM 197

Query: 183 ETLKV 187
             L  
Sbjct: 198 VILTK 202


>gi|261201302|ref|XP_002627051.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
 gi|239592110|gb|EEQ74691.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
 gi|239611727|gb|EEQ88714.1| proteasome component C5 [Ajellomyces dermatitidis ER-3]
 gi|327348257|gb|EGE77114.1| proteasome component C5 [Ajellomyces dermatitidis ATCC 18188]
          Length = 266

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 67/223 (30%), Gaps = 40/223 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-------II 58
                   +  + L +      ++AGD +   G  +    A K+ ++G+ N       ++
Sbjct: 32  HGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEDNEGGEGAHLV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMIL 111
               G +AD   L ERL+  ++ Y  +  +     A   R+   L         + A++ 
Sbjct: 92  LSVVGFAADGRALKERLDAIVKMYKYRHGKPMSVKACAQRLATILYSKRFFPYYVHAILA 151

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNS- 157
             D+     + +             A G+  S  +      ++                 
Sbjct: 152 GIDEEGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQFIPGSGEGNAMDK 211

Query: 158 ------------AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                       A ++ + A + A +  +     + +  +   
Sbjct: 212 QPREPVPPPRDVALQLVKDAFTSAVERHIEVGDGLQVMVITTE 254


>gi|114626640|ref|XP_001141010.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 7 isoform 3 [Pan troglodytes]
          Length = 211

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 14/159 (8%)

Query: 41  VMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD 100
           V   N  K+  +       G AG++AD     + +   LE +     R    +  +  + 
Sbjct: 3   VADKNCSKIHFISPNIYCCG-AGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLK 61

Query: 101 KYLRNLEAMILIA------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
           + L   +  I  A      D T   + +        +   + +GSG   A++        
Sbjct: 62  QMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRP 121

Query: 155 QNSAEE---IARKAMSIAADI--CVYTNHNIVLETLKVG 188
               EE   +  +A  IAA I   + +  NI L  +   
Sbjct: 122 DMEEEEAKNLVSEA--IAAGIFNDLGSGSNIDLCVISKN 158


>gi|322800746|gb|EFZ21650.1| hypothetical protein SINV_15015 [Solenopsis invicta]
          Length = 218

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 59/193 (30%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  + +K+  +G    ++   G + D 
Sbjct: 15  SILAYNGGAVIAMKGKNCVAIAADRRFGIQAQTIMCDFQKIYEMGPHLYVS-LPGLATDT 73

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELA-----KDWRMDKYLRNLEAMILIADKTI----TL 119
            T++ERL  +L  Y  +  R            +   +K         ++A          
Sbjct: 74  QTVMERLRFRLNLYELKENRKIHPKTFTAMISNLLYEKRFGPYFVEPIVAGLDPVTFEPF 133

Query: 120 VITGMGDVLE-PENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVY 175
           +               +  G+          +L        E+     +A+  A D    
Sbjct: 134 ICNMDLIGSRNMAEDFVVGGTCTEQLYGMCESLYEPNLEPTELFETVSQALVNAFDRDAI 193

Query: 176 TNHNIVLETLKVG 188
           +    V+  ++  
Sbjct: 194 SGWGAVVYIIEKD 206


>gi|301110580|ref|XP_002904370.1| proteasome subunit beta type-3, putative [Phytophthora infestans
           T30-4]
 gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans
           T30-4]
          Length = 204

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 57/192 (29%), Gaps = 13/192 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ +     V IA D ++ +    +  + +KV R+     + G AG + D 
Sbjct: 2   SILSYNGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFL-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-----NLEAMILIAD---KTITLV 120
            ++ + L+ K+  Y     R          +   +            +IA         +
Sbjct: 61  QSVSQLLKFKINMYKMNEERDIKPKTLSALLSNMMYEKRFGPWFVEPVIAGLTEDNKPFL 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYT 176
            +             +  G+          ++       E++     + +  A +    +
Sbjct: 121 SSMDCLGCEMMTKDFVVAGTMEEALYGMCESMYKPDMEEEDLFETLSQCLLSACNRDALS 180

Query: 177 NHNIVLETLKVG 188
               V+  +   
Sbjct: 181 GWGAVVHIITPK 192


>gi|146332701|gb|ABQ22856.1| proteasome subunit beta type 5 precursor-like protein [Callithrix
           jacchus]
          Length = 168

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 10/139 (7%)

Query: 54  KGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
              ++   AG +AD       L ++   Y  +        A    +   +   + M L  
Sbjct: 2   NPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSM 61

Query: 114 -------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IAR 163
                  DK    +     +         ++GSG  YA        S     EE   +AR
Sbjct: 62  GTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLAR 121

Query: 164 KAMSIAADICVYTNHNIVL 182
           +A+  A     Y+   + L
Sbjct: 122 RAIYQATYRDAYSGGAVNL 140


>gi|261403706|ref|YP_003247930.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
           vulcanius M7]
 gi|261370699|gb|ACX73448.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
           vulcanius M7]
          Length = 257

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 65/190 (34%), Gaps = 18/190 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +     VV+A D +++  + V   +  K+ ++ +    A     +     +  
Sbjct: 34  RGTTAVGITCKDGVVLAVDRRITS-KLVKIRSIEKIFQIDEHVAAATSGLVADARVLIDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            RLE ++ +       S   LAK     K                +I   D+    +   
Sbjct: 93  ARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDRNEARLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTN-HN 179
                  E    AIGSG    +           S +   E+A K+++ A +  +  N  N
Sbjct: 153 DPSGALIEYRATAIGSGRPVVMELLEKEYHDDISLDKGLELAIKSLAKANE-DI--NPEN 209

Query: 180 IVLETLKVGD 189
           + +  + V D
Sbjct: 210 VDVCVITVKD 219


>gi|18411547|ref|NP_565156.1| PBC2; peptidase/ threonine-type endopeptidase [Arabidopsis
           thaliana]
 gi|79321410|ref|NP_001031294.1| PBC2; peptidase/ threonine-type endopeptidase [Arabidopsis
           thaliana]
 gi|17380184|sp|O81153|PSB3B_ARATH RecName: Full=Proteasome subunit beta type-3-B; AltName: Full=20S
           proteasome beta subunit C-2
 gi|14326552|gb|AAK60320.1|AF385730_1 At1g77440/T5M16_3 [Arabidopsis thaliana]
 gi|3421109|gb|AAC32069.1| 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
 gi|19548049|gb|AAL87388.1| At1g77440/T5M16_3 [Arabidopsis thaliana]
 gi|332197856|gb|AEE35977.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
 gi|332197857|gb|AEE35978.1| proteasome subunit beta type-3-B [Arabidopsis thaliana]
          Length = 204

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++     I G +G + D 
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFI-GLSGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR--NLEAMILI------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L        +         D     +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  A+      AEE+     +A+  + D  
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRD 177


>gi|297845150|ref|XP_002890456.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|5263324|gb|AAD41426.1|AC007727_15 Identical to gb|Y13173 Arabidopsis thaliana mRNA for proteasome
           subunit. EST gb|T76747 comes from this gene
 gi|12744997|gb|AAK06878.1|AF344327_1 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
 gi|297336298|gb|EFH66715.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score = 82.7 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++    +  G +G + D 
Sbjct: 2   QIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD-RVFIGLSGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L        +         D     +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  A+      AEE+     +A+  + D  
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRD 177


>gi|323336919|gb|EGA78176.1| Pre3p [Saccharomyces cerevisiae Vin13]
          Length = 187

 Score = 82.7 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 10/178 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     V++  D + + G  +      K+ R+         +GS+AD   + + ++  
Sbjct: 1   MAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAIADIVQYH 59

Query: 79  LEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMGDVLEPEN 132
           LE Y +Q    S E A         +   NL A I++A   DK    V T        + 
Sbjct: 60  LELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKL 119

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETLKV 187
                GSG ++             S EE     + ++S A      +   I +  L  
Sbjct: 120 PYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLDS 177


>gi|115395784|ref|XP_001213531.1| proteasome component PRE3 precursor [Aspergillus terreus NIH2624]
 gi|114193100|gb|EAU34800.1| proteasome component PRE3 precursor [Aspergillus terreus NIH2624]
          Length = 251

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 51/182 (28%), Gaps = 11/182 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +     V++  D + + G  +      K+ ++         +GS+AD   + + + 
Sbjct: 51  TSMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVS 109

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDVLE 129
             L  Y      +           +     + M+                V +       
Sbjct: 110 YHLNMYAIVNNEAPSTQVAASLFQELCYENKDMLSAGIIIAGYDPRHGGQVYSIPLGGSL 169

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLK 186
            +      GSG +Y      A      + EE     R A+  A      +   I +  L 
Sbjct: 170 HKQAYSIGGSGSTYIYGYCDANWRENMTEEEGIQFVRSALQEAIKWDGSSGGVIRMVVLT 229

Query: 187 VG 188
             
Sbjct: 230 AK 231


>gi|238488108|ref|XP_002375292.1| proteasome component Pre4, putative [Aspergillus flavus NRRL3357]
 gi|220700171|gb|EED56510.1| proteasome component Pre4, putative [Aspergillus flavus NRRL3357]
          Length = 260

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 25/200 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G      + +++R  G  + + GF+G  +D   +   
Sbjct: 40  GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRVFGD-SAVVGFSGDVSDMQYIDRL 98

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD--------KTITLVITG 123
           LE   + +  +              + K  Y R  E   L                + + 
Sbjct: 99  LESLDIRENYSTHGNMMNAKNLHTYLSKVLYKRRSEFNPLWNHILVAGFDEDKKPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAM---------SIAA 170
                      +A G G   A+   R L   +   EEI    A  A+           A 
Sbjct: 159 DLLGTTYSAPHLATGFGAHLAIPILRRLFPEEKPLEEISKGEAEAALRECLKVLWYRDAR 218

Query: 171 DICVYTNHNIVLETLKVGDE 190
            +  Y+   I  E +++ ++
Sbjct: 219 SLDKYSIAVITAEGVEIKED 238


>gi|239788857|dbj|BAH71087.1| ACYPI000065 [Acyrthosiphon pisum]
          Length = 176

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 1/107 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G +V+A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 71  HGTTTLGFLYQGGIVLAVDSRATGGQYIGSQCMKKIVEINDF-MLGTLAGGAADCVYWDR 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            L K+   +  +        A    M   +   +   L      + +
Sbjct: 130 VLSKQCRLHELRNKERISVTAASKIMSNMIYYYKGYGLSIGNDASWI 176


>gi|18395025|ref|NP_564149.1| PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type
           endopeptidase [Arabidopsis thaliana]
 gi|288558823|sp|Q9XI05|PSB3A_ARATH RecName: Full=Proteasome subunit beta type-3-A; AltName: Full=20S
           proteasome beta subunit C-1; AltName: Full=Proteasome
           component T
 gi|17473525|gb|AAL38246.1| proteasome subunit [Arabidopsis thaliana]
 gi|21387087|gb|AAM47947.1| proteasome subunit [Arabidopsis thaliana]
 gi|110740894|dbj|BAE98543.1| 20S proteasome beta subunit PBC2 like protein [Arabidopsis
           thaliana]
 gi|332192025|gb|AEE30146.1| proteasome subunit beta type-3-A [Arabidopsis thaliana]
          Length = 204

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++    +  G +G + D 
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD-RVFIGLSGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L        +         D     +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  A+      AEE+     +A+  + D  
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRD 177


>gi|302662910|ref|XP_003023105.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
 gi|291187083|gb|EFE42487.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
          Length = 212

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 56/201 (27%), Gaps = 14/201 (6%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M V    +  V       + +     V IA D ++ L    +     K+        + G
Sbjct: 1   MTVFLHTNSYVLPDGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYL-G 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADK 115
             G + D  T+ + L  K+  Y  +  R+         +      K         ++A  
Sbjct: 60  LTGLATDVNTVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGI 119

Query: 116 TI----TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMS 167
                   +        ++     +  G+          +L       E++     +A+ 
Sbjct: 120 NHTTGKPFICGFDSIGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALL 179

Query: 168 IAADICVYTNHNIVLETLKVG 188
            A D    +     +  ++  
Sbjct: 180 NAVDRDALSGWGAYVYIIEKD 200


>gi|258564394|ref|XP_002582942.1| proteasome component PRE3 [Uncinocarpus reesii 1704]
 gi|237908449|gb|EEP82850.1| proteasome component PRE3 [Uncinocarpus reesii 1704]
          Length = 244

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 53/184 (28%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 43  GTSIMAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP---- 130
           +   L  Y     +            +   + + M+              G V       
Sbjct: 102 VRYHLGMYGVVYDQPPTTQTAAALFQELCYDNKDMLSAGIIIAGYDHRHGGQVYSIPLGG 161

Query: 131 ---ENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLET 184
              +      GSG +Y      A      S     E  + A+  A      +   I L  
Sbjct: 162 SLHKQAYAIGGSGSTYIYGYCDAHWREGMSEAEGVEFVKGALQEAIKWDGSSGGVIRLVV 221

Query: 185 LKVG 188
           L   
Sbjct: 222 LTAK 225


>gi|289621343|emb|CBI52126.1| unnamed protein product [Sordaria macrospora]
          Length = 265

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 30/205 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+A D   S G      + +++R     ++I GF+G  +D   L   
Sbjct: 40  GTSVIAIKYKDGVVMAADNLASYGSLARFPDVKRLRVFLDSSVI-GFSGDVSDMQFLDRH 98

Query: 75  LEK----KLEQYPNQLLRS----SVELAKDWRMDKYLRNLEAMILIA--------DKTIT 118
           L +    +  + P+   ++    +  L K  +   Y R  +   L            +  
Sbjct: 99  LTELSIDEAYEDPSSDSKAGQLNAANLHKYLQKLLYKRRNDFDPLWNQLLIAGFDGDSKP 158

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEIARKAMSI-- 168
            + +         +  +A G G + A    R   +T+          A E+ ++ M +  
Sbjct: 159 YLASVDLRGTSFTSPSLATGFGSALAQPIMRRYAATEEDAARLSREEAVEVVKECMKVLY 218

Query: 169 ---AADICVYTNHNIVLETLKVGDE 190
              A  +  Y+   +  E +++ ++
Sbjct: 219 YRDARSLDRYSIAVVTKEGVELKED 243


>gi|38047537|gb|AAR09671.1| similar to Drosophila melanogaster Prosbeta5 [Drosophila yakuba]
          Length = 161

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 45/145 (31%), Gaps = 10/145 (6%)

Query: 54  KGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
              ++   AG +AD       L K+   +  +        A    M       + M L  
Sbjct: 2   NQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSM 61

Query: 114 -------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIAR 163
                  DK    +     +       + ++GSG  YA     +          A+E+ R
Sbjct: 62  GMMLAGFDKRGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDEEAQELGR 121

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
           +A+  A     Y+   I +  +K  
Sbjct: 122 RAIYHATFRDAYSGGIIRVYHIKED 146


>gi|294655964|ref|XP_458199.2| DEHA2C12034p [Debaryomyces hansenii CBS767]
 gi|199430751|emb|CAG86275.2| DEHA2C12034p [Debaryomyces hansenii]
          Length = 217

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 65/186 (34%), Gaps = 13/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 19  GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTQIHDTIYCC-RSGSAADTQAVADI 77

Query: 75  LEKKLEQYPNQL---LRSSVELAKDW---RMDKYLRNLEAMILIAD---KTITLVITGMG 125
           ++  L+ Y +QL    + + ++A +            L A I+ A    +    V +   
Sbjct: 78  VKYHLQVYSSQLPNNEKPTTKVAANVFQELCYNNKDGLTAGIICAGYDKQNKGSVYSIPI 137

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVL 182
                +      GSG ++           +   ++     + A+S A      +   I +
Sbjct: 138 GGSIHQQDYAIAGSGSTFIYGWCNENYKPEMEKDDCVQFIKTALSEAIKWDGSSGGVIRM 197

Query: 183 ETLKVG 188
             L   
Sbjct: 198 VILTEK 203


>gi|146332395|gb|ABQ22703.1| proteasome subunit beta type 5 precursor-like protein [Callithrix
           jacchus]
          Length = 164

 Score = 82.3 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 10/135 (7%)

Query: 58  IAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---- 113
           +   AG +AD       L ++   Y  +        A    +   +   + M L      
Sbjct: 2   LGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMI 61

Query: 114 ---DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
              DK    +     +         ++GSG  YA        S     EE   +AR+A+ 
Sbjct: 62  CGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIY 121

Query: 168 IAADICVYTNHNIVL 182
            A     Y+   + L
Sbjct: 122 QATYRDAYSGGAVNL 136


>gi|226471338|emb|CAX70750.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
           japonicum]
          Length = 178

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 9/152 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARKVRRLGKGNIIAGFAGSS 65
                  +  T++ +  +   +IA D ++  G  V+   N  ++ +LG GN++ G AG  
Sbjct: 1   MFNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGCGNVL-GCAGFH 59

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM--DKYLRNLEAMILIA-----DKTIT 118
            D  TL + LE K++ Y     +     A    +    Y R      +       D    
Sbjct: 60  GDVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGDRG 119

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
           ++ +          G  A GS  +       +
Sbjct: 120 VLYSYDPVGSYEAEGYRASGSSAAILQPFLDS 151


>gi|167041854|gb|ABZ06595.1| hypothetical protein ALOHA_HF4000097M14ctg1g39 [uncultured marine
          microorganism HF4000_097M14]
          Length = 80

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 3/83 (3%)

Query: 4  MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
          M +       H TTI+ +RKD  VV+AGDGQVSLG TV+K+ A KVR++ K N+IAGFAG
Sbjct: 1  MNNNSN---WHGTTIVLIRKDKDVVVAGDGQVSLGNTVIKSTANKVRKIEKRNVIAGFAG 57

Query: 64 SSADAFTLLERLEKKLEQYPNQL 86
          S+ADAFTL ERLE KLE++   +
Sbjct: 58 STADAFTLFERLEAKLEKHAGNV 80


>gi|315045460|ref|XP_003172105.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
 gi|311342491|gb|EFR01694.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
          Length = 212

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 52/187 (27%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + +     V IA D ++ L    +     K+        + G  G + D  T+ + 
Sbjct: 15  GGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYL-GLTGLATDVNTVSQL 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTI----TLVITGMG 125
           L  K+  Y  +  R+         +      K         ++A          +     
Sbjct: 74  LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIV 181
              ++     +  G+          +L       E++     +A+  A D    +     
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 193

Query: 182 LETLKVG 188
           +  ++  
Sbjct: 194 VYIIEKD 200


>gi|302501602|ref|XP_003012793.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
 gi|291176353|gb|EFE32153.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
          Length = 212

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 52/187 (27%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + +     V IA D ++ L    +     K+        + G  G + D  T+ + 
Sbjct: 15  GGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYL-GLTGLATDVNTVSQL 73

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTI----TLVITGMG 125
           L  K+  Y  +  R+         +      K         ++A          +     
Sbjct: 74  LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 133

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIV 181
              ++     +  G+          +L       E++     +A+  A D    +     
Sbjct: 134 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 193

Query: 182 LETLKVG 188
           +  ++  
Sbjct: 194 VYIIEKD 200


>gi|164660346|ref|XP_001731296.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
 gi|159105196|gb|EDP44082.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
          Length = 201

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 13/190 (6%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++ +  +++ +     V IA D ++     ++     KV R+     + G  G + D  T
Sbjct: 1   MEYNGGSVIAMTGKNCVAIASDLRLGNQALLLSTQFDKVFRMTDRTYV-GLPGLATDVAT 59

Query: 71  LLERLEKKLEQYPNQLLRSSVE--LAKDWRMDKYLRNLEAMIL------IADKTITLVIT 122
           L E+   +L  Y  +  R       AK      Y R      +      +       +  
Sbjct: 60  LREKFRYRLNMYRMKEDRDIEPETFAKLMSSTLYERRFGPYFIEPVVAGMNSNNEPFIAA 119

Query: 123 GMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNH 178
                 L      +  G+        A  L       E++     + M    +    +  
Sbjct: 120 SDLIGCLNFAKDFVVSGTASDRLFGMAEGLWEPDLEPEDLFETISQTMLGGIERDALSGM 179

Query: 179 NIVLETLKVG 188
            +++  +   
Sbjct: 180 GVIVRIITPD 189


>gi|323455949|gb|EGB11816.1| hypothetical protein AURANDRAFT_52186 [Aureococcus anophagefferens]
          Length = 236

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 64/208 (30%), Gaps = 35/208 (16%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG V++  D +VS G  +    + KV  L    I    +GS+AD   + + 
Sbjct: 21  GTTIMAVAYDGGVIMGADSRVSTGTYIANRVSDKVSHLHD-KIFMCRSGSAADTQAVSDY 79

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL---------IADKTITLVITGMG 125
           +   L  +  ++ +  +         +     +  +L          AD     VI   G
Sbjct: 80  VRHYLGSHAIEVGKPPLVKTAANLAKRICYTNKEQLLAGVIVAGHDDADGGSVYVIPLGG 139

Query: 126 DVLEP----------------------ENGVMAIGSGGSYALSAARALMSTQNSAEEI-- 161
               P                      +      GSG +Y             S  E   
Sbjct: 140 ARPRPPFAFSARARRRRRRRAAAGTCLKVPFAIGGSGSTYIYGHVDHTYKPNMSLAECKV 199

Query: 162 -ARKAMSIAADICVYTNHNIVLETLKVG 188
             ++A++ A      +   I L  +   
Sbjct: 200 FVKEAVTRAMCRDGSSGGIIRLVCINAD 227


>gi|170030525|ref|XP_001843139.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
 gi|167867380|gb|EDS30763.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
          Length = 205

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 53/196 (27%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  +  K+  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKIFEINPHMYL-GLVGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL  +   Y  +  R          +  +L               ++        
Sbjct: 61  LTVHQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFI---EPVIAGLDPKSY 117

Query: 129 EP-------------ENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI 172
           EP              N  +  G+           L           E+  +A+  A D 
Sbjct: 118 EPFICNMDLIGCPNKPNDFVVAGTCAEQLYGMCETLWKPDLEPTALFEVISQALVNAFDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +     +  ++  
Sbjct: 178 DAISGWGATVYIIEKE 193


>gi|2511576|emb|CAA73620.1| multicatalytic endopeptidase [Arabidopsis thaliana]
          Length = 218

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 14/169 (8%)

Query: 33  GQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVE 92
            + + G  V   N  K+  +       G AG++AD   + + +  +L  +  Q  R S  
Sbjct: 1   TRATEGPIVADKNCEKIHYMAPNIYCCG-AGTAADTEAVTDMVSSQLRLHRYQTGRDSRV 59

Query: 93  LAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
           +     + K+L + +        +   D T   + T              +GSG   A+S
Sbjct: 60  VTALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMS 119

Query: 147 AARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLETLKVGDE 190
              A      + +E   +  +A  I + I   + +  N+ +  +  G +
Sbjct: 120 VFEAKYKEGLTRDEGIKLVAEA--ICSGIFNDLGSGSNVDICVITKGHK 166


>gi|322368956|ref|ZP_08043523.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
           paucihalophilus DX253]
 gi|320551687|gb|EFW93334.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
           paucihalophilus DX253]
          Length = 205

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 51/173 (29%), Gaps = 8/173 (4%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
           D  V++A D + SLG   +   A +  +          AG   D  + +  L  +   Y 
Sbjct: 18  DDEVLLAADRRASLGGRFVTNKAVQKVQGVHPTAALTMAGGVGDLQSYIRTLRAEASLYE 77

Query: 84  NQLLRSSVELAKDWRMDKYLRNL-----EAMILIADKTITLVITGMGDVLEPENGVMAIG 138
            +        A        LR       +  +   D+T   V          E    A G
Sbjct: 78  TRRGEPIDMAALSTLAGTLLREGPYRGAQPTLGGVDRTGPHVYDLDTAGGVMEADYHASG 137

Query: 139 SGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           SG   A                A  +A  A+  A +    + + + + T+   
Sbjct: 138 SGMQLAYGVLEREFEPNLPTDVARRVAANAIESAIERDTASGNGLTVATVSAD 190


>gi|256270206|gb|EEU05428.1| Pre3p [Saccharomyces cerevisiae JAY291]
          Length = 216

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 65/183 (35%), Gaps = 11/183 (6%)

Query: 15  ATTI-LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            T++ + V     V++  D + + G  +      K+ R+         +GS+AD   + +
Sbjct: 19  GTSMYMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAIAD 77

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMGDV 127
            ++  LE Y +Q    S E A         +   NL A I++A   DK    V T     
Sbjct: 78  IVQYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGG 137

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLET 184
              +      GSG ++             S EE     + ++S A      +   I +  
Sbjct: 138 SVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVV 197

Query: 185 LKV 187
           L  
Sbjct: 198 LTA 200


>gi|146323725|ref|XP_752084.2| proteasome component Pup3 [Aspergillus fumigatus Af293]
 gi|129557567|gb|EAL90046.2| proteasome component Pup3, putative [Aspergillus fumigatus Af293]
 gi|159125002|gb|EDP50119.1| proteasome component Pup3, putative [Aspergillus fumigatus A1163]
          Length = 192

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 54/181 (29%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ +    +  N  K+   G    + G  G + D  T+ + L  K+ 
Sbjct: 1   MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYL-GLTGLATDVNTVSDLLRYKVN 59

Query: 81  QYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTITLVITGMG-DVLEP 130
            Y  +  R  +   LA       Y R             + +      +        ++ 
Sbjct: 60  MYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L     S E++     +A+  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTASEQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWGAQVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|119501054|ref|XP_001267284.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
 gi|119415449|gb|EAW25387.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
          Length = 192

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 53/181 (29%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ +    +  N  K+   G    + G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYL-GLTGLATDVNTVSDLFRYKVN 59

Query: 81  QYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTITLVITGMG-DVLEP 130
            Y  +  R  +   LA       Y R             + +      +        ++ 
Sbjct: 60  MYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L     S E++     +A+  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLSPEDLFETISQALLSAVDRDALSGWGAQVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|195028618|ref|XP_001987173.1| GH21772 [Drosophila grimshawi]
 gi|193903173|gb|EDW02040.1| GH21772 [Drosophila grimshawi]
          Length = 225

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 60/181 (33%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTIL +  DG VVI  D + S    V    A K+ RL    I    +G++A    L + 
Sbjct: 13  GTTILAMEFDGGVVIGADSRTSCQYYVTNRVADKLTRLTD-KIYCCRSGAAAQTQELADN 71

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN----LEAMILIADKTITLVITGMGDVLE- 129
           +   L      L   ++      +    +      + A +++A           G  +  
Sbjct: 72  VASTLYSLELALGEPALVRDAAVQFRNRIYAARKTMLAGMIVAGWDQRQGGQVYGVPITG 131

Query: 130 --PENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
                     GSG ++      A          A  +AR A+ +A      T   I +  
Sbjct: 132 LLVREPCCVAGSGSTHVNGYLTAHYRPGMNQDEAVTLARNAVLMAIHHDCSTGGVIRIGV 191

Query: 185 L 185
           +
Sbjct: 192 I 192


>gi|115398103|ref|XP_001214643.1| proteasome component PUP3 [Aspergillus terreus NIH2624]
 gi|114192834|gb|EAU34534.1| proteasome component PUP3 [Aspergillus terreus NIH2624]
          Length = 192

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 54/181 (29%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ +    +  N  K+   G    + G  G + D  T+ + L  K+ 
Sbjct: 1   MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFL-GLTGLATDVSTVSDLLRYKVN 59

Query: 81  QYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTITLVITGMG-DVLEP 130
            Y  +  R  +   LA       Y R             +        +        ++ 
Sbjct: 60  MYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINYTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+          +L     S E++     +AM  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTASEQLFGTCESLYEQDLSPEDLFETISQAMLSAVDRDALSGWGAQVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|225709682|gb|ACO10687.1| Proteasome subunit beta type-6 precursor [Caligus rogercresseyi]
          Length = 228

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+L       V++A D + SLG  V+     K+  +    I+   +GS+A    + + 
Sbjct: 30  GTTLLACEYKDGVMLAADCRTSLGSLVVSRETDKLTPVSD-RILCCRSGSAAVTQAIAKA 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITL-VITGMGDV 127
           +   L+ Y   +  S+                   +         DK     V +     
Sbjct: 89  IRYNLDMYNVMMGESAPVETVAHLFKSICYEYRDSLTAGILVGGWDKVKGGQVYSIPMGG 148

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLET 184
           +    G  + GSG  Y  +   A  S   + EE  +   + ++ A +    +  +    +
Sbjct: 149 MCVRQGYASGGSGSVYLHAFMSANYSKDMNKEECKKMLIRGIASAVEFDGSSGGSCRWAS 208

Query: 185 LKVG 188
           +   
Sbjct: 209 ITKD 212


>gi|159110825|ref|XP_001705654.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
 gi|157433742|gb|EDO77980.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
          Length = 207

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 55/189 (29%), Gaps = 12/189 (6%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + + + ++ ++    V +A D ++      +     +       + + G AG   D  T 
Sbjct: 6   EYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTT 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVIT 122
             ++  K   Y  Q  R     A    +  +L                  AD    L   
Sbjct: 66  YRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAM 125

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHN 179
                L+        G+   + L      +    S +EI     + +  A +   Y+   
Sbjct: 126 DTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWG 185

Query: 180 IVLETLKVG 188
             +  L+  
Sbjct: 186 AHVVVLRRD 194


>gi|332372981|gb|AEE61632.1| unknown [Dendroctonus ponderosae]
          Length = 217

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+    +G VVI  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 17  GTSIMAAEFEGGVVIGADSRTTTGAYIANRVTDKLTKISDHIYCC-RSGSAADTQAIADI 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGDV 127
           +  +L  +  +L                   Y  +L A IL+A         V +     
Sbjct: 76  VSYQLSFHGMELGEEPQVEVGANIFKELCYNYRDSLTAGILVAGWDKQKGGQVYSIPIGG 135

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +     V   GSG SY      A      S EE        +++A      +   + L  
Sbjct: 136 MCVRQAVSIGGSGSSYVYGYVDANYKLNMSQEECVNFVLNTLTLAIARDGSSGGVVRLGI 195

Query: 185 LKVG 188
           +   
Sbjct: 196 ITEK 199


>gi|119467912|ref|XP_001257762.1| proteasome component Pre4, putative [Neosartorya fischeri NRRL 181]
 gi|119405914|gb|EAW15865.1| proteasome component Pre4, putative [Neosartorya fischeri NRRL 181]
          Length = 260

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 73/200 (36%), Gaps = 25/200 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V +A D   S G     ++ +++R  G+  +I GF+G  +D   +   
Sbjct: 40  GTSVVAVKFNGGVAVAADNLASYGSLARFSDVKRLRVFGESAVI-GFSGDVSDMQHIDRL 98

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           LE   + +  +    +         + K  Y R  E   L                + + 
Sbjct: 99  LESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPLWNQVLVAGFDGNNQPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK----AMS---------IAA 170
                      +A G G   A+   R L   + + EEI ++    A+           A 
Sbjct: 159 DLLGTTFSAPHLATGFGAHLAIPILRRLFPDEKTVEEITKEEAVNALKECLKVLWYRDAR 218

Query: 171 DICVYTNHNIVLETLKVGDE 190
            +  ++   I  E +++ ++
Sbjct: 219 SLDKFSLAVITKEGVEMHED 238


>gi|58258585|ref|XP_566705.1| proteasome subunit beta type 3 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57222842|gb|AAW40886.1| proteasome subunit beta type 3, putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 210

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 58/196 (29%), Gaps = 19/196 (9%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++++  +++ +     V IA D ++   Q  + AN  KV  +    +  G  G + D +T
Sbjct: 4   MELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPI-NDKLYCGLPGLATDVYT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTITLVITGMG 125
           L E L  ++  Y  +  R          +      K         ++A       +    
Sbjct: 63  LREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLPTPTSLEPHP 122

Query: 126 ----------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
                       +         G+        A  L       E++     + +  A D 
Sbjct: 123 RPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLSAVDR 182

Query: 173 CVYTNHNIVLETLKVG 188
              +    V+  +   
Sbjct: 183 DALSGWGAVVNIITHD 198


>gi|320586233|gb|EFW98912.1| proteasome component [Grosmannia clavigera kw1407]
          Length = 265

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 61/221 (27%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL-------GKGNII 58
            +      +  T L +      ++AGD + + G ++    + KV ++           I+
Sbjct: 33  HRFDPYTDNGGTTLAIAGADFAIVAGDTRHTAGYSINSRFSPKVFKIGGSTADQHDARIV 92

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+   + Y  +  +     A   R+   L             + 
Sbjct: 93  LSVVGFAADGEALKERLDTICKMYRYRHGKPISVNACAKRLSTILYQKRFFPYYTHAILG 152

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
            +         +             A G+  S         ++                 
Sbjct: 153 GLDEDGIGAIYSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVPGSGIGHDLME 212

Query: 154 ------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                  +N  EE+ + A   A +  +     + +  +   
Sbjct: 213 RPRVPLPRNDVEELVKDAFDGAVERHIEVGDYLQMLVVTKD 253


>gi|115400894|ref|XP_001216035.1| proteasome component C5 [Aspergillus terreus NIH2624]
 gi|114189976|gb|EAU31676.1| proteasome component C5 [Aspergillus terreus NIH2624]
          Length = 261

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 63/221 (28%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD +   G  +      KV ++G          I+
Sbjct: 29  HSFYPYTDNGGSTLGITGADFAILAGDTRSVAGYNINTRYDPKVFKIGGDDETGEGAQIL 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA----- 113
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L               
Sbjct: 89  LSVVGFAADGHALKERLDAVVKMYKYQHGKPMSVTACAQRLSTILYQKRFFPYYVHAILA 148

Query: 114 --DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
             D+     + +             A GS  S  +      ++ +N              
Sbjct: 149 GLDEDGKGALYSYDPVGSYEREQCRAAGSAASLIMPFLDNQVNFKNQYIPGSGEGHALEP 208

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                    + E + R A + A +  +     + +  +   
Sbjct: 209 KKPEPLPRATVERLVRDAFTSAVERHIEVGDGLQMMVITRD 249


>gi|323347907|gb|EGA82167.1| Pre3p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 187

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 62/176 (35%), Gaps = 10/176 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     V++  D + + G  +      K+ R+         +GS+AD   + + ++  
Sbjct: 1   MAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAIADIVQYH 59

Query: 79  LEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMGDVLEPEN 132
           LE Y +Q    S E A         +   NL A I++A   DK    V T        + 
Sbjct: 60  LELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKL 119

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETL 185
                GSG ++             S EE     + ++S A      +   I +  L
Sbjct: 120 PYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVL 175


>gi|296805183|ref|XP_002843416.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
 gi|238844718|gb|EEQ34380.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
          Length = 223

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 51/187 (27%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + +     V IA D ++ L    +     K+        + G  G + D  T+ + 
Sbjct: 26  GGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYL-GLTGLATDVNTVSQL 84

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG--------- 125
           L  K+  Y  +  R+         +   L             +  +    G         
Sbjct: 85  LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFVCGFDS 144

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIV 181
              ++     +  G+          +L       E++     +A+  A D    +     
Sbjct: 145 IGCIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQALLNAVDRDALSGWGAY 204

Query: 182 LETLKVG 188
           +  ++  
Sbjct: 205 VYIIEKD 211


>gi|242399329|ref|YP_002994753.1| Proteasome subunit alpha [Thermococcus sibiricus MM 739]
 gi|259535090|sp|C6A459|PSA_THESM RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|242265722|gb|ACS90404.1| Proteasome subunit alpha [Thermococcus sibiricus MM 739]
          Length = 260

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 64/187 (34%), Gaps = 11/187 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+    VV+A + +V+  + +   +  K+ ++      A  G    +      
Sbjct: 35  RGATAVGVKCKDGVVLAVEKRVTS-KLIEPESYEKIFQIDDHIAAASSGIIADARVLVDR 93

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGM 124
                +       + +  +V + K   + +             A+++        +    
Sbjct: 94  ARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEKPELFETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY-TNHNIVLE 183
                 E   +AIGSG + A++        + + EE  + A+   + I    +  +I + 
Sbjct: 154 PSGAYFEWKAVAIGSGRNTAMAIFEEKYRDEMTLEEAIKLAVLALSKIMEEPSPESIEVA 213

Query: 184 TLKVGDE 190
            + V ++
Sbjct: 214 VISVKEK 220


>gi|322709180|gb|EFZ00756.1| proteasome component PRE3 precursor [Metarhizium anisopliae ARSEF
           23]
          Length = 197

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     V++  D + + G  +      K+ R+         +GS+AD   + + ++ +
Sbjct: 1   MAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDTIWCC-RSGSAADTQAVADIVQYQ 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLR----NLEAMILIADKTITL---VITGMGDVLEPE 131
           L  +     +  +         +        L A ++IA         V +        +
Sbjct: 60  LGLFAMHSGKPPMTQTAASIFQEICYANKDRLSAGLIIAGWDERFGGQVYSIPLGGSLHK 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A        EE     + A+  A      +   I +  L   
Sbjct: 120 QAYAIGGSGSTYIYGYCDANWKEGMEKEEAVNFVKGALREAIKWDGSSGGVIRMVVLTKE 179


>gi|170578154|ref|XP_001894290.1| proteasome subunit beta type 1 [Brugia malayi]
 gi|158599186|gb|EDP36871.1| proteasome subunit beta type 1, putative [Brugia malayi]
          Length = 258

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 56/202 (27%), Gaps = 23/202 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVS-LGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                   T   +  D   ++A D ++S     V+  +A K+  L    +++  AG   D
Sbjct: 45  NPYSFEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIHVLNDSIVLSC-AGFYGD 103

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------- 120
              L   LE +L +Y                + + L             +  +       
Sbjct: 104 ILQLKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGA 163

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNS---AEEIARKAM 166
             +             A GS     +      +              +   A  + + A 
Sbjct: 164 VFSYDPIGCIEHIAYTASGSAEPMIMPFFDCQIGLVTMSGDVEKPLLTIERATSLIKDAF 223

Query: 167 SIAADICVYTNHNIVLETLKVG 188
            +AA+  + T   I L   + G
Sbjct: 224 RVAAEREISTGDKIHLVIAEAG 245


>gi|476044|emb|CAA55591.1| proteasomal subunit Pre3 [Saccharomyces cerevisiae]
 gi|854572|emb|CAA60921.1| proteasome component pre3 [Saccharomyces cerevisiae]
 gi|207343916|gb|EDZ71228.1| YJL001Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|323304338|gb|EGA58111.1| Pre3p [Saccharomyces cerevisiae FostersB]
 gi|323354485|gb|EGA86324.1| Pre3p [Saccharomyces cerevisiae VL3]
 gi|741845|prf||2008180A peptidyl-Glu protease
          Length = 193

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 10/178 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     V++  D + + G  +      K+ R+         +GS+AD   + + ++  
Sbjct: 1   MAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAIADIVQYH 59

Query: 79  LEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIA---DKTITLVITGMGDVLEPEN 132
           LE Y +Q    S E A         +   NL A I++A   DK    V T        + 
Sbjct: 60  LELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKL 119

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHNIVLETLKV 187
                GSG ++             S EE     + ++S A      +   I +  L  
Sbjct: 120 PYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTA 177


>gi|308160496|gb|EFO62983.1| Proteasome subunit beta type 3 [Giardia lamblia P15]
          Length = 207

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 55/189 (29%), Gaps = 12/189 (6%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + + + ++ ++    V +A D ++      +     +       + + G AG   D  T 
Sbjct: 6   EYNGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDVLTT 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVIT 122
             ++  K   Y  Q  R     A    +  +L                  AD    L   
Sbjct: 66  YRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAM 125

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHN 179
                L+        G+   + L      +    S +EI     + +  A +   Y+   
Sbjct: 126 DTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWG 185

Query: 180 IVLETLKVG 188
             +  L+  
Sbjct: 186 AHVVILRRD 194


>gi|321249095|ref|XP_003191339.1| proteasome subunit beta type 3 [Cryptococcus gattii WM276]
 gi|317457806|gb|ADV19552.1| Proteasome subunit beta type 3, putative [Cryptococcus gattii
           WM276]
          Length = 210

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 58/197 (29%), Gaps = 19/197 (9%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           ++++  +++ +     V IA D ++   Q  + AN  KV  +    +  G  G + D +T
Sbjct: 4   MELNGGSVVAMIGKDCVAIASDLRLGNQQVGIAANFDKVFPI-NDKLYCGLPGLATDVYT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG----- 125
           L E L  ++  Y  +  R          +   L          +  +  + T        
Sbjct: 63  LREHLRFRVNMYRMKEEREITPKTFTHLLSSTLYEKRFGPFFLEPVVAGLTTPTPLEPHP 122

Query: 126 ----------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
                       +         G+        A  L       E++     + +  A D 
Sbjct: 123 KPYISTMDTIGCITTPKDFAVAGTAADKLYGIAEGLWEPDLEPEDLFETISQTLLNAVDR 182

Query: 173 CVYTNHNIVLETLKVGD 189
              +    V+  +    
Sbjct: 183 DALSGWGAVVNIITHDQ 199


>gi|38048467|gb|AAR10136.1| similar to Drosophila melanogaster Prosbeta5 [Drosophila yakuba]
          Length = 174

 Score = 81.6 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L  +  G V++A D + + G  +   + +K+  +    ++   AG +AD      
Sbjct: 72  HGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEI-NQFMLGTLAGGAADCVYWDR 130

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
            L K+   +  +        A    M       + M L   
Sbjct: 131 VLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMG 171


>gi|300120261|emb|CBK19815.2| unnamed protein product [Blastocystis hominis]
          Length = 205

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 17/196 (8%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               +  +   ++ ++    V IA D ++      +  N +K+ ++     I GF G  +
Sbjct: 1   MSDIMSYNGAAVIAMKGKNCVAIASDLRLGAQFQTVDCNFQKIYKMTDQIFI-GFNGLQS 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELA--KDWRMDKYLRNLEAMIL---------IADK 115
           DA T  + L  ++  Y  +  R     A     R  +Y        +           + 
Sbjct: 60  DAQTFAQLLTYEVNSYKLRENRDISPEAFGSLVRTKQYQHRWGPYFVEPVIAGLDKNGEP 119

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
            +  + T    +  P+       +          A        EE+     + +  + D 
Sbjct: 120 YVNAMDTIGAGIYTPK--FAISATCAESLYGTCEAFYKDNMEPEELFEVISQCLLASVDR 177

Query: 173 CVYTNHNIVLETLKVG 188
             Y+    ++  +   
Sbjct: 178 DAYSGWGGIVYIITPD 193


>gi|242064246|ref|XP_002453412.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
 gi|241933243|gb|EES06388.1| hypothetical protein SORBIDRAFT_04g005590 [Sorghum bicolor]
          Length = 204

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 56/177 (31%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + ++V ++     I G +G + DA
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYI-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D     +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNNEPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++       EE+     +A+  + D  
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQASVDRD 177


>gi|195564145|ref|XP_002077569.1| GD16019 [Drosophila simulans]
 gi|194202687|gb|EDX16263.1| GD16019 [Drosophila simulans]
          Length = 206

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V  DG VVI  D + S G  V      K+ R+    +    +GS+AD   + + +   
Sbjct: 1   MAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITD-KVYCCRSGSAADTQAIADIVAYS 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDVLEPE 131
           L  + NQ  + ++          Y  +    +L               V +     +   
Sbjct: 60  LNYHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQRGGQVYSIPLGGMLTR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG S+     R       + E+     +KA+  A      +   + +  +   
Sbjct: 120 EACTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRVGIITKD 179


>gi|326930546|ref|XP_003211407.1| PREDICTED: proteasome subunit beta type-7-like [Meleagris
           gallopavo]
          Length = 241

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 14/155 (9%)

Query: 45  NARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR 104
           N  K+  +       G AG++AD     + +   LE +     R    +  +  + + L 
Sbjct: 37  NCSKIHYISSNIYCCG-AGTAADTEMTTQLIASNLELHALSTGRLPRVVTANRMLKQMLF 95

Query: 105 NLEAMILIA------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA 158
             +  I  A      D T   + +        +   + +GSG   A++            
Sbjct: 96  RYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKYKPDMEE 155

Query: 159 EE---IARKAMSIAADI--CVYTNHNIVLETLKVG 188
           EE   + R A  IAA I   + +  NI +  +   
Sbjct: 156 EEAKQLVRDA--IAAGIYNDLGSGSNIDICVISKN 188


>gi|94468582|gb|ABF18140.1| 20S proteasome regulatory subunit beta type PSMB3/PUP3 [Aedes
           aegypti]
          Length = 205

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 55/205 (26%), Gaps = 24/205 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  +  KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYL-GLVGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITL 119
            T+ +RL  +   Y  +  R          +  +L          +              
Sbjct: 61  LTVHQRLLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVY 175
           +            N  +  G+           L       E   E+  +A+  A D    
Sbjct: 121 ICNMDLIGCPNMPNDFVVAGTCAEQLYGMCETLWKPDLEPEKLFEVISQALVNAFDRDAI 180

Query: 176 TN----------HNIVLETLKVGDE 190
           +             + ++ LK   +
Sbjct: 181 SGWGATVYIVEKDKLTVKKLKTRMD 205


>gi|322694306|gb|EFY86139.1| proteasome component PRE3 precursor [Metarhizium acridum CQMa 102]
          Length = 224

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     V++  D + + G  +      K+ R+         +GS+AD   + + ++ +
Sbjct: 28  MAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDTIWCC-RSGSAADTQAVADIVQYQ 86

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLR----NLEAMILIADKTITL---VITGMGDVLEPE 131
           L  +     +  +         +        L A ++IA         V +        +
Sbjct: 87  LGLFAMHSGKPPMTQTAASIFQEICYANKDRLSAGLIIAGWDERFGGQVYSIPLGGSLHK 146

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A        EE     + A+  A      +   I +  L   
Sbjct: 147 QAYAIGGSGSTYIYGYCDANWKEGMEKEEAVNFVKGALREAIKWDGSSGGVIRMVVLTKE 206


>gi|269972971|emb|CBE67030.1| CG11981-PA [Drosophila atripex]
 gi|269973424|emb|CBE66639.1| CG11981-PA [Drosophila ananassae]
 gi|269973426|emb|CBE66640.1| CG11981-PA [Drosophila ananassae]
 gi|269973428|emb|CBE66641.1| CG11981-PA [Drosophila ananassae]
 gi|269973430|emb|CBE66642.1| CG11981-PA [Drosophila ananassae]
 gi|269973432|emb|CBE66643.1| CG11981-PA [Drosophila ananassae]
 gi|269973434|emb|CBE66644.1| CG11981-PA [Drosophila ananassae]
 gi|269973436|emb|CBE66645.1| CG11981-PA [Drosophila ananassae]
 gi|269973438|emb|CBE66646.1| CG11981-PA [Drosophila ananassae]
 gi|269973440|emb|CBE66647.1| CG11981-PA [Drosophila ananassae]
 gi|269973442|emb|CBE66648.1| CG11981-PA [Drosophila ananassae]
 gi|269973444|emb|CBE66649.1| CG11981-PA [Drosophila ananassae]
 gi|269973446|emb|CBE66650.1| CG11981-PA [Drosophila ananassae]
          Length = 205

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +    +  + +KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFL-GLTGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITL 119
            T+ +RL  +   Y  +  R          +  +L          +              
Sbjct: 61  LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICV 174
           +      G   EP++  +  G+           L       +   E+  ++M  A D   
Sbjct: 121 ICNMDLIGCPNEPDD-FVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMMNAFDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +     +  ++  
Sbjct: 180 MSGWGATVYIIEKD 193


>gi|312378864|gb|EFR25317.1| hypothetical protein AND_09469 [Anopheles darlingi]
          Length = 205

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 55/196 (28%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  +  KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYL-GLVGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL  +   Y  +  R          +  +L               ++        
Sbjct: 61  LTVYQRLIFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFI---EPVIAGLDPKTY 117

Query: 129 EP-------------ENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI 172
           EP              N  +  G+           L   +   +   E+  +A+  A D 
Sbjct: 118 EPFICNMDLIGCPNLPNDFVVAGTCAEQLYGMCETLWKPELEPDNLFEVISQALVNAFDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +     +  ++  
Sbjct: 178 DAISGWGATVYIIEKE 193


>gi|310793289|gb|EFQ28750.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 263

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 62/221 (28%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
            +      +  + L +      ++AGD + + G ++      KV ++G          I+
Sbjct: 31  HRFNPYTDNGGSTLAIAGADFAIMAGDTRSTSGYSINSRYTPKVFKIGGTTSTQEDATIL 90

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L +RL+   + Y  +  +     A   R+   L             + 
Sbjct: 91  LSVVGFAADGEALKDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYAILG 150

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
            +         +             A G+  S         ++ +N              
Sbjct: 151 GLDEEGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVPGSGVGHELQE 210

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                     AE + + A   A +  +    ++ +  +   
Sbjct: 211 RPRVPLERKEAEILVKDAFDGAVERHIEVGDHLQMMVITKN 251


>gi|226505280|ref|NP_001141963.1| hypothetical protein LOC100274112 [Zea mays]
 gi|194706600|gb|ACF87384.1| unknown [Zea mays]
          Length = 204

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 58/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + ++V ++     I G +G + DA
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKVHDKLYI-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D  +  +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDNVPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
            T       E     +  G+       A  ++       +E+     +A++ + D  
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACESMYRPNMEPDELFETVSQALNSSIDRD 177


>gi|171696000|ref|XP_001912924.1| hypothetical protein [Podospora anserina S mat+]
 gi|170948242|emb|CAP60406.1| unnamed protein product [Podospora anserina S mat+]
          Length = 203

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 51/187 (27%), Gaps = 14/187 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + +     V IA D ++ L    +  N  K+ + G    + G  G + D  T+ + 
Sbjct: 6   GGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDNVFL-GLTGLATDVATVSDL 64

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR--MDKYLRNLEAMI-------LIADKTITLVITGMG 125
              K+  Y  +  R               Y R             L        +     
Sbjct: 65  FRYKVNMYRLREERQIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGQPFICGFDS 124

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIV 181
              ++     +  G+          +L       +++     +++  A D    +     
Sbjct: 125 IGCIDFAKDFIVSGTATEQLFGMCESLWEPNLGPDQLFETISQSLLNAVDRDALSGWGAH 184

Query: 182 LETLKVG 188
           +  ++  
Sbjct: 185 VYIIEKD 191


>gi|134081009|emb|CAK41521.1| unnamed protein product [Aspergillus niger]
          Length = 199

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 51/179 (28%), Gaps = 11/179 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 1   MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVSYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPE 131
           L  Y      +           +     + M+           K    V +        +
Sbjct: 60  LNMYSITNNEAPSTQVAASLFQELCYENKDMLSAGIIIAGYDPKHGGQVYSIPLGGSLHK 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKV 187
                 GSG +Y      A      + EE     R A+  A      +   I L  L  
Sbjct: 120 QPFSIGGSGSTYIYGYCDAHWRENMTEEEGINFVRGALQEAIKWDGSSGGVIRLVVLTS 178


>gi|255938694|ref|XP_002560117.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584738|emb|CAP74264.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 259

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 66/221 (29%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD + + G  +      KV ++G         NII
Sbjct: 27  HSFYPYTDNGGSTLGITGADFAILAGDTRSTSGYNINSRMVPKVFKIGGDDETGEGANII 86

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L E+L+  +  Y  Q  +S    A   R+   L             + 
Sbjct: 87  LSVVGFAADGNALKEKLDTMVRMYKYQHGKSMSVGACAQRLSTILYEKRFFPYYVHAILA 146

Query: 119 L--------VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
                    + +             A G+  S  +      ++++N              
Sbjct: 147 GLDEEGVGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVNSKNQYIPGSGEGHALVP 206

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                    +A ++ + A + A +  +     + L  +   
Sbjct: 207 KKAEPLDKETATKLVKDAFTSAVERHIEVGDGLQLVIVTRE 247


>gi|170089877|ref|XP_001876161.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164649421|gb|EDR13663.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 249

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 48/152 (31%), Gaps = 9/152 (5%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                   +  TIL +      VIAGD + S G ++    A KV RL    ++A   G +
Sbjct: 8   HSFNPYTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLA-VNGFA 66

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV----- 120
           AD    ++++ ++LE Y +   +     A    +   L             +  +     
Sbjct: 67  ADGNMFVKKVRQRLEWYRHAHSKDMPIRAIARLIQTMLYARRFFPYYVYNILGGIEEDGT 126

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAAR 149
               +             A G+  S       
Sbjct: 127 GAVYSFDPVGSYEREACRAAGAAQSLMQPFLD 158


>gi|157112534|ref|XP_001651824.1| proteasome subunit beta type [Aedes aegypti]
 gi|108878045|gb|EAT42270.1| proteasome subunit beta type [Aedes aegypti]
          Length = 205

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 52/193 (26%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  +  KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYL-GLVGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITL 119
            T+ +RL  +   Y  +  R          +  +L          +              
Sbjct: 61  LTVHQRLLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVY 175
           +            N  +  G+           L       E   E+  +A+  A D    
Sbjct: 121 ICNMDLIGCPNMPNDFVVAGTCAEQLYGMCETLWKPDLEPEKLFEVISQALVNAFDRDAI 180

Query: 176 TNHNIVLETLKVG 188
           +     +  ++  
Sbjct: 181 SGWGATVYIVEKE 193


>gi|323306838|gb|EGA60123.1| Pre2p [Saccharomyces cerevisiae FostersO]
          Length = 168

 Score = 81.2 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 42/133 (31%), Gaps = 11/133 (8%)

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD------ 114
            AG +AD       L  +   +  +        A    +   +   +   L         
Sbjct: 1   MAGGAADCQFWETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGY 60

Query: 115 --KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
             K    +     D    +  +  +GSG ++A     +      S E+   + ++++  A
Sbjct: 61  TRKEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAA 120

Query: 170 ADICVYTNHNIVL 182
           A    Y+  ++ L
Sbjct: 121 AHRDAYSGGSVNL 133


>gi|119482712|ref|XP_001261384.1| proteasome component Pre3, putative [Neosartorya fischeri NRRL 181]
 gi|119409539|gb|EAW19487.1| proteasome component Pre3, putative [Neosartorya fischeri NRRL 181]
          Length = 229

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 49/179 (27%), Gaps = 11/179 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 29  MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVSYH 87

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDVLEPE 131
           L  Y                  +     + M+                V +        +
Sbjct: 88  LNMYGIVNNEPPSTQVAAALFQELCYENKDMLSAGIIIAGYDPRHGGQVYSIPLGGSLHK 147

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKV 187
                 GSG +Y      A      + EE     R A+  A      +   I L  L  
Sbjct: 148 QSYAIGGSGSTYIYGYCDAHWKENMTEEEGIKFVRDALQEAIKWDGSSGGVIRLVVLTS 206


>gi|148677981|gb|EDL09928.1| mCG1283 [Mus musculus]
          Length = 205

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 65/193 (33%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D    +   ++  + +K+  LG    I G AG + D 
Sbjct: 2   SIMPYNGGAVMAMKGKNCVAIAADRCFGIQAQMVTTDFQKIFALGDRLYI-GLAGLATDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIADKTITLVI 121
            T+ +RL+ +L  Y  +  R          +   L          E +I   D     + 
Sbjct: 61  QTVAQRLKFRLNLYMLKEGRHIKPFTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKLF 120

Query: 122 TGMGDVLEPE---NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
               D++      +  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCPMVTDDFVVSGTCSEQMHGMCESLWEPHMDPEHLFETISQAMLNAVDRDAM 180

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 181 SGMGVIVHVIEKD 193


>gi|195444118|ref|XP_002069722.1| GK11424 [Drosophila willistoni]
 gi|194165807|gb|EDW80708.1| GK11424 [Drosophila willistoni]
          Length = 205

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +    +  + +KV  +     + G  G   D 
Sbjct: 2   SILSYNGGCVVAMRGKECVAIATDHRFGVQAQTISTDFKKVFHIAPRMFL-GLTGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITL 119
            T+ +RL  +   Y  +  R          +  +L          +              
Sbjct: 61  LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFVEPVVAGLHPKTLEPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICV 174
           +      G   EP++  +  G+           L       +   E+  ++M  A D   
Sbjct: 121 ICNMDLIGCPNEPDD-FVVAGTCAEQLYGMCETLWRPNLDPDQLFEVISQSMVNAFDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +     +  ++  
Sbjct: 180 MSGWGATVYVIEKD 193


>gi|260793274|ref|XP_002591637.1| hypothetical protein BRAFLDRAFT_114609 [Branchiostoma floridae]
 gi|229276846|gb|EEN47648.1| hypothetical protein BRAFLDRAFT_114609 [Branchiostoma floridae]
          Length = 232

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V   G VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 32  GTSIMAVEFAGGVVIGADSRTTSGSYIANRVTDKLTPIHDRIFCC-RSGSAADTQAIADI 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +      +  ++    +                  +                V +     
Sbjct: 91  VSYHTSFHSIEVGEPPLVRTAANLFKDLCYRHREDLTAGIIVAGWDKRKGGQVYSVPLGG 150

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +     V   GSG +Y      +      + EE        +++A      +   I L  
Sbjct: 151 MLVRQPVAIGGSGSTYVYGYVDSHFKEGMTKEECFQFCANTLALAMFRDGSSGGVIRLAA 210

Query: 185 LKVG 188
           +   
Sbjct: 211 INED 214


>gi|326509597|dbj|BAJ87014.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 204

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + ++V ++  G +  G +G ++DA
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKI-HGKLYIGLSGLASDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  K + Y  +  R          +   L                        +
Sbjct: 61  QTLYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++       EE+     +A+  + D  
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRD 177


>gi|67528502|ref|XP_662053.1| hypothetical protein AN4449.2 [Aspergillus nidulans FGSC A4]
 gi|40741024|gb|EAA60214.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259482734|tpe|CBF77496.1| TPA: proteasome component Pup3, putative (AFU_orthologue;
           AFUA_4G07420) [Aspergillus nidulans FGSC A4]
          Length = 192

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 53/181 (29%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ +    +  N  K+     G  + G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPGTYL-GLTGLATDVSTVSDLFRLKVN 59

Query: 81  QYPNQLLR--SSVELAKDWRMDKYLRNLEAMI-------LIADKTITLVITGMG-DVLEP 130
            Y  +  R  +   LA       Y R   A         +        +        ++ 
Sbjct: 60  MYRLREERHIAPQTLANLVSSTLYERRFGAYFVSPVIAGINNTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L     S E++     +A+  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDMSPEDLFETISQALLSAVDRDALSGWGAQVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|226504734|ref|NP_001140276.1| hypothetical protein LOC100272320 [Zea mays]
 gi|194698808|gb|ACF83488.1| unknown [Zea mays]
          Length = 204

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 55/177 (31%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + R+V ++     I G +G + DA
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFRRVFKVHDKLYI-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y     R          +   L                  D     +
Sbjct: 61  QTLYQRLVFRHKLYQLMEERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++       EE+     +A+  + D  
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQASVDRD 177


>gi|209734998|gb|ACI68368.1| Proteasome subunit beta type-6 precursor [Salmo salar]
          Length = 199

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 56/178 (31%), Gaps = 34/178 (19%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 34  GTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 92

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
             + ++    ++                             K    V T     +     
Sbjct: 93  AAKFQITAGWDR-----------------------------KKGPQVYTVALGGMLLSQP 123

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKVG 188
               GSG +Y    A A      S EE    A  A+++A      +     L  +   
Sbjct: 124 FTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVITEE 181


>gi|197129777|gb|ACH46275.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
          Length = 149

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 1/127 (0%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           V   +      +  T+L +  +   ++A D ++S G ++   ++ K  +L +  +I G  
Sbjct: 22  VQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVI-GCT 80

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G   D  TL + +E +L+ Y +   ++    A    +   L +           I  +  
Sbjct: 81  GFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE 140

Query: 123 GMGDVLE 129
                + 
Sbjct: 141 EGKGAVY 147


>gi|10121721|gb|AAG13340.1|AF266220_1 proteasome subunit beta type 1 [Gillichthys mirabilis]
          Length = 181

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 3/153 (1%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  T+L V  +   ++A D ++S G ++   ++ K  +L    +I G +G  
Sbjct: 12  HRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVI-GCSGFH 70

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
            D  TL + ++ +L+ Y +   +     A    +   L             I  +     
Sbjct: 71  GDCLTLTKIIDARLKMYKHSNNKMMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 130

Query: 126 DVLE--PENGVMAIGSGGSYALSAARALMSTQN 156
                 P        +G   +      L+ T+ 
Sbjct: 131 GASTALPVGSYQRDPTGWKISHCMLPPLLDTRL 163


>gi|48431271|gb|AAT44125.1| 20S proteasome beta subunit E [Saussurea medusa]
          Length = 150

 Score = 80.8 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 5/106 (4%)

Query: 5   GDKHYAVKM----HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           G +  +++M      TT L       V++A + + S+G  +   + +K+  +    ++  
Sbjct: 42  GFQKSSIQMVKPAKGTTTLAFIFKEGVMVAANSRASMGGYISSQSVKKIIEINPY-MLGT 100

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
            AG +AD       L  K   +     R          +   L + 
Sbjct: 101 MAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSY 146


>gi|82621739|gb|ABB86551.1| proteosome PSMB6/9 protein [Branchiostoma lanceolatum]
          Length = 235

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ V   G VVI  D + + G  +      K+  +         +GS+AD   + + 
Sbjct: 35  GTSIMAVEFAGGVVIGADSRTTSGSYIANRVTDKLTPVHDRIFCC-RSGSAADTQAIADI 93

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +      +  ++    +                  +                V +     
Sbjct: 94  VSYHTSFHSIEIGEPPLVRTAANLFKDLCYRHREDLTAGIIVGGWDKRKGGQVYSVPLGG 153

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
           +     V   GSG +Y      +      + EE        +++A      +   I L  
Sbjct: 154 MLVRQPVAIGGSGSTYVYGYVDSHFKEGMTKEECFQFCANTLALAMFRDGSSGGVIRLAA 213

Query: 185 LKVG 188
           +   
Sbjct: 214 ITED 217


>gi|47157007|gb|AAT12375.1| proteasome beta-type subunit-like protein [Antonospora locustae]
          Length = 190

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 5/144 (3%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           H A K   TTI+ +R  G V +  D + ++G  V   N  K+ +L      AG   ++  
Sbjct: 13  HLAPKKTGTTIVGLRFAGGVALFADTRATIGDVVEDKNCFKLHQLADTIHCAGAGTAADT 72

Query: 68  AFTL---LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
                     L     +Y  +    + +      + +Y   + A +++A  D T   ++ 
Sbjct: 73  EHLTASCARFLILFRRKYCREPFVHTAQRFLCNHLHRYRGEIGAALILAGVDCTGPHLLY 132

Query: 123 GMGDVLEPENGVMAIGSGGSYALS 146
            M           ++GSG   A++
Sbjct: 133 IMPHGSSAPMWYTSMGSGSLAAMA 156


>gi|83765122|dbj|BAE55265.1| unnamed protein product [Aspergillus oryzae]
          Length = 227

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 50/180 (27%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 29  MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVSYH 87

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDVLEPE 131
           L  Y      +           +     + M+                V +        +
Sbjct: 88  LNMYSITNNEAPSTQVAASLFQELCYENKDMLSAGIIIAGYDPRHGGQVYSIPLGGSLHK 147

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      + EE     R A+  A      +   I L  L   
Sbjct: 148 QPYSIGGSGSTYIYGYCDANWKENMTEEEGINFVRGALREAIKWDGSSGGVIRLVVLTAK 207


>gi|169601780|ref|XP_001794312.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
 gi|111067849|gb|EAT88969.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
          Length = 264

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 66/221 (29%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD + + G  +    A K+ ++G          I+
Sbjct: 32  HGFYPYTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGARIV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L N           + 
Sbjct: 92  LSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVAACAQRLSHILYNKRFFPYYVHAILG 151

Query: 119 L--------VITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
                    + +             A G+  S  +      ++                 
Sbjct: 152 GLDENGTGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNMYEPGSGTGHDLKQ 211

Query: 154 ------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                 +Q+  E++ R A + A +  +     + +  +   
Sbjct: 212 KKIEPLSQDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKE 252


>gi|58395630|ref|XP_321394.2| AGAP001697-PA [Anopheles gambiae str. PEST]
 gi|55233656|gb|EAA00889.2| AGAP001697-PA [Anopheles gambiae str. PEST]
          Length = 205

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 55/196 (28%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +    +  +  KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYL-GLVGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL  +   Y  +  R          +  +L               ++        
Sbjct: 61  LTVYQRLLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFI---EPVIAGLDPKTY 117

Query: 129 EP-------------ENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI 172
           EP              N  +  G+           L      ++   E+  +A+  A D 
Sbjct: 118 EPFICNMDLIGCPNLPNDFVVAGTCAEQLYGMCETLWKPDLESDSLFEVISQALVNAFDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +     +  ++  
Sbjct: 178 DAISGWGATVYIIEKE 193


>gi|326488821|dbj|BAJ98022.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326512002|dbj|BAJ95982.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 204

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 58/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + ++V ++  G +  G +G ++DA
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKI-HGKLYIGLSGLASDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  K + Y  +  R          +   L                  +     +
Sbjct: 61  QTLYQRLVFKHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPIIAGLGENDQPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++       EE+     +A+  + D  
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPDMEPEELFETISQALLSSVDRD 177


>gi|294879946|ref|XP_002768837.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
 gi|239871775|gb|EER01555.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
          Length = 444

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 14/196 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSS 65
               ++ +  +++ ++ +G V IA D +  + Q   + AN +KV  +     + GF G +
Sbjct: 239 SGNIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTS-RCLVGFQGLA 297

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTI 117
            D+ TL + L+ +L+ Y  +  R          M   L                  +   
Sbjct: 298 TDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGE 357

Query: 118 TLVITGMGDVLE-PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             + +      E      +  G+     +  A +        EE+A    +++    D  
Sbjct: 358 PFISSFDLIGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRD 417

Query: 174 VYTNHNIVLETLKVGD 189
             +    V+  L   +
Sbjct: 418 CLSGWGGVVYILTDKE 433


>gi|195383604|ref|XP_002050516.1| GJ22197 [Drosophila virilis]
 gi|194145313|gb|EDW61709.1| GJ22197 [Drosophila virilis]
          Length = 221

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 11/181 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D + S    V   +A K+ R+         +GS++   TL   
Sbjct: 9   GTTIIAVEFDGGVVMGADSRTSCRTYVSNRSADKLTRITDHIYCC-RSGSASQTQTLANT 67

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITL-VITGMGDV 127
           +   +  Y   +   ++           + +    ++        D+     V +     
Sbjct: 68  VAYAMNYYECSMGEPALVRDAAVHFRNKIYDSRQTMMASIIVAGWDRRHGGQVYSVPITG 127

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
           L         GSG +Y      A            E+ + A+ +A      +   + L  
Sbjct: 128 LMVHEPCAVAGSGAAYIQGFVTAHYRPGMQQADTVELVKNAVQLAIQHDCSSGGIVRLGV 187

Query: 185 L 185
           +
Sbjct: 188 I 188


>gi|156036420|ref|XP_001586321.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154698304|gb|EDN98042.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 264

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 62/224 (27%), Gaps = 38/224 (16%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL-------GKG 55
                 Y    +  + L +      ++AGD + + G  +      KV ++          
Sbjct: 29  TQHHGFYPYTDNGGSTLAISGSDFTIVAGDTRSTSGYNINTRYQPKVFKIGGTTASQDDA 88

Query: 56  NIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK 115
            ++    G +AD   L ERL+  ++ Y  Q  +     A   R+   L +          
Sbjct: 89  TLVLSVVGFAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTA 148

Query: 116 TITLV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-------------- 153
            +  +         +             A G+  S  +      ++              
Sbjct: 149 ILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYIPGSGVGHE 208

Query: 154 ---------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                     +N  E++ + A   A +  +     + +  +   
Sbjct: 209 LAEREKIPLPRNEVEDLVKDAFDSAVERHIEVGDGLQMLIITKD 252


>gi|15668771|ref|NP_247571.1| proteasome subunit alpha [Methanocaldococcus jannaschii DSM 2661]
 gi|2499836|sp|Q60177|PSA_METJA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|1591299|gb|AAB98581.1| proteasome, subunit alpha (psmA) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 261

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 16/189 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +     VV+A D +++  + V   +  K+ ++      A     +     +  
Sbjct: 34  RGTTAIGIACKDGVVLAVDRRITS-KLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            RLE ++ +       S   LAK     K                +I   DK    +   
Sbjct: 93  ARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEARLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNI 180
                  E    AIGSG    +           + +   E+A  A++ A +  +    N+
Sbjct: 153 DPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANE-DI-KPENV 210

Query: 181 VLETLKVGD 189
            +  + V D
Sbjct: 211 DVCIITVKD 219


>gi|14520823|ref|NP_126298.1| proteasome subunit alpha [Pyrococcus abyssi GE5]
 gi|12229944|sp|Q9V122|PSA_PYRAB RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|5458039|emb|CAB49529.1| psmA proteasome, subunit alpha (EC 3.4.99.46) [Pyrococcus abyssi
           GE5]
          Length = 260

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 61/187 (32%), Gaps = 11/187 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+    VV+A + +++  + +   +  K+ ++      A  G    +      
Sbjct: 35  RGATAVGVKCKDGVVLAVEKRITS-RLIEPESYEKIFQIDDHIAAASSGIIADARVLVNR 93

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGM 124
                +       +    +V + K   + +             A+++        +    
Sbjct: 94  ARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDKPELYETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYTNHNIVLE 183
                     +AIGSG + A++          + +E  + A+   A  +   +  NI + 
Sbjct: 154 PSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTMEKPSAENIEVA 213

Query: 184 TLKVGDE 190
            + V D+
Sbjct: 214 VITVKDK 220


>gi|154323890|ref|XP_001561259.1| hypothetical protein BC1G_00344 [Botryotinia fuckeliana B05.10]
 gi|150842573|gb|EDN17766.1| hypothetical protein BC1G_00344 [Botryotinia fuckeliana B05.10]
          Length = 260

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 26/208 (12%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T+++ ++    VVIA D   S G      + +++R+    +++ GF G  
Sbjct: 32  HTQSPI-VTGTSVVALKFKDGVVIAADNLASYGSLARFTDVKRLRKFADTSVV-GFGGDV 89

Query: 66  ADAFTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDKYLRN--------LEAMILIADKT 116
           +D   L   L+    E+       +         + K L             +++     
Sbjct: 90  SDMQYLDRLLQSLDTEEAYGASGHTLNAHNLHKYLSKVLYKRRSDFNPLWNTLLVAGLDE 149

Query: 117 I--TLVITGMGDVLEPENGVMAIGSGGSYALSAAR--------ALMSTQNSAEEIARKAM 166
                + +         +  +A G G   A    R        A   T+ +A E  +++M
Sbjct: 150 HDKPFLASADLLGTTFSSPSLATGFGAHLAQPLLRKVAPDEEAAAKLTKEAALEAVKESM 209

Query: 167 SI-----AADICVYTNHNIVLETLKVGD 189
            +     A  +  Y+   I  E + + +
Sbjct: 210 KVLFYRDARSMDKYSIAVITKEGIDLKE 237


>gi|239782083|pdb|3H4P|A Chain A, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782084|pdb|3H4P|B Chain B, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782085|pdb|3H4P|C Chain C, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782086|pdb|3H4P|D Chain D, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782087|pdb|3H4P|E Chain E, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782088|pdb|3H4P|F Chain F, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782089|pdb|3H4P|G Chain G, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782097|pdb|3H4P|H Chain H, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782098|pdb|3H4P|I Chain I, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782099|pdb|3H4P|J Chain J, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782100|pdb|3H4P|K Chain K, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782101|pdb|3H4P|L Chain L, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782102|pdb|3H4P|M Chain M, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
 gi|239782103|pdb|3H4P|N Chain N, Proteasome 20s Core Particle From Methanocaldococcus
           Jannaschii
          Length = 264

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 16/189 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +     VV+A D +++  + V   +  K+ ++      A     +     +  
Sbjct: 37  RGTTAIGIACKDGVVLAVDRRITS-KLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDR 95

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            RLE ++ +       S   LAK     K                +I   DK    +   
Sbjct: 96  ARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEARLFET 155

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNI 180
                  E    AIGSG    +           + +   E+A  A++ A +  +    N+
Sbjct: 156 DPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANE-DI-KPENV 213

Query: 181 VLETLKVGD 189
            +  + V D
Sbjct: 214 DVCIITVKD 222


>gi|225719600|gb|ACO15646.1| Proteasome subunit beta type-6 precursor [Caligus clemensi]
          Length = 230

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+L       V++A D + S G  V+     K+  +    I+   +GS+AD   + + 
Sbjct: 32  GTTLLACEYKDGVLLAADCRTSHGSLVVNRETDKLTPVSD-KILCCRSGSAADTQAIAKA 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L+ Y   +  ++                   +                V +     
Sbjct: 91  IRYNLDMYNVMMGETAPVETVAHLFKSICYEYRDSLTAGILVGGWDKIRGGQVYSIPLGG 150

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
           +       + GSG  Y  +   A           +++  + ++ A +    +  +    +
Sbjct: 151 MCVRQAYASGGSGSVYLHAFMSANYKEGMNKEDCKKMLIRGIASAVEFDGSSGGSCRWAS 210

Query: 185 LKVG 188
           +   
Sbjct: 211 ITKD 214


>gi|46108556|ref|XP_381336.1| hypothetical protein FG01160.1 [Gibberella zeae PH-1]
          Length = 264

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 63/221 (28%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
            +      +  + L +      ++AGD + + G ++    + KV R+G          ++
Sbjct: 32  HRFNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATLV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L + L+   + Y  +  +     A   R+   L         +   + 
Sbjct: 92  LSVVGFAADGEALRDHLDTICKIYRYRHGKPMSVNACAKRLSTVLYGKRFFPYYSHAMLG 151

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSA 158
            +         +             A G+ GS  +      ++             +   
Sbjct: 152 GLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPGSGEGHELKE 211

Query: 159 EE-----------IARKAMSIAADICVYTNHNIVLETLKVG 188
            E           + + A   A +  +    N+ +  +   
Sbjct: 212 RERRPLTRTEVETVVKDAFDGAVERHIEVGDNLQMLIITAD 252


>gi|14591336|ref|NP_143414.1| proteasome subunit alpha [Pyrococcus horikoshii OT3]
 gi|6685785|sp|O59219|PSA_PYRHO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|3257982|dbj|BAA30665.1| 260aa long hypothetical proteasome, alpha subunit [Pyrococcus
           horikoshii OT3]
          Length = 260

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 11/187 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+ +  VV+A + +++  + +   +  K+ ++      A  G    +      
Sbjct: 35  RGATAVGVKCNEGVVLAVEKRITS-RLIEPESYEKIFQIDDHIAAASSGIIADARVLVNR 93

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGM 124
                +       +    +V + K   + +             A+++        +    
Sbjct: 94  ARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEKPELYETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYTNHNIVLE 183
                     +AIGSG + A++          S EE  + A+   A  +   +  NI + 
Sbjct: 154 PSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTMEKPSAENIEVA 213

Query: 184 TLKVGDE 190
            + V D+
Sbjct: 214 IITVKDK 220


>gi|322698009|gb|EFY89783.1| proteasome component C5 [Metarhizium acridum CQMa 102]
          Length = 263

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 60/221 (27%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL-------GKGNII 58
            +      +  + L +      ++AGD + + G ++    A KV ++           I+
Sbjct: 31  HRFNPYTDNGGSTLGIAGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGSTASQDDATIV 90

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ++L+   + Y  +  +     A   R+   L             + 
Sbjct: 91  LSVCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYVTAMLG 150

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSA 158
            +         +             A G+ GS  +      ++                 
Sbjct: 151 GLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYVPGSGEGHDLQE 210

Query: 159 EE-----------IARKAMSIAADICVYTNHNIVLETLKVG 188
            E           I + A   A +  +     + +  +   
Sbjct: 211 RERHPLSRAQVETIIKDAFDGAVERHIEVGDALQMLIITKD 251


>gi|189219292|ref|YP_001939933.1| 20S proteasome, alpha subunit [Methylacidiphilum infernorum V4]
 gi|189186150|gb|ACD83335.1| 20S proteasome, alpha subunit [Methylacidiphilum infernorum V4]
          Length = 277

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 67/192 (34%), Gaps = 25/192 (13%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             + +TTIL       V++AGD + + G  V+   A KV  + +  I+A  AG+ A AF 
Sbjct: 53  FSIESTTILAFYYKEGVIVAGDRRATAGNLVIHERAEKVISIDRNTILA-VAGTPATAFE 111

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------------DKT 116
           +   L+   E Y    L+     AK   + K L++   M L                 K 
Sbjct: 112 IARVLQHSFEFYRRSQLQPLSVAAKVRMVSKLLKDNMPMSLQGIGIVVPLLALGDPFGKE 171

Query: 117 ITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMST---------QNSAEEIARKAM 166
              +                  GSG +   S  + +            +  +  +A + +
Sbjct: 172 KPAIYFYDALGAQFQTVDFAVSGSGSAAVRSILQYINRWSGKPTNERGEEESISLALQLL 231

Query: 167 SIAADICVYTNH 178
            IAA+    T  
Sbjct: 232 DIAAESDTATGG 243


>gi|289193038|ref|YP_003458979.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
           sp. FS406-22]
 gi|288939488|gb|ADC70243.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
           sp. FS406-22]
          Length = 261

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 16/189 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +     VV+A D +++  + V   +  K+ ++      A     +     +  
Sbjct: 34  RGTTAIGIVCKDGVVLAVDRRITS-KLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            RLE ++ +       S   LAK     K                +I   D+    +   
Sbjct: 93  ARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDRNEARLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNI 180
                  E    AIGSG    +           + +   E+A  A++ A +  +    N+
Sbjct: 153 DPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANE-DI-KPENV 210

Query: 181 VLETLKVGD 189
            +  + V D
Sbjct: 211 DVCVITVKD 219


>gi|159041041|ref|YP_001540293.1| proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
 gi|302595700|sp|A8MBW0|PSB1_CALMQ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|157919876|gb|ABW01303.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
          Length = 206

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 55/177 (31%), Gaps = 13/177 (7%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
              VV+A D +V+ G  +     RK+ ++      A  +G+ AD   +L  L      Y 
Sbjct: 23  KEGVVLATDRRVTAGYYIAHRKGRKIWKIDNH-AAATMSGAVADVQMILNELTHLAMNYR 81

Query: 84  NQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLVITGMGDVLEP-ENGV 134
                              +     MI IA        ++   ++           E   
Sbjct: 82  ITHQAPVPIKTLANYASVVMFYSRPMIYIAHMIIGGVDNEEGPVLYAVDWYGSFTREERF 141

Query: 135 MAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           M+ GSG   A            S   A ++A +A+  A      +   + + T+   
Sbjct: 142 MSTGSGSPTAFGVLEDGYRDDMSLDDAVKLATRAVRAAMLHDPGSGEGVDVITITKE 198


>gi|294929626|ref|XP_002779296.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
 gi|239888359|gb|EER11091.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
          Length = 444

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 14/196 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSS 65
               ++ +  +++ ++ +G V IA D +  + Q   + AN +KV  +     + GF G +
Sbjct: 239 SGNIMEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTS-RCLVGFQGLA 297

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTI 117
            D+ TL + L+ +L+ Y  +  R          M   L                  +   
Sbjct: 298 TDSQTLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGE 357

Query: 118 TLVITGMGDVLE-PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             + +      E      +  G+     +  A +        EE+A    +++    D  
Sbjct: 358 PFISSFDLIGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRD 417

Query: 174 VYTNHNIVLETLKVGD 189
             +    V+  L   +
Sbjct: 418 CLSGWGGVVYILTDKE 433


>gi|307206411|gb|EFN84449.1| Proteasome subunit beta type-6 [Harpegnathos saltator]
          Length = 197

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 11/165 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           +    DG VVI  D + + G  +    A K+ R+         +GS+AD   + + +   
Sbjct: 1   MACEFDGGVVIGADSRATTGSYISNRFADKLTRVTDHIYCC-RSGSAADTQAITDIVAYH 59

Query: 79  LEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGDVLEPE 131
           L  +  +L    +              Y  +L A IL+A         V +     +   
Sbjct: 60  LGLHQMELGAQPLVETAANVFREICYNYRDSLMAGILVAGWDKQKGGQVYSIPIGGMCVR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
             +   GSG +Y      A   +  + EE   +    +++A    
Sbjct: 120 QPISIGGSGSTYVYGYVDAQYKSNMTKEESLKLVENTLALAMTRD 164


>gi|294948700|ref|XP_002785851.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
 gi|239899959|gb|EER17647.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
          Length = 202

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 73/203 (35%), Gaps = 24/203 (11%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++ +  +++ ++ +G V IA D +  + Q   + AN +KV  +     + GF G + D+ 
Sbjct: 1   MEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTS-RCLVGFQGLATDSQ 59

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLVI 121
           TL + L+ +L+ Y  +  R          M   L                  +     + 
Sbjct: 60  TLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGLKNDGEPFIS 119

Query: 122 TGMGDVLE-PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC---- 173
           +      E      +  G+     +  A +        EE+A    +++    D      
Sbjct: 120 SFDLIGTESTAPDFIVSGTATEQLMGVAESFWREGMGPEELAEVLGQSLLSGIDRDCLSG 179

Query: 174 ----VY--TNHNIVLETLKVGDE 190
               VY  T+  ++ +TLK   +
Sbjct: 180 WGGMVYILTDKELITKTLKGRMD 202


>gi|91694273|gb|ABE41788.1| 20S proteasome subunit [Hypocrea lixii]
          Length = 261

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 73/211 (34%), Gaps = 29/211 (13%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +    + +  T+++ ++    VV+A D   S G      + +++R     +I+ GF+G  
Sbjct: 32  NTQQPI-VTGTSVIGIKFKDGVVMAADNLASYGSLARFTDVKRLRTFADSSIV-GFSGDI 89

Query: 66  ADAFTLLERLE-----------KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA- 113
           +D   L   L             K       L R   +L    R  K+      +++   
Sbjct: 90  SDMQYLDRHLIDLSLSEAYESPDKPRLNAANLHRYLSKLL-YNRRSKFDPLWNHLLIGGL 148

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE--------IARK 164
            D     +              +A G G   A    R  +  + SA++        I ++
Sbjct: 149 DDNGEPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRRYVPDEESAKKLSREEAINIVKE 208

Query: 165 AMSI-----AADICVYTNHNIVLETLKVGDE 190
           AM +     A  +  Y+   +  E +++  +
Sbjct: 209 AMKVLFYRDARSLDSYSLAVVTKEGVELKQD 239


>gi|154308528|ref|XP_001553600.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150852865|gb|EDN28057.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 264

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 61/224 (27%), Gaps = 38/224 (16%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL-------GKG 55
                 Y    +  + L +      ++AGD + + G  +      KV ++          
Sbjct: 29  TQHHGFYPYTDNGGSTLAISGSDFTIVAGDTRSTSGYNINTRYQPKVFKIGGTTAAQDDA 88

Query: 56  NIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK 115
            ++    G +AD   L ERL+  ++ Y  Q  +     A   R+   L +          
Sbjct: 89  TLVLSVVGFAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTA 148

Query: 116 TITLV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-------------- 153
            +  +         +             A G+  S  +      ++              
Sbjct: 149 ILGGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNQYIPGSGEGHA 208

Query: 154 ---------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                     +   E++ + A   A +  +     + +  +   
Sbjct: 209 LAEREKIPLPRKEVEDLVKDAFDSAVERHIEVGDGLQMLIITKE 252


>gi|21355629|ref|NP_649858.1| proteasome beta3 subunit [Drosophila melanogaster]
 gi|194903499|ref|XP_001980880.1| GG17403 [Drosophila erecta]
 gi|195330532|ref|XP_002031957.1| GM26292 [Drosophila sechellia]
 gi|195499293|ref|XP_002096887.1| GE24806 [Drosophila yakuba]
 gi|195572401|ref|XP_002104184.1| GD20828 [Drosophila simulans]
 gi|17380236|sp|Q9XYN7|PSB3_DROME RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
           proteasome subunit beta-3
 gi|4559288|gb|AAD22968.1|AF116898_1 20S proteasome beta3 subunit [Drosophila melanogaster]
 gi|7299121|gb|AAF54320.1| proteasome beta3 subunit [Drosophila melanogaster]
 gi|20151995|gb|AAM11357.1| LD16402p [Drosophila melanogaster]
 gi|116806244|emb|CAL26545.1| CG11981 [Drosophila melanogaster]
 gi|116806246|emb|CAL26546.1| CG11981 [Drosophila melanogaster]
 gi|116806248|emb|CAL26547.1| CG11981 [Drosophila melanogaster]
 gi|116806250|emb|CAL26548.1| CG11981 [Drosophila melanogaster]
 gi|116806252|emb|CAL26549.1| CG11981 [Drosophila melanogaster]
 gi|116806254|emb|CAL26550.1| CG11981 [Drosophila melanogaster]
 gi|116806256|emb|CAL26551.1| CG11981 [Drosophila melanogaster]
 gi|116806258|emb|CAL26552.1| CG11981 [Drosophila melanogaster]
 gi|116806260|emb|CAL26553.1| CG11981 [Drosophila simulans]
 gi|190652583|gb|EDV49838.1| GG17403 [Drosophila erecta]
 gi|194120900|gb|EDW42943.1| GM26292 [Drosophila sechellia]
 gi|194182988|gb|EDW96599.1| GE24806 [Drosophila yakuba]
 gi|194200111|gb|EDX13687.1| GD20828 [Drosophila simulans]
 gi|220942808|gb|ACL83947.1| Prosbeta3-PA [synthetic construct]
 gi|223967619|emb|CAR93540.1| CG11981-PA [Drosophila melanogaster]
 gi|223967621|emb|CAR93541.1| CG11981-PA [Drosophila melanogaster]
 gi|223967623|emb|CAR93542.1| CG11981-PA [Drosophila melanogaster]
 gi|223967625|emb|CAR93543.1| CG11981-PA [Drosophila melanogaster]
 gi|223967627|emb|CAR93544.1| CG11981-PA [Drosophila melanogaster]
 gi|223967629|emb|CAR93545.1| CG11981-PA [Drosophila melanogaster]
 gi|223967631|emb|CAR93546.1| CG11981-PA [Drosophila melanogaster]
 gi|223967633|emb|CAR93547.1| CG11981-PA [Drosophila melanogaster]
 gi|223967635|emb|CAR93548.1| CG11981-PA [Drosophila melanogaster]
 gi|223967637|emb|CAR93549.1| CG11981-PA [Drosophila melanogaster]
 gi|223967639|emb|CAR93550.1| CG11981-PA [Drosophila melanogaster]
          Length = 205

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 57/196 (29%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +    +  + +KV  +G    + G  G   D 
Sbjct: 2   SILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFL-GLTGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL  +   Y  +  R          M  +L               +V       +
Sbjct: 61  LTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFI---EPVVAGLDPKTM 117

Query: 129 EP-------------ENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI 172
           EP              +  +  G+           L       +   E+  +++  A D 
Sbjct: 118 EPFICNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDR 177

Query: 173 CVYTNHNIVLETLKVG 188
              +     +  ++  
Sbjct: 178 DAMSGWGATVYIIEKD 193


>gi|70991377|ref|XP_750537.1| proteasome component Pre4 [Aspergillus fumigatus Af293]
 gi|66848170|gb|EAL88499.1| proteasome component Pre4, putative [Aspergillus fumigatus Af293]
 gi|159124093|gb|EDP49211.1| proteasome component Pre4, putative [Aspergillus fumigatus A1163]
          Length = 260

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 71/200 (35%), Gaps = 25/200 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+  G V IA D   S G     ++ +++R  G+  +I GF+G  +D   +   
Sbjct: 40  GTSVVAVKFGGGVAIAADNLASYGSLARFSDVKRLRVFGESAVI-GFSGDVSDMQHIDRL 98

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           LE   + +  +    +         + K  Y R  E   L                + + 
Sbjct: 99  LESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPLWNQVLVAGFDGNNQPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK----AMS---------IAA 170
                      +A G G   A+   R L   +   EEI ++    A+           A 
Sbjct: 159 DLLGTTFSAPHLATGFGAHLAIPILRRLFPEEKPVEEITKEEAVNALKECLKVLWYRDAR 218

Query: 171 DICVYTNHNIVLETLKVGDE 190
            +  ++   I  E +++ ++
Sbjct: 219 SLDKFSLAVITKEGVEMHED 238


>gi|213401303|ref|XP_002171424.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
 gi|211999471|gb|EEB05131.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
          Length = 193

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 56/155 (36%), Gaps = 9/155 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TI+ +  +   +IAGD +   G  +    + +V  +G   I+ G  G  A
Sbjct: 5   RFDPYVQNGGTIVGIAGEDFSIIAGDTRNVNGYNINTRFSPRVHEVGDKLIL-GATGFEA 63

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTIT 118
           DA TL++R+ ++++ Y +   R     +    +   L                   K + 
Sbjct: 64  DALTLVKRIRQRIDLYHDNHKRIMSPSSCSRMVQTMLYGKRFFPYYVYTLVAGLDEKGVG 123

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMS 153
            + +             A GS  ++ LS     ++
Sbjct: 124 ALYSFDPVGSYEREWCRAAGSAANFMLSFLDNQVN 158


>gi|302412397|ref|XP_003004031.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
 gi|261356607|gb|EEY19035.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
          Length = 264

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 63/221 (28%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL-------GKGNII 58
            +      +  + L +      ++AGD + + G ++    + KV ++           I+
Sbjct: 32  HRFNPYTDNGGSTLAIAGADFAIVAGDTRSTSGYSINSRYSPKVYKIGGTTSNQDDATIL 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+   + Y ++  ++    A   R+   L             + 
Sbjct: 92  LSVVGFAADGEALKERLDAICKIYRHRHGKAMSVTACAKRLSTILYQKRFFPYYVYAILG 151

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
            +         +             A G+  S         ++ +N              
Sbjct: 152 GLDEKGVGAVFSYDPVGSYEREQSRAGGAAASLITPFLDNQVNFKNQYVPGSGVGHELKE 211

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                     AE + + A   A +  +     + +  +   
Sbjct: 212 REVVPLERKEAEILVKDAFDGAVERHIEVGDALQMMVITSK 252


>gi|302829446|ref|XP_002946290.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
           nagariensis]
 gi|300269105|gb|EFJ53285.1| hypothetical protein VOLCADRAFT_78969 [Volvox carteri f.
           nagariensis]
          Length = 204

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 58/204 (28%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                + + I+ +     V I  D +  +    +  +  KV ++     + G +G   DA
Sbjct: 2   SIFSYNGSAIVAMAGKECVAIGSDLRFGVQYQTISCDTPKVFKIHDKLYL-GLSGLLTDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------DKTITL 119
            TL ++L  +   Y  +  R          +   L         A         D T  L
Sbjct: 61  QTLHQKLLFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGTPYL 120

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC--- 173
                   +E     M  G+          ++       EE+     + +    D     
Sbjct: 121 SGMDTIGAIETAKDFMIGGTSPESLYGMCESMWRPDMEPEELFETVAQCLMSGFDRDALA 180

Query: 174 -------VYTNHNIVLETLKVGDE 190
                  V T   ++  TLK   +
Sbjct: 181 GWGAVIHVITKDKVITRTLKTRMD 204


>gi|125778116|ref|XP_001359838.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
 gi|195157484|ref|XP_002019626.1| GL12496 [Drosophila persimilis]
 gi|54639588|gb|EAL28990.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
 gi|194116217|gb|EDW38260.1| GL12496 [Drosophila persimilis]
          Length = 205

 Score = 80.0 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 60/194 (30%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +    +  + +KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFL-GLTGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------- 120
            T+ +RL  +   Y  +  R          +  +L          +  +  +        
Sbjct: 61  LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTLKPF 120

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICV 174
              +  +G   EP++  +  G+           L       +   E+  ++M  A D   
Sbjct: 121 VCNMDLIGCPNEPDD-FVVAGTCAEQLYGMCETLWKPDLQPDQLFEVIAQSMMNAFDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +     +  ++  
Sbjct: 180 MSGWGATVYIIEKD 193


>gi|258564630|ref|XP_002583060.1| proteasome component C5 [Uncinocarpus reesii 1704]
 gi|237908567|gb|EEP82968.1| proteasome component C5 [Uncinocarpus reesii 1704]
          Length = 259

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 66/220 (30%), Gaps = 37/220 (16%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG------KGNIIA 59
              Y    +  + L +      ++AGD +   G  +    A KV ++G       G+II 
Sbjct: 28  HGFYPYTDNGGSTLGITGPNFAILAGDTRSVSGYNINTRFAPKVFKIGADDAGEGGHIIL 87

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
              G SAD   L ERL+  ++ Y     +     A   R+   L +           +  
Sbjct: 88  SVVGFSADGQALKERLDAIVKMYEYHHGKPMSVKACAQRLSTILYSKRFFPYYVHAILGG 147

Query: 120 --------VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------------ 153
                   + +             A G+  S  +      ++                  
Sbjct: 148 LDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAERGDELVPR 207

Query: 154 -----TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                ++++A E+ R A + A +  +     +    +   
Sbjct: 208 VPEPLSRDTALELVRDAFTSAVERHIEVGDGLQTMIITSD 247


>gi|195111548|ref|XP_002000340.1| GI10178 [Drosophila mojavensis]
 gi|193916934|gb|EDW15801.1| GI10178 [Drosophila mojavensis]
          Length = 205

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +    +  + +KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFL-GLTGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITL 119
            T+ +RL  +   Y  +  R          +  +L          +              
Sbjct: 61  LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICV 174
           +      G   EP++  +  G+           L       +   E+  ++M  A D   
Sbjct: 121 ICNMDLIGCPNEPDD-FVVAGTCAEQLYGMCETLWRPDLEPDQLFEVISQSMVNAFDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +     +  ++  
Sbjct: 180 MSGWGATVYIIEKD 193


>gi|194744578|ref|XP_001954770.1| GF18436 [Drosophila ananassae]
 gi|190627807|gb|EDV43331.1| GF18436 [Drosophila ananassae]
          Length = 205

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 56/194 (28%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +    +  + +KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFL-GLTGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITL 119
            T+ +RL  +   Y  +  R          +  +L          +              
Sbjct: 61  LTVRDRLMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICV 174
           +      G   EP +  +  G+           L       +   E+  ++M  A D   
Sbjct: 121 ICNMDLIGCPNEPVD-FVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMMNAFDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +     +  ++  
Sbjct: 180 MSGWGATVYIIEKD 193


>gi|17380218|sp|Q9N9W8|PSB3_GIALA RecName: Full=Proteasome subunit beta type-3
 gi|9367751|emb|CAB97490.1| 20S proteasome subunit [Giardia intestinalis]
          Length = 207

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 55/189 (29%), Gaps = 12/189 (6%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + + + ++ ++    V +A D ++      +     +       + + G AG   D  T 
Sbjct: 6   EYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTT 65

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVIT 122
             ++  K   Y  Q  R     A    +  +L                  AD    L   
Sbjct: 66  YRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAM 125

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHN 179
                L+        G+   + L      +    S +EI     + +  A +   Y+   
Sbjct: 126 DTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWG 185

Query: 180 IVLETLKVG 188
             +  L+  
Sbjct: 186 AHVVVLRRD 194


>gi|195395370|ref|XP_002056309.1| GJ10880 [Drosophila virilis]
 gi|194143018|gb|EDW59421.1| GJ10880 [Drosophila virilis]
          Length = 205

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +    +  + +KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFL-GLTGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITL 119
            T+ +RL  +   Y  +  R          +  +L          +              
Sbjct: 61  LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICV 174
           +      G   EP++  +  G+           L       +   E+  ++M  A D   
Sbjct: 121 ICNMDLIGCPNEPDD-FVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMVNAFDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +     +  ++  
Sbjct: 180 MSGWGATVYIIEKD 193


>gi|302683915|ref|XP_003031638.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
 gi|300105331|gb|EFI96735.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
          Length = 208

 Score = 80.0 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 55/196 (28%), Gaps = 17/196 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +  +++ +     V IA D ++      +  +  K+  +     + G AG ++D 
Sbjct: 2   SIMEYNGGSVIAMVGKDCVAIASDLRLGNQAQGISTHFEKIFPVTDRTYV-GLAGLASDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------------DKT 116
            TL E+   ++  Y  +  R              L                         
Sbjct: 61  LTLREKFRFRVNMYTIKEEREIQPETFAHLASSTLYEHRFGPYFIEPVIAGMQKTPSGGY 120

Query: 117 ITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
              +        L      +  G+        A +L       E++     + +  A D 
Sbjct: 121 KPFIAAADLIGCLNFAKDFVLAGTASEKLFGVAESLWEPDLEPEDLFETISQTIMNAVDR 180

Query: 173 CVYTNHNIVLETLKVG 188
             Y+    ++  +   
Sbjct: 181 DAYSGWGCIVHVITQD 196


>gi|225717640|gb|ACO14666.1| Proteasome subunit beta type-6 precursor [Caligus clemensi]
          Length = 230

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 57/184 (30%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+L       V++A D + S G  V+     K+  +    I+   +GS+AD   + + 
Sbjct: 32  GTTLLACEYKDGVLLAADCRTSHGSLVVNRETDKLTPVSD-KILCCRSGSAADTQAIAKA 90

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDV 127
           +   L+ Y   +  ++                   +                V +     
Sbjct: 91  IRYNLDMYNVMMGETAPVETVAHLFKSICYEYRDSLTAGILVGGWDKIRGGQVYSIPLGG 150

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLET 184
           +       + GSG  Y  +   A           +++  + ++ A +    +  +    +
Sbjct: 151 MCVRQAYTSGGSGSVYLHAFMSANYKEGMNKEDCKKMLIRGIASAVEFDGSSGGSCRWAS 210

Query: 185 LKVG 188
           +   
Sbjct: 211 ITKD 214


>gi|219114096|ref|XP_002176225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402809|gb|EEC42786.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 248

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 22/181 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L +  DG V++A D  +S G      NAR++  +     + G +G  +D   + + 
Sbjct: 19  GTSVLGIVYDGGVLLAADTLLSYGSMAKDQNARRLHVIPGTFTMIGASGEYSDFQKVCQI 78

Query: 75  LEKK-LEQYPNQLLRSSVELA----------KDWRMDKYLRNLEAMILIAD--------K 115
           LE+K LE+    L+ S                  RM  Y R  +      D        +
Sbjct: 79  LEEKALEETHTSLMDSLYADTSQSITAASTWNYLRMVMYARRNKMNPFWNDILVAGTDRQ 138

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +          ++  +A G G   AL   R       S   A  +    M +    
Sbjct: 139 GKPFLGMVDKIGTTVQDNFLATGFGSYLALPIMREKWRPDLSEGEARALLEDCMKVLFYR 198

Query: 173 C 173
            
Sbjct: 199 D 199


>gi|323454510|gb|EGB10380.1| hypothetical protein AURANDRAFT_71184 [Aureococcus anophagefferens]
          Length = 535

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 56/194 (28%), Gaps = 19/194 (9%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
               +   I+ +     V IA D +  L Q  +  + +KV +     +  G AG + D  
Sbjct: 191 PCSHNGAAIVCMAGKNCVAIASDTRFGLSQQTVSCDFQKVFK-QSDRLFVGLAGLATDVQ 249

Query: 70  TLLERLEKKLE----QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTI 117
           TL   L+ K E     Y  +  R     A    +   L                  D   
Sbjct: 250 TLRNTLKFKREPALALYELREERVMKPEAFAALLSHMLYEKRFGPYFVEPVVAGLKDDGS 309

Query: 118 TLVITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
             +      G  +  ++  +  G+          ++       +E+     + +  + D 
Sbjct: 310 PFLCGMDLIGAPVYTDD-YVVSGTCTPNLNGMCESMWRPDMGPDELFETISQCLLASVDR 368

Query: 173 CVYTNHNIVLETLK 186
              +     +  L 
Sbjct: 369 DALSGWGATVHVLT 382


>gi|154278896|ref|XP_001540261.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
 gi|150412204|gb|EDN07591.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
          Length = 266

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 67/223 (30%), Gaps = 40/223 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
                   +  + L +      ++AGD +   G  +    A K+ ++G+G       +++
Sbjct: 32  HGFNPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDECGEGAHLV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMIL 111
               G +AD   L ERL+  ++ Y  +  +     A   R+   L         + A++ 
Sbjct: 92  LSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILA 151

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNS- 157
             D+     + +             A G+  S  +      ++                 
Sbjct: 152 GMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNAMDK 211

Query: 158 ------------AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                       A ++   A + A +  +     + +  +   
Sbjct: 212 QPRPSEPPPRDVALQLVNDAFTSAVERHIEVGDGLQVMVITRE 254


>gi|330914581|ref|XP_003296697.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
 gi|311331038|gb|EFQ95204.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
          Length = 264

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 65/221 (29%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD + + G  +    A K+ ++G          I+
Sbjct: 32  HGFYPYTDNGGSTLGISGADFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGARIV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L N           + 
Sbjct: 92  LSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAILG 151

Query: 119 L--------VITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
                    + +             A G+  S  +      ++                 
Sbjct: 152 GLDEEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNMYEPGSGTGHELKS 211

Query: 154 ------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                  ++  E++ R A + A +  +     + +  +   
Sbjct: 212 KQAQPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKE 252


>gi|195421055|ref|XP_002060834.1| GK20619 [Drosophila willistoni]
 gi|194156919|gb|EDW71820.1| GK20619 [Drosophila willistoni]
          Length = 229

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 55/199 (27%), Gaps = 18/199 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
               +    T++ +  +    IA D +++    + K  ++          + G  G   D
Sbjct: 21  FNPHEYIGGTLVAIAGNDFATIACDTRLTNDFNIRKMRSQSKLFDVSPQTVLGSVGCWCD 80

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVE--LAKDWRMDKYLRNLEAMILIADKTITLV---IT 122
              LL  +     +Y    L       LA      K+ R      ++A      +     
Sbjct: 81  TLALLSLVRSYSLKYELDNLMPVCPDSLASMLTRTKFTRQYFVSSVVAGIDSNGLGAVYF 140

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------------AEEIARKAMSIA 169
                          G+GG   L         +               A EI+ +A   A
Sbjct: 141 NDPSGNYLRLPYHISGTGGRIILPTLDWFEGNEEDQMNAITTSLTVDKAVEISMEAFRTA 200

Query: 170 ADICVYTNHNIVLETLKVG 188
            D  ++  + + +  +   
Sbjct: 201 RDRDIFIGNCMFINIITRE 219


>gi|302696941|ref|XP_003038149.1| hypothetical protein SCHCODRAFT_49831 [Schizophyllum commune H4-8]
 gi|300111846|gb|EFJ03247.1| hypothetical protein SCHCODRAFT_49831 [Schizophyllum commune H4-8]
          Length = 222

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 11/178 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+    VVI  D + + G  +      K+  +         +GS+AD   + + +  +
Sbjct: 1   MAVQFKDGVVIGADSRTTTGSYIANRVTDKLTHIHDRIYCC-RSGSAADTQAVADIVHYQ 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTI---TLVITGMGDVLEPE 131
           L+ +  Q               K     +    A I++A         V           
Sbjct: 60  LQMHAQQAGERPSVHIAASIFQKLCYENKDALSAGIIVAGWDKEIGPSVYNIPLGGGMFR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLK 186
                 GSG +Y      A        +E     +  +++A      +   I +  + 
Sbjct: 120 QPWAIGGSGSTYVYGYCDATYQEGWGRDETVNFVKNTLALAMSRDGSSGGVIRMCVIT 177


>gi|224063046|ref|XP_002300970.1| predicted protein [Populus trichocarpa]
 gi|118487526|gb|ABK95590.1| unknown [Populus trichocarpa]
 gi|222842696|gb|EEE80243.1| predicted protein [Populus trichocarpa]
          Length = 204

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 63/204 (30%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + I+ +       IA D ++ +    +  + +++ ++    +  G +G   DA
Sbjct: 2   SIFEYNGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHD-KLFVGLSGLGTDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D     +
Sbjct: 61  QTLYQRLVFRHKMYQLREERDMKPETFANLVSAVLYEKRFGPYFCQPVIAGLDDDDKPFI 120

Query: 121 ITGM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC--- 173
            T       E     +  GS       A  A        +E+     +A+  + D     
Sbjct: 121 CTMDFIGAKELAKDFVVAGSASESLYGACEAFFKPDMEPDELFEVVSQALLASVDRDCLS 180

Query: 174 -----VY--TNHNIVLETLKVGDE 190
                +Y  T  +I  + LK   +
Sbjct: 181 GWGGHIYIVTPDDIKEKILKGRMD 204


>gi|321249176|ref|XP_003191365.1| 20S proteasome beta-type subunit; Pre3p [Cryptococcus gattii WM276]
 gi|317457832|gb|ADV19578.1| 20S proteasome beta-type subunit, putative; Pre3p [Cryptococcus
           gattii WM276]
          Length = 213

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 55/180 (30%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+ DG VVI  D + + G  +      K+  +         +GS+AD   + + + + 
Sbjct: 1   MAVQFDGGVVIGADSRTTTGSYIANRVTDKLTHIHDRIYCC-RSGSAADTQAIADIVHQH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITL-VITGMGDVLEPE 131
            + Y +               +K     +  +         DK     V          +
Sbjct: 60  AQVYTSVYGSPPSVATAAALFEKLCYENKDQLSAGIIVAGWDKENGGSVYNIPLGGGMFQ 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      S EE     +  +S+A      +   I +  +   
Sbjct: 120 QPWAIGGSGSTYVYGYCDATYQEGWSEEETVKFVKNTLSLAMARDGSSGGCIRMCVITQD 179


>gi|300176555|emb|CBK24220.2| unnamed protein product [Blastocystis hominis]
          Length = 227

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 13/179 (7%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V M      + +  +T+L ++    V++  D   S G   M  N +++  L    +I GF
Sbjct: 14  VPMKRTTDPI-VTGSTVLAMKYRDGVMMCTDTLASYGSMSMFKNVQRMYVLKNN-VIIGF 71

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAK---------DWRMDKYLRNLEAMILI 112
            G  +D   ++E LEK L++   Q   S +  A            +  K       +++I
Sbjct: 72  DGEYSDFAHIVEELEKILDESIFQDDNSMLTAASTFNFLRAWLYNQRTKMEPLWNTIVVI 131

Query: 113 ADKTI-TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
             +     +          E    A   G  + L   R+L     + EE AR  +   A
Sbjct: 132 GLENQKPFLGIVDKLGAAYEENFTATSFGLYFCLPLLRSLYREDMTEEE-ARATLEECA 189


>gi|195038067|ref|XP_001990482.1| GH18224 [Drosophila grimshawi]
 gi|193894678|gb|EDV93544.1| GH18224 [Drosophila grimshawi]
          Length = 205

 Score = 79.6 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V IA D +  +    +  + +KV  +     + G  G   D 
Sbjct: 2   SILAYNGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFL-GLTGLQTDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITL 119
            T+ +RL  +   Y  +  R          +  +L          +              
Sbjct: 61  LTVRDRLMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPF 120

Query: 120 VITGM--GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICV 174
           +      G   EP++  +  G+           L       +   E+  ++M  A D   
Sbjct: 121 ICNMDLIGCPNEPDD-FVVAGTCAEQLYGMCETLWRPDLEPDQLFEVIAQSMVNAFDRDA 179

Query: 175 YTNHNIVLETLKVG 188
            +     +  ++  
Sbjct: 180 MSGWGATVFIIEKD 193


>gi|189193569|ref|XP_001933123.1| proteasome subunit beta type-1 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187978687|gb|EDU45313.1| proteasome subunit beta type-1 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 264

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 65/221 (29%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD + + G  +    A K+ ++G          I+
Sbjct: 32  HGFYPYTDNGGSTLGISGADFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGARIV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+  ++ Y  Q  +     A   R+   L N           + 
Sbjct: 92  LSVVGFAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAILG 151

Query: 119 L--------VITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
                    + +             A G+  S  +      ++                 
Sbjct: 152 GLDEEGKGALYSYDPVGSYEREQCRAAGAAASLIMPFLDNQVNFKNMYEPGSGTGHELKS 211

Query: 154 ------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                  ++  E++ R A + A +  +     + +  +   
Sbjct: 212 KQAQPLPRDHVEDLVRDAFTSAVERHIEVGDGLQMMIITKD 252


>gi|322708662|gb|EFZ00239.1| proteasome component C5 [Metarhizium anisopliae ARSEF 23]
          Length = 263

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 60/221 (27%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL-------GKGNII 58
            +      +  + L +      ++AGD + + G ++    A KV ++           I+
Sbjct: 31  HRFNPYTDNGGSTLGIAGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGSTSSQDDATIV 90

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ++L+   + Y  +  +     A   R+   L             + 
Sbjct: 91  LSVCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYVTAMLG 150

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNSA 158
            +         +             A G+ GS  +      ++                 
Sbjct: 151 GLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYVPGSGEGHNLQE 210

Query: 159 EE-----------IARKAMSIAADICVYTNHNIVLETLKVG 188
            E           I + A   A +  +     + +  +   
Sbjct: 211 RERHPLSRAQVETIIKDAFDGAVERHIEVGDALQMLIITKD 251


>gi|299117057|emb|CBN73828.1| 20S proteasome beta subunit [Ectocarpus siliculosus]
          Length = 252

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 59/173 (34%), Gaps = 15/173 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L ++    V++A D   S G      N  +++ +G+   + G +G  +D   ++E 
Sbjct: 34  GTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGE-CTLIGASGEYSDFQHIMET 92

Query: 75  LEKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITG 123
           LE   +      +   RS  E+    R   Y R  +   L                + + 
Sbjct: 93  LEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKDGTAFLGSV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADIC 173
                  E+ ++A G GG  AL   R           A  +    M +     
Sbjct: 153 DHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYRD 205


>gi|242096488|ref|XP_002438734.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
 gi|241916957|gb|EER90101.1| hypothetical protein SORBIDRAFT_10g025190 [Sorghum bicolor]
          Length = 204

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 58/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + ++V ++     I G +G + DA
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRVFKIHDKLYI-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D  +  +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDVPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++       +E+     +A++ + D  
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPDELFETISQALNSSVDRD 177


>gi|261331605|emb|CBH14599.1| 20S proteasome subunit [Trypanosoma brucei gambiense DAL972]
          Length = 255

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 13/191 (6%)

Query: 8   HYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           H    +   TTI+ V  +G VV+  D + + G  V     +K+  +    +  G AG++A
Sbjct: 21  HPPRTLKTGTTIVGVVFEGGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCG-AGTAA 79

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLV 120
           D   +       L  +     + S        + ++L   +        +   D     +
Sbjct: 80  DTEAVTNMTAANLTLHRLGTGKQSRVSEALTLLKRHLYRYQGHVSAALVLGGVDVGGAFL 139

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI----CVYT 176
            T            +A+GSG   A++A         + EE A++ +  A         Y+
Sbjct: 140 ATVAPHGSTDRLPFVAMGSGSIAAMAALETGYKENLTLEE-AKQLVVSAIHKGIFNDPYS 198

Query: 177 NHNIVLETLKV 187
              + L  +  
Sbjct: 199 GTQVDLCVITK 209


>gi|296109873|ref|YP_003616822.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
           infernus ME]
 gi|295434687|gb|ADG13858.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
           infernus ME]
          Length = 247

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 11/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +     V++A D +V+  + +   +  K+ ++      A     +     +  
Sbjct: 34  RGTTAVGIVCKDGVILAVDRRVTS-KLIKIRSIEKIYQIDDHVAAATSGLVADARVLIDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            RLE ++ +       S   LAK     K                +I   DK    +   
Sbjct: 93  ARLEAQIYRVTYGEEISIELLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKGEGRLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  E    AIGSG    +             EE  R A+  
Sbjct: 153 DPSGALIEYKATAIGSGRQTVMEILEKEYKEDMDLEEGLRLALYS 197


>gi|115469154|ref|NP_001058176.1| Os06g0643100 [Oryza sativa Japonica Group]
 gi|17380214|sp|Q9LST7|PSB3_ORYSJ RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit beta-3
 gi|8671506|dbj|BAA96836.1| beta 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|51535468|dbj|BAD37365.1| 20S proteasome subunit beta type 3 [Oryza sativa Japonica Group]
 gi|113596216|dbj|BAF20090.1| Os06g0643100 [Oryza sativa Japonica Group]
 gi|218198634|gb|EEC81061.1| hypothetical protein OsI_23870 [Oryza sativa Indica Group]
 gi|222635966|gb|EEE66098.1| hypothetical protein OsJ_22127 [Oryza sativa Japonica Group]
          Length = 204

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 58/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + ++V ++     I G +G + DA
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYI-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTITL 119
            TL +RL  + + Y  +  R             L  + R   Y        L  D    +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFI 120

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
                    E     +  G+       A  ++       EE+     +A+  + D  
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRD 177


>gi|58262948|ref|XP_568884.1| hypothetical protein CNB03070 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134108160|ref|XP_777278.1| hypothetical protein CNBB2630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259965|gb|EAL22631.1| hypothetical protein CNBB2630 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223534|gb|AAW41577.1| hypothetical protein CNB03070 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 213

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 55/180 (30%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+ DG VVI  D + + G  +      K+  +         +GS+AD   + + + + 
Sbjct: 1   MAVQFDGGVVIGADSRTTTGSYIANRVTDKLTHIHDRIYCC-RSGSAADTQAVADVVHQH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------LIADKTITL-VITGMGDVLEPE 131
            + Y +               +K     +  +         DK     V          +
Sbjct: 60  AQVYTSVYGSPPTVATAAALFEKLCYENKDQLSAGIIVAGWDKENGGSVYNIPLGGGMFQ 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      S EE     +  +S+A      +   I +  +   
Sbjct: 120 QPWAIGGSGSTYVYGYCDATYQEGWSKEETVKFVKNTLSLAMARDGSSGGCIRMCVITQD 179


>gi|57094636|ref|XP_532224.1| PREDICTED: similar to Proteasome subunit beta type 3 (Proteasome
           theta chain) (Proteasome chain 13) (Proteasome component
           C10-II) isoform 1 [Canis familiaris]
          Length = 204

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 55/193 (28%), Gaps = 15/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    + IA D +  +   ++  + +         +  G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCMAIAADRRFGIQAQMVTTDFQIFPMGD--RLYIGLAGLATDV 59

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITL 119
             + + L+ +L  Y  +  +          +   L          +              
Sbjct: 60  QAVAQCLKFRLNLYELKEGQQIKPYTLMSMVANLLYEKRFGPYYTEPVITGLDPKTFKPF 119

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          +  +  G+          +L       E +     +AM  A D    
Sbjct: 120 ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFENISQAMLNAVDRDAV 179

Query: 176 TNHNIVLETLKVG 188
           +   +++  ++  
Sbjct: 180 SGMGVIVHIIEKD 192


>gi|145255853|ref|XP_001399121.1| proteasome subunit beta type-4 [Aspergillus niger CBS 513.88]
 gi|134084718|emb|CAK43375.1| unnamed protein product [Aspergillus niger]
          Length = 260

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 71/200 (35%), Gaps = 25/200 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G     A+ +++R+ G  + I GF+G  +D   +   
Sbjct: 40  GTSVVAVKFNGGVAIAADNLASYGSLARFADVKRLRKFGD-SAIIGFSGDVSDMQYIDRL 98

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           LE   + +  +    +         + K  Y R  E   L                + + 
Sbjct: 99  LESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPLWNHILVAGFDGDKKPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAEEIARKAMSI-----AA 170
                      +A G G   A+   R L   +        + A    R+ + +     A 
Sbjct: 159 DLLGTTFSAPHLATGFGAHLAVPILRRLFPEERPLESITKDEAVAALRECIKVLWYRDAR 218

Query: 171 DICVYTNHNIVLETLKVGDE 190
            +  Y+   I  E +++ ++
Sbjct: 219 SLDKYSLAVITEEGVEIQED 238


>gi|121709886|ref|XP_001272559.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
 gi|119400709|gb|EAW11133.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
          Length = 260

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 20/193 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G     +N +++R  G+  +I GF+G  +D   +   
Sbjct: 40  GTSVVAVKFNGGVAIAADNLASYGSLARFSNVKRLRVFGESAVI-GFSGDVSDMQYIDRL 98

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           LE   + +  +              + K  Y R  E   L                + + 
Sbjct: 99  LESIDIRENYSTHGNMLNAKNLHTYLSKVFYKRRSEFNPLWNQVLVAGFDGDEQPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA--------RKAMSIAADICVY 175
                      +A G G   A+   R L   +   EEI         R+ + +       
Sbjct: 159 DLLGTTFSAPHLATGFGAHLAVPILRRLFPEERPIEEITKEEAVDALRECLKVLWYRDAR 218

Query: 176 TNHNIVLETLKVG 188
           +     L  +   
Sbjct: 219 SLDKFSLAVISKD 231


>gi|71745546|ref|XP_827403.1| proteasome subunit beta 2 [Trypanosoma brucei TREU927]
 gi|4218580|emb|CAA10208.1| proteasome subunit beta-2 [Trypanosoma brucei rhodesiense]
 gi|70831568|gb|EAN77073.1| proteasome beta 2 subunit, putative [Trypanosoma brucei]
          Length = 255

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 13/191 (6%)

Query: 8   HYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           H    +   TTI+ V  +G VV+  D + + G  V     +K+  +    +  G AG++A
Sbjct: 21  HPPRTLKTGTTIVGVVFEGGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCG-AGTAA 79

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLV 120
           D   +       L  +     + S        + ++L   +        +   D     +
Sbjct: 80  DTEAVTNMTAANLTLHRLGTGKQSRVSEALTLLKRHLYRYQGHVSAALVLGGVDVGGAFL 139

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI----CVYT 176
            T            +A+GSG   A++A         + EE A++ +  A         Y+
Sbjct: 140 ATVAPHGSTDRLPFVAMGSGSIAAMAALETGYKENLTLEE-AKQLVVSAIHKGIFNDPYS 198

Query: 177 NHNIVLETLKV 187
              + L  +  
Sbjct: 199 GTQVDLCVITK 209


>gi|303313738|ref|XP_003066878.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240106545|gb|EER24733.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032575|gb|EFW14527.1| proteasome component C5 [Coccidioides posadasii str. Silveira]
          Length = 259

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 63/220 (28%), Gaps = 37/220 (16%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG------KGNIIA 59
              Y    +  + L +      ++AGD +   G  +    A K+ ++G       G+II 
Sbjct: 28  HGFYPYTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGHIIL 87

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
              G SAD   L ERL+  ++ Y     +     A   R+   L +           +  
Sbjct: 88  SVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGG 147

Query: 120 --------VITGMGDVLEPENGVMAIGSGGSYALSAAR------------ALMSTQN--- 156
                   + +             A G+  S  +                A    +    
Sbjct: 148 LDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGELVQR 207

Query: 157 --------SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                   +A E+ R A + A +  +     +    +   
Sbjct: 208 TPEPLSRATALELVRDAFTSAVERHIEVGDGLQTMIITAD 247


>gi|119185113|ref|XP_001243373.1| hypothetical protein CIMG_07269 [Coccidioides immitis RS]
          Length = 259

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 63/220 (28%), Gaps = 37/220 (16%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG------KGNIIA 59
              Y    +  + L +      ++AGD +   G  +    A K+ ++G       G+II 
Sbjct: 28  HGFYPYTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGHIIL 87

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
              G SAD   L ERL+  ++ Y     +     A   R+   L +           +  
Sbjct: 88  SVVGFSADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGG 147

Query: 120 --------VITGMGDVLEPENGVMAIGSGGSYALSAAR------------ALMSTQN--- 156
                   + +             A G+  S  +                A    +    
Sbjct: 148 LDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYVKSAEHGGELVQV 207

Query: 157 --------SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                   +A E+ R A + A +  +     +    +   
Sbjct: 208 TPEPLSRATALELVRDAFTSAVERHIEVGDGLQTMIITAD 247


>gi|255625639|gb|ACU13164.1| unknown [Glycine max]
          Length = 204

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++     IA  +G + DA
Sbjct: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIA-LSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D+    +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  A+       EE+     +A+  + D  
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRD 177


>gi|195539356|ref|NP_001124197.1| proteasome subunit beta type-5 isoform 2 [Homo sapiens]
 gi|332223026|ref|XP_003260672.1| PREDICTED: proteasome subunit beta type-5-like isoform 3 [Nomascus
           leucogenys]
 gi|332223028|ref|XP_003260673.1| PREDICTED: proteasome subunit beta type-5-like isoform 4 [Nomascus
           leucogenys]
          Length = 160

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 41/132 (31%), Gaps = 10/132 (7%)

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            AG +AD       L ++   Y  +        A    +   +   + M L         
Sbjct: 1   MAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGW 60

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
           DK    +     +         ++GSG  YA        S       A ++AR+A+  A 
Sbjct: 61  DKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQAT 120

Query: 171 DICVYTNHNIVL 182
               Y+   + L
Sbjct: 121 YRDAYSGGAVNL 132


>gi|219126883|ref|XP_002183677.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404914|gb|EEC44859.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 204

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 62/204 (30%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +   ++ +     V IA D ++ +    +  +  KV  +G  + + G AG + D 
Sbjct: 2   SILEYNGAAMIAMAGKDCVGIAADRRLGVQLQTVATDFNKVFAMGPKSYV-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVEL-----AKDWRMDKYLRNLEAMILIAD---KTITLV 120
            TL   LE +   Y  +  R                +K         ++A    K    +
Sbjct: 61  QTLKNILEFRKNLYELKEEREMSPATLSHLLSTLLYEKRFGPYFVEPIVAGLNEKNKPFL 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--- 173
                       +  +  G+          +L       EE+     +A+  + D     
Sbjct: 121 SAMDLIGAPVQADDFVVSGTCTGNLYGMCESLYRPDLEPEELFETIAQALLSSVDRDAIS 180

Query: 174 -------VYTNHNIVLETLKVGDE 190
                  + T   +  + LK   +
Sbjct: 181 GWGGVVHIITKDGVTTKELKGRQD 204


>gi|332157782|ref|YP_004423061.1| proteasome subunit alpha [Pyrococcus sp. NA2]
 gi|331033245|gb|AEC51057.1| proteasome subunit alpha [Pyrococcus sp. NA2]
          Length = 260

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 62/187 (33%), Gaps = 11/187 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+ +  VV+A + +++  + +   +  K+ ++      A  G    +      
Sbjct: 35  RGATAVGVKCNEGVVLAVEKRITS-RLIEPESYEKIFQIDDHIAAASSGIIADARVLVNR 93

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGM 124
                +       +    +V + K   + +             A+++        +    
Sbjct: 94  ARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEKPELYETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYTNHNIVLE 183
                     +AIGSG + A++          + E+  + A+   A  I   +  +I + 
Sbjct: 154 PSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMTLEDAIKLAILALAKTIEKPSAESIEVA 213

Query: 184 TLKVGDE 190
            + V D+
Sbjct: 214 VITVKDK 220


>gi|320580955|gb|EFW95177.1| Beta 3 subunit of the 20S proteasome [Pichia angusta DL-1]
          Length = 191

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 52/181 (28%), Gaps = 15/181 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++      +  N  K+ +LG   +  G  G + D  T+ E    K  
Sbjct: 1   MVGKDCVAIACDLRLGNQSLGVANNFEKIFQLGH--VFLGLTGLATDVTTVYENFRMKTN 58

Query: 81  QYPNQLLRSSVELAKDWR--MDKYLRNLEAMI-------LIADKTITLVITGM-GDVLEP 130
            Y  +  R     +         Y R             + +      +        ++ 
Sbjct: 59  LYKMREEREIEPESFANLVSSSLYERRFGPWFVGPLVAGINSKTGKPFICGFDFIGCIDY 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+          +L       E++     +A+  AAD    +    V+  +  
Sbjct: 119 AKDFVVSGTATDQLYGMCESLYEPDLEPEDLFETISQALLNAADRDALSGWGAVVYVITK 178

Query: 188 G 188
            
Sbjct: 179 D 179


>gi|311697305|gb|ADQ00176.1| 20S proteasome beta subunit E type beta 5 [Chlamydomonas sp. ICE-L]
          Length = 170

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 10/132 (7%)

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------- 113
            AG +AD       L K+   Y     +     A    +   + +   M L         
Sbjct: 1   MAGGAADCQFWQRNLGKQCRLYELNNGKRITVCAASKLLANTMFSYRGMGLSMGTMVAGF 60

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAA 170
           D T   +     D    +    ++GSG  YA     +          A E+ R+A+  A 
Sbjct: 61  DATGPGLYYVDSDGQRTKGQRFSVGSGSLYAYGILDSGYKWDMPVDEAIELGRRAIYHAT 120

Query: 171 DICVYTNHNIVL 182
                +   + +
Sbjct: 121 FRDCASGGTVSV 132


>gi|242049832|ref|XP_002462660.1| hypothetical protein SORBIDRAFT_02g029840 [Sorghum bicolor]
 gi|241926037|gb|EER99181.1| hypothetical protein SORBIDRAFT_02g029840 [Sorghum bicolor]
          Length = 263

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V++A D   S G T+   +  +++ +GK +II G +G  +D   +L  
Sbjct: 44  GTSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSII-GASGEYSDFQEILRY 102

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-----------KTITLV 120
           L E  L  +      S         + +  Y R  +   L                   +
Sbjct: 103 LDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKGPKGDEKYL 162

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E   +A G G   A+   RA      +   A ++  K + +       + 
Sbjct: 163 GMVNMIGTHFEENHVATGFGNHLAIPILRAEWREDMTFEEAVKLVEKCLLVLLYRDRSSI 222

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 223 NKFQIAKITTE 233


>gi|121711373|ref|XP_001273302.1| proteasome component Pre3, putative [Aspergillus clavatus NRRL 1]
 gi|119401453|gb|EAW11876.1| proteasome component Pre3, putative [Aspergillus clavatus NRRL 1]
          Length = 229

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 50/179 (27%), Gaps = 11/179 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 29  MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVSYH 87

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDVLEPE 131
           L  Y      +           +     + M+                V +        +
Sbjct: 88  LNMYGIVNNEAPSTQVAAALFQELCYENKDMLSAGIIIAGYDPRHGGQVYSIPLGGSLHK 147

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKV 187
                 GSG +Y      A      + EE     R A+  A      +   I L  L  
Sbjct: 148 QSYAIAGSGSTYIYGYCDANWKENMTEEEGIDFVRGALQEAIKWDGSSGGVIRLVVLTR 206


>gi|225459609|ref|XP_002285871.1| PREDICTED: similar to PBC1 (20S proteasome beta subunit C1);
           peptidase isoform 1 [Vitis vinifera]
 gi|302141789|emb|CBI18992.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 56/177 (31%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D +  +    +  + +K+ R+     + G +G + DA
Sbjct: 2   SIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFL-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D+    +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADIC 173
            T       E     +  G+       A  A+       E   EI  +A+  + D  
Sbjct: 121 CTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRD 177


>gi|195439248|ref|XP_002067543.1| GK16137 [Drosophila willistoni]
 gi|194163628|gb|EDW78529.1| GK16137 [Drosophila willistoni]
          Length = 229

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 16/198 (8%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                   +  +I+ +  +  V IAGD + V+    ++  +  K+ +L     I G  G 
Sbjct: 21  HSFDPYVCNGGSIVAIAGEDFVTIAGDTRMVNEDDAIVSRSQSKLFQLTPMTAI-GSVGC 79

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV---- 120
            AD   ++  +++ +  Y    L+     A    +   + +           +  +    
Sbjct: 80  FADTLAVVNVIKQNIHMYQLTHLKRISTDALAQMLSISMYSHRFFPYFVSNIVAGIDRNG 139

Query: 121 ----ITGMGDVLEPENGVMAIGSGGSYALSAAR---ALMSTQNS---AEEIARKAMSIAA 170
                +             A G+G    + A       +    +   A EI RK M +A 
Sbjct: 140 KGAVFSYDPIGHHERKAYDAAGTGFELMIPAMDYFIKNLKEPLTIEIAAEITRKVMIVAD 199

Query: 171 DICVYTNHNIVLETLKVG 188
           +  VYT  + ++  +   
Sbjct: 200 NKDVYTGDSAIMYIITKN 217


>gi|258566702|ref|XP_002584095.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
 gi|237905541|gb|EEP79942.1| proteasome component PUP3 [Uncinocarpus reesii 1704]
          Length = 192

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 50/181 (27%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ +    +  N  K+        + G  G + D  ++ + +  K+ 
Sbjct: 1   MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYL-GLTGLATDVSSVSDLMRYKVN 59

Query: 81  QYPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTI----TLVITGMG-DVLEP 130
            Y  +  R          +      K         ++A          +        ++ 
Sbjct: 60  LYRLREERQISPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       EE+     +A+  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTASDQLFGMCEGLWEPDLGPEELFETVSQALLNAVDRDALSGWGAHVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|316971688|gb|EFV55434.1| proteasome subunit beta type-1 [Trichinella spiralis]
          Length = 297

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 61/204 (29%), Gaps = 22/204 (10%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGF 61
            + D+      +  T   +     V+++GD ++S     VM   A KV RL    +    
Sbjct: 80  ALSDRFNPYTENGGTCAGIAGKDFVILSGDTRLSASSMVVMSRTAPKVYRLTP-KVYMTG 138

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA-----D 114
            G   D   L++ L  +++QY           A    + +  Y R      + A     D
Sbjct: 139 TGFQGDMIQLVKVLRTRIQQYLFTFNEYMDIHAAAQLLSRTLYFRRFFPYYVGAIIGGID 198

Query: 115 KTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARA--LMSTQNS----------AEEI 161
           +     + +        E    A G G               TQ            A+++
Sbjct: 199 RDGRGVLYSYDPVGTIEELPYSAQGEGSYLIEPFFDNQIGWKTQPEQTKQPLSKERAQQL 258

Query: 162 ARKAMSIAADICVYTNHNIVLETL 185
              A     +    T   + +  L
Sbjct: 259 MHDAFISTIEREKSTGDAVQMVVL 282


>gi|71029220|ref|XP_764253.1| proteasome subunit beta type 3 [Theileria parva strain Muguga]
 gi|68351207|gb|EAN31970.1| proteasome subunit beta type 3, putative [Theileria parva]
          Length = 206

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 58/193 (30%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSAD 67
                +   ++ +  +G V IA D ++ L Q V + +N  K  ++ +    A  +G + D
Sbjct: 3   DITSYNGGAVVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAA-SGLATD 61

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
             TL E +  K+  Y  +  +          +   L +        D  I  +       
Sbjct: 62  VQTLKEEIMFKVNMYKLRGDKEMSVKTLSNMVGAMLYSRRFGPWFVDSVIAGLDNDSSPY 121

Query: 128 LEPEN---------GVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVY 175
           +   +           +  G+          AL       E++     + +    D    
Sbjct: 122 ITCFDLVGAPCTPSDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCL 181

Query: 176 TNHNIVLETLKVG 188
           +     +  +   
Sbjct: 182 SGWGAEVHVITPD 194


>gi|149235806|ref|XP_001523781.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452760|gb|EDK47016.1| proteasome component PUP3 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 212

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 56/213 (26%), Gaps = 30/213 (14%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     + IA D ++      +  +  K  +      +A   G + 
Sbjct: 1   MSDPFSINGGAAVAMIGKDCIAIASDLRLGSQSLGVLNHFEKTFQFLPHTFMA-LTGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILI------------ 112
           D  T+LE  + K   Y  +       L     +    Y R      +             
Sbjct: 60  DVTTVLELFKFKTNLYKLREEHYIEPLTLANLVSSLLYERRFGPWFVSPIVAGLEKVKGS 119

Query: 113 -ADKTITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMS 167
              +    +        ++  +  +  G+           L       EE+     + + 
Sbjct: 120 KNGEVKPFICGFDSIGCIDYSHDFIVSGTATDQLYGMCEGLYEPNLEPEELFETISQCLL 179

Query: 168 IAADIC----------VYTNHNIVLETLKVGDE 190
            A D            + T   ++  TLK   +
Sbjct: 180 NAVDRDALSGWGCVVHIITKDKVIKRTLKTRQD 212


>gi|160331440|ref|XP_001712427.1| prsB1 [Hemiselmis andersenii]
 gi|159765875|gb|ABW98102.1| prsB1 [Hemiselmis andersenii]
          Length = 217

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 13/194 (6%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +K  ++    TT++ +     ++I  D Q S G  V    + K+  L   +I+   +G
Sbjct: 1   MVNKENSM---GTTVVAIEIQDGILIGADSQTSSGPLVSNKISDKISYL-TRSIVCCRSG 56

Query: 64  SSADAFTLLERLEKKL--EQYPNQLLRSSVELAKDWRMDKYLRN-LEAMILIADKTI--- 117
           S+A     +E L   +    + ++       LA+ +R   Y  N + A  + A       
Sbjct: 57  SAAQTQNTIENLRSLVLNNLFESKFPPKVQNLAQIFREYCYKENTVNAGFICAGWDCFRG 116

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICV 174
             + +           ++ +GSG  +      A    + +    +    KA+S+A     
Sbjct: 117 GQIYSITQGGYVFNQSIILMGSGSIFIQGFCDANFKLKMNETQSKNFLIKALSLAILRDG 176

Query: 175 YTNHNIVLETLKVG 188
            +   I L  +   
Sbjct: 177 NSGSFIRLAKITKK 190


>gi|328875472|gb|EGG23836.1| proteasome subunit beta type 3 [Dictyostelium fasciculatum]
          Length = 201

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 57/189 (30%), Gaps = 15/189 (7%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  +   ++ +     V IA D +  +    +  N  KV R+       G +G   DA T
Sbjct: 1   MAYNGGAVIVMTGKNCVAIATDLRFGIQHQTVSNNHPKVYRI-NDKCFIGISGLVTDAQT 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM------ 124
           L ++L  +   Y  +  R          +   L          +  I  + T        
Sbjct: 60  LYQKLVFRHNLYKLREERDMTPQVLSNLVGNMLYEKRFGPYFTEPVICGLDTQDKPFISG 119

Query: 125 ----GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTN 177
               G  +  E+  + +G+           L     + +E+     + M  + +    + 
Sbjct: 120 MDLIGASVYTED-FLLVGTMTPAMYGLCETLYKKDMNEDELFETVSQCMLSSIERDAMSG 178

Query: 178 HNIVLETLK 186
               +  + 
Sbjct: 179 WGAEVTIIT 187


>gi|254586379|ref|XP_002498757.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
 gi|238941651|emb|CAR29824.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
          Length = 244

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 63/211 (29%), Gaps = 30/211 (14%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           + Y    +  T+L +  +   V+AGD + +   ++      KV   G   +I    G +A
Sbjct: 23  QFYPYTDNGGTVLGIAGEDFAVLAGDTRHTTDYSINSRYESKVFDCGDNIVI-TANGYAA 81

Query: 67  DAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITL- 119
           D   L++R +  ++ Y            S+    +     K         +IA       
Sbjct: 82  DGEALVKRFKNSVKWYHFDHNDKKLSLNSAARNIQHLLYGKRFFPYYVQTIIAGLDEEGK 141

Query: 120 --VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----------------NSAEE 160
             V +             A G+  S  +      ++                    S +E
Sbjct: 142 GAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFHNQYVPESNGRVKRPLKFLSVDE 201

Query: 161 ---IARKAMSIAADICVYTNHNIVLETLKVG 188
              + R A + A +  +     + +  +   
Sbjct: 202 VIRLVRDAFTSATERHIQVGDGLEILIVTKD 232


>gi|156056673|ref|XP_001594260.1| hypothetical protein SS1G_04067 [Sclerotinia sclerotiorum 1980]
 gi|154701853|gb|EDO01592.1| hypothetical protein SS1G_04067 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 260

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 68/209 (32%), Gaps = 28/209 (13%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T+++ ++    VVIA D   S G      + +++R+    +++ GF G  
Sbjct: 32  HTQSPI-VTGTSVVALKFKDGVVIAADNLASYGSLARFTDVKRLRKFADTSVV-GFGGDV 89

Query: 66  ADAFTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDKYLRN--------LEAMILIADKT 116
           +D   L   L+    E+  +    +         + K L             +++     
Sbjct: 90  SDMQYLDRLLQSLDTEEAYSASGHTLNARNLHKYLSKVLYKRRSDFNPLWNTLLVAGLDE 149

Query: 117 I--TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA-----EEIARKAMS-- 167
                + +         +  +A G G   A    R +      A     +E A +A+   
Sbjct: 150 HDKPFLASADLLGTTFSSPSLATGFGAHLAQPLLRKVA-PDEEATAKLTKEAALEAIKES 208

Query: 168 -------IAADICVYTNHNIVLETLKVGD 189
                   A  +  Y+   I  E + + +
Sbjct: 209 MKVLFYRDARSMDKYSIAVITKEGIDLKE 237


>gi|225712140|gb|ACO11916.1| Proteasome subunit beta type-1-A [Lepeophtheirus salmonis]
          Length = 238

 Score = 78.5 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 59/200 (29%), Gaps = 19/200 (9%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +    + ++ T L +      + A D + S   T+   N  K+ +L      +   G   
Sbjct: 27  QFGPYESNSGTTLAISTPEFNIFASDIRNSSSFTIHSRNCSKIFKLKNSITFSA-TGFFG 85

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D + + E L+ K E +  Q  +  +       +   L +           +  +      
Sbjct: 86  DIYRVFEILKHKQELFYQQFEKEMLVSELAHFLMNVLYSKRFFPFYGFIVLGGIENGECA 145

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARA-LMSTQN----------SAEEIARKAMSI 168
             +        ++     G+G         + +    N              I +KA   
Sbjct: 146 MYSYDPVGSYQKDTARCYGTGMKIVQPILDSKIYRKNNLKKEEEFKEEEIIAIVKKAFES 205

Query: 169 AADICVYTNHNIVLETLKVG 188
            ++  V T   + +  ++  
Sbjct: 206 VSERDVKTGDGVEIVIIRKD 225


>gi|302922344|ref|XP_003053446.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734387|gb|EEU47733.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 264

 Score = 78.5 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/221 (11%), Positives = 63/221 (28%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL-------GKGNII 58
            +      +  + L +      ++AGD + + G ++    + KV ++           ++
Sbjct: 32  HRFNPYTDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMSPKVFKIGGTTASQDDATLV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L + L+   + Y  +  +     A   R+   L         +   + 
Sbjct: 92  LSVVGFAADGEALRDHLDTICKIYRYRHGKPMTVNACAKRLSTVLYGKRFFPYYSHAMLG 151

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
            +         +             A G+ GS  +      ++ +N              
Sbjct: 152 GLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIMPFLDNQVNFKNQYIPESGEGHELKE 211

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                      E + + A   A +  +    N+ +  +   
Sbjct: 212 RERRPLTRTEVETLIKDAFDGAVERHIEVGDNLQMVIITRD 252


>gi|322493088|emb|CBZ28372.1| putative proteasome beta 3 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 205

 Score = 78.5 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 67/206 (32%), Gaps = 26/206 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     +++ +      VI  D ++      +     K+  +    +  G  G   D 
Sbjct: 2   SIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNDSIVY-GLTGLRTDQ 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVI 121
            T + +++ + + Y  +  R+    A    +   L         +E +I   DK+   V 
Sbjct: 61  QTFVNKVQFRTDMYKLREERNITGKAFSSMITSMLYEARFGPWFVEPVIGSIDKSTGKVY 120

Query: 122 ----TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADIC- 173
                 +G   EPE+  +  G+          AL     S E   EIA +AM  A D   
Sbjct: 121 LCATDLIGAPCEPED-YVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDS 179

Query: 174 ---------VYTNHNIVLETLKVGDE 190
                    + T   I    +K   +
Sbjct: 180 LSGYGAVAMIVTKDKITTRLIKGRKD 205


>gi|116206868|ref|XP_001229243.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88183324|gb|EAQ90792.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 265

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 66/228 (28%), Gaps = 50/228 (21%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
            +      +  + L +      ++AGD +++ G ++   +  K+ ++G          ++
Sbjct: 33  HRFDPYTDNGGSTLAIAGAKFSILAGDTRLTSGYSINSRHHPKLFKIGGTTADQKDATMV 92

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+   + Y  +  +     A   R+   L         +   + 
Sbjct: 93  LSVVGFAADGEALKERLDTICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYSHAILG 152

Query: 119 LV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
            +         +             A G+  S  +      ++ +N              
Sbjct: 153 GLDEEGNGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYIPNSGEGHALQE 212

Query: 157 ---------SAEEIARKAMSIAADI----------CVYTNHNIVLETL 185
                      E + + A   A +            + TN  I  E +
Sbjct: 213 RERRPLTRSEVEVLVKDAFDGAVERHIEVGDGLQMMIITNDGI--EEI 258


>gi|299743502|ref|XP_001835816.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
 gi|298405683|gb|EAU85881.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
          Length = 253

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 9/150 (6%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                 +  TIL V      VIAGD + S G  +    A KV +L    ++A   G +AD
Sbjct: 14  FNPYTENGGTILAVAGADFTVIAGDTRQSEGYNIQTRYAPKVFKLTDKAVLA-VNGFAAD 72

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------- 120
               +++++++LE Y +   +     +    +   L             +  +       
Sbjct: 73  GNMFVKKVKQRLEWYRHAHAKDMPIRSIARLIQTMLYARRFFPYYVYNILGGIEEDGTGA 132

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAAR 149
             +             A G+  S       
Sbjct: 133 VYSFDPVGSYERETCRAAGAAQSLVQPFLD 162


>gi|255558626|ref|XP_002520338.1| proteasome subunit beta type, putative [Ricinus communis]
 gi|223540557|gb|EEF42124.1| proteasome subunit beta type, putative [Ricinus communis]
          Length = 204

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 58/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++     + G +G + DA
Sbjct: 2   SIFEYNGSALIAMVGKNCFAIASDRRLGVQLQTIATDFQRIYKIHDRLFL-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D+    +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMNPETFASLVSALLYEKRFGPYFCQPVIAGLSDENKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++      AEE+     +A+  + D  
Sbjct: 121 CTMDSIGAKELARDFVVAGTASESLYGACESMFKPDLEAEELTEIISQALLSSVDRD 177


>gi|320164183|gb|EFW41082.1| proteasome subunit beta type-3 [Capsaspora owczarzaki ATCC 30864]
          Length = 192

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           ++  G V IA D +  +    +  + +K  ++G    I G AG + D  T+  +L+ ++ 
Sbjct: 1   MKGKGCVAIAADRRFGIQAQTVSTDFQKTFKMGDRLFI-GLAGLATDVQTVASKLQFRVN 59

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG----------DVLEP 130
            Y  +  RS         +   L          +  I  +    G             + 
Sbjct: 60  MYHLREERSVAPETFMNIVANVLYEKRFGPFFIEPVIAGLDPVSGEPFVAATDLIGCPDV 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKV 187
            +    +G+          ++       E   E+  + +    D    +    V+  ++ 
Sbjct: 120 ADDFAVVGTASEQLYGMCESMYEPNLEPEDLFEVVSQCLMNGCDRDAISGWGAVVHIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|295658156|ref|XP_002789640.1| proteasome component PRE3 [Paracoccidioides brasiliensis Pb01]
 gi|226283125|gb|EEH38691.1| proteasome component PRE3 [Paracoccidioides brasiliensis Pb01]
          Length = 214

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 1   MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVHYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDVLEPE 131
           L  Y                  +   + + M+                V +        +
Sbjct: 60  LGMYGIVNKEPPTTQTAAALFQELCYDNKDMLSAGIIIAGYDQRHGGQVYSIPLGGSLHK 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      + E   E  + ++  A      +   I +  L   
Sbjct: 120 QSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQEAIKWDGSSGGVIRMVVLTAK 179


>gi|119567806|gb|EAW47421.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
           CRA_b [Homo sapiens]
          Length = 166

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 1/114 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGL 141


>gi|71003984|ref|XP_756658.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
 gi|46095730|gb|EAK80963.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
          Length = 189

 Score = 78.1 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 57/181 (31%), Gaps = 13/181 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +  +++  +    VVIA D ++      +  N  KV R+ +   + G  G ++D 
Sbjct: 2   SIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYV-GLPGLASDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMIL------IADKTITLV 120
            TL ER   ++  Y  +  R          +    Y R      +      I  K    +
Sbjct: 61  ATLKERFRYRVNMYKMKEERDIEPEIFANLVSSTLYERRFGPYFIEPVIAGINSKDEPFI 120

Query: 121 ITGM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYT 176
                   L      +  G+        A  L       EE+     + +  A +    +
Sbjct: 121 AASDVVGCLNFAKDFVVSGTASDKLFGMAEGLWEPDLGPEELFETVSQILLGALERDALS 180

Query: 177 N 177
            
Sbjct: 181 G 181


>gi|255954391|ref|XP_002567948.1| Pc21g09090 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589659|emb|CAP95806.1| Pc21g09090 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 199

 Score = 78.1 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 11/179 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 1   MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVSYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDVLEPE 131
           L  Y      +               +    L A I++A         V +        +
Sbjct: 60  LNMYGVTNAEAPTTQVAASLFQELCYENKDALSAGIILAGWDARHGGQVFSIPLGGSLHK 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKV 187
                 GSG +Y      A    Q + EE     R A+  A      +   I L  L  
Sbjct: 120 QPFAIGGSGSTYIYGYTDAHWREQMTEEEGIDFVRSALQEAIKWDGSSGGVIRLVVLTK 178


>gi|18977943|ref|NP_579300.1| proteasome subunit alpha [Pyrococcus furiosus DSM 3638]
 gi|23821988|sp|Q8U0L6|PSA_PYRFU RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|18893713|gb|AAL81695.1| proteasome, subunit alpha (multicatalytic endopeptidase complex
           alpha subunit) [Pyrococcus furiosus DSM 3638]
          Length = 260

 Score = 78.1 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 61/189 (32%), Gaps = 15/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+    VV+A + +++  + +   +  K+ ++      A  G    +      
Sbjct: 35  RGATAVGVKCGEGVVLAVEKRITS-RLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNR 93

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGM 124
                +       +    SV + K   + +             A+++        +    
Sbjct: 94  ARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDRPELYETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIV 181
                     +AIGSG + A++              A ++A  A++   +    +  NI 
Sbjct: 154 PSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMENP--SADNIE 211

Query: 182 LETLKVGDE 190
           +  + V D+
Sbjct: 212 VAVITVKDK 220


>gi|313228966|emb|CBY18118.1| unnamed protein product [Oikopleura dioica]
          Length = 203

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 53/161 (32%), Gaps = 10/161 (6%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           A + +  +I+ +  D  V IA D +       +  +  K+ ++     I G +G + D  
Sbjct: 2   AFQYNGGSIVGMSGDNCVCIASDNRYGQQLHTISTDFPKIFKITDKIFI-GLSGLATDIQ 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------DKTITLV 120
           T+L +++ K+  Y  +  R          +   L         A         D T  L 
Sbjct: 61  TVLNKIKYKVNMYELRENRKMSPKCFKTMVSNLLYERRFGPFFAEPVIVALNDDGTTMLC 120

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                   E     +  G+  +     A A       AEE+
Sbjct: 121 GMDCLGAAESPKDYVVAGTAANEMHGLAEAYWRPDMPAEEL 161


>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
 gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
          Length = 204

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     T++ +  D  V IA D ++    T +  + +KV ++    +  G AG  +DA
Sbjct: 2   SIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTD-KVYVGLAGFQSDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
            T+LE++  +   Y  +  R          +                      D     +
Sbjct: 61  RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDSNKPYI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--- 173
                   +      +A+G+G  Y L             +E+     +++    +     
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAAS 180

Query: 174 -----VY--TNHNIVLETLKVGDE 190
                VY  T   + + T+K   +
Sbjct: 181 GWGAVVYTITKDKVNVSTIKARMD 204


>gi|119607989|gb|EAW87583.1| proteasome (prosome, macropain) subunit, beta type, 7, isoform
           CRA_b [Homo sapiens]
 gi|194382666|dbj|BAG64503.1| unnamed protein product [Homo sapiens]
          Length = 142

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 1/92 (1%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D + + G  V   N  K+  +       G AG++AD     + 
Sbjct: 43  GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCG-AGTAADTDMTTQL 101

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
           +   LE +     R    +  +  + + L   
Sbjct: 102 ISSNLELHSLSTGRLPRVVTANRMLKQMLFRF 133


>gi|332030043|gb|EGI69868.1| Proteasome subunit beta type-6 [Acromyrmex echinatior]
          Length = 197

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           +    +  VVI  D + + G  V    A K+ R+         +GS+AD   + + +   
Sbjct: 1   MACEFNDGVVIGADSRGTTGTYVSNRFADKLTRVTDYIYCC-RSGSAADTQAIADIVAYH 59

Query: 79  LEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGDVLEPE 131
           L  +  +L    +              Y  +L A IL+A         V +     +   
Sbjct: 60  LGLHQMELGTPPLVETAANVFREICYNYRDSLMAGILVAGWDKQKGGQVYSIPIGGMCVR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
             +   GSG +Y      A   +  S +E   +    +++A      +   I    +   
Sbjct: 120 QPISIGGSGSTYVYGYVDAQYKSNMSKDECLGLVENTLALAMARDGSSGGVIRTGVITEK 179


>gi|330925823|ref|XP_003301210.1| hypothetical protein PTT_12656 [Pyrenophora teres f. teres 0-1]
 gi|311324271|gb|EFQ90697.1| hypothetical protein PTT_12656 [Pyrenophora teres f. teres 0-1]
          Length = 191

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 51/181 (28%), Gaps = 15/181 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ +    +  N  K+ + G   +  G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGMQALTVSNNFPKIFQYGD--VFLGLTGLATDVSTVSDLFRYKVN 58

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R+                 R   Y  +     +        +        ++ 
Sbjct: 59  MYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDSIGCIDF 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       E++     +A+  A D    +     +  ++ 
Sbjct: 119 AKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEK 178

Query: 188 G 188
            
Sbjct: 179 D 179


>gi|148679385|gb|EDL11332.1| proteasome (prosome, macropain) subunit, beta type 10, isoform
           CRA_b [Mus musculus]
          Length = 159

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 34/128 (26%), Gaps = 7/128 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V++  D + +    V   +  K+  +       G AG +AD       
Sbjct: 29  GTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCG-AGVAADTEMTTRM 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVL 128
              K+E +     R          + + L   +  +         D     +        
Sbjct: 88  AASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVDLNGPQLYEVHPHGS 147

Query: 129 EPENGVMA 136
                  A
Sbjct: 148 YSRLPFTA 155


>gi|68060726|ref|XP_672353.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56489346|emb|CAI05284.1| hypothetical protein PB300285.00.0 [Plasmodium berghei]
          Length = 237

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 69/214 (32%), Gaps = 45/214 (21%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +  +  V++AGD ++SL  ++   N  K+ ++     I G +G  +D  TL   L+
Sbjct: 11  TGIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITD-KCIIGSSGMQSDIKTLHSLLQ 69

Query: 77  KKLEQY---------------------------PNQLLRSSVELAKDWRMDKYLRNLEAM 109
             L+ +                            +    S   +AK   +  Y R     
Sbjct: 70  VLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPY 129

Query: 110 -----ILIADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------TQNS 157
                +   D+     + +        ++     GSG S  L      +           
Sbjct: 130 YTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLILPILDNRVEQKNQLIKNMD 189

Query: 158 ---AEEI--ARKAMSIAADICVYTNHNIVLETLK 186
               ++I   + AM+ A +  +YT     +  + 
Sbjct: 190 FNLRDDINFVKDAMTSATERDIYTGDKAEIYIID 223


>gi|255627485|gb|ACU14087.1| unknown [Glycine max]
          Length = 204

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 56/177 (31%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++     I G +G + DA
Sbjct: 2   SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFI-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D     +
Sbjct: 61  QTLYQRLLFRHKLYQLREERDMKPQTFASLVSAILYEKRFGPYFCQPVIAGLGDDDKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++       EE+     +A+  + D  
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEPEELFETISQALLSSVDRD 177


>gi|238578402|ref|XP_002388706.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
 gi|215450229|gb|EEB89636.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
          Length = 165

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 13/161 (8%)

Query: 1   MVVMGD----KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN 56
           MV +G     +      +  TIL +      VIAGD + S G ++    A KV RL    
Sbjct: 4   MVSLGQPQQRQFNPYSENGGTILAIGGANFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKA 63

Query: 57  IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT 116
           ++A   G +AD    ++++ ++LE Y +   +     A    +   L             
Sbjct: 64  VLA-VNGFAADGNMFVKKVRQRLEWYRHAHAKDMPLRAIARLIQTMLYARRFFPYYVYNI 122

Query: 117 ITLV--------ITGMGDVLEPENGVMAIGSGGSYALSAAR 149
           +  +         +             A G+  S       
Sbjct: 123 LGGIEEDGSGAVYSFDPVGSYERESCRAAGAAQSLVQPFLD 163


>gi|315229924|ref|YP_004070360.1| proteasome subunit alpha [Thermococcus barophilus MP]
 gi|315182952|gb|ADT83137.1| proteasome subunit alpha [Thermococcus barophilus MP]
          Length = 260

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+    VV+A + +V+  + +   +  K+ ++      A  G    +      
Sbjct: 35  RGATAVGVKCKEGVVLAVEKRVTS-RLIEPESYEKIFQIDDHIAAASSGIIADARVLVDR 93

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-------AMILIADKTITLVITGM 124
                +       + +  +V + K   + +             A+++        +    
Sbjct: 94  ARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEKPELFETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKA-MSIAADICVYTNHNIVLE 183
                 E   +AIGSG + A++          + E+  + A +++A  +   +  NI + 
Sbjct: 154 PSGAYFEWKAVAIGSGRNTAMAIFEEKYRDDMTLEDAIKLAVLALAKTMEEPSPENIEVA 213

Query: 184 TLKV 187
            + V
Sbjct: 214 VITV 217


>gi|325090712|gb|EGC44022.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 217

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 50/177 (28%), Gaps = 11/177 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ +     V++  D + + G  +      K+ ++         +GS+AD   + + 
Sbjct: 30  GTSIMAINFKHGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADI 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           +   L  Y                          +     +    V +        +   
Sbjct: 89  VSYHLGMYGVVNQERPTTQTAA-------AAGIIIAGYDARHGGQVYSIPLGGSLHKQSY 141

Query: 135 MAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKVG 188
              GSG +Y      A      + E   E  + ++  A      +   I +  L   
Sbjct: 142 AIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQEAIKWDGSSGGVIRMVVLTEK 198


>gi|169601484|ref|XP_001794164.1| hypothetical protein SNOG_03608 [Phaeosphaeria nodorum SN15]
 gi|160705938|gb|EAT88813.2| hypothetical protein SNOG_03608 [Phaeosphaeria nodorum SN15]
          Length = 198

 Score = 77.7 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 1   MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVHYH 59

Query: 79  LEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDVLEPE 131
           L  Y                           L A ++IA         V +        +
Sbjct: 60  LGMYGITNDEPPTTQTAAAIFQELCYSNKDQLSAGMIIAGWDQRHGGQVYSIPLGGSLHK 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      S E+     + A++ A      +   I +  L   
Sbjct: 120 QSYAIGGSGSTYIYGYCDANWKEGMSEEDGISFVKGALAEAIKWDGSSGGVIRMVVLTAK 179


>gi|157871480|ref|XP_001684289.1| proteasome beta 3 subunit [Leishmania major strain Friedlin]
 gi|68127358|emb|CAJ04676.1| putative proteasome beta 3 subunit [Leishmania major strain
           Friedlin]
          Length = 205

 Score = 77.7 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 65/206 (31%), Gaps = 26/206 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     +++ +      VI  D ++      +     K+  +    +  G  G   D 
Sbjct: 2   SIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNNSIVY-GLTGLRTDQ 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVI 121
            T   +++ + + Y  +  R     A    +   L         +E +I   DK+   V 
Sbjct: 61  QTFANKVQFRTDMYKLREERDITGKAFAAMITSMLYEARFGPWFVEPVIGSIDKSTGEVY 120

Query: 122 ----TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADIC- 173
                 +G   EPE+  +  G+          AL     S E   EIA +AM  A D   
Sbjct: 121 LCATDLIGAPCEPED-YVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDS 179

Query: 174 ---------VYTNHNIVLETLKVGDE 190
                    + T   I    +K   +
Sbjct: 180 LSGYGAVAMIVTKDKITTRLIKGRKD 205


>gi|212723668|ref|NP_001131526.1| hypothetical protein LOC100192865 [Zea mays]
 gi|194691764|gb|ACF79966.1| unknown [Zea mays]
          Length = 263

 Score = 77.7 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V++A D   S G T+   +  +++ +GK +II G +G  +D   +L  
Sbjct: 44  GTSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSII-GASGEFSDFQEILRY 102

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-----------KTITLV 120
           L E  L  +      S         + +  Y R  +   L                   +
Sbjct: 103 LDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKGPKGDEKYL 162

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E   +A G     A+   RA      +   A ++  K + +       + 
Sbjct: 163 GMVNMIGTHFEENHVATGFANHLAIPILRAEWREDMTFEEAVKLVEKCLLVLLYRDRSSI 222

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 223 NKFQIAKITTE 233


>gi|225684870|gb|EEH23154.1| V Chain V [Paracoccidioides brasiliensis Pb03]
          Length = 198

 Score = 77.7 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 49/180 (27%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 1   MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVHYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRM-------DKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L  Y                           LR    +     +    V +        +
Sbjct: 60  LGMYGIVNKEPPTTQTAAALFQELCYDNKDMLRAGIIIAGYDQRHGGQVYSIPLGGSLHK 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      + E   E  + ++  A      +   I +  L   
Sbjct: 120 QSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQEAIKWDGSSGGVIRMVVLTAK 179


>gi|217075224|gb|ACJ85972.1| unknown [Medicago truncatula]
          Length = 204

 Score = 77.7 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 55/177 (31%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++     I G +G + D+
Sbjct: 2   SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFI-GLSGLATDS 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +             +                      D     +
Sbjct: 61  QTLYQRLVFRHKLYQLREECDMKPETFASLVSSMQYEKRFGPYFCQPVIAGLGDDDKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++      AEE+     +A+  + D  
Sbjct: 121 CTMDAIGAKELAKDFVVAGTASESLYGACESMFKPDMEAEELFETISQALLSSVDRD 177


>gi|268530996|ref|XP_002630624.1| C. briggsae CBR-PBS-3 protein [Caenorhabditis briggsae]
 gi|187037536|emb|CAP24202.1| CBR-PBS-3 protein [Caenorhabditis briggsae AF16]
          Length = 204

 Score = 77.7 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     T++ +  D  V IA D ++    T +  + +KV ++    +  G AG  +DA
Sbjct: 2   SIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTD-KVYVGLAGFQSDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
            T+LE++  +   Y  +  R          +                      D     +
Sbjct: 61  RTVLEKIMFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--- 173
                   +      +A+G+G  Y L             +E+     +++    +     
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAAS 180

Query: 174 -----VY--TNHNIVLETLKVGDE 190
                VY  T   + + T+K   +
Sbjct: 181 GWGAVVYTITKDKVNISTIKARMD 204


>gi|313215198|emb|CBY42868.1| unnamed protein product [Oikopleura dioica]
          Length = 188

 Score = 77.7 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 9/151 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VVI  D + S G  ++     K+ ++ +       +GS+AD   +   
Sbjct: 39  GTTIMAVEFDGGVVIGADSRTSAGAYIVNRVTDKLTKVHERIYCC-RSGSAADTQFIATA 97

Query: 75  LEKKLEQY-PNQLLRSSVELAKDWRMDKYLRNLEAMI-------LIADKTITLVITGMGD 126
           ++ +LE +       +           +Y                        V +    
Sbjct: 98  VKTRLEGHAIMIDEENPSVETAATLFKEYCYEYRDQFSAGILVAGWDPVEGGQVFSIPLG 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS 157
            ++    V   GSG ++             S
Sbjct: 158 GMKIRQKVAIGGSGSTWIYGLVDNQFKEGMS 188


>gi|217644449|gb|ABD61730.2| 26S proteasome beta subunit [Lupinus albus]
          Length = 127

 Score = 77.3 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 1/110 (0%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + L       V++A D + S+G  +   + +K+  +    ++   AG +AD       L 
Sbjct: 1   STLAFIFKDGVMVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHRNLG 59

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
            K   +     R          +   L +   M       I         
Sbjct: 60  IKCRLHELANKRRISVTGASKLLANILYSYRRMGYSVGTMIAGWDETGPG 109


>gi|154340181|ref|XP_001566047.1| proteasome beta 3 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063366|emb|CAM39542.1| putative proteasome beta 3 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 205

 Score = 77.3 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 26/206 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     +++ +      VI  D ++      +     K+  +   +++ G  G   D 
Sbjct: 2   SIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISMEVPKLHIV-NDSVVYGLTGLRTDQ 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVI 121
            T   ++E ++  Y  +  R     A    ++  L         +E +I   DKT   V 
Sbjct: 61  QTFANKVEFRINMYKLREERDITGKAFAAMIESMLYEARFGPWFVEPVIGSIDKTTGEVY 120

Query: 122 ----TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADIC- 173
                 +G   EPE+  +  G+          AL     S E   EIA +AM  A D   
Sbjct: 121 LCATDLIGAPCEPED-YVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDS 179

Query: 174 ---------VYTNHNIVLETLKVGDE 190
                    + T   I+   +K   +
Sbjct: 180 LSGYGAVALIVTKEKIITRLIKGRKD 205


>gi|295672922|ref|XP_002797007.1| proteasome component C5 [Paracoccidioides brasiliensis Pb01]
 gi|226282379|gb|EEH37945.1| proteasome component C5 [Paracoccidioides brasiliensis Pb01]
          Length = 266

 Score = 77.3 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/223 (10%), Positives = 64/223 (28%), Gaps = 40/223 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
                   +  + L +  +   ++AGD +   G ++    + K+ ++G+        +++
Sbjct: 32  HGFNPYTDNGGSTLGIAGEDYAILAGDTRSVTGYSINTRYSPKLFKIGEDDEGGEGAHLV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+  ++ Y  +  +     A   R+   L +           + 
Sbjct: 92  LSVVGFAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHAILG 151

Query: 119 L--------VITGMGDVLEPENGVMAIGSGGSYALSAARALMS----------------- 153
                    + +             A G+  S  +      ++                 
Sbjct: 152 GIDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYVAGTGEGNALDK 211

Query: 154 --------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                       A ++   A + A +  +     + +  +   
Sbjct: 212 QPREPQPQPAEDALQLVNDAFTSAVERHIEVGDGLQIMLITKD 254


>gi|21553663|gb|AAM62756.1| putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]
          Length = 204

 Score = 77.3 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 57/177 (32%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++    +  G +G + D 
Sbjct: 2   SIFEYNVSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD-RVFIGLSGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L        +         D     +
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  A+      AEE+     +A+  + D  
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRD 177


>gi|195639560|gb|ACG39248.1| proteasome subunit beta type 4 precursor [Zea mays]
          Length = 263

 Score = 77.3 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V++A D   S G T+   +  +++ +GK +II G +G  +D   +L  
Sbjct: 44  GTSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSII-GASGEFSDFQEILRY 102

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-----------KTITLV 120
           L E  L  +      S         + +  Y R  +   L                   +
Sbjct: 103 LDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKGPKGDEKYL 162

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E   +A G     A+   RA      +   A ++  K + +       + 
Sbjct: 163 GMVNMIGTHFEENHVATGFANHLAIPILRAEWREDMTFEEAVKLVEKCLLVLLYRDRSSI 222

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 223 NKFQIAKITTE 233


>gi|17380183|sp|O65084|PSB3_PICMA RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit beta-3
 gi|2982322|gb|AAC32146.1| probable proteasome subunit [Picea mariana]
 gi|116784298|gb|ABK23292.1| unknown [Picea sitchensis]
          Length = 204

 Score = 77.3 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 55/177 (31%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ ++    +  G +G + D 
Sbjct: 2   SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHD-KLYVGLSGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +R   + + Y  +  R+         +   L                  +     +
Sbjct: 61  QTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  ++       EE+     +A+  + D  
Sbjct: 121 CTMDSIGAKELAKDFVVAGTAAESLYGACESMYKPDMEPEELFETISQALLSSIDRD 177


>gi|25956178|emb|CAC82730.1| HslVU complex proteolytic subunit [Trypanosoma cruzi]
          Length = 117

 Score = 77.3 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 53/105 (50%), Positives = 76/105 (72%), Gaps = 2/105 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADA 68
           A +   TTIL+VRK   VV+ GD QV+LG+  V K++A K+R++    +I GFAGS+ADA
Sbjct: 14  ACQSRQTTILSVRKGDTVVLIGDRQVTLGERIVAKSSACKLRKINDDIVI-GFAGSTADA 72

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
             L+E+LE K+ ++P QL R++VELAKDWR D+ LR LEA +++ 
Sbjct: 73  IALMEKLENKVGEFPQQLTRAAVELAKDWRTDRALRRLEASLIVC 117


>gi|242208948|ref|XP_002470323.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730630|gb|EED84484.1| predicted protein [Postia placenta Mad-698-R]
          Length = 220

 Score = 77.3 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 51/180 (28%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+    VVI  D + + G  +      K+  +         +GS+AD   + + +   
Sbjct: 1   MAVQFKDGVVIGADSRTTTGSYIANRVTDKLTHIHDRIYCC-RSGSAADTQAIADIVHYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTI---TLVITGMGDVLEPE 131
            + Y      +           K     +    A I++A         V           
Sbjct: 60  FQVYSQTHGEAPPVHTVANVFQKLCYENKDALSAGIIVAGWDKEVGPSVYNIPLGGGLFR 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A        ++     R  +++A      +   I +  +   
Sbjct: 120 QPWAIGGSGSTYVYGYCDATYQDGWDRDQTINFVRNTLALAMSRDGSSGGVIRMCVITED 179


>gi|148642305|ref|YP_001272818.1| proteasome subunit alpha [Methanobrevibacter smithii ATCC 35061]
 gi|222444524|ref|ZP_03607039.1| hypothetical protein METSMIALI_00136 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350937|ref|ZP_05976354.1| proteasome subunit alpha [Methanobrevibacter smithii DSM 2374]
 gi|166199288|sp|A5UJS2|PSA_METS3 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|148551322|gb|ABQ86450.1| proteasome, alpha subunit, PsmA [Methanobrevibacter smithii ATCC
           35061]
 gi|222434089|gb|EEE41254.1| hypothetical protein METSMIALI_00136 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860275|gb|EFC92573.1| proteasome subunit alpha [Methanobrevibacter smithii DSM 2374]
          Length = 250

 Score = 77.3 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 69/191 (36%), Gaps = 17/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    +V+A D + +    V   +  K+ ++ +    A  +G  ADA  L+E
Sbjct: 34  RGTTSIGIKCSEGIVLAVDKRTTS-NLVEATSIEKIFKIDEHIGAAT-SGLVADARALVE 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIAD--KTITLVIT 122
           R   + +             +   ++   L         R   + ++I      I  +  
Sbjct: 92  RARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNGGVRPFGSALIIGGVYDGICKLFE 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                   E    AIGSG S A+               A  +A  A++ A +    T +N
Sbjct: 152 TDPSGALIEYKATAIGSGRSAAMDIFEDQYKDDMNLNEAINLALTAINEATEHET-TANN 210

Query: 180 IVLETLKVGDE 190
           + +  +K G+E
Sbjct: 211 VEIAVIKCGEE 221


>gi|189193797|ref|XP_001933237.1| proteasome subunit beta type-9 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187978801|gb|EDU45427.1| proteasome subunit beta type-9 precursor [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 224

 Score = 77.3 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 53/180 (29%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++A D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 27  MAINFKDGVILAADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVHYH 85

Query: 79  LEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL---VITGMGDVLEPE 131
           L  Y                           L A ++IA         V +        +
Sbjct: 86  LGMYGTTNDEPPTTQTAAAIFQELCYSNKDQLSAGLIIAGWDHRHGGQVYSIPLGGSLHK 145

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      + EE     + A+S A      +   I +  L   
Sbjct: 146 QSYAIGGSGSTYIYGYCDANWKEGMTEEEGIKFVKGALSEAIKWDGSSGGVIRMVVLTGK 205


>gi|159476310|ref|XP_001696254.1| hypothetical protein CHLREDRAFT_187099 [Chlamydomonas reinhardtii]
 gi|158282479|gb|EDP08231.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 204

 Score = 77.3 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 58/204 (28%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
                +   I+ +     V I  D +  +    M  +  KV ++     + G +G   DA
Sbjct: 2   SIFSYNGAAIVAMAGKECVAIGSDLRFGVQLQTMTCDTPKVYKIHDKLYL-GLSGLQTDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------DKTITL 119
            TL ++L+ +   Y  +  R          +   L         A         D T  L
Sbjct: 61  TTLHQKLQFRHNLYKLREERDMKPSTFGHMLSNALYERRFGPYFAAPVVAGLEPDGTPYL 120

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC--- 173
                   +E     M  G+          ++       +E+     + +    D     
Sbjct: 121 CGMDTIGAIESAKDFMITGTSPESLYGMCESMWRPDMEPDELFETVAQCLMSGCDRDALA 180

Query: 174 -------VYTNHNIVLETLKVGDE 190
                  V T   +V  TLK   +
Sbjct: 181 GWGAVVHVITKDKVVSRTLKTRMD 204


>gi|119567807|gb|EAW47422.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
           CRA_c [Homo sapiens]
          Length = 147

 Score = 77.3 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 1/114 (0%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   ++A D ++S G ++   ++ K  +L    +I G +G   
Sbjct: 29  RFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVI-GCSGFHG 87

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           D  TL + +E +L+ Y +   ++    A    +   L +           I  +
Sbjct: 88  DCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGL 141


>gi|156088863|ref|XP_001611838.1| proteasome A-type and B-type family protein [Babesia bovis]
 gi|154799092|gb|EDO08270.1| proteasome A-type and B-type family protein [Babesia bovis]
          Length = 205

 Score = 77.3 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 61/204 (29%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                +   ++ +  +G V IA D ++ + GQ  + +N  K  ++      A   G + D
Sbjct: 3   DIESYNGGAVVAMVGNGCVAIACDKRLGMNGQHTISSNFPKAFKVTDTAYFAA-CGLATD 61

Query: 68  AFTLLERLEKKLEQYPNQ--LLRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITLV 120
             T+   +E K   Y  +         LA       Y R      + +     DK    +
Sbjct: 62  IQTMKSEIEFKTNMYALRCEKNMGVKTLAHMVGSLLYSRRFGPWFVSSVVAGLDKDTPHI 121

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--- 173
                          + +G+          +L        E+     + +  A D     
Sbjct: 122 YCFDLIGAPCNAKDFVVVGTCSEQLYGICESLYRPNMEPSELFETISQCLMAAIDRDCLS 181

Query: 174 -------VYTNHNIVLETLKVGDE 190
                  + T   I + TLK   +
Sbjct: 182 GWGAEVHMITPEKITVSTLKTRMD 205


>gi|323508047|emb|CBQ67918.1| probable PUP3-20S proteasome subunit beta3 [Sporisorium reilianum]
          Length = 204

 Score = 77.3 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 60/192 (31%), Gaps = 13/192 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +  +++  +    VVIA D ++      +  N  KV R+ +   + G  G ++D 
Sbjct: 2   SIMEYNGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYV-GLPGLASDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVE--LAKDWRMDKYLRNLEAMIL------IADKTITLV 120
            TL ER   ++  Y  +  R       A       Y R      +      I  K    +
Sbjct: 61  ATLKERFRYRVNMYKMKEERDIEPEIFAHLVSSTLYERRFGPYFIEPVIAGINSKNEPFI 120

Query: 121 ITGM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYT 176
                   L      +  G+        A  L       EE+     + +  A +    +
Sbjct: 121 AASDVVGCLNFAKDFVVSGTAADKLFGMAEGLWEPDLGPEELFETVSQILLGALERDALS 180

Query: 177 NHNIVLETLKVG 188
               ++  +   
Sbjct: 181 GWGAIVRVITPN 192


>gi|226292461|gb|EEH47881.1| proteasome component Pre4 [Paracoccidioides brasiliensis Pb18]
          Length = 260

 Score = 77.3 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 17/177 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T+++ V+ +G V IA D   S G      + +++R      ++ GF G  
Sbjct: 32  HTQSPI-VTGTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRPFHNNAVL-GFGGDV 89

Query: 66  ADAFTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------- 114
           +D   +   L    +++  +    +         + K  Y R  +   L  +        
Sbjct: 90  SDMQFIDRHLNSLDIDENYSTYGHTLNAQNLHTYLSKLMYRRRSQFNPLWNNILVAGFDT 149

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAMS 167
                + +            +A G G   A+   R L       E+I    A KA+ 
Sbjct: 150 NGQPFLSSVDLLGSTYSAPSLATGFGAHLAIPVLRRLFPEDRPLEQITEEEAVKALK 206


>gi|225680768|gb|EEH19052.1| proteasome component PRE4 [Paracoccidioides brasiliensis Pb03]
          Length = 260

 Score = 77.3 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 17/177 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T+++ V+ +G V IA D   S G      + +++R      ++ GF G  
Sbjct: 32  HTQSPI-VTGTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRPFHNNAVL-GFGGDV 89

Query: 66  ADAFTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------- 114
           +D   +   L    +++  +    +         + K  Y R  +   L  +        
Sbjct: 90  SDMQFIDRLLTSLDIDENYSTYGHTLNAQNLHTYLSKLMYRRRSQFNPLWNNILVAGFDT 149

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAMS 167
                + +            +A G G   A+   R L       E+I    A KA+ 
Sbjct: 150 NGQPFLSSVDLLGSTYSAPSLATGFGAHLAIPVLRRLFPEDRPLEQITEEEAVKALK 206


>gi|84997075|ref|XP_953259.1| proteasome beta 3 subunit [Theileria annulata strain Ankara]
 gi|65304255|emb|CAI76634.1| proteasome beta 3 subunit, putative [Theileria annulata]
          Length = 220

 Score = 77.3 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 59/193 (30%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSAD 67
                +   ++ +  +G V IA D ++ L Q V + +N  K  ++ +    A  +G + D
Sbjct: 17  DITSYNGGALVAMMGEGCVAIACDKRLGLNQQVTVSSNFPKAFKVTESCFFAA-SGLATD 75

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
             TL + +  K+  Y  +  +          +   L +        D  I  + T     
Sbjct: 76  VQTLKDEIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDTDSSPY 135

Query: 128 LEPEN---------GVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVY 175
           +   +           +  G+          AL       E++     + +    D    
Sbjct: 136 ITCFDLVGAPCTPTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCL 195

Query: 176 TNHNIVLETLKVG 188
           +     +  +   
Sbjct: 196 SGWGAEVHVITPD 208


>gi|240273184|gb|EER36706.1| proteasome component [Ajellomyces capsulatus H143]
 gi|325089210|gb|EGC42520.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 266

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 68/223 (30%), Gaps = 40/223 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD +   G  +    A K+ ++G+G       +++
Sbjct: 32  HGFYPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDEGGEGAHLV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMIL 111
               G +AD   L ERL+  ++ Y  +  +     A   R+   L         + A++ 
Sbjct: 92  LSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILA 151

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNS- 157
             D+     + +             A G+  S  +      ++                 
Sbjct: 152 GMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNAMDK 211

Query: 158 ------------AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                       A ++   A + A +  +     + +  +   
Sbjct: 212 QPRPSEPPPRDVALQLVNDAFTSAVERHIEVGDGLQVMVITRE 254


>gi|225554384|gb|EEH02683.1| proteasome component C5 [Ajellomyces capsulatus G186AR]
          Length = 266

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 68/223 (30%), Gaps = 40/223 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
              Y    +  + L +      ++AGD +   G  +    A K+ ++G+G       +++
Sbjct: 32  HGFYPYTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDEGGEGAHLV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMIL 111
               G +AD   L ERL+  ++ Y  +  +     A   R+   L         + A++ 
Sbjct: 92  LSVVGFAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILA 151

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQNS- 157
             D+     + +             A G+  S  +      ++                 
Sbjct: 152 GMDEDGKGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYLPGSGEGNAMDK 211

Query: 158 ------------AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                       A ++   A + A +  +     + +  +   
Sbjct: 212 QPRPSEPPPRDVALQLVNDAFTSAVERHIEVGDGLQVMVITRE 254


>gi|212537587|ref|XP_002148949.1| proteasome component Pup3, putative [Penicillium marneffei ATCC
           18224]
 gi|210068691|gb|EEA22782.1| proteasome component Pup3, putative [Penicillium marneffei ATCC
           18224]
          Length = 192

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 48/181 (26%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ +    +  N  K+        + G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYL-GITGLATDVTTVSDLFRYKVN 59

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R                  R   Y  +     +        +        ++ 
Sbjct: 60  MYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       +++     +A+  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGANVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|169601776|ref|XP_001794310.1| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
 gi|160706006|gb|EAT88967.2| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
          Length = 309

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 63/202 (31%), Gaps = 21/202 (10%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T++L  +    VVIA D   S G      + +++R+     ++ GF G  
Sbjct: 81  HTQSPI-VTGTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRKF-NDEVVVGFGGDV 138

Query: 66  ADAFTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADK 115
           +D   L   L    + +  +    +         + K + N  +         +I   D 
Sbjct: 139 SDMQYLDRLLNSLDIRETYSSNETALNAKNLHTYLAKVMYNRRSKFDPLWNHLLIAGMDG 198

Query: 116 T-ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEIARKAM 166
                + +         +  +A G G   A    R ++  + S        A E  ++ M
Sbjct: 199 ESKPFLASADLLGTTFSSPSLATGFGAHLAQPILRTILPDEASVEKVTKEQAVEKIKECM 258

Query: 167 SIAADICVYTNHNIVLETLKVG 188
            +       +     +  +   
Sbjct: 259 KVLFYRDARSMDKYSIAVITKE 280


>gi|47203769|emb|CAG14438.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 156

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 13/140 (9%)

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILI 112
              AG++AD     + +   LE +     R+      +  + + L   +        +  
Sbjct: 1   CCGAGTAADTEMTTQLISSNLELHALSTGRAPRVATANRMLKQMLFRYQGYIGAALVLGG 60

Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
            D     + +        +   + +GSG   A++              A+++ R A  IA
Sbjct: 61  MDCNGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDLEEAEAKQLVRDA--IA 118

Query: 170 ADI--CVYTNHNIVLETLKV 187
           A I   + +  NI +  +  
Sbjct: 119 AGIFNDLGSGSNIDVCVITK 138


>gi|322705602|gb|EFY97186.1| 20S proteasome subunit [Metarhizium anisopliae ARSEF 23]
          Length = 261

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 65/217 (29%), Gaps = 34/217 (15%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                 + +  T+++ ++    VVIA D   S G      + +++R     +++ GF+G 
Sbjct: 31  AHTQQPI-VTGTSVIAIKFKDGVVIAADNLASYGSLARFTDVKRLRPFADASVV-GFSGD 88

Query: 65  SADAFTLLERLE--KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------- 113
            +D   L   L      E Y +              + K L    +              
Sbjct: 89  ISDMQYLDRHLTDLALTEAYDSPDSARLNASNLHRYLSKLLYRRRSKFDPLWNHLLVAGL 148

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---------NSAEEIAR 163
            DK    +              +A G G   A    R   +             A +I +
Sbjct: 149 DDKGAPFLAAADLLGTTYSAPSLATGFGAMLAQPVMR-RYAPDEESAAKLTREEAVDIIK 207

Query: 164 KAMSI-----AADICVY-----TNHNIVLETLKVGDE 190
           + M +     A  +  Y     T   + L+  +  ++
Sbjct: 208 ECMKVLFYRDARSLDSYSLAIVTKDGVELKENQKLED 244


>gi|315045602|ref|XP_003172176.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
 gi|311342562|gb|EFR01765.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
          Length = 261

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
              Y    +  + L +  D   ++AGD +   G  +    A KV ++G        G+II
Sbjct: 29  HSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINSRYAPKVFKIGADEHTGEGGHII 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMIL 111
               G SAD   L ERL+  ++ Y     +     A   R+   L         + A++ 
Sbjct: 89  LCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILA 148

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
             D+     + +             A GS  S  +      ++ 
Sbjct: 149 GVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNF 192


>gi|298711226|emb|CBJ32446.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 204

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 61/204 (29%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +   IL +     V I  D ++      +  +  K+ ++G   ++ G  G + D 
Sbjct: 2   SILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGD-KLMVGLPGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ E L  +L  Y  +  R          M   L          +  +  +       +
Sbjct: 61  ITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKEDNTPFI 120

Query: 129 E---------PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--- 173
                       +  +  G+  +       +        +E+     + +  + D     
Sbjct: 121 SAFDLIGAPVVTDDFVVGGTCTNNLYGMCESFYRPDMDKDELFETMAQCLLTSVDRDALS 180

Query: 174 -------VYTNHNIVLETLKVGDE 190
                  + T   I+ +TLK   +
Sbjct: 181 GWGGVVHIITPEGIMSKTLKGRQD 204


>gi|323453685|gb|EGB09556.1| hypothetical protein AURANDRAFT_24138 [Aureococcus anophagefferens]
          Length = 230

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 19/196 (9%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +  ATT+  V  +  VV+  D + + G  +  ++  K+  L      AG  G++ADA  L
Sbjct: 16  QTRATTLAGVVFEHGVVLGADSRATTGSIIADSSCDKLHPLCGNCW-AGGCGTAADADEL 74

Query: 72  LERLEKKLEQYPNQLLRSSVELAKD--------------WRMDKYLRNLEAMILIADKTI 117
              +   +     +   +++                    R+         ++   D T 
Sbjct: 75  TRHVALDIRLRGLRAATTAIAAPAAVDVATVDEARGLLRRRLKSSRLQCGFVLGGVDATG 134

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS----TQNSAEEIARKAMSIAADIC 173
             +     D     +   A+GSG   A++   A       +++ A  + R A+       
Sbjct: 135 PKLYRVEPDGATASSKYAAMGSGQFGAIARIEAARHAPTASRDDAIGVVRCAIEAGIACD 194

Query: 174 VYTNHNIVLETLKVGD 189
             +   + L  ++ GD
Sbjct: 195 TGSGGEVHLVVIEPGD 210


>gi|239614938|gb|EEQ91925.1| proteasome component [Ajellomyces dermatitidis ER-3]
          Length = 198

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 1   MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVSYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDVLEPE 131
           L  Y                  +   + + M+                V +        +
Sbjct: 60  LGMYGVVNQEPPTTQTAAALFQELCYDNKDMLSAGIIIAGYDPRHGGQVYSIPLGGSLHK 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      + E   E  + ++  A      +   I +  L   
Sbjct: 120 QSYAIGGSGSTYIYGYCDAKWREGMTEEEGIEFVKTSLQEAIKWDGSSGGVIRMVVLTAK 179


>gi|55377332|ref|YP_135182.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
 gi|74553042|sp|Q5V4S6|PSB1_HALMA RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
           proteasome beta subunit 1; AltName: Full=Proteasome core
           protein PsmB 1; Flags: Precursor
 gi|55230057|gb|AAV45476.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
          Length = 240

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 56/173 (32%), Gaps = 10/173 (5%)

Query: 25  GVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP 83
             VVIA D + SLG   V   N +KV  +     +    GS   A + +  L  ++  Y 
Sbjct: 56  DGVVIATDMRASLGGRFVSNKNVQKVEEIHPTAAL-TLVGSVGGAQSFIRTLRAEVNLYE 114

Query: 84  NQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVLEPENGVMAIG 138
            +        A       + R      +       D     V +        ++     G
Sbjct: 115 ARRGEDISMKALSTLAGNFARGGPFFAINPILGGVDDDGHHVYSIDPAGGVMKDDYTVTG 174

Query: 139 SGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           SG + A            +   A+E+A  ++  AA+    + + I L  +   
Sbjct: 175 SGLTVAYGTLEDRYEEDMTNEEAKEVAAASIKAAAERDTGSGNGIYLADVTAD 227


>gi|312210111|emb|CBX90198.1| similar to proteasome subunit beta type-4 [Leptosphaeria maculans]
          Length = 276

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 70/209 (33%), Gaps = 26/209 (12%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T++L  + +  VVIA D   S G      + +++R+     ++ GF G  
Sbjct: 48  HTQSPI-VTGTSVLAAKFNDGVVIAADNLASYGSLARFTDVKRLRKF-NDEVVVGFGGDV 105

Query: 66  ADAFTLLERL----------EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK 115
           +D   L   L            + +     L     ++  + R          +I+  D 
Sbjct: 106 SDMQYLDRLLNSLDIRENYSSSESQLNAKNLHTYLAKVMYNRRSKFDPLWNHLLIVGMDG 165

Query: 116 T-ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAEEIARKAM 166
                + +         +  +A G G   A    R ++  +          A E  ++ M
Sbjct: 166 ESKPFLASADLLGTTFSSPSLATGFGAHLAQPILRTILPDEAAVAKVTKEQAVEKIKECM 225

Query: 167 SI-----AADICVYTNHNIVLETLKVGDE 190
            +     A  +  Y+   +  E +++ ++
Sbjct: 226 KVLFYRDARSMDKYSIAVVTKEGVELDED 254


>gi|115400898|ref|XP_001216037.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114189978|gb|EAU31678.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 260

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 25/200 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G      + +++R     + I GF+G  +D   +   
Sbjct: 40  GTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRVFSD-SAIVGFSGDVSDMQYIDRL 98

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           L+   + +  +              + K  Y R  E   L                + + 
Sbjct: 99  LQSIDIRENYSSHGNMLNAKNLHTYLSKVLYKRRSEFNPLWNHLLVVGFDGDKKPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK----AM---------SIAA 170
                      +A G G   A+   R L   +   E+I ++    A+           A 
Sbjct: 159 DLLGTTYSAPHLATGFGAHLAIPILRRLFPEERPVEQITKEEAVAALRECLKVLWYRDAR 218

Query: 171 DICVYTNHNIVLETLKVGDE 190
            +  Y+   I    +++ ++
Sbjct: 219 SLDKYSLAIITEGGIEMHED 238


>gi|17535357|ref|NP_494913.1| Proteasome Beta Subunit family member (pbs-3) [Caenorhabditis
           elegans]
 gi|17380195|sp|Q23237|PSB3_CAEEL RecName: Full=Proteasome subunit beta type-3; Short=Proteasome
           subunit beta 3
 gi|1280152|gb|AAA98018.1| Proteasome beta subunit protein 3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 204

 Score = 76.9 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     T++ +  D  V IA D ++    T +  + +KV ++    +  G AG  +DA
Sbjct: 2   SIMSYTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTD-KVYVGLAGFQSDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLV 120
            T+LE++  +   Y  +  R+         +                      D     +
Sbjct: 61  RTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--- 173
                   +      +A+G+G  Y L             +E+     +++    +     
Sbjct: 121 CCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAAS 180

Query: 174 -----VY--TNHNIVLETLKVGDE 190
                VY  T   + + T+K   +
Sbjct: 181 GWGAVVYTITKDKVNVSTIKARMD 204


>gi|328787541|ref|XP_393321.4| PREDICTED: proteasome subunit beta type-6-like [Apis mellifera]
          Length = 210

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 52/178 (29%), Gaps = 19/178 (10%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +   T+I+    DG VVI  D + + G  +    A K+ ++           +       
Sbjct: 29  QSTGTSIMACEFDGGVVIGADSRATTGAYISNRFADKLTKITDYIYCCRSGSAIEPLVET 88

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
              + ++L       L + + +A                    +    V +     +   
Sbjct: 89  AANVFRELCYNYRDSLMAGILVA----------------GWDSRKGGQVYSVPIGGMCVR 132

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETLK 186
             +   GSG +Y      +      S  E   +    +++A      +   I +  + 
Sbjct: 133 QPISIGGSGSTYVYGYMDSQYKPNMSKNECVKLVENTLALAMSRDGSSGGVIRIGVIT 190


>gi|261188327|ref|XP_002620579.1| proteasome component [Ajellomyces dermatitidis SLH14081]
 gi|239593258|gb|EEQ75839.1| proteasome component [Ajellomyces dermatitidis SLH14081]
          Length = 198

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 50/180 (27%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 1   MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAIADIVSYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDVLEPE 131
           L  Y                  +   + + M+                V +        +
Sbjct: 60  LGMYGVVNQEPPTTQTAAALFQELCYDNKDMLSAGIIIAGYDPRHGGQVYSIPLGGSLHK 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      + E   E  + ++  A      +   I +  L   
Sbjct: 120 QSYAIGGSGSTYIYGYCDAKWREGMTEEEGIEFVKTSLQEAIKWDGSSGGVIRMVVLTAK 179


>gi|308799175|ref|XP_003074368.1| proteasome subunit Y (ISS) [Ostreococcus tauri]
 gi|116000539|emb|CAL50219.1| proteasome subunit Y (ISS) [Ostreococcus tauri]
          Length = 240

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 61/188 (32%), Gaps = 16/188 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    DG VV+  D +VS G  V    + K+  L +   I   +GS+AD   L   
Sbjct: 11  GTTIVACEYDGGVVLGADTRVSTGVYVSNRASDKMMALSE-CAIMCRSGSAADTEALGGF 69

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------------ILIADKTITLVIT 122
           + + +E+   +    +          K     + M                 +    V  
Sbjct: 70  VRRVVEEREVEHGEPADVKTVATIATKIAYQNKGMNQGRGLSAYTIVGGWDKRNGPQVYA 129

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHN 179
                   +      GSG +Y             + EE      +A+++A  +   +   
Sbjct: 130 STAGGNMVKERWTTDGSGSTYIWGFLDDGWREGMTREECEAFVARAIALAMSVDGSSGGC 189

Query: 180 IVLETLKV 187
           I L T+  
Sbjct: 190 IRLNTVDK 197


>gi|324507472|gb|ADY43167.1| Proteasome subunit beta type-1 [Ascaris suum]
          Length = 253

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 56/202 (27%), Gaps = 23/202 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVS-LGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
                   +   +  D   +IA D ++S     ++  +A K+  L    I+A  +G   D
Sbjct: 40  NPYSFEGGSTAALAGDNFAIIASDTRMSQFEINILTRDAEKIHVLNNSIILAC-SGFYGD 98

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------- 120
              L   LE +L +Y                + + L             +  +       
Sbjct: 99  VLQLKRLLEARLHKYRFDYRGDMTVDLCAELLARNLYYRRFFPYYTGSILAGIDEDGKGA 158

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNS---AEEIARKAM 166
             +             A GS     +      +              +   A  + + A 
Sbjct: 159 VFSYDPIGCIERLQYTASGSAEPMIMPFLDCQVGHVTLTGDVEKPPLTIERATSLMKDAF 218

Query: 167 SIAADICVYTNHNIVLETLKVG 188
            ++A+  + T   I L   + G
Sbjct: 219 RVSAEREICTGDKIHLVIAERG 240


>gi|225680862|gb|EEH19146.1| proteasome subunit beta type-3 [Paracoccidioides brasiliensis Pb03]
 gi|226292563|gb|EEH47983.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb18]
          Length = 192

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 49/181 (27%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  K+        + G  G + D  T+ + L  K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYL-GLTGLATDVSTVSDVLRFKVN 59

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R                  R   Y  +     +        +        ++ 
Sbjct: 60  MYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       E++     +A+  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTASEQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|20093823|ref|NP_613670.1| proteasome subunit alpha [Methanopyrus kandleri AV19]
 gi|23821987|sp|Q8TYB7|PSA_METKA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|19886746|gb|AAM01600.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
          Length = 246

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 15/188 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L ++ +  VV+  D +V+  + +   +  KV ++      A     +     +  
Sbjct: 35  RGTTALGIKVEEGVVLGVDKRVTS-KLIEPESIEKVYQIDTHIGAATAGLVADARVLVER 93

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E +  +Y          L K     K +              +I   D     +   
Sbjct: 94  ARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
                  E+   AIG G   AL           +   A E+A +A+  A+     T  N+
Sbjct: 154 DPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEAS-REETTADNL 212

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 213 EIAVVDKQ 220


>gi|66825821|ref|XP_646265.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
 gi|74858609|sp|Q55D66|PSB3_DICDI RecName: Full=Proteasome subunit beta type-3
 gi|60474299|gb|EAL72236.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
          Length = 205

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 53/191 (27%), Gaps = 14/191 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +    + +     V IA D +  + Q  +  +  KV R+       G +G   DA
Sbjct: 2   SIMAYNGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRI-NDKCFVGISGLVTDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITL 119
            TL ++L  +   Y  +  R          +   L                L        
Sbjct: 61  QTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLEGPDNTPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           +            +  + +G+           L     + +++     + M  + D    
Sbjct: 121 ISGMDLIGASVATDDFLVVGTMTPAMYGVCETLYKKDMNEDDLFETISQCMLASLDRDAL 180

Query: 176 TNHNIVLETLK 186
           +    ++  + 
Sbjct: 181 SGWGAIVHVIT 191


>gi|299756258|ref|XP_002912180.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
 gi|298411595|gb|EFI28686.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
          Length = 205

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 57/194 (29%), Gaps = 17/194 (8%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  +  +++ +     V IA D ++      + ++ ++V  +     + G  G + D  T
Sbjct: 1   MDHNGGSVIAMLGKDCVAIASDLRLGNQALGIASDFQRVFPMTDRIYL-GLPGLATDVAT 59

Query: 71  LLERLEKKLEQYPNQLLRSSVE--LAKDWRMDKYLRNLEAMIL----------IADKTIT 118
           L ER   ++  Y  +  R       A       Y R                    K   
Sbjct: 60  LHERFRFRVNMYTIKEGREIEPEVFAHLVSSTLYERRFGPYFCEPVMAGISKTPTGKIKP 119

Query: 119 LVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
            +        L      +  G+  +     A  L       E++     + M  A D   
Sbjct: 120 FIAATDLIGCLNYAKDFVVAGTASAKLYGVAEGLWEPDLEPEDLFETISQTMLNAVDRDA 179

Query: 175 YTNHNIVLETLKVG 188
           ++    V+  L   
Sbjct: 180 FSGWGAVVHVLTKD 193


>gi|326476802|gb|EGE00812.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
 gi|326484480|gb|EGE08490.1| proteasome component PRE3 [Trichophyton equinum CBS 127.97]
          Length = 228

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 54/179 (30%), Gaps = 11/179 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + ++  
Sbjct: 28  MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVKYH 86

Query: 79  LEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTITL--VITGMGDVLEPE 131
           L  Y     R     ++  L ++   D        +I+          V +        +
Sbjct: 87  LGMYGVVYGRQPTTQTAAALFQELCYDNKDALSAGIIIAGYDERHGGQVYSIPLGGSLHK 146

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETLKV 187
                 GSG +Y      A            E  + ++  A      +   I +  L  
Sbjct: 147 QPYAIGGSGSTYIYGYCDANWRENMDEAEGVEFVKNSLREAIKWDGSSGGVIRMVVLTR 205


>gi|164660592|ref|XP_001731419.1| hypothetical protein MGL_1602 [Malassezia globosa CBS 7966]
 gi|159105319|gb|EDP44205.1| hypothetical protein MGL_1602 [Malassezia globosa CBS 7966]
          Length = 159

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 49/159 (30%), Gaps = 11/159 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V  DG VVI  D + ++G  +      K+  L         +GS+AD   L + +   
Sbjct: 1   MAVAFDGGVVIGADSRTTMGPYIANRVTDKLTHLSDRIYCC-RSGSAADTQALADVVTYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDVLEPE 131
           L+ Y     +                +    L A I++A         V          E
Sbjct: 60  LQLYSVMQEQQPPTAVAANLFQELIYQNKDRLTAGIIVAGWDKFHGGRVFNVPLGGGVFE 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMS 167
                 GSG +Y      +      + E   E  R  M 
Sbjct: 120 QPWAIGGSGSAYIYGYCDSTWREGWNQEQTLEFVRNGMY 158


>gi|146091504|ref|XP_001470046.1| proteasome beta 3 subunit [Leishmania infantum]
 gi|146095967|ref|XP_001467656.1| proteasome beta 3 subunit [Leishmania infantum JPCM5]
 gi|134084840|emb|CAM69238.1| putative proteasome beta 3 subunit [Leishmania infantum JPCM5]
 gi|322500341|emb|CBZ35418.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 205

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 62/205 (30%), Gaps = 24/205 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     +++ +      VI  D ++      +     K+  +    +  G  G   D 
Sbjct: 2   SIMSYSGGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNDSIVY-GLTGLRTDQ 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVI 121
            T   +++ + + Y  +  R     A    +   L         +E +I   DK+   V 
Sbjct: 61  QTFANKVQFRTDMYKLREERDITGKAFAAMITSMLYEARFGPWFVEPVIGSIDKSTGEVY 120

Query: 122 TGMGDVLE---PENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADIC-- 173
               D++         +  G+          AL     S E   EIA +AM  A D    
Sbjct: 121 LCATDLIGAPCEPQDYVCAGTAAESLHGMCEALWRPGMSPEEVFEIAAQAMLSACDRDSL 180

Query: 174 --------VYTNHNIVLETLKVGDE 190
                   + T   I    +K   +
Sbjct: 181 SGYGAVAMIVTKDKITTRLIKGRKD 205


>gi|162606488|ref|XP_001713274.1| 26S proteasome, beta-1 SU [Guillardia theta]
 gi|12580740|emb|CAC27058.1| 26S proteasome, beta-1 SU [Guillardia theta]
          Length = 198

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 13/176 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI++++    ++I  D +V++G  +   N+ KV +L K  +    +G SAD   L ++
Sbjct: 8   GTTIISLKYINGIIIGSDSKVNIGSFISNRNSDKVFQLSKFIVCC-RSGKSADNQNLCDK 66

Query: 75  LEKKL--EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT-----LVITGMGDV 127
           L+  +  +++         E+ +  +   Y  NLE  ++ A    T      +IT  G +
Sbjct: 67  LKNYVIEKEFIYGRHVLVREVVQFIKTLMYNCNLECTMICAGWDCTNGFQNYLITNGGGL 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
           ++    ++  G G +Y         +   S EE   +  K++SIA +    +   I
Sbjct: 127 IQ--KSIIVNGGGSNYISGLIDNNFNETMSLEECEKLITKSLSIAINKDTRSGGII 180


>gi|167043476|gb|ABZ08173.1| putative Proteasome A-type and B-type [uncultured marine
           microorganism HF4000_APKG2H5]
          Length = 418

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 17/189 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+  D ++S  + V+  +  K+ ++     I   +G  ADA  L+E
Sbjct: 215 RGTTTVGLKYRDGVVLIVDKRISS-KLVIADSIEKMYQIDDHIGITT-SGLVADARQLVE 272

Query: 74  RLEKKLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIA--DKTITLVIT 122
           R   + +        S    A         + +     +R     +LIA  D     +  
Sbjct: 273 RARIQCQVNRMTYGDSIAVTALVKKMCDHKQSFTQYGGVRPFGTALLIAGIDNDGIHLYE 332

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHN 179
                        AIG G S  +    +      +   A ++  +A+S + +  + +   
Sbjct: 333 TDPSGAYQSYQAGAIGRGRSSVIDYFESKWKNNMTQNAAIKLGLEALSESLEDDINS-DT 391

Query: 180 IVLETLKVG 188
           + +  +   
Sbjct: 392 VEIAIVNSD 400


>gi|327304499|ref|XP_003236941.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
 gi|326459939|gb|EGD85392.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
          Length = 261

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
              Y    +  + L +  D   ++AGD +   G  +    A KV ++G        G+II
Sbjct: 29  HSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHII 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMIL 111
               G SAD   L ERL+  ++ Y     +     A   R+   L         + A++ 
Sbjct: 89  LCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILA 148

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
             D+     + +             A GS  S  +      ++ 
Sbjct: 149 GVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNF 192


>gi|303313742|ref|XP_003066880.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240106547|gb|EER24735.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320032577|gb|EFW14529.1| proteasome component Pre4 [Coccidioides posadasii str. Silveira]
          Length = 261

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 67/215 (31%), Gaps = 27/215 (12%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M         + +  T+++ V+ DG V IA D   S G      + +++R     +++ G
Sbjct: 27  MGPQTHTQSPI-VTGTSVVAVKFDGGVAIAADNLASYGSLARFQDVKRLRAFDNSSVV-G 84

Query: 61  FAGSSADAFTLLERLEK--KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI-------- 110
           F G  +D   +   L      E Y +    +         + K L    +          
Sbjct: 85  FGGDVSDMQYIDRLLNSLDIRENYSSYGQHTLNAKNLHTYLSKMLYRRRSEFNPLWNHIL 144

Query: 111 --LIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK---- 164
                      + +            +A G G   A+   R L       E I ++    
Sbjct: 145 VAGFDQDGKPFLSSADLLGTTFSAPSLATGFGAHLAIPILRRLFPEGTPIESITKEQAVS 204

Query: 165 AMS---------IAADICVYTNHNIVLETLKVGDE 190
           A+           A  +  Y+   I  + +++ ++
Sbjct: 205 ALKECMKVLYYRDARSLDKYSIAVITKDGVELKED 239


>gi|260798450|ref|XP_002594213.1| hypothetical protein BRAFLDRAFT_65062 [Branchiostoma floridae]
 gi|229279446|gb|EEN50224.1| hypothetical protein BRAFLDRAFT_65062 [Branchiostoma floridae]
          Length = 135

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 5   GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           G+ +  ++  H TT L  +    V++A D + + G  +     +KV  +    ++   AG
Sbjct: 60  GEGNVKIEFDHGTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPY-LLGTMAG 118

Query: 64  SSADAFTLLERLEKKLE 80
            +AD       L ++  
Sbjct: 119 GAADCSFWERVLAEQCR 135


>gi|14594927|emb|CAC43324.1| putative beta 3 proteasome subunit [Nicotiana tabacum]
          Length = 178

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D ++ +    +  + +++ R+    +  G +G   D 
Sbjct: 2   SIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFRIHD-KVFIGLSGLGTDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLV 120
            TL +RL  + + Y  +  R          +   L                  D     +
Sbjct: 61  LTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
            T       E     +  G+       A  A+       EE+     +A+  + D  
Sbjct: 121 CTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMGPEELFETISQALIASVDRD 177


>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 168

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 8/147 (5%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
            +     T L +R    VVIA + + + G  VM   ARKV ++   ++ A  AG  AD  
Sbjct: 12  PLYYPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKI-SNSVGAACAGVVADMQ 70

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVIT 122
            +++ +   +  Y  +             +   L                 D     VI 
Sbjct: 71  NMIKEVTAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGPHVIV 130

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAAR 149
                   E+    +G+G   A+    
Sbjct: 131 LDPLGSMIEDDYAVVGTGAEVAVGVIE 157


>gi|302501484|ref|XP_003012734.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
 gi|302660909|ref|XP_003022128.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
 gi|291176294|gb|EFE32094.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
 gi|291186059|gb|EFE41510.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
          Length = 261

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
              Y    +  + L +  D   ++AGD +   G  +    A KV ++G        G+II
Sbjct: 29  HSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHII 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMIL 111
               G SAD   L ERL+  ++ Y     +     A   R+   L         + A++ 
Sbjct: 89  LCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILA 148

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
             D+     + +             A GS  S  +      ++ 
Sbjct: 149 GVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNF 192


>gi|115753315|ref|XP_001182748.1| PREDICTED: similar to 20S proteasome beta 6 subunit
           [Strongylocentrotus purpuratus]
 gi|115927683|ref|XP_001187732.1| PREDICTED: similar to 20S proteasome beta 6 subunit
           [Strongylocentrotus purpuratus]
          Length = 165

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 46/183 (25%), Gaps = 49/183 (26%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  TI+ +  D   +IA D ++S G ++   ++ K  RL  G          
Sbjct: 20  QRFNPYTFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYRLLLGKGCVYSFDPV 79

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
                     E++  +           L  +    K         +  DK          
Sbjct: 80  G-------SYERETYRAAGSSSALLQPLLDNQIGGKNQEGWVKEPIPVDK---------- 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
                                           A  + +     AA+  +YT   IVL  L
Sbjct: 123 --------------------------------AVALVKDVFISAAERDIYTGDGIVLHVL 150

Query: 186 KVG 188
              
Sbjct: 151 TKD 153


>gi|326472775|gb|EGD96784.1| hypothetical protein TESG_04214 [Trichophyton tonsurans CBS 112818]
 gi|326484951|gb|EGE08961.1| proteasome component C5 [Trichophyton equinum CBS 127.97]
          Length = 261

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
              Y    +  + L +  D   ++AGD +   G  +    A KV ++G        G+II
Sbjct: 29  HSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHII 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMIL 111
               G SAD   L ERL+  ++ Y     +     A   R+   L         + A++ 
Sbjct: 89  LCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILA 148

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
             D+     + +             A GS  S  +      ++ 
Sbjct: 149 GVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNF 192


>gi|296805598|ref|XP_002843623.1| proteasome component PRE3 [Arthroderma otae CBS 113480]
 gi|238844925|gb|EEQ34587.1| proteasome component PRE3 [Arthroderma otae CBS 113480]
          Length = 237

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 54/180 (30%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + ++  
Sbjct: 38  MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVKYH 96

Query: 79  LEQY-----PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITGMGDVLEPE 131
           L  Y          +++  L ++   D        +I+          V +        +
Sbjct: 97  LGMYGVVYDKQPTTQTAAALFQELCYDNKDALSAGIIIAGYDERHGGQVYSIPLGGSLHK 156

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A            E  + ++  A      +   I +  L   
Sbjct: 157 QPYAIGGSGSTYIYGYCDAHWREGMDEAEGVEFVKNSLREAIKWDGSSGGVIRMVVLTKQ 216


>gi|226287754|gb|EEH43267.1| proteasome component PRE3 [Paracoccidioides brasiliensis Pb18]
          Length = 232

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 49/180 (27%), Gaps = 11/180 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 35  MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVHYH 93

Query: 79  LEQYPNQLLRSSVELAKDWRM-------DKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           L  Y                           LR    +     +    V +        +
Sbjct: 94  LGMYGIVNKEPPTTQTAAALFQELCYDNKDMLRAGIIIAGYDQRHGGQVYSIPLGGSLHK 153

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKVG 188
                 GSG +Y      A      + E   E  + ++  A      +   I +  L   
Sbjct: 154 QSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQEAIKWDGSSGGVIRMVVLTAK 213


>gi|315046746|ref|XP_003172748.1| hypothetical protein MGYG_05335 [Arthroderma gypseum CBS 118893]
 gi|311343134|gb|EFR02337.1| hypothetical protein MGYG_05335 [Arthroderma gypseum CBS 118893]
          Length = 228

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 54/178 (30%), Gaps = 11/178 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + ++  
Sbjct: 28  MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVKYH 86

Query: 79  LEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTITL--VITGMGDVLEPE 131
           L  Y     R     ++  L ++   D        +I+          V +        +
Sbjct: 87  LGMYGVVYGRQPTTQTAAALFQELCYDNKDALSAGIIIAGYDERHGGQVYSIPLGGSLHK 146

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICVYTNHNIVLETLK 186
                 GSG +Y      A            E  + ++  A      +   I +  L 
Sbjct: 147 QPYAIGGSGSTYIYGYCDAHWRENMDEAEGVEFVKNSLREAIKWDGSSGGVIRMVVLT 204


>gi|295672926|ref|XP_002797009.1| proteasome component PRE4 [Paracoccidioides brasiliensis Pb01]
 gi|226282381|gb|EEH37947.1| proteasome component PRE4 [Paracoccidioides brasiliensis Pb01]
          Length = 260

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 17/177 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T+++ V+ +G V IA D   S G      + +++R      ++ GF G  
Sbjct: 32  HTQSPI-VTGTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRSFHNNAVL-GFGGDV 89

Query: 66  ADAFTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------- 114
           +D   +   L    +++  +    +         + K  Y R  +   L  +        
Sbjct: 90  SDMQFIDRLLTSLDIDENYSTYGHTLNAQNLHTYLSKLMYRRRSQFNPLWNNILVAGFDT 149

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAMS 167
                + +            +A G G   A+   R L       E+I    A KA+ 
Sbjct: 150 NGQPFLSSVDLLGSTYSAPSLATGFGAHLAIPVLRRLFPEDRPLEQITEEEAVKALK 206


>gi|219123961|ref|XP_002182283.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406244|gb|EEC46184.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 199

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 61/195 (31%), Gaps = 15/195 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            H  +    TTI  V      V+  D + +  + V      K+ +L       G   S+ 
Sbjct: 1   MHQRLLKTGTTIAGVCGADFCVLGADTRATNDRLVADKACAKIHKLAANVYACGAGTSAD 60

Query: 67  DAFTLLERLEKKLEQYPNQL--LRSSVELAKDWRMDKYLR----NLEAMILIAD--KTIT 118
                 +     L Q         ++            L     + +A +++    K+  
Sbjct: 61  LEHVTRQVYYTTLLQSRQDEAIGNAASVDGALASSSNILYDQGGSCQATLIVGGVYKSKA 120

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI--C 173
           ++        +      A+GSGG  A+    +      +   A E+  +A++  A I   
Sbjct: 121 MLRAIHPHGSQDALAFTALGSGGMAAMGVLESSYRHDLTLEEAIELVTRAIT--AGIVND 178

Query: 174 VYTNHNIVLETLKVG 188
           + +   + L  +   
Sbjct: 179 LGSGSQVDLCIITAE 193


>gi|212543353|ref|XP_002151831.1| proteasome component Pre4, putative [Penicillium marneffei ATCC
           18224]
 gi|210066738|gb|EEA20831.1| proteasome component Pre4, putative [Penicillium marneffei ATCC
           18224]
          Length = 260

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 25/200 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V +A D   S G      +  ++R     + I GF G  +D   +   
Sbjct: 40  GTSVVAVKFNGGVAMATDNLASYGSLARFTDVNRIRTFDD-SAIVGFGGDVSDMQYIDRL 98

Query: 75  LEK-KLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           L   ++ +  +    +         + K  Y R  E   L                + + 
Sbjct: 99  LGSIQIRENYSATGSTLNAKNLHTYLSKVFYKRRSEMNPLWNHILVAGFDSDGKPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAM---------SIAA 170
                      +A G G   A+   R L   +   E I    A KA+           A 
Sbjct: 159 DLLGTTYSGPHLATGFGAHLAVPILRRLFPEEIPIENISKEQAIKALRDCMKVLFYRDAR 218

Query: 171 DICVYTNHNIVLETLKVGDE 190
            +  YT   I  + +++ D+
Sbjct: 219 SMDQYTLAVITQDGVEIKDK 238


>gi|28273089|dbj|BAC56920.1| proteosome A [Theileria orientalis]
          Length = 267

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 74/201 (36%), Gaps = 48/201 (23%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ ++ +  V++A D + S GQ V+   ARK+ R+   ++    +GS+AD+ TL   
Sbjct: 41  GTTIIAMKFNDGVLLAADSRTSSGQLVVNRVARKITRILP-SVFMLRSGSAADSQTLSTI 99

Query: 75  LEKKLEQYPNQLLR-------------------------------------------SSV 91
           L    +    QL R                                            + 
Sbjct: 100 LRYHAQSLRQQLRRGGRGHAGSNLSMDVDTNDSLDNVTHTYKLDDTVQGPPIKALATVTH 159

Query: 92  ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARAL 151
            L   +R   Y   +       +      IT  G ++E E+  +A GSG  + ++  ++ 
Sbjct: 160 NLVHQYRNALYCGVILGGYDFVNGPEIYNITLGGTLVEIED-FLATGSGSGFIVAYLQSN 218

Query: 152 MSTQNSAEE---IARKAMSIA 169
                + +E   + +KA+  A
Sbjct: 219 YKKNMNRDECLSLLKKAIEYA 239


>gi|39945280|ref|XP_362177.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145011320|gb|EDJ95976.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 265

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 62/221 (28%), Gaps = 38/221 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
                   +  + L +  D   ++AGD +++ G ++      KV ++G          ++
Sbjct: 33  HGFNPYTDNGGSTLAIAGDDFAIMAGDTRMASGYSINTRFYPKVFKIGGTTADNSDATLV 92

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------ 112
               G +AD   L ERL+   + Y  +  +     A   R+   L               
Sbjct: 93  LSVVGFAADGEALKERLDAICKIYRYRHGKPMTVKACAKRLSTILYQKRFFPYYTHAILA 152

Query: 113 -ADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQN-- 156
             D+     V +             A G+  S  +      ++                 
Sbjct: 153 GIDEEGHGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYVPGSGTGHDLQE 212

Query: 157 ---------SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                    + E + + A   A +  +     + +  +   
Sbjct: 213 RERKPLPRETVETLVKDAFDGAVERHIEVGDGLQMMIITKD 253


>gi|328865242|gb|EGG13628.1| proteasome subunit beta type 4 [Dictyostelium fasciculatum]
          Length = 289

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 14/167 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++ +G VV+  D  +S G      N  ++++ GK  II G  G  +D   L + 
Sbjct: 52  GTSVIAIKYNGGVVMGADTLLSYGSLARFNNIERMKKFGKSTII-GAGGEYSDFQNLSQV 110

Query: 75  LEKKL----------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           L+  +               ++      +  + R          +++  D   + +    
Sbjct: 111 LDDLVVDDGCTDDGTTLSTTEIWNYIARVMYNRRNKGDPYWNSLVVIGHDNNKSFLGKVD 170

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
                 ++  +A G G   AL   R       +   A+ + +  + +
Sbjct: 171 LVGTCYQDNFIASGYGSHIALPLLRKAYKEDMTLDEAKTLIQDCLRV 217


>gi|302411392|ref|XP_003003529.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
 gi|261357434|gb|EEY19862.1| proteasome component PUP3 [Verticillium albo-atrum VaMs.102]
          Length = 191

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 51/181 (28%), Gaps = 15/181 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  K+ + G   +  G  G + D  T+ +    K  
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD--VFLGLTGLATDVTTVGDLFRYKSN 58

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R+                 R   Y  +     L        +        ++ 
Sbjct: 59  MYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDF 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+          +L       +E+     +++  A D    +     +  ++ 
Sbjct: 119 AKDFIVSGTASEQLFGMCESLWEPDLGPDELFETISQSLLNAVDRDALSGWGAHVYIIEK 178

Query: 188 G 188
            
Sbjct: 179 D 179


>gi|119185118|ref|XP_001243375.1| hypothetical protein CIMG_07271 [Coccidioides immitis RS]
          Length = 261

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 59/208 (28%), Gaps = 22/208 (10%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M         + +  T+++ V+ DG V IA D   S G      + +++R     +++ G
Sbjct: 27  MGPQTHTQSPI-VTGTSVVAVKFDGGVAIAADNLASYGSLARFQDVKRLRVFDNSSVV-G 84

Query: 61  FAGSSADAFTLLERLEK--KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI-------- 110
           F G  +D   +   L      E Y +    +         + K L    +          
Sbjct: 85  FGGDVSDMQYIDRLLNSLDIRENYSSYGQHTLNAKNLHTYLSKMLYRRRSEFNPLWNHIL 144

Query: 111 --LIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA------ 162
                      + +            +A G G   A+   R L       E I       
Sbjct: 145 VAGFDQDGKPFLSSADLLGTTFSAPSLATGFGAHLAIPILRRLFPEGTPIESITKEQAVS 204

Query: 163 --RKAMSIAADICVYTNHNIVLETLKVG 188
             ++ M +       +     +  +   
Sbjct: 205 ALKECMKVLYYRDARSLDRYSIAVITKD 232


>gi|154278908|ref|XP_001540267.1| proteasome component Pre4 [Ajellomyces capsulatus NAm1]
 gi|150412210|gb|EDN07597.1| proteasome component Pre4 [Ajellomyces capsulatus NAm1]
          Length = 260

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 62/199 (31%), Gaps = 20/199 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            + K+  T+++ V+ +G V IA D   S G      + +++R      ++ GF G  +D 
Sbjct: 34  QSPKVTGTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRSFDNSTVL-GFGGDVSDM 92

Query: 69  FTLLERLE-KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTI 117
             +   L    +E+  +    S         + K +    +                +  
Sbjct: 93  QYIDRVLNFLSIEENYSTYGHSLNAQNLHTYLSKMMYRRRSEFNPLWNVILVAGFDSEEK 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI--------ARKAMSIA 169
             + +            +A G G   A+   R L   +   E +         ++ M + 
Sbjct: 153 PFLSSVDLLGNTYSAPHLATGFGAHLAIPVLRRLFPEEVPLENVQEEQAVRSLKECMKVL 212

Query: 170 ADICVYTNHNIVLETLKVG 188
                 +     +  +K  
Sbjct: 213 FYRDARSTDRYSIAVVKKD 231


>gi|94310143|ref|YP_583353.1| 20S proteasome, A and B subunits [Cupriavidus metallidurans CH34]
 gi|93353995|gb|ABF08084.1| Putative 20S proteasome, A and B subunits [Cupriavidus
           metallidurans CH34]
          Length = 198

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 64/186 (34%), Gaps = 27/186 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + VRK   V I  D  V+ G T +      N + +        +AG         +L
Sbjct: 2   TTCVVVRKGDEVAIGADALVTFGDTRLSRAYERNQKVIPVGDSFVGLAGTTAHFPVMRSL 61

Query: 72  LERLEKKLEQYPNQLLRSSVEL------------AKDWRMDKYLRNLEAMILIADKTITL 119
           L  + ++   +    +  +                K+   D Y  +    ++     I  
Sbjct: 62  LTGMGEECRLHTRDDVFRTFLKVHEKLKNEYFINTKEDEDDPYESSQIVCLIANSGGIFG 121

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMS--------IAA 170
           V +     +   +    IGSG +YAL A  A+   T   A  IAR  +          AA
Sbjct: 122 VYS--YREVFSFDRFWGIGSGRNYALGAMHAVYDRTDLDAGAIARIGVEAGIEFDKSSAA 179

Query: 171 DICVYT 176
            I V+T
Sbjct: 180 PIDVHT 185


>gi|169806330|ref|XP_001827910.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
           bieneusi H348]
 gi|161779358|gb|EDQ31381.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
           bieneusi H348]
          Length = 276

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 13/193 (6%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-IIAGFAGSS 65
           +    + +  T LT++    ++IA D +++    +    + K+ ++        GF   S
Sbjct: 70  EEDLYEDNGGTTLTIKLQNKLIIAADTRLNAQYNIYTRYSTKIHKIKDYFLTTVGFHADS 129

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITG 123
                 L+   K+ EQY    L +  E       +     L +   +         + + 
Sbjct: 130 HKIALTLDYQLKQYEQYDKMTLSALAEFLHHVLYNNRFFPLYSYCCLCGFENGEATIYSY 189

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN----------SAEEIARKAMSIAADIC 173
                  +      GSG +       + +S +N           A  + +KA   AA+  
Sbjct: 190 DCIGSYQKTECRVNGSGTAMIQPLFDSWISGKNFENYSQISFEDALCLVKKAFHSAAEAD 249

Query: 174 VYTNHNIVLETLK 186
           V T   + +  L 
Sbjct: 250 VKTGDYLEIYILD 262


>gi|281209309|gb|EFA83482.1| p21-activated protein kinase [Polysphondylium pallidum PN500]
          Length = 1404

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 16/167 (9%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             ++ +   ++ +     V IA D +  +  T +  N  KV R+     I G +G   DA
Sbjct: 2   SIMEYNGGAVIVMTGKDCVAIATDLRFGIQHTTVSTNNPKVYRISDKCFI-GISGLVTDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVI 121
            TL ++L  +   Y  +  R          +   L                 D      I
Sbjct: 61  QTLYQKLVFRHNLYKLKEERDMSPQVLTNLVSNMLYEKRFGPYFTEPVICGLDSNNKPFI 120

Query: 122 TGMGDVLEP--ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
           +GM  +  P   +  + +G+           L           R AM
Sbjct: 121 SGMDLIGAPVQTDDFLLVGTMTPAMYGLCETLYKKDM------RDAM 161


>gi|145341544|ref|XP_001415866.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576089|gb|ABO94158.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 246

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 59/174 (33%), Gaps = 16/174 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+     G VV+  D +VS G  V    + K+  L    I+   +GS+AD   L   
Sbjct: 17  GTTIVACEYAGGVVLGADSRVSTGIYVSNRASDKMCALNDRTIMC-RSGSAADTEALAGY 75

Query: 75  LEKKLEQYPNQLLRSSVELAKD---------WRMDKYLRNLEAMILIADKTI---TLVIT 122
           +   + Q+  +L   +                +     R L A  ++        + V  
Sbjct: 76  VRNIVSQHEMELDEIADVKTVATIANQIGYQNKGANRGRGLSAYTIVGGWDKRRGSQVYA 135

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
                   +      GSG +Y      +      + EE      KA+++A  + 
Sbjct: 136 CTAGGNMIKERWTTDGSGSTYIWGFLDSGWREGMTREECEAFVAKAIALAMSVD 189


>gi|261201474|ref|XP_002627137.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
 gi|239592196|gb|EEQ74777.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
 gi|239611645|gb|EEQ88632.1| proteasome component Pup3 [Ajellomyces dermatitidis ER-3]
 gi|327348342|gb|EGE77199.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
          Length = 192

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 48/181 (26%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  K+        + G  G + D  T+ + L  K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYL-GLTGLATDVSTVSDVLRFKVN 59

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG----------DVLEP 130
            Y  +  R              L             +  +    G            ++ 
Sbjct: 60  MYRLREERHISPKTLANLTSSTLYEKRFGPYFVSPVLAGIDNTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       +++     +A+  A D    +     +  ++ 
Sbjct: 120 AQDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|289614851|emb|CBI58388.1| unnamed protein product [Sordaria macrospora]
          Length = 191

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 53/181 (29%), Gaps = 15/181 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  K+ + G   +  G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD--VFLGLTGLATDVSTVSDLFRYKVN 58

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R+                 R   Y  +     L    +   +        ++ 
Sbjct: 59  MYRLREERNIAPKTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSEPFICGFDSIGCIDF 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+          +L       E++     +A+  A D    +     +  ++ 
Sbjct: 119 AKDFIVSGTATEQLFGMCESLWEPNLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEK 178

Query: 188 G 188
            
Sbjct: 179 D 179


>gi|302922263|ref|XP_003053429.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734370|gb|EEU47716.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 261

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 63/207 (30%), Gaps = 32/207 (15%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +    + +  T+++ V+    VV+A D   S G      + +++R     +++ GF+G  
Sbjct: 32  NTQQPI-VTGTSVIAVKFKDGVVMAADNLASYGSLARFTDVKRLRSFADSSVV-GFSGDI 89

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA-------- 113
           +D   L   L +           +    A +         Y R  +   L          
Sbjct: 90  SDMQYLDRHLIELSLDEAYTSPDAPRLNAANLHRYLAKLLYRRRSKFDPLWNHLLVAGLD 149

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA-------RALMSTQNS-AEEIARKA 165
           D     +           +  +A G G   A            A  +     A +I ++ 
Sbjct: 150 DDDKPFLAAADLLGSTYSSPSLATGFGAMLAQPIMRRHVPDEEAAQNLDKDGAVDIIKEC 209

Query: 166 MSI-----AADICVY-----TNHNIVL 182
           M +     A  +  Y     T   + +
Sbjct: 210 MKVLFYRDARSLDSYSLAIVTKDGVEI 236


>gi|297522054|ref|ZP_06940440.1| ATP-dependent protease peptidase subunit [Escherichia coli OP50]
          Length = 69

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 1/65 (1%)

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNI 180
           TG GDV++PEN ++AIGSGG YA +AARAL+ +T+ SA EIA KA+ IA DIC+YTNH  
Sbjct: 1   TGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFH 60

Query: 181 VLETL 185
            +E L
Sbjct: 61  TIEEL 65


>gi|308502323|ref|XP_003113346.1| CRE-PBS-6 protein [Caenorhabditis remanei]
 gi|308265647|gb|EFP09600.1| CRE-PBS-6 protein [Caenorhabditis remanei]
          Length = 258

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 57/202 (28%), Gaps = 23/202 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSAD 67
               M   +   +  +   ++A D +++     ++  +A K+  L    I+   +G   D
Sbjct: 45  NPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTT-SGFYGD 103

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------- 120
              L + L+ +L +Y                + + L             +  +       
Sbjct: 104 VLQLKKVLQSRLHKYRFDYRADMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGA 163

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNS---AEEIARKAM 166
             +             A G+     +      +            Q +   A  + + + 
Sbjct: 164 VFSYDPIGCIERLTYSASGAAEPMIIPFLDCQIGHVTLAEGYERPQLTLERAISLMKDSF 223

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             AA+  + T   I L   + G
Sbjct: 224 RGAAEREISTGDKIHLVIAETG 245


>gi|260946487|ref|XP_002617541.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
 gi|238849395|gb|EEQ38859.1| proteasome component PUP3 [Clavispora lusitaniae ATCC 42720]
          Length = 192

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 24/193 (12%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     + IA D ++      +  N  K+ + G    + G  G + D  TL E    K  
Sbjct: 1   MVGKECIAIACDLRLGNQSLGVANNFEKIFQFGDKTFL-GLTGLATDVLTLKEDFRLKHN 59

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R                  R   Y        L +      +        ++ 
Sbjct: 60  LYKLREEREIEPRTLANLVSSSLYEKRFGPYFVGPIVAGLESKTNKPFICGFDLIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--------VY--TN 177
               +  G+          +L       E++     +A+  A D          VY  T 
Sbjct: 120 AKDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQALLNAVDRDALSGWGAVVYIVTK 179

Query: 178 HNIVLETLKVGDE 190
             +V   LK   +
Sbjct: 180 DKVVKRVLKTRQD 192


>gi|302688009|ref|XP_003033684.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
 gi|300107379|gb|EFI98781.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
          Length = 274

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 68/237 (28%), Gaps = 49/237 (20%)

Query: 1   MVVMGD----KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN 56
           MV +G            +  T+L +      VIAGD + S G  +    A KV RL    
Sbjct: 4   MVTLGHPTQHSFNPYTDNGGTVLAIAGSDFSVIAGDTRQSEGYNIQTRYAPKVHRLTNKA 63

Query: 57  IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT 116
           ++A   G +AD  T +++L+++LE Y +   ++    A    +   L             
Sbjct: 64  VLA-VTGFAADGNTFVKKLKQRLEWYHHAHAKNMPLQAVARLIQTMLYGRRFFPFYVYII 122

Query: 117 ITLV----------------------------ITGMGDVLEPENGVMAIGSGGSYALSAA 148
           +  +                             +             A G+  S      
Sbjct: 123 LGGIEEDGTRHRSSRSHTHRPTFFLFPGSGSVYSFDPVGSYERETCRAAGAAQSLLQPFL 182

Query: 149 RALMSTQNSAEE----------------IARKAMSIAADICVYTNHNIVLETLKVGD 189
              +  +N   +                +   + + A +  +     + +  +   D
Sbjct: 183 DNQIYFKNQIPQPGTTHPAHLPLPHVLSLVIDSFTSATERHIEVGDGLEVYIVVAKD 239


>gi|212537589|ref|XP_002148950.1| proteasome component Pup3, putative [Penicillium marneffei ATCC
           18224]
 gi|210068692|gb|EEA22783.1| proteasome component Pup3, putative [Penicillium marneffei ATCC
           18224]
          Length = 171

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 39/160 (24%), Gaps = 11/160 (6%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                 ++    + +     V IA D ++ +    +  N  K+        + G  G + 
Sbjct: 1   MSSPFDINGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYL-GITGLAT 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI 117
           D  T+ +    K+  Y  +  R                  R   Y  +     +      
Sbjct: 60  DVTTVSDLFRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGK 119

Query: 118 TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQN 156
             +        ++     +  G+           L     
Sbjct: 120 PFICGFDSIGCIDFAKDFIVSGTASDQLFGTCEGLWEPDL 159


>gi|46108708|ref|XP_381412.1| hypothetical protein FG01236.1 [Gibberella zeae PH-1]
          Length = 191

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 49/181 (27%), Gaps = 15/181 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  +  K+ + G   +  G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNDFPKIFQYGD--VFLGLTGLATDVNTVSDLFRYKVN 58

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R                  R   Y  +     L        +        ++ 
Sbjct: 59  MYRLREERDIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDF 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       + +     +++  A D    +     +  ++ 
Sbjct: 119 AKDFIVSGTASEQLFGMCEGLWEPDLEPDALFETISQSLLNAVDRDALSGWGAHVYIIEK 178

Query: 188 G 188
            
Sbjct: 179 D 179


>gi|307169438|gb|EFN62137.1| Proteasome subunit beta type-4 [Camponotus floridanus]
          Length = 251

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 49/168 (29%), Gaps = 12/168 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               +    T+++ ++    V+IA D   S G      N  ++ ++    I+      + 
Sbjct: 37  SQSPI-TTGTSVIGIKFKDGVIIAADVLGSYGSLARYRNLERIMKVNDNTILGASGDYAD 95

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------KTI 117
                     K LE+       S    A    + +  Y R         +          
Sbjct: 96  FQCIKSYVERKILEEKCLDDGFSLKPKALHCWLTRVMYNRRSNFDPFWNNFVIAGLEDEK 155

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIAR 163
             + T         + V+A G G   A    R     +++ S EE   
Sbjct: 156 PFLATVDKLGTAYSDPVIATGYGAYMATPVLRKAYEENSEMSKEEAIE 203


>gi|85089532|ref|XP_957993.1| hypothetical protein NCU07365 [Neurospora crassa OR74A]
 gi|28919293|gb|EAA28757.1| hypothetical protein NCU07365 [Neurospora crassa OR74A]
          Length = 268

 Score = 75.4 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 72/208 (34%), Gaps = 33/208 (15%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+A D   S G      + +++R     +++ GF+G  +D   L   
Sbjct: 40  GTSVIAMKYKDGVVMAADNLASYGSLARFPDVKRLRVFLDSSVV-GFSGDVSDMQFLDRH 98

Query: 75  LE--KKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DK 115
           L      E Y           +   ++  L K  +   Y R  +   L            
Sbjct: 99  LTDLSIDEAYEDPSCTAAPNGKGHLNAANLHKYLQKLLYKRRNDFDPLWNQLLIAGFDGH 158

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEIARKAMS 167
           +   + +         +  +A G G + A    R    T+          A E+ ++ M 
Sbjct: 159 SKPYLASVDLRGTSFTSPSLATGFGSALAQPIMRRYAETEEDAAKLTREQAVEVIKECMK 218

Query: 168 I-----AADICVYTNHNIVLETLKVGDE 190
           +     A  +  Y+   +  + +++ ++
Sbjct: 219 VLYYRDARSLDRYSIAVVTKDGVELKED 246


>gi|296805321|ref|XP_002843485.1| proteasome component C5 [Arthroderma otae CBS 113480]
 gi|238844787|gb|EEQ34449.1| proteasome component C5 [Arthroderma otae CBS 113480]
          Length = 261

 Score = 75.4 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-------KGNII 58
              Y    +  + L +  D   ++AGD +   G  +    A KV ++G        G++I
Sbjct: 29  HSFYPYTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHMI 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMIL 111
               G SAD   L ERL+  ++ Y     +     A   R+   L         + A++ 
Sbjct: 89  LCVVGFSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILA 148

Query: 112 IADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
             D+     + +             A GS  S  +      ++ 
Sbjct: 149 GVDEEGKGALYSYDPVGSYEREFCRAAGSAASLMMPFLDNQVNF 192


>gi|46108636|ref|XP_381376.1| hypothetical protein FG01200.1 [Gibberella zeae PH-1]
          Length = 261

 Score = 75.4 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 27/209 (12%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +    + +  T+++ V+    VVIA D   S G      + +++R     +++ GF+G  
Sbjct: 32  NTQQPI-VTGTSVIAVKFKDGVVIAADNLASYGSLARFTDVKRLRPFADSSVV-GFSGDI 89

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA-------- 113
           +D   L   L +           +    A +         Y R  +   L          
Sbjct: 90  SDMQYLDRHLIELSLDEAYTSPDAPRLNAANLHRYLAKLLYRRRSKFDPLWNHILVVGLD 149

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA-----RALMSTQNS---AEEIARKA 165
           D     +              +A G G   A             S       A  I ++ 
Sbjct: 150 DDDKPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRRHVPDEEASQNLDKEGAINIIKEC 209

Query: 166 MSI-----AADICVYTNHNIVLETLKVGD 189
           M +     A  +  Y+   +  E +++ +
Sbjct: 210 MKVLYYRDARSLDSYSMAVVTKEGVEINE 238


>gi|168037918|ref|XP_001771449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677176|gb|EDQ63649.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 204

 Score = 75.4 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 65/201 (32%), Gaps = 23/201 (11%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             + + ++ +       IA D ++ +    +  + +++ ++     I G +G + D  T+
Sbjct: 5   SYNGSALIAMVGKDCFAIASDRRLGVNFQTIACDFQRIFKIHDHLYI-GLSGLATDVQTM 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLVITG 123
            +RL  + + Y  +  R+         +   L                  D     + T 
Sbjct: 64  HQRLNFRHKLYQLREERNMRPETFASLVSAMLYEKRFGPYFCEPIIAGLNDDGTPFICTT 123

Query: 124 MG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC------ 173
                 +     +  G+       A  ++       +E+     +A+  + D        
Sbjct: 124 DLIGAKQLAKDFVVSGTASESLYGACESMYKPDLGPDELFEVISQALLASVDRDCISGWG 183

Query: 174 ----VYTNHNIVLETLKVGDE 190
               V T + ++ +TLK   +
Sbjct: 184 GIVHVVTPNQVITKTLKGRMD 204


>gi|67526071|ref|XP_661097.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
 gi|40739864|gb|EAA59054.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
 gi|259481995|tpe|CBF76042.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 215

 Score = 75.4 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 66/198 (33%), Gaps = 16/198 (8%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG---KGNIIAGFAG 63
           + Y    +    L V      ++AGD + + G  +      KV  +      +I+    G
Sbjct: 6   RFYPYTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDARDRSIVISVIG 65

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIADKT 116
            +AD   L ERL+  +  Y  Q  ++    A   R+   L         L+ M+   D  
Sbjct: 66  FAADGRALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDAD 125

Query: 117 ITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAA 170
               +          +    A G   S  L    +        +  +A+++ R A + A 
Sbjct: 126 GQGAIYYYDPAGCIEKRSHCAAGEASSLMLPFLDSQAPRLQPLSLQTAQQLVRDAYTGAT 185

Query: 171 DICVYTNHNIVLETLKVG 188
           +  +    ++ +  +   
Sbjct: 186 ERHIEVGDHLQMLVVTRE 203


>gi|299748959|ref|XP_001840270.2| proteasome beta 4 subunit [Coprinopsis cinerea okayama7#130]
 gi|298408215|gb|EAU81717.2| proteasome beta 4 subunit [Coprinopsis cinerea okayama7#130]
          Length = 252

 Score = 75.4 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 65/190 (34%), Gaps = 17/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L ++    +++A D   S G      +  +++ +G   ++ G +G  +D   L + 
Sbjct: 36  GTSVLAIKYKDGIMMAADNLASYGSLARFKDVPRLQAVGTHTVV-GASGDMSDFQYLQKV 94

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVITGM 124
           L E  +E++ N    S         + + +    + +            DK    +    
Sbjct: 95  LDELIVEEFTNADGHSLGAKEIHEYLSQVMYARRSKMDPLWNSLLVGGVDKGERFLAYVD 154

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADICVYTNH 178
                     +A G G   A    R  +       T++ A +I  K+M +       +  
Sbjct: 155 LLGTTYSASTLATGYGAYLAQPLLRKEVEGREDTLTEDEARKILEKSMKVLFYRDARSLD 214

Query: 179 NIVLETLKVG 188
              + T+   
Sbjct: 215 KYQIATITAD 224


>gi|171684677|ref|XP_001907280.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942299|emb|CAP67951.1| unnamed protein product [Podospora anserina S mat+]
          Length = 275

 Score = 75.4 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 70/215 (32%), Gaps = 40/215 (18%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+A D   S G      + +++R      +I GF G  +D   L   
Sbjct: 40  GTSVIAIKYKDGVVMAADNLASYGSLARFTDVKRLRTFLDTTVI-GFGGDVSDMQFLDRH 98

Query: 75  LEKKLEQYPNQLLRS------------------SVELAKDWRMDKYLRNLEAMILIA--- 113
           L++       ++  +                  +  L K  +   Y R      L     
Sbjct: 99  LKELATDESYEVEPTLDDEDDEESSSSKPGHLNAANLFKYLQKLMYQRRNSFDPLWNQIL 158

Query: 114 -----DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEE 160
                  +   + +         +  +A G G + A    R    T+          A E
Sbjct: 159 VAGLDSDSKPFLASVDLRGTSFTSPSLATGFGAALAQPIMRKYAGTEEDAAKLTREQAVE 218

Query: 161 IARKAMSI-----AADICVYTNHNIVLETLKVGDE 190
           + ++ M +     A  +  Y+   +  + +++ ++
Sbjct: 219 VVKECMKVLFYRDARSLDRYSIAVVNKDGIELKED 253


>gi|325183713|emb|CCA18172.1| proteasome subunit beta putative [Albugo laibachii Nc14]
          Length = 261

 Score = 75.0 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 63/189 (33%), Gaps = 18/189 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V++A D   S G      + R++  +     + G +G  +D     ++
Sbjct: 44  GTSVIAIKYKDGVLMAADTLGSYGSLARFTDQRRMMSV-HNATLIGASGDFSDYQFFKDK 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA---------DKTITLVI 121
           L+ +LE +           A +         Y R  +   L           +     + 
Sbjct: 103 LD-ELEVFDYNQDDGCDLTAPELYHYLQRLMYQRRNKFDPLWNTLLIAGVDPNTQKPFLG 161

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
                 L  E   +A G G  +A+   R       S   A+++  + M I       T +
Sbjct: 162 QSTMIGLAFEGDYLATGFGHHFAMPILRKSWREDLSLDEAKKLLLECMRICLYRDCRTIN 221

Query: 179 NIVLETLKV 187
            I +  +  
Sbjct: 222 RIQIAKVDK 230


>gi|164427141|ref|XP_964481.2| proteasome component PUP3 [Neurospora crassa OR74A]
 gi|157071624|gb|EAA35245.2| proteasome component PUP3 [Neurospora crassa OR74A]
          Length = 191

 Score = 75.0 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 15/181 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  K+ + G   +  G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD--VFLGLTGLATDVSTVSDLFRYKVN 58

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R+                 R   Y  +     L        +        ++ 
Sbjct: 59  MYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGEPFICGFDSIGCIDF 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       E++     +A+  A D    +     +  ++ 
Sbjct: 119 AKDFIVSGTATEQLFGMCENLWEPNLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEK 178

Query: 188 G 188
            
Sbjct: 179 D 179


>gi|320586980|gb|EFW99643.1| proteasome component [Grosmannia clavigera kw1407]
          Length = 276

 Score = 75.0 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 41/202 (20%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++ +G VV+A D   S G      +  ++R     ++I GF+G  +D   L   
Sbjct: 40  GTSVVALKFNGGVVMAADNLASYGSLARFNSTLRLRSFANTSVI-GFSGDVSDMQYLDRH 98

Query: 75  L---------------EKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA-- 113
           L                ++ +    ++ RSS   A +         Y R  +   L    
Sbjct: 99  LTELAIDETYDNPAPSAEERQDDDGEIKRSSTLNAANLHKYLAKLMYQRRNKFDPLWNQL 158

Query: 114 ------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAE 159
                 D++   +              +A G G + A    R    T           A 
Sbjct: 159 LVAGLDDESKPFLACADLRGTTYSAPSLATGYGSALAQPIMRRYAETDEQTAKLTREQAV 218

Query: 160 EIARKAMSI-----AADICVYT 176
           +I R+ M +     A  +  Y+
Sbjct: 219 DIVRECMKVLYYRDARSLDTYS 240


>gi|17554384|ref|NP_498806.1| Proteasome Beta Subunit family member (pbs-6) [Caenorhabditis
           elegans]
 gi|21903455|sp|P34286|PSB1_CAEEL RecName: Full=Proteasome subunit beta type-1; AltName:
           Full=Proteasome subunit beta 6
 gi|12276021|gb|AAG50223.1|AF303265_1 proteasome component C5 [Caenorhabditis elegans]
 gi|14625122|gb|AAK71356.1|L14745_12 Proteasome beta subunit protein 6, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 258

 Score = 75.0 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 60/205 (29%), Gaps = 23/205 (11%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGS 64
            +     M   +   +  +   ++A D +++     ++  +A K++ L    I+   +G 
Sbjct: 42  QRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTT-SGF 100

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV---- 120
             D   L + L+ +L +Y                + + L             +  +    
Sbjct: 101 YGDVLQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHG 160

Query: 121 ----ITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNS---AEEIAR 163
                +          G  A G+     +      +            + +   A  + +
Sbjct: 161 KGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQIGHVTLSEGYERPELTLDRAISLMK 220

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
            +   AA+  + T   I L   + G
Sbjct: 221 DSFRGAAEREISTGDKIHLVIAEAG 245


>gi|302036324|ref|YP_003796646.1| putative proteasome subunit beta [Candidatus Nitrospira defluvii]
 gi|300604388|emb|CBK40720.1| putative Proteasome, beta subunit [Candidatus Nitrospira defluvii]
          Length = 257

 Score = 75.0 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 63/187 (33%), Gaps = 24/187 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           ATTIL ++    V++AGD + + G  VM     KV  + + +++A  AG  A A+ ++  
Sbjct: 33  ATTILALKYRDGVLVAGDRRATAGNMVMYDRTDKVLEIDRYSVMA-IAGVPATAYEMVRV 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE----- 129
           LE   + Y    L+      K   + K L+      L     +  V  G     E     
Sbjct: 92  LEHSFKYYRRTQLQELSFEGKLRAVSKLLKENVPAALAGTGAVVPVFAGYDHEQESAKIY 151

Query: 130 ---------PENGVMAIGSGGSYALSAARALMSTQ------NSAEEIARKAMS---IAAD 171
                            GSG          + +           E+   +A+     AA+
Sbjct: 152 FYDILGAEFEAVEYAVSGSGSPTIRGILHYVNTWGPQPLATLPEEQATIQALRLLSSAAE 211

Query: 172 ICVYTNH 178
               T  
Sbjct: 212 FDSATGG 218


>gi|322701542|gb|EFY93291.1| proteasome component PUP3 [Metarhizium acridum CQMa 102]
          Length = 191

 Score = 75.0 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 50/181 (27%), Gaps = 15/181 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  K+ + G   +  G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD--VFLGLTGLATDVSTVADLFRYKVN 58

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R+                 R   Y  +     L        +        ++ 
Sbjct: 59  MYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDF 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       + +     +A+  A D    +     +  ++ 
Sbjct: 119 AKDFIVSGTASEQLFGMCEGLWEEDMGPDALFETISQALLNAVDRDALSGWGAHVYIIEK 178

Query: 188 G 188
            
Sbjct: 179 N 179


>gi|322697964|gb|EFY89738.1| 20S proteasome subunit [Metarhizium acridum CQMa 102]
          Length = 261

 Score = 75.0 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 59/204 (28%), Gaps = 24/204 (11%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T+++ ++    VV+A D   S G      + +++R     +++ GF+G  
Sbjct: 32  HTQQPI-VTGTSVIAIKFKDGVVMAADNLASYGSLARFTDVKRLRPFADASVV-GFSGDI 89

Query: 66  ADAFTLLERLE--KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------- 113
           +D   L   L      E Y +              + K L    +               
Sbjct: 90  SDMQYLDRHLTDLALTEAYDSPDSARLNASNLHRYLSKLLYRRRSKFDPLWNHLLVAGLD 149

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---------NSAEEIARK 164
           DK    +              +A G G   A    R   +             A +I ++
Sbjct: 150 DKGTPFLAAADLLGTTYSAPSLATGFGAMLAQPVMR-RYAPDEESAAKLTREEAVDIIKE 208

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
            M +       +  +  L  +   
Sbjct: 209 CMKVLFYRDARSLDSYSLAIVTKD 232


>gi|328849593|gb|EGF98770.1| hypothetical protein MELLADRAFT_73512 [Melampsora larici-populina
           98AG31]
          Length = 239

 Score = 75.0 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 9/156 (5%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           + +G +      +  TIL +      VIAGD + S G ++    A KV +L     IA  
Sbjct: 1   MPVGHQFNPYTDNGGTILAISSKSFAVIAGDTRQSEGYSIQSRYAPKVTQLTDQCCIA-V 59

Query: 62  AGSSADAFTLLERLEKKL--EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----D 114
            G +ADA  L+++++++L    + +  + S   +A+  +   Y R              D
Sbjct: 60  NGFAADAKELVKQIKQRLVWYNHTHSSMPSLQSIARLIQTMLYGRRFFPYYAYVILAGID 119

Query: 115 KTITL-VITGMGDVLEPENGVMAIGSGGSYALSAAR 149
           +  T  V +             A G+  S       
Sbjct: 120 RDGTGAVYSFDPVGSYERESCRAAGAAQSLVQPFLD 155


>gi|322705678|gb|EFY97262.1| proteasome component PUP3 [Metarhizium anisopliae ARSEF 23]
          Length = 191

 Score = 75.0 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 50/181 (27%), Gaps = 15/181 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  K+ + G   +  G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGD--VFLGLTGLATDVGTVADLFRYKVN 58

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R+                 R   Y  +     L        +        ++ 
Sbjct: 59  MYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDSIGCIDF 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       + +     +A+  A D    +     +  ++ 
Sbjct: 119 AKDFIVSGTASEQLFGMCEGLWEEDMGPDALFETISQALLNAVDRDALSGWGAHVYIIEK 178

Query: 188 G 188
            
Sbjct: 179 D 179


>gi|218202454|gb|EEC84881.1| hypothetical protein OsI_32035 [Oryza sativa Indica Group]
          Length = 262

 Score = 74.6 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 62/191 (32%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++I+ ++    V++A D   S G T+   +  +++ +GK + + G +G  +D   +L  
Sbjct: 43  GSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHS-LIGASGEFSDFQEILRY 101

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-----------KTITLV 120
           L E  L  +      S         + +  Y R  +   L                   +
Sbjct: 102 LDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGVKKGPKGEEKYL 161

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E   +A G G   A+   R       +   A ++  K + +       + 
Sbjct: 162 GMVNMIGTHFEENHIATGFGNHMAIPILRTEWREDMTFEEAVKLVEKCLLVLLYRDRSSI 221

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 222 NKFQIAKITTE 232


>gi|218659908|ref|ZP_03515838.1| ATP-dependent protease peptidase subunit [Rhizobium etli IE4771]
          Length = 54

 Score = 74.6 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/53 (71%), Positives = 46/53 (86%)

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           AIGSGG++A +AARALM T  SAEEIAR+A+ IAADICVYTNHN+V+E+L V 
Sbjct: 1   AIGSGGNFAFAAARALMDTDKSAEEIARRALEIAADICVYTNHNLVVESLDVE 53


>gi|332029489|gb|EGI69390.1| Proteasome subunit beta type-7 [Acromyrmex echinatior]
          Length = 138

 Score = 74.6 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 43/135 (31%), Gaps = 7/135 (5%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I  V     V++  D + +         + K+  L       G AG++AD     E +  
Sbjct: 1   IAGVVYKDGVILGRDTRATEDTIAADKYSLKIHYLVPNMYCCG-AGTAADTEMTTEMIAS 59

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPE 131
           +LE +     R       +  + + L   +  I  A      D     +          +
Sbjct: 60  QLELHRPNTGRVVPVCTANTLIKQMLFRYQGHISAALILRGFDLDGPQLYCIYPHGSTEK 119

Query: 132 NGVMAIGSGGSYALS 146
                +GSG   A+S
Sbjct: 120 LKYTTMGSGSLAAMS 134


>gi|116181896|ref|XP_001220797.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88185873|gb|EAQ93341.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 192

 Score = 74.6 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 51/181 (28%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  KV + G+   + G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKVFQYGENVFL-GLTGLATDVSTVSDLFRYKVN 59

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R                  R   Y  +     L        +        ++ 
Sbjct: 60  MYRLREERHIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPTTGAPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+          +L       + +     +++  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTATEQLFGMCESLWEPDMGPDALFETISQSLLNAVDRDALSGWGAHVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|222641915|gb|EEE70047.1| hypothetical protein OsJ_30005 [Oryza sativa Japonica Group]
          Length = 265

 Score = 74.6 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 62/191 (32%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++I+ ++    V++A D   S G T+   +  +++ +GK + + G +G  +D   +L  
Sbjct: 46  GSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHS-LIGASGEFSDFQEILRY 104

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-----------KTITLV 120
           L E  L  +      S         + +  Y R  +   L                   +
Sbjct: 105 LDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGVKKGPKGEEKYL 164

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E   +A G G   A+   R       +   A ++  K + +       + 
Sbjct: 165 GMVNMIGTHFEENHIATGFGNHMAIPILRTEWREDMTFEEAVKLVEKCLLVLLYRDRSSI 224

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 225 NKFQIAKITTE 235


>gi|268570354|ref|XP_002648488.1| C. briggsae CBR-PBS-6 protein [Caenorhabditis briggsae]
 gi|187039838|emb|CAP21312.1| CBR-PBS-6 protein [Caenorhabditis briggsae AF16]
          Length = 258

 Score = 74.6 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 59/205 (28%), Gaps = 23/205 (11%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGS 64
            +     M   +   +  +   ++A D +++     ++  +A K+  L    I+   +G 
Sbjct: 42  QRWNPYSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTT-SGF 100

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV---- 120
             D   L + L+ +L +Y                + + L             +  +    
Sbjct: 101 YGDVIQLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHG 160

Query: 121 ----ITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNS---AEEIAR 163
                +          G  A G+     +      +            Q +   A  + +
Sbjct: 161 KGAVFSYDPIGCIERLGYSASGAAEPMIIPFLDCQIGHVTLAEGYERPQLTLERAISLMK 220

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
            +   AA+  + T   I L   + G
Sbjct: 221 DSFRGAAEREISTGDKIHLVIAEAG 245


>gi|154279074|ref|XP_001540350.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
 gi|150412293|gb|EDN07680.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
 gi|225562334|gb|EEH10613.1| proteasome component PUP3 [Ajellomyces capsulatus G186AR]
          Length = 192

 Score = 74.6 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 50/181 (27%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  K+        + G  G + D  ++ + L  K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYL-GLTGLATDVSSVSDLLRYKVN 59

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R                  R   Y  +     + +      +        ++ 
Sbjct: 60  MYRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       +++     +A+  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|225554387|gb|EEH02686.1| 20S proteasome subunit [Ajellomyces capsulatus G186AR]
          Length = 260

 Score = 74.6 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 16/168 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G      + +++R      +I GF G  +D   +   
Sbjct: 40  GTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRSFDNSTVI-GFGGDVSDMQYIDRV 98

Query: 75  LE-KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITG 123
           L    +E+  +    S         + K +    +                +    + + 
Sbjct: 99  LNFLSIEENYSTYGHSLNAQNLHTYLSKMMYRRRSEFNPLWNVILVAGFDGEEKPFLSSV 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAMS 167
                      +A G G   A+   R L   +   E +    A +A+ 
Sbjct: 159 DLLGNTYSAPHLATGFGAHLAIPVLRRLFPEEVPLENVKEEQAVRALQ 206


>gi|296413676|ref|XP_002836535.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630362|emb|CAZ80726.1| unnamed protein product [Tuber melanosporum]
          Length = 257

 Score = 74.3 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 42/133 (31%), Gaps = 2/133 (1%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRR--LGKGNIIAGFAG 63
                   +  TI+ +  +  VV+AGD + + G  +     +KV R       ++A    
Sbjct: 31  HSFNPYTDNGGTIIGITGEDFVVLAGDTRHTSGYNINSRTEKKVYRLGEDNSLVLATVGF 90

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
            +         +    +   N  L++    A    +  +L         A+  +  +   
Sbjct: 91  GADSKDVAETMMRAVNDFKFNHNLKNMSVSAAAQYLSTFLYGNRFFPKYANCVLAGLDKD 150

Query: 124 MGDVLEPENGVMA 136
               L   + V +
Sbjct: 151 GRARLYSYDSVGS 163


>gi|223936033|ref|ZP_03627947.1| 20S proteasome A and B subunits [bacterium Ellin514]
 gi|223895255|gb|EEF61702.1| 20S proteasome A and B subunits [bacterium Ellin514]
          Length = 256

 Score = 74.3 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 26/194 (13%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
             +  ATT+        V++AGD + + G  ++     KV  +   +++A  AG  A AF
Sbjct: 32  PTQTQATTVFAFHFAEGVMMAGDRRATAGNVIVTDKVDKVIEIDAASLLA-IAGVPATAF 90

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT------------- 116
            +   L+   E Y    L+     AK   + + LR    M +                  
Sbjct: 91  EMARVLQISFEYYRRSQLQPLSLQAKVRALARLLRENLPMTMQGVGVVVPLFATLDQSAT 150

Query: 117 --ITLVITGMG-DVLEPENGVMAIGSGGS---YALSAARALMST---QNSAEEIARKAMS 167
                +               +A GSG       +S      +    Q + +E  R A+ 
Sbjct: 151 PAKPQIYFYDPLGAQFQATDHVASGSGSGTIRSIMSFQEQYGNPKPSQMNLKEAVRFALR 210

Query: 168 ---IAADICVYTNH 178
              +A++    T  
Sbjct: 211 LLMVASEFDSATGG 224


>gi|224827139|ref|ZP_03700235.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
 gi|224600648|gb|EEG06835.1| 20S proteasome A and B subunits [Lutiella nitroferrum 2002]
          Length = 195

 Score = 74.3 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 70/188 (37%), Gaps = 17/188 (9%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ-------TVMKANARKVRRLGKGNIIAGFAGSSADA 68
           TTI+ V+K   + IA D Q + G             N +  R+      IAG A      
Sbjct: 2   TTIVVVKKGSQIAIAADSQTTFGDDQKLLAGYDPHHN-KIFRQGDSYLAIAGSAAHDLVL 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE--------AMILIADKTITLV 120
            ++L+ +  K       L  +  +L    +   YLR  E        + +++    +  +
Sbjct: 61  QSVLKGVHNKDFSSRQGLFDTFRKLHPKLKEQFYLRPEEEEDDPYESSQMMVVVANVHGI 120

Query: 121 ITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHN 179
                   +   +   AIGSG  +A+ A         SAEEIAR  +    +  V ++  
Sbjct: 121 FGVYPMREVYEFSRFWAIGSGRKFAMGAMYVAYEQDLSAEEIARIGIQAGCEFDVSSSLP 180

Query: 180 IVLETLKV 187
           + L T+  
Sbjct: 181 MTLYTIDT 188


>gi|17380264|sp|Q9NDA1|PSB3_TRYBB RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
           proteasome subunit beta-3
 gi|9622232|gb|AAF89685.1|AF169653_1 20S proteasome beta 3 subunit [Trypanosoma brucei]
 gi|261334718|emb|CBH17712.1| proteasome beta 3 subunit, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 205

 Score = 74.3 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 64/206 (31%), Gaps = 26/206 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     + L +      V+  D ++      +     K+  +  G +  G  G   D 
Sbjct: 2   SILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIV-MGLTGLRTDQ 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVI 121
            T  +++  + E Y  +  R     A    +   L         +E +I   D+    V 
Sbjct: 61  QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120

Query: 122 ----TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC- 173
                 +G   EPE+  +  G+          AL       EE+   A +AM  A D   
Sbjct: 121 LCATDLIGAPCEPED-YVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDS 179

Query: 174 ---------VYTNHNIVLETLKVGDE 190
                    + T   +V   +K   +
Sbjct: 180 LSGYGAVAAIVTKDKLVTRLIKGRKD 205


>gi|322825668|gb|EFZ30560.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
          Length = 205

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 16/194 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     + L +  DG  VI  D ++      +     K+  + +  ++ G  G   D 
Sbjct: 2   SILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINESIVL-GLTGLRTDQ 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVI 121
            T  E++  + E Y  +  R     A    +   L         +E +I   DK    V 
Sbjct: 61  QTFSEKVRFRNELYKLREEREIGGKAFAALVSSMLYEARFGPWFVEPVIASIDKRTGEVY 120

Query: 122 ----TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICV 174
                 +G   EPE+  +  G+          AL       EE+   A +AM  A D   
Sbjct: 121 LCAMDLIGAPCEPED-YVCAGTCAESLHGMCEALWRPGLGPEELFEVAAQAMLSACDRDS 179

Query: 175 YTNHNIVLETLKVG 188
            + +  V   +   
Sbjct: 180 LSGYGAVAAIVTRD 193


>gi|242002132|ref|XP_002435709.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
           scapularis]
 gi|215499045|gb|EEC08539.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
           scapularis]
          Length = 226

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 49/186 (26%), Gaps = 13/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG--FAGSSADAFTLL 72
            T+ + V  DG VV+  D + + G  V++      R+              ++     L 
Sbjct: 24  GTSTIAVEFDGGVVLGADSRTTTGY-VVQPTCILGRQCDFCISCRTESLKDNALLFDILN 82

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMG 125
              E        +L                   Y   L A I+ A         V     
Sbjct: 83  YFAECNRHLSRMELGEPPQVETAASVFRELCYNYRDQLLAGIICAGWDRKKGGQVYVIPL 142

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVL 182
             +     V   GSG +Y      A      + EE        + +A      +   I L
Sbjct: 143 GGMMLRQPVAMGGSGSTYVYGYVDAHFKKGMTKEECLEFVTNTLGLAMYRDGSSGGVIRL 202

Query: 183 ETLKVG 188
             +   
Sbjct: 203 AVITKD 208


>gi|307203533|gb|EFN82566.1| Proteasome subunit beta type-4 [Harpegnathos saltator]
          Length = 251

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 12/168 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               +    T+++ ++    V+IA D   S G      N  ++ ++    I+      + 
Sbjct: 37  SQSPI-TTGTSVVGIQFKDGVIIAADILGSYGSLARYRNLERIMKVNDNIILGASGDYAD 95

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------KTI 117
                    +K LE+       S    A    + +  Y R         +          
Sbjct: 96  FQCIKSNIEKKILEEQCLDDGFSLKPKALHCWLTRVMYNRRSNFDPFWNNFVIAGLENGE 155

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIAR 163
             + T         + V+A G G   A    R     ++Q + EE   
Sbjct: 156 PFLGTVDKLGTAYNDPVIATGYGAYMATPILRKAYEENSQMTKEEAIE 203


>gi|307109788|gb|EFN58025.1| hypothetical protein CHLNCDRAFT_48590 [Chlorella variabilis]
          Length = 204

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 62/204 (30%), Gaps = 23/204 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + I+ +     V I  D +  +    +  + +KV ++     I G AG   DA
Sbjct: 2   SIFEYNGSAIVAMAGKECVAIGSDLRFGVQLQTLATDYKKVYKIHDQLFI-GLAGLGTDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAK---------DWRMDKYLRNLEAMILIADKTITL 119
            TL +R   K   Y  +  R     A          + R   Y        L  D +  L
Sbjct: 61  ETLSQRFAFKHNLYKLREERDIKPSAFGQLVSATLYERRFGPYFCQPVIAGLEPDGSPYL 120

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC--- 173
                    E     M  G+     L    +L       EE+     +A+    D     
Sbjct: 121 CGMDSIGAQETAKDFMVAGTATDSLLGICESLWRPDLGPEELFETLSQALLSGQDRDCLA 180

Query: 174 -------VYTNHNIVLETLKVGDE 190
                  V T   ++  TLK   +
Sbjct: 181 GWGAVVYVITKDKVIARTLKGRMD 204


>gi|254172943|ref|ZP_04879617.1| proteasome alpha subunit [Thermococcus sp. AM4]
 gi|214033099|gb|EEB73927.1| proteasome alpha subunit [Thermococcus sp. AM4]
          Length = 260

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 56/162 (34%), Gaps = 10/162 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+ +G VV+A + +++  + +  ++  K+ ++      A  G    +      
Sbjct: 35  RGATAVGVKWNGGVVLAVEKRITS-RLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDR 93

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD-KTITLVITGM 124
                +       +      L++   +L +       +R   A +L+A       +    
Sbjct: 94  ARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEKPELYETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 E   +AIGSG + A++            E   + A+
Sbjct: 154 PSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIDMEGAIKLAI 195


>gi|149549948|ref|XP_001513174.1| PREDICTED: similar to component C5 of proteasome, partial
           [Ornithorhynchus anatinus]
          Length = 261

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 9/138 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L +  +   ++A D ++S G ++   +  K  +L    +I G +G   D  TL + +E
Sbjct: 1   TVLAIAGEDFSIVASDTRLSEGYSIHSRDNPKCYKLTDRTVI-GCSGFHGDCLTLTKIIE 59

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------ITGMGDVL 128
            +L+ Y +   ++    A    +   L +           I  +         +      
Sbjct: 60  ARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSLNPIGS 119

Query: 129 EPENGVMAIGSGGSYALS 146
             ++   A G+  +    
Sbjct: 120 YLKDNYKAGGTTNTMLQP 137


>gi|12229894|sp|O24733|PSA_THEK1 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|2398843|dbj|BAA22211.1| proteasome alpha subunit [Thermococcus sp. KS-1]
          Length = 260

 Score = 74.3 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 65/189 (34%), Gaps = 15/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+    VV+A + +++  + +  ++  K+  +      A  G    +      
Sbjct: 35  RGATAVGVKWKDGVVLAVEKRITS-KLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDR 93

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD-KTITLVITGM 124
                +       +      L++   +L +       +R   A +L+A       +    
Sbjct: 94  ARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEKPELFETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIV 181
                 E   +AIGSG + A++            + A ++A  A++   +    T   I 
Sbjct: 154 PSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEP--TAEGIE 211

Query: 182 LETLKVGDE 190
           +  + + ++
Sbjct: 212 VAYITMDEK 220


>gi|284161625|ref|YP_003400248.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
 gi|284011622|gb|ADB57575.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
          Length = 246

 Score = 74.3 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T++ V+    V++  D +V+  + +      K+  +      A     +     +  
Sbjct: 33  RGATVIGVKTKEGVILVADRRVTS-RLLEPDTIEKIYIIDDHIGAATSGLVADARILIDR 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA--------MILIADKTITLVITGM 124
            RLE ++ +       S  +LAK     K               +++        +    
Sbjct: 92  ARLEAQINRLTYDEPISVKDLAKRICDFKQQFTQFGGVRPFGVSLLIAGVDEKPRLYETD 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV---YTNHNIV 181
                 E    AIG+G + A+       +   S ++   KAM IA    +    T   I 
Sbjct: 152 PSGALLEYKATAIGAGRNVAMEFFEKEYNDNMSLDDAMVKAM-IAMGKAIESELTYDGIE 210

Query: 182 LETLKVGDE 190
           +  +KV D+
Sbjct: 211 VGMIKVDDK 219


>gi|225680770|gb|EEH19054.1| proteasome subunit beta type-1-A [Paracoccidioides brasiliensis
           Pb03]
 gi|226292463|gb|EEH47883.1| proteasome component C5 [Paracoccidioides brasiliensis Pb18]
          Length = 266

 Score = 74.3 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/223 (11%), Positives = 66/223 (29%), Gaps = 40/223 (17%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NII 58
                   +  + L +  +   ++AGD +   G ++    + K+ ++G+        +++
Sbjct: 32  HGFNPYTDNGGSTLGIAGEDYAILAGDTRSVTGYSINTRYSPKLFKIGEDGEGGEGAHLV 91

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
               G +AD   L ERL+  ++ Y  +  +     A   R+   L +           + 
Sbjct: 92  LSVVGFAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHAILG 151

Query: 119 L--------VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------------- 156
                    + +             A G+  S  +      ++ +N              
Sbjct: 152 GIDEDGRGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNFKNQYVSGPGEGNALDK 211

Query: 157 -----------SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                       A ++   A + A +  +     + +  +   
Sbjct: 212 QPRQPQPQPAEDALQLVNDAFTSAVERHIEVGDGLQIMLITKD 254


>gi|325089205|gb|EGC42515.1| 20S proteasome subunit [Ajellomyces capsulatus H88]
          Length = 260

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 16/168 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G      + +++R      +I GF G  +D   +   
Sbjct: 40  GTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRSFDNSTVI-GFGGDVSDMQYIDRV 98

Query: 75  LE-KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITG 123
           L    +E+  +    S         + K +    +                +    + + 
Sbjct: 99  LNFLSIEENYSTYGHSLNAQNLHTYLSKMMYRRRSEFNPLWNVILVAGFDSEEKPFLSSV 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAMS 167
                      +A G G   A+   R L   +   E +    A +A+ 
Sbjct: 159 DLLGNTYSAPHLATGFGAHLAIPVLRRLFPEEVPLENVKEEQAVRALQ 206


>gi|195623820|gb|ACG33740.1| proteasome subunit beta type 4 precursor [Zea mays]
          Length = 263

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++    V++A D   S G T+   +  +++ +GK +II G +G  +D   +L  
Sbjct: 44  GNSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSII-GASGEFSDFQEILRY 102

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-----------KTITLV 120
           L E  L  +      S         + +  Y R  +   L                   +
Sbjct: 103 LDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKGPKGDEKYL 162

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E   +A G G   A+   RA      +   A ++  K + +       + 
Sbjct: 163 GMVNMIGTHFEENHVATGFGNHMAIPILRAEWRDDMTFEEAVKLVEKCLVVLLYRDRSSI 222

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 223 NKFQIAKITSE 233


>gi|226502132|ref|NP_001150351.1| proteasome subunit beta type 4 [Zea mays]
 gi|194698860|gb|ACF83514.1| unknown [Zea mays]
 gi|195638598|gb|ACG38767.1| proteasome subunit beta type 4 precursor [Zea mays]
          Length = 263

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++    V++A D   S G T+   +  +++ +GK +II G +G  +D   +L  
Sbjct: 44  GNSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSII-GASGEFSDFQEILRY 102

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-----------KTITLV 120
           L E  L  +      S         + +  Y R  +   L                   +
Sbjct: 103 LDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKGPKGDEKYL 162

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E   +A G G   A+   RA      +   A ++  K + +       + 
Sbjct: 163 GMVNMIGTHFEENHVATGFGNHMAIPILRAEWRDDMTFEEAVKLVEKCLVVLLYRDRSSI 222

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 223 NKFQIAKITSE 233


>gi|115927402|ref|XP_780413.2| PREDICTED: similar to Psmb3 protein [Strongylocentrotus purpuratus]
 gi|115931137|ref|XP_001193884.1| PREDICTED: similar to Psmb3 protein [Strongylocentrotus purpuratus]
          Length = 202

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 60/191 (31%), Gaps = 14/191 (7%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  + + ++ +     V IA D +  +    +  NA+K+  +G    + G +G + D  T
Sbjct: 1   MSYNGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYL-GLSGLATDITT 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMIL-------IADKTITLVI 121
           +  RL+ +L  Y  +  R          +    Y R      +               + 
Sbjct: 60  VSNRLKFRLNLYTLRENRDVKPETFMSMVSNLLYERRFGPYFIEPVIAGLDPKTYKPFIC 119

Query: 122 TGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
                      +  +  G+          ++     + +++     + +  A D      
Sbjct: 120 NLDLIGCPMFTDDFVVAGTCTEQLYGMCESVWVPDLAPDDLFETLSQGLLNAVDRDALAG 179

Query: 178 HNIVLETLKVG 188
             +V+  ++  
Sbjct: 180 WGVVVHIIEKD 190


>gi|115480143|ref|NP_001063665.1| Os09g0515200 [Oryza sativa Japonica Group]
 gi|8671512|dbj|BAA96839.1| beta 7 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|50725360|dbj|BAD34432.1| beta 7 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|113631898|dbj|BAF25579.1| Os09g0515200 [Oryza sativa Japonica Group]
 gi|215678922|dbj|BAG96352.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215679368|dbj|BAG96508.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215701038|dbj|BAG92462.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 256

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 62/191 (32%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++I+ ++    V++A D   S G T+   +  +++ +GK + + G +G  +D   +L  
Sbjct: 37  GSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHS-LIGASGEFSDFQEILRY 95

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-----------KTITLV 120
           L E  L  +      S         + +  Y R  +   L                   +
Sbjct: 96  LDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGVKKGPKGEEKYL 155

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E   +A G G   A+   R       +   A ++  K + +       + 
Sbjct: 156 GMVNMIGTHFEENHIATGFGNHMAIPILRTEWREDMTFEEAVKLVEKCLLVLLYRDRSSI 215

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 216 NKFQIAKITTE 226


>gi|240273180|gb|EER36702.1| 20S proteasome subunit [Ajellomyces capsulatus H143]
          Length = 260

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 16/168 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G      + +++R      +I GF G  +D   +   
Sbjct: 40  GTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRSFDNSTVI-GFGGDVSDMQYIDRV 98

Query: 75  LE-KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITG 123
           L    +E+  +    S         + K +    +                +    + + 
Sbjct: 99  LNFLSIEENYSTYGHSLNAQNLHTYLSKMMYRRRSEFNPLWNVILVAGFDSEEKPFLSSV 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAMS 167
                      +A G G   A+   R L   +   E +    A +A+ 
Sbjct: 159 DLLGNTYSAPHLATGFGAHLAIPVLRRLFPEEVPLENVKEEQAVRALQ 206


>gi|34497454|ref|NP_901669.1| hypothetical protein CV_1999 [Chromobacterium violaceum ATCC 12472]
 gi|34103309|gb|AAQ59671.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 196

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 15/187 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQ---TVMKANA---RKVRRLGKGNIIAGFAGSSADAF 69
           TTI+ VRK   + IA D Q + G     +   +    +  R       ++G A       
Sbjct: 2   TTIVAVRKGDQIAIAADSQTTFGDDQKLLAPYDCFHNKIFRHGDSYLAVSGSAAHDLVLQ 61

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR--------NLEAMILIADKTITLVI 121
             L+ L+KK       +  +  +L    +   YLR           + +++       + 
Sbjct: 62  GALKELKKKDLSSRQGIFDTFRKLHPKLKDAFYLRPEEDEEDPYESSQMMVVIANAHGIF 121

Query: 122 TGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNI 180
                  +   + + AIGSG  +A+ A  A+     SA EIA   +    +  V ++  +
Sbjct: 122 GVYPMREIYEFSRIWAIGSGRKFAMGAMYAVYDQDLSAREIAEIGVRAGCEFDVSSSLPM 181

Query: 181 VLETLKV 187
            + T++V
Sbjct: 182 TVYTVEV 188


>gi|323452263|gb|EGB08137.1| hypothetical protein AURANDRAFT_69799 [Aureococcus anophagefferens]
          Length = 251

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 58/172 (33%), Gaps = 14/172 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L ++    V++A D   S G   M  + +++ + G    + G +G  +D   +L +
Sbjct: 34  GTSVLGIKYKDGVMLAADTLASYGSLAMFKDVQRISKTGSYT-LVGASGEMSDYHAILRK 92

Query: 75  LEKKLEQYPNQL---LRSSVELAKDWRMDKYLRNLEAMILIADKTIT-------LVITGM 124
           LE       N       S VE+    R   Y    +   L     +         + +  
Sbjct: 93  LEGLERDNLNANDGFEHSPVEIYSYLRAVMYQARNKFNPLWNSLVVGGYKDGKAFLGSVD 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
                 E+ V+A G G   AL   RA          A  +    + +     
Sbjct: 153 LRGTAYEDDVIATGFGAHLALPIMRAKWHADIDEGEARALLEDCLRVLFYRD 204


>gi|310790861|gb|EFQ26394.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 263

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 58/197 (29%), Gaps = 25/197 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VVIA D   S G      + +++R      ++ GF G  +D   L   
Sbjct: 40  GTSVIAMKFSEGVVIAADNLASYGSLARFTDVKRLRTFANSTVV-GFGGDVSDMQYLDRH 98

Query: 75  LEK--KLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA--------DKTITLV 120
           L      E Y       +   A +         Y R  +   L          D     +
Sbjct: 99  LSGLDIEESYDLSSDAPARLNAANLHKYLSKLLYKRRSDFDPLWNHLLVAGLDDSNKPFL 158

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---------EIARKAMSIAAD 171
                      +  +A G G + A    R        A          E+ ++ M +   
Sbjct: 159 AAADLLGTTFTSPSLATGFGSALAQPIMR-RYVPDEEAAAKLSKEQAIEVIKECMKVLFY 217

Query: 172 ICVYTNHNIVLETLKVG 188
               ++ N  +  +   
Sbjct: 218 RDARSSDNYSIAVVTKD 234


>gi|261201312|ref|XP_002627056.1| proteasome component Pre4 [Ajellomyces dermatitidis SLH14081]
 gi|239592115|gb|EEQ74696.1| proteasome component Pre4 [Ajellomyces dermatitidis SLH14081]
 gi|239611722|gb|EEQ88709.1| proteasome component Pre4 [Ajellomyces dermatitidis ER-3]
 gi|327348262|gb|EGE77119.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
          Length = 260

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 16/168 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G      + +++R      +I GF G  +D   +   
Sbjct: 40  GTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRPFDNAAVI-GFGGDVSDMQYVDRL 98

Query: 75  LE-KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITG 123
           L    +E   +    S         + K +    +                +    + + 
Sbjct: 99  LTFLDIEDNYSTYGHSLNAQNLHTYLSKVMYRRRSEFNPLWNMILVAGFDGEDKPFLSSV 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAMS 167
                      +A G G   A+   R +   +   E+I    A KA+ 
Sbjct: 159 DLLGNTYSAPHLATGFGAHLAIPVLRRVFPEETPLEDIKEEHAVKALQ 206


>gi|57641572|ref|YP_184050.1| proteasome subunit alpha [Thermococcus kodakarensis KOD1]
 gi|73921835|sp|Q5JIU9|PSA_PYRKO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|57159896|dbj|BAD85826.1| proteasome, alpha subunit [Thermococcus kodakarensis KOD1]
          Length = 260

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 65/189 (34%), Gaps = 15/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+    VV+A + +++  + +  ++  K+  +      A  G    +      
Sbjct: 35  RGATAVGVKWKDGVVLAVEKRITS-KLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDR 93

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD-KTITLVITGM 124
                +       +      L++   +L +       +R   A +L+A       +    
Sbjct: 94  ARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEKPELFETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNIV 181
                 E   +AIGSG + A++            + A ++A  A++   +    T   I 
Sbjct: 154 PSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEP--TAEGIE 211

Query: 182 LETLKVGDE 190
           +  + + ++
Sbjct: 212 VAYITMDEK 220


>gi|126136501|ref|XP_001384774.1| B-type subunit of proteasome [Scheffersomyces stipitis CBS 6054]
 gi|126091996|gb|ABN66745.1| B-type subunit of proteasome [Scheffersomyces stipitis CBS 6054]
          Length = 281

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 23/207 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T++++V+    V++A D   S G  +   N  ++ ++G+  ++ G +G 
Sbjct: 42  MNTQQPI-ITGTSVISVKFKDGVILAADNLGSYGSLLRFNNIERLIKVGQETVV-GISGD 99

Query: 65  SADAFTLLERL------EKKLEQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA 113
            +D   +   L      E+  +      LR+             R  K      A+I+  
Sbjct: 100 ISDLQQIERILDELETTEEVYDSDGGHNLRAPHVHEYLSRVLYNRRSKMNPLWNAIIVGG 159

Query: 114 --DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEIAR 163
             D     +       +      +A G G   A+   R L+             A ++  
Sbjct: 160 FNDDRTPFLKYIDLLGVTYGASTLATGFGSHLAVPLLRQLIPNDVDYVNVSEEQARKVVE 219

Query: 164 KAMSIAADICVYTNHNIVLETLKVGDE 190
             M +        +    L T+K   E
Sbjct: 220 DCMRVLFYRDARASDKFSLVTIKRSAE 246


>gi|223937009|ref|ZP_03628917.1| 20S proteasome, A and B subunits [bacterium Ellin514]
 gi|223894290|gb|EEF60743.1| 20S proteasome, A and B subunits [bacterium Ellin514]
          Length = 203

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 22/182 (12%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMK-----ANARKVRRLGKGNIIAGFAGSSADAFTL 71
           TI+ V+K+G V IA D Q + G T +         + +R         G+        +L
Sbjct: 3   TIVVVKKNGEVAIAADTQTTSGGTKLSAGFKTQKEKILRFEDTYIGFVGYCAHRDVFESL 62

Query: 72  LER----LEKKLEQYPNQLLRSSVELAKDWRMDKYL-----RNLEAMILIADKTITLVIT 122
           +E+    L+ K  ++  +       + K+                 M ++      +   
Sbjct: 63  MEKRPSDLDFKSRRHIFETFLKLHPVLKEDFFVNSKEEDSAYETSQMTIVIANPHGIFDV 122

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC--------V 174
                +       AIGSG  YAL A      T+ +A E+A   +  A +          V
Sbjct: 123 NSDRNVTEIEAFWAIGSGREYALGAMHQAYDTRATAREVAIGGVLAACEFDPWSGLPYTV 182

Query: 175 YT 176
           YT
Sbjct: 183 YT 184


>gi|194699980|gb|ACF84074.1| unknown [Zea mays]
          Length = 263

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++    V++A D   S G T+   +  +++ +GK +II G +G  +D   +L  
Sbjct: 44  GNSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSII-GASGEFSDFQEILRY 102

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-----------KTITLV 120
           L E  L  +      S         + +  Y R  +   L                   +
Sbjct: 103 LDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKGPKGDEKYL 162

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     E   +A G G   A+   RA      +   A ++  K + +       + 
Sbjct: 163 GMVNMIGTHFEEDHVATGFGNHMAIPILRAEWRDDMTFEEAVKLVEKCLVVLLYRDRSSI 222

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 223 NKFQIAKITSE 233


>gi|71755781|ref|XP_828805.1| proteasome subunit beta 3 [Trypanosoma brucei TREU927]
 gi|70834191|gb|EAN79693.1| proteasome beta 3 subunit, putative [Trypanosoma brucei]
          Length = 205

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 64/206 (31%), Gaps = 26/206 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     + L +      V+  D ++      +     K+  +  G +  G  G   D 
Sbjct: 2   SILTYSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLYVINDGIV-MGLTGLRTDQ 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVI 121
            T  +++  + E Y  +  R     A    +   L         +E +I   D+    V 
Sbjct: 61  QTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVY 120

Query: 122 ----TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC- 173
                 +G   EPE+  +  G+          AL       EE+   A +AM  A D   
Sbjct: 121 LCATDLIGAPCEPED-YVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDS 179

Query: 174 ---------VYTNHNIVLETLKVGDE 190
                    + T   +V   +K   +
Sbjct: 180 LSGYGAVAAIVTKDKLVTRLIKGRKD 205


>gi|113867391|ref|YP_725880.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Ralstonia
           eutropha H16]
 gi|497267|gb|AAA21601.1| ORF3 [Ralstonia eutropha H16]
 gi|113526167|emb|CAJ92512.1| ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Ralstonia
           eutropha H16]
          Length = 225

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 66/191 (34%), Gaps = 19/191 (9%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + VRK   V IA D  V+ G T +      N +          +AG         TL
Sbjct: 2   TTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPVGDGFIALAGTTAHFPVMRTL 61

Query: 72  LERLEKKLEQY------------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
           L  L ++                  +L        K+   D Y  +    ++     I  
Sbjct: 62  LAGLGEECRLGSRDDVFRTFLKVHEKLKSDYFVNTKEDEDDPYESSQIVCLIANPAGIFG 121

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNH 178
           V +     +   +    IGSG +YAL A  A+       A EIAR  +    +    +  
Sbjct: 122 VYS--YREVFSFDRFWGIGSGRNYALGAMHAVYDRPDLDAGEIARIGVDAGVEFDKSSAG 179

Query: 179 NIVLETLKVGD 189
            I + T+++ +
Sbjct: 180 PIEVHTVRLHE 190


>gi|303243799|ref|ZP_07330139.1| proteasome endopeptidase complex, alpha subunit
           [Methanothermococcus okinawensis IH1]
 gi|302485735|gb|EFL48659.1| proteasome endopeptidase complex, alpha subunit
           [Methanothermococcus okinawensis IH1]
          Length = 274

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 63/195 (32%), Gaps = 29/195 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    V++A D +++  + +   +  K+ ++    + A     +     +  
Sbjct: 34  RGTTAIGIKCKDGVILAVDRRITS-KLIEVCSIEKIFQIDDHIMAATSGLVADARVLIDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++ +       +   LAK     K                +I   D+  + +   
Sbjct: 93  ARVEAQINRITYGEPITVEALAKKICDIKQAYTQHGGARPFGLSLLIAGIDRHSSRLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT------- 176
                  E    AIGSG   A+       S   +        +  A ++ +YT       
Sbjct: 153 DPSGALIEYKATAIGSGRPAAMEILEEKYSEDLT--------LEGALELAIYTLGKTTDG 204

Query: 177 ---NHNIVLETLKVG 188
                N+ +  +K  
Sbjct: 205 ELKPENVDMAVIKSE 219


>gi|325092329|gb|EGC45639.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 192

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  +  K+        + G  G + D  ++ + L  K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNSFPKIFNYAPSTYL-GLTGLATDVSSVSDLLRYKVN 59

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R                  R   Y  +     + +      +        ++ 
Sbjct: 60  MYRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+           L       +++     +A+  A D    +     +  ++ 
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQALLNAVDRDALSGWGAHVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|288560613|ref|YP_003424099.1| proteasome alpha subunit [Methanobrevibacter ruminantium M1]
 gi|288543323|gb|ADC47207.1| proteasome alpha subunit [Methanobrevibacter ruminantium M1]
          Length = 294

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 61/188 (32%), Gaps = 17/188 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L ++    VV+  D + ++ + V   +  K+ ++     +A     +     +  
Sbjct: 36  RGTTSLGLKSKDGVVLIVDKR-TVSRLVEAKSIEKIFQIDDHIGVATSGLVADARALVER 94

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM---------ILIADKTITLVITG 123
            R+E ++ +           LAK     K L               I   +   T +   
Sbjct: 95  ARIESQINKITYNEPILVGGLAKKICDLKQLYTQNGGVRPFGSALIIGGVNGEETRLYET 154

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD-ICVYTNHN 179
                  E    AIGSG   A+           S E+   +   A+  A +     T  +
Sbjct: 155 DPSGALIEYKATAIGSGVQAAVDVFEERYEEDLSLEDAINLGLDALYEATEGR--TTEDS 212

Query: 180 IVLETLKV 187
           + +  ++V
Sbjct: 213 VEIAVIEV 220


>gi|330914585|ref|XP_003296699.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
 gi|311331040|gb|EFQ95206.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
          Length = 260

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 65/208 (31%), Gaps = 31/208 (14%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T++L  +    VVIA D   S G      + +++R+     ++ GF G  
Sbjct: 32  HTQSPI-VTGTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRKF-NDEVVVGFGGDV 89

Query: 66  ADAFTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADK 115
           +D   L   L    + +  +    S         + K +              +I+  D 
Sbjct: 90  SDMQYLDRLLNSLDIRENYSSSENSLNAKNLHTYLSKVMYNRRSKFDPLWNHMLIVGMDG 149

Query: 116 T-ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAEEIARKAM 166
                + +         +  +A G G   A    R ++  +          A E  ++ M
Sbjct: 150 EKKPFLASADLLGTTFSSPSLATGFGAHLAQPILRTILPDEAAVENVTREQAVEKIKECM 209

Query: 167 SI-----AADICVY-----TNHNIVLET 184
            +     A  +  Y     T   + L+ 
Sbjct: 210 KVLFYRDARSMDKYSIAVVTKDGVDLDE 237


>gi|307195647|gb|EFN77489.1| Proteasome subunit beta type-3 [Harpegnathos saltator]
          Length = 192

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 57/181 (31%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           ++    V IA D +  +    +  + +K+  +G    ++   G ++D  T++ERL  +L 
Sbjct: 1   MKGKNCVAIAADRRFGIQAQTIMCDFQKIYEMGSHLYVS-LPGLASDTQTVMERLRFRLN 59

Query: 81  QYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE-P 130
            Y  +  R             L  + R   Y        L    +   +           
Sbjct: 60  LYELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLDPVTSEPFICNMDLIGSRNI 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
               +  G+          +L       E++     +A+  A D    +    V+  ++ 
Sbjct: 120 AEDFVVGGTCTEQLYGMCESLYEPDLGPEDLFETISQALVNAFDRDAISGWGAVVYIIEK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|168036644|ref|XP_001770816.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677875|gb|EDQ64340.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 204

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 65/201 (32%), Gaps = 23/201 (11%)

Query: 12  KMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             + + ++ +       IA D ++ +    +  + +++ ++     I G +G + D  T+
Sbjct: 5   SYNGSALIAMVGKNCFAIASDRRLGVNFQTIACDFQRIFKIHDKLYI-GLSGLATDVQTM 63

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------DKTITLVITG 123
            +RL+ + + Y  +  R+         +   L                  D     + T 
Sbjct: 64  HQRLQFRHKLYQLREERNMRPETFASLVSAILYEKRFGPYFCEPIIAGLNDDGTPFICTT 123

Query: 124 MG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC------ 173
                 +     +  G+       A  ++       +E+     +A+  + D        
Sbjct: 124 DLIGAKQLAKDFVVSGTASESLYGACESMYKPDLGPDELFEVISQALLASVDRDCISGWG 183

Query: 174 ----VYTNHNIVLETLKVGDE 190
               V T   ++ +TLK   +
Sbjct: 184 GIVHVVTPDQVITKTLKGRMD 204


>gi|254579421|ref|XP_002495696.1| ZYRO0C00792p [Zygosaccharomyces rouxii]
 gi|238938587|emb|CAR26763.1| ZYRO0C00792p [Zygosaccharomyces rouxii]
          Length = 290

 Score = 73.5 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 16/166 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + TT + +R +  VV A +  VS    V K N +        ++   ++G   D   L+ 
Sbjct: 33  NGTTSIGIRCNDGVVFAVEKLVSSKLLVPKRNVKIQTI--DRHVGCVYSGLIPDGRHLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++ + +      S    A   R+  Y+             + A+    D     +  
Sbjct: 91  RGREEAQSHKKTFGESIPLQALADRLGYYVQAHTLYNSVRPFGVTAIFGGVDDKGPHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKA 165
                        A G G   A +    ++       SA++  ++A
Sbjct: 151 LEPSGTFWGYKGAATGKGRQTAKAELEKVIDQHPEGLSAKDAVKEA 196


>gi|71650132|ref|XP_813770.1| proteasome beta 3 subunit [Trypanosoma cruzi strain CL Brener]
 gi|71653810|ref|XP_815536.1| proteasome beta 3 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70878686|gb|EAN91919.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
 gi|70880598|gb|EAN93685.1| proteasome beta 3 subunit, putative [Trypanosoma cruzi]
          Length = 205

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 16/179 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +     + L +  DG  VI  D ++      +     K+  + +  ++ G  G   D 
Sbjct: 2   SILTYSGGSCLAMAGDGCFVIVSDNRLGEQLKTISMEVPKLHVINESIVL-GLTGLRTDQ 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVI 121
            T  E++  + E Y  +  R     A    +   L         +E +I   DK    V 
Sbjct: 61  QTFSEKVRFRNELYKLREEREIGGKAFAALISSMLYEARFGPWFVEPVIASIDKKTGEVY 120

Query: 122 ----TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
                 +G   EPE+  +  G+          AL      +EE+   A +AM  A D  
Sbjct: 121 LCAMDLIGAPCEPED-YVCAGTCAESLHGMCEALWRPGLGSEELFEVAAQAMLSACDRD 178


>gi|251773198|gb|EES53750.1| putative 20S proteasome beta-subunit [Leptospirillum
           ferrodiazotrophum]
          Length = 275

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 47/154 (30%), Gaps = 13/154 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TTIL       V++AGD + +    +M     K+  +  G+ +   +GS A A  +  
Sbjct: 52  HGTTILAFHFSEGVLVAGDRRATASNRIMSNRVDKILEID-GSALLAISGSPAMALEMGR 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----------DKTITLVIT 122
            L+  L+ Y    L       K   + + L+    M +             D     +  
Sbjct: 111 ILDHSLKFYRRSQLAEISLEGKLRILAQLLKENLPMAVEGIGAVAPLFVARDGEAVRIYF 170

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                           GSG        R L    
Sbjct: 171 YDILGAHFEGVEFSVGGSGSPEVQGILRYLDRWG 204


>gi|6319430|ref|NP_009512.1| Pre7p [Saccharomyces cerevisiae S288c]
 gi|130882|sp|P23724|PSB1_YEAST RecName: Full=Proteasome component C5; AltName: Full=Multicatalytic
           endopeptidase complex subunit C5; Flags: Precursor
 gi|11514003|pdb|1G0U|L Chain L, A Gated Channel Into The Proteasome Core Particle
 gi|11514017|pdb|1G0U|Z Chain Z, A Gated Channel Into The Proteasome Core Particle
 gi|178847471|pdb|2ZCY|L Chain L, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847485|pdb|2ZCY|Z Chain Z, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847513|pdb|3BDM|L Chain L, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847527|pdb|3BDM|Z Chain Z, Yeast 20s Proteasome:glidobactin A-Complex
 gi|323462947|pdb|3NZJ|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462961|pdb|3NZJ|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462975|pdb|3NZW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462989|pdb|3NZW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323463003|pdb|3NZX|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463017|pdb|3NZX|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|171468|gb|AAA68908.1| proteasome subunit [Saccharomyces cerevisiae]
 gi|218467|dbj|BAA00725.1| proteasome subunit [Saccharomyces cerevisiae]
 gi|463267|emb|CAA55053.1| YBL0407 [Saccharomyces cerevisiae]
 gi|536057|emb|CAA84861.1| PRE7 [Saccharomyces cerevisiae]
 gi|45270814|gb|AAS56788.1| YBL041W [Saccharomyces cerevisiae]
 gi|151946352|gb|EDN64574.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
 gi|207347858|gb|EDZ73901.1| YBL041Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272740|gb|EEU07713.1| Pre7p [Saccharomyces cerevisiae JAY291]
 gi|259144804|emb|CAY77743.1| Pre7p [Saccharomyces cerevisiae EC1118]
 gi|285810292|tpg|DAA07077.1| TPA: Pre7p [Saccharomyces cerevisiae S288c]
 gi|323306044|gb|EGA59778.1| Pre7p [Saccharomyces cerevisiae FostersB]
 gi|323338788|gb|EGA80003.1| Pre7p [Saccharomyces cerevisiae Vin13]
 gi|323349870|gb|EGA84083.1| Pre7p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323356250|gb|EGA88054.1| Pre7p [Saccharomyces cerevisiae VL3]
          Length = 241

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 63/212 (29%), Gaps = 30/212 (14%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  TIL +  +   V+AGD +     ++      KV   G   +++   G +
Sbjct: 19  HQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSA-NGFA 77

Query: 66  ADAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
           AD   L++R +  ++ Y            S+    +     K         +IA      
Sbjct: 78  ADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDG 137

Query: 120 ---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----------------NSAE 159
              V +             A G+  S  +      ++ +                  S E
Sbjct: 138 KGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVE 197

Query: 160 E---IARKAMSIAADICVYTNHNIVLETLKVG 188
           E   + R + + A +  +     + +  +   
Sbjct: 198 EVIKLVRDSFTSATERHIQVGDGLEILIVTKD 229


>gi|319794383|ref|YP_004156023.1| 20S proteasome a and b subunits [Variovorax paradoxus EPS]
 gi|315596846|gb|ADU37912.1| 20S proteasome A and B subunits [Variovorax paradoxus EPS]
          Length = 197

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 74/195 (37%), Gaps = 24/195 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-----GNIIAGFAGSSADAFT 70
           TT++ VRK G V +A D  V+ G T +   A K +++       G  +   AG++A    
Sbjct: 2   TTVVAVRKGGQVTMAADSLVTFGDTRLSHRAEKNQKIFTVEDAAGTSLFAMAGAAAHFLV 61

Query: 71  LLERLEKKLEQY----------------PNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
           L   L  +  +                    L  S     K+   + Y  +   M++   
Sbjct: 62  LQHALAAQEREKLLFGSKHEIFRTFTMLHPVLKDSFFMQTKEDDHEPYESSQFTMLMANQ 121

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADIC 173
             I  + +     +       AIGSG S+AL A  A       SA ++A   ++ A +  
Sbjct: 122 SGIYGIYS--YREVFEFKEFWAIGSGRSFALGAMHAAYDIKSRSARDVAEAGIAAACEFD 179

Query: 174 VYTNHNIVLETLKVG 188
             +   + + TLK+ 
Sbjct: 180 RNSAPPVDVLTLKLK 194


>gi|146332761|gb|ABQ22886.1| proteasome subunit beta type 7 precursor-like protein [Callithrix
           jacchus]
          Length = 194

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 11/139 (7%)

Query: 57  IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--- 113
           I    AG++AD     + +   LE +     R    +  +  + + L   +  I  A   
Sbjct: 1   IYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVL 60

Query: 114 ---DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK--AMSI 168
              D T   + +        +   + +GSG   A++            EE A+K  + +I
Sbjct: 61  GGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFKPDMEEEE-AKKLVSEAI 119

Query: 169 AADI--CVYTNHNIVLETL 185
           AA I   + +  NI L  +
Sbjct: 120 AAGIFNDLGSGSNIDLCVI 138


>gi|296415988|ref|XP_002837664.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633544|emb|CAZ81855.1| unnamed protein product [Tuber melanosporum]
          Length = 260

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 13/173 (7%)

Query: 4   MGDKH-YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           M ++H  +  +  T+++ ++ +G VVIA D   S G      N  +++++G   ++ G  
Sbjct: 28  MPNQHTQSPIVTGTSVVALKFNGGVVIAADNLASYGSLARFTNVERLKQVGTHTVV-GAG 86

Query: 63  GSSADAFTLLERL--EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILI------ 112
           G  +D   L E+L     +++                 + K  Y R  +   L       
Sbjct: 87  GDISDMQYLHEKLLDSLIIKEEYQNDGHHLRASHIYRYLSKVLYQRRCKFDPLWNTLLVA 146

Query: 113 -ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
             D     + +            +A G G   A+   R +   + + E I R+
Sbjct: 147 GWDDGKPFLASADLLGTTFSAPALATGFGAHLAVPLLRRVCPDEAAVENITRE 199


>gi|189193573|ref|XP_001933125.1| proteasome component PRE4 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187978689|gb|EDU45315.1| proteasome component PRE4 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 260

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 69/208 (33%), Gaps = 31/208 (14%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T++L  +    VVIA D   S G      + +++R+     ++ GF G  
Sbjct: 32  HTQSPI-VTGTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRKF-NDEVVVGFGGDV 89

Query: 66  ADAFTLLERLEKK-LEQYPNQLLRSS------VELAK--DWRMDKYLRNLEAMILIA--D 114
           +D   L   L    + +  +    S         LAK    R  K+      M+++    
Sbjct: 90  SDMQYLDRLLNSLDIRENYSSSENSLNAKNLHTYLAKVMYNRRSKFDPLWNHMLIVGMDG 149

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAEEIARKAM 166
           +    + +         +  +A G G   A    R ++  +          A E  ++ M
Sbjct: 150 EKKPFLASADLLGTTFSSPSLATGFGAHLAQPILRTILPDEAAVENVTREQAVEKIKECM 209

Query: 167 SI-----AADICVY-----TNHNIVLET 184
            +     A  +  Y     T   + L+ 
Sbjct: 210 KVLFYRDARSMDKYSIAVVTKDGVDLDE 237


>gi|12323391|gb|AAG51672.1|AC010704_16 putative 20S proteasome beta subunit PBC2; 7006-8626 [Arabidopsis
           thaliana]
          Length = 191

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 13/165 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +       IA D ++ +    +  + +++ ++     I G +G + D  TL +RL  + +
Sbjct: 1   MVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFI-GLSGLATDVQTLYQRLVFRHK 59

Query: 81  QYPNQLLRSSVELAKDWRMDKYLR--NLEAMILI------ADKTITLVITGMG-DVLEPE 131
            Y  +  R          +   L        +         D     + T       E  
Sbjct: 60  LYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELA 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
              +  G+       A  A+      AEE+     +A+  + D  
Sbjct: 120 KDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRD 164


>gi|257386103|ref|YP_003175876.1| proteasome endopeptidase complex [Halomicrobium mukohataei DSM
           12286]
 gi|302595827|sp|C7NVQ4|PSB_HALMD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
           beta subunit; AltName: Full=Proteasome core protein
           PsmB; Flags: Precursor
 gi|257168410|gb|ACV46169.1| Proteasome endopeptidase complex [Halomicrobium mukohataei DSM
           12286]
          Length = 237

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 10/171 (5%)

Query: 27  VVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQ 85
           VVIA D + SLG   V   + +KV ++     +    GS   A + +  L  + + Y  +
Sbjct: 54  VVIATDMRASLGGRFVSNKSVQKVEQIHPSAAL-TLVGSVGGAQSFIRTLRSESDLYEVR 112

Query: 86  LLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVLEPENGVMAIGSG 140
                   A       + R      +       D+  + V +        E+     GSG
Sbjct: 113 RGEPMSISALATLAGNFARGGPFFAINPILGGVDEEGSHVYSIDPAGGVMEDDYTVTGSG 172

Query: 141 GSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
              A            S   AEE+A +A+  A +    + + + + T+   
Sbjct: 173 MQVAHGKLEDRYHDDLSMEEAEELAVEAVYAATERDTGSGNGVYVATVTGD 223


>gi|71030968|ref|XP_765126.1| proteasome precursor [Theileria parva strain Muguga]
 gi|68352082|gb|EAN32843.1| proteasome precursor, putative [Theileria parva]
          Length = 279

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 71/201 (35%), Gaps = 48/201 (23%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ ++ +  VV+  DG+ S GQ V    ARK+ R+     +   +GS+AD+ TL   
Sbjct: 51  GTTIIGMKFEDGVVLVADGRTSSGQIVANRVARKITRILPNIFML-RSGSAADSQTLSTI 109

Query: 75  LEKKLEQYPNQLLRS-----------------------------------------SVEL 93
           +    +    QL  +                                         +   
Sbjct: 110 IRYHAQSLKQQLKPAGRFPPSTRDEMDIDELSEFSGFKTNEYKLSSLENTPLVRSLARAT 169

Query: 94  AKDWRMDKYLRNLEAMILIADKTITLVI--TGMGDVLEPENGVMAIGSGGSYALSAARAL 151
                  + +     ++   D     +   T  G ++E E+  +A GSG S+  +  ++ 
Sbjct: 170 HNLVHEYRNMLYCGVILAGVDSLGAQIFNVTVGGTLIEIED-FLATGSGSSFITAFLQSN 228

Query: 152 MSTQNSAEE---IARKAMSIA 169
                S +E   + ++++  A
Sbjct: 229 YKKNLSQDECLKLLKRSIEYA 249


>gi|3114281|pdb|1RYP|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114295|pdb|1RYP|1 Chain 1, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513424|pdb|1G65|L Chain L, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513438|pdb|1G65|Z Chain Z, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|14488817|pdb|1FNT|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488831|pdb|1FNT|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|20150388|pdb|1JD2|L Chain L, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150395|pdb|1JD2|S Chain S, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|75765711|pdb|1Z7Q|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765725|pdb|1Z7Q|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|93279379|pdb|2F16|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279393|pdb|2F16|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279667|pdb|2FNY|L Chain L, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279681|pdb|2FNY|Z Chain Z, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032213|pdb|2FAK|L Chain L, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032227|pdb|2FAK|Z Chain Z, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490854|pdb|2GPL|L Chain L, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490868|pdb|2GPL|Z Chain Z, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016378|pdb|3D29|L Chain L, Proteasome Inhibition By Fellutamide B
 gi|190016392|pdb|3D29|Z Chain Z, Proteasome Inhibition By Fellutamide B
 gi|197725332|pdb|3E47|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725346|pdb|3E47|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939223|pdb|3DY3|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939237|pdb|3DY3|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939251|pdb|3DY4|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939265|pdb|3DY4|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828248|pdb|3GPJ|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828262|pdb|3GPJ|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588332|pdb|3GPT|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588346|pdb|3GPT|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588360|pdb|3GPW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588374|pdb|3GPW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588554|pdb|3HYE|L Chain L, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588568|pdb|3HYE|Z Chain Z, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|298508234|pdb|1VSY|M Chain M, Proteasome Activator Complex
 gi|298508248|pdb|1VSY|1 Chain 1, Proteasome Activator Complex
 gi|298508450|pdb|3L5Q|Q Chain Q, Proteasome Activator Complex
 gi|298508464|pdb|3L5Q|3 Chain 3, Proteasome Activator Complex
 gi|330689392|pdb|3MG4|L Chain L, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689406|pdb|3MG4|Z Chain Z, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 222

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 30/211 (14%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +      +  TIL +  +   V+AGD +     ++      KV   G   +++   G +A
Sbjct: 1   QFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSA-NGFAA 59

Query: 67  DAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITL- 119
           D   L++R +  ++ Y            S+    +     K         +IA       
Sbjct: 60  DGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGK 119

Query: 120 --VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----------------NSAEE 160
             V +             A G+  S  +      ++ +                  S EE
Sbjct: 120 GAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEE 179

Query: 161 ---IARKAMSIAADICVYTNHNIVLETLKVG 188
              + R + + A +  +     + +  +   
Sbjct: 180 VIKLVRDSFTSATERHIQVGDGLEILIVTKD 210


>gi|156542911|ref|XP_001601321.1| PREDICTED: similar to proteasome subunit N3 [Nasonia vitripennis]
          Length = 262

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 17/185 (9%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M      +    T+++ ++    +VIA D   S G      N  +V ++    I+ G  G
Sbjct: 40  MQRTQSPM-TTGTSVIGLQFKDGIVIAADVLASYGSLARFRNCERVIKVNDNIIL-GAGG 97

Query: 64  SSADAFTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIA 113
             AD   L   +E+K L++       +    +    + + +              +I   
Sbjct: 98  DYADYQYLRSIIEQKILDERCLDDGFTLKPKSLHCWLTRVMYNKRSKFDPLWNNFIIGGI 157

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           +     + T         + V+A G G   A              T+  A ++  KAM +
Sbjct: 158 EDDKLFLGTVDKLGTAFTDPVIATGYGAYMASPLLNKAYEANPEMTEQEATDLIYKAMQV 217

Query: 169 AADIC 173
                
Sbjct: 218 LFYRD 222


>gi|240104096|ref|YP_002960405.1| proteasome subunit alpha [Thermococcus gammatolerans EJ3]
 gi|259535085|sp|C5A2C2|PSA_THEGJ RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|239911650|gb|ACS34541.1| Peptidase T1A, 20S proteasome alpha-subunit (psmA) [Thermococcus
           gammatolerans EJ3]
          Length = 260

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 10/162 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+  G VV+A + +++  + +  ++  K+ ++      A  G    +      
Sbjct: 35  RGATAVGVKWKGGVVLAVEKRITS-RLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDR 93

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD-KTITLVITGM 124
                +       +      L++   +L +       +R   A +L+A       +    
Sbjct: 94  ARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEKPELYETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 E   +AIGSG + A++      S     E   + A+
Sbjct: 154 PSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDIDMEGAIKLAI 195


>gi|225705212|gb|ACO08452.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
          Length = 156

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  DG VV+  D +VS G+TV+     K+  L    I    +GS+ADA T+ E 
Sbjct: 18  GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHD-KIYCALSGSAADAQTIAEM 76

Query: 75  LEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKTITL 119
           +  +L+ +  ++       +          KY   L A +++A      
Sbjct: 77  VNYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRG 125


>gi|315045598|ref|XP_003172174.1| hypothetical protein MGYG_09061 [Arthroderma gypseum CBS 118893]
 gi|311342560|gb|EFR01763.1| hypothetical protein MGYG_09061 [Arthroderma gypseum CBS 118893]
          Length = 261

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 13/171 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+    VVIA D   S G      + +++R     +++ GF G  +D   +   
Sbjct: 40  GTSVIGVKFKDGVVIASDNLGSYGSLARFTDLKRLRAFDNSSVV-GFGGDISDMQYIDRV 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA--------DKTITLVIT 122
           L     Q            AK+         Y R  +   L          D+    + +
Sbjct: 99  LNTLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSS 158

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                       +A G G   A+   R L   ++  + I ++A   A   C
Sbjct: 159 ADLLGTTYSAPALATGFGAHLAVPILRRLFPEEDGIDNITKEAAVDAMKQC 209


>gi|19073955|ref|NP_584561.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
           GB-M1]
 gi|19068597|emb|CAD25065.1| 26S PROTEASOME BETA SUBUNIT, theta chain [Encephalitozoon cuniculi
           GB-M1]
          Length = 205

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 53/177 (29%), Gaps = 13/177 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            +  +IL +     V I  D ++ +    +  +  ++ R+G    + G      D   LL
Sbjct: 7   FYGGSILAMASSKGVAIMCDKRLGMSSITVSKDFTRIHRIGPRLYV-GLPAFVPDTQVLL 65

Query: 73  ERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
            ++ K    +  +  R             L    R   Y+       L +D    +    
Sbjct: 66  RKIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTSDGKPYISGMD 125

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTN 177
               +      +A+G+     +    AL       E +     +A   A D    + 
Sbjct: 126 CIGSIASPGDFVAVGTADKNLMGICEALYRPDMDEENLFVTCVQAFLNAIDRDALSG 182


>gi|195440110|ref|XP_002067892.1| GK22295 [Drosophila willistoni]
 gi|194163977|gb|EDW78878.1| GK22295 [Drosophila willistoni]
          Length = 212

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 54/202 (26%), Gaps = 18/202 (8%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +     +    T++ +  +    IA D +++    + K  ++          + G  G 
Sbjct: 1   MNIFNPHEYIGGTLVAIAGNDFATIACDTRLTNDFNIRKMRSQSKLFDVSPQTVLGSVGC 60

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVE--LAKDWRMDKYLRNLEAMILIADKTITLV-- 120
             D   LL  +     +Y    L       LA      K  R      ++       +  
Sbjct: 61  WCDTLALLSLVRSFSLKYELDNLMPVCPDSLASMLTRTKLTRQYFVSTVVTGIDSNGLGA 120

Query: 121 -ITGMGDVLEPENGVMAIGSGGSYALSAA---RALMSTQNSA----------EEIARKAM 166
                             G+GG   L              +A           +I+ +A 
Sbjct: 121 VYFNDPIGNYLRLPYHISGTGGRIILPTLNWFEGNEEDHMNAITTSLTVDKTVQISMEAF 180

Query: 167 SIAADICVYTNHNIVLETLKVG 188
             A D   +T + + +  +   
Sbjct: 181 RAARDCDSFTGNCMFINIITRE 202


>gi|330801313|ref|XP_003288673.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
 gi|325081295|gb|EGC34816.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
          Length = 205

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 55/191 (28%), Gaps = 14/191 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +    + +     V IA D +  + Q  +  +  KV R+       G +G   DA
Sbjct: 2   SIMAYNGGACIVMTGKNCVAIASDLRFGIQQQTISNDYPKVYRV-NDKCFIGISGLVTDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITL 119
            TL +++  +   Y  +  R          +   L                L        
Sbjct: 61  QTLHQKIVFRHNLYKLREERDMSPKVVTNLIANMLYEKRFGPYFTEPLICGLEGPDNTPY 120

Query: 120 VITGMGDVLEPE-NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           +        + + +  + +G+           L     + +E+     + M  + +    
Sbjct: 121 ISGMDLIGAQVQTDDFLVVGTMTPAMYGVCETLYKKDMNEDELFETISQCMLASLERDAL 180

Query: 176 TNHNIVLETLK 186
           +    V+  + 
Sbjct: 181 SGWGAVVNIIT 191


>gi|242786412|ref|XP_002480800.1| proteasome component Pre4, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218720947|gb|EED20366.1| proteasome component Pre4, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 260

 Score = 72.7 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 55/193 (28%), Gaps = 20/193 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V +A D   S G      +  ++R       I GF G  +D   +   
Sbjct: 40  GTSVIAVKFNGGVAMATDNLASYGSLARFTDVNRIRTFDD-AAIVGFGGDVSDMQYIDRL 98

Query: 75  LEK-KLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           L   ++ +       +         + K  Y R  E   L                + + 
Sbjct: 99  LGSIQIRENYTATGSTLNAKNLHTYLAKVFYKRRSEMNPLWNHILVAGFDSDGSPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----ARKAMSIAA----DICVY 175
                      +A G G   A+   R L       E I    A +A+             
Sbjct: 159 DLLGTTFSGPHLATGFGAHLAVPILRRLFPEDTPIENISKEQAIQALRDCMRVLFYRDAR 218

Query: 176 TNHNIVLETLKVG 188
           +     L  +   
Sbjct: 219 SLDQYTLAVITKD 231


>gi|115966524|ref|XP_001188161.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 255

 Score = 72.7 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 56/179 (31%), Gaps = 15/179 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T+ L ++ +G V++A D   S G      N  +V ++    ++ G    +   
Sbjct: 39  NPM-VTGTSTLGMKFNGGVILAADMLGSYGSLARFRNISRVTKVNDNTVLTGAGDYADFQ 97

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTITL 119
           F      +K ++        S    A    + + +              ++       + 
Sbjct: 98  FVSELLDQKIIDDECLNDGHSFTPKALFSWLTRIMYNRRSKFNPIWNTMVLGGFQNGESF 157

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADIC 173
           +       +  E+  +A G G   AL   R         T+  A  +  + + +     
Sbjct: 158 LGYVDKIGVAYESPHVACGYGAYIALPMMRDAHEKNSNMTEQEARAVVERCLKVLFYRD 216


>gi|255938700|ref|XP_002560120.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584741|emb|CAP74267.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 260

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 58/193 (30%), Gaps = 20/193 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+ +G V IA D   S G     ++ +++R  G    + GF G  +D   L   
Sbjct: 40  GTSVVGVKFNGGVAIATDNLASYGSLARFSDVKRLRNFGD-KAMVGFGGDVSDMQYLDRL 98

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIA--------DKTITLVITG 123
           L    +++  +              + K  Y R  E   L           +    + + 
Sbjct: 99  LDSMDIKENYSHHGNMLNAKNLHTYLAKVFYKRRSEFNPLWNHVLVAGFDGQGEPFLSSA 158

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAEEIARKAMSIAADICVY 175
                      +A G G   A+   R                A E  ++ + +       
Sbjct: 159 DLLGTTFSAPHLATGFGAHLAVPILRRKFPEGTPLEQVSKEDAVEALKECLKVLFYRDAR 218

Query: 176 TNHNIVLETLKVG 188
           +     +  +   
Sbjct: 219 SADKYSIAVITKD 231


>gi|239788859|dbj|BAH71088.1| ACYPI000065 [Acyrthosiphon pisum]
          Length = 157

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G +V+A D + + GQ +     +K+  +    ++   AG +AD      
Sbjct: 71  HGTTTLGFLYQGGIVLAVDSRATGGQYIGSQCMKKIVEINDF-MLGTLAGGAADCVYWDR 129

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD 100
            L K+   +  +        A    M 
Sbjct: 130 VLSKQCRLHELRNKERISVTAASKIMS 156


>gi|260793493|ref|XP_002591746.1| hypothetical protein BRAFLDRAFT_123512 [Branchiostoma floridae]
 gi|229276956|gb|EEN47757.1| hypothetical protein BRAFLDRAFT_123512 [Branchiostoma floridae]
          Length = 201

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 17/167 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L ++ +G V++A D        V K +  K+ +L    I+ G  G S D     E ++K 
Sbjct: 5   LGIQGNGFVILAADNIAGRSVLVYKHDHDKMHKLSD-KILMGCTGESGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIAD------KTITLVITGMGDVL 128
           ++ Y  +   +    A      K    YLR+     +              +        
Sbjct: 64  IQLYKMRNGYTLSPHAAANFTRKNMADYLRSSTPYFVNLLIAGHDETAGPQLYFLDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
             +    A G GG + LS          +   A E+  KA+   A+I
Sbjct: 124 LNKVPFAAHGYGGFFVLSIFDKYYREDMTKDEAVELLHKAI---AEI 167


>gi|294880655|ref|XP_002769093.1| 20S proteasome subunit beta 7, putative [Perkinsus marinus ATCC
           50983]
 gi|294949219|ref|XP_002786102.1| 20S proteasome subunit beta 7, putative [Perkinsus marinus ATCC
           50983]
 gi|239872228|gb|EER01811.1| 20S proteasome subunit beta 7, putative [Perkinsus marinus ATCC
           50983]
 gi|239900230|gb|EER17898.1| 20S proteasome subunit beta 7, putative [Perkinsus marinus ATCC
           50983]
          Length = 238

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 21/205 (10%)

Query: 4   MGDKHYAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           M  +   ++  +   ++L V+    +++  D   S G +       +V ++G   ++A  
Sbjct: 1   MSGQQRTLQPYVTGASVLAVKYKDGIMMCYDTLASYGSSARFTGVDRVIKVGSNTLVAA- 59

Query: 62  AGSSADAFTLLER---LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---- 114
           +G  +D   L +    LE +     +   R   E A+      Y +  +   L  +    
Sbjct: 60  SGEISDFQYLSDNLQDLENQDWLCDDGTERGPSEWAQYISRIYYQKRGKMDPLYNNVVIG 119

Query: 115 --------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIAR 163
                   +    + T        +  ++A G G   A+   R       S   A E+  
Sbjct: 120 GINKKGSSEEPYYLATVDLYGTFFQEDIVATGFGQHLAIPIMRRKHRNDMSEAEAREMLE 179

Query: 164 KAMSIAADICVYTNHNIVLETLKVG 188
           + M++      Y ++ +   T+   
Sbjct: 180 ECMNVLYYRDCYCSNKVKFATITAE 204


>gi|149751451|ref|XP_001492367.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type 4 [Equus caballus]
          Length = 264

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ DG VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREILEKQPVLSQTEARELVERCMRV 220


>gi|169602118|ref|XP_001794481.1| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
 gi|160706087|gb|EAT89142.2| hypothetical protein SNOG_03937 [Phaeosphaeria nodorum SN15]
          Length = 195

 Score = 72.3 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 49/185 (26%), Gaps = 19/185 (10%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ +    +  N  K+ + G   +  G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGMQALTISNNFPKIFQYGD--VFLGLTGLATDVATVSDLFRYKVN 58

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R+                 R   Y  +     +        +        ++ 
Sbjct: 59  MYRLREERNISPQTMANLVSSSLYEKRFGPYFVSPVIAGINQTTGKPFICGFDSIGCIDF 118

Query: 131 ENGVMAIGSGGSYALSAARALMSTQN-------SAEEIARKAMSIAADICVYTNHNIVLE 183
               +  G+           L               E   +A+  A D    +     + 
Sbjct: 119 AKDFIVSGTASDQLFGTCEGLWEPDLVSSQGPEDLFETISQALLNAVDRDALSGWGAHVY 178

Query: 184 TLKVG 188
            ++  
Sbjct: 179 IIEKD 183


>gi|195568398|ref|XP_002102203.1| GD19625 [Drosophila simulans]
 gi|194198130|gb|EDX11706.1| GD19625 [Drosophila simulans]
          Length = 268

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 17/179 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           +   A     T++L +R D  V++A D  VS G      N  +V ++ K  ++ G +G  
Sbjct: 48  NHSTAFSTTGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKINKNILLGG-SGDF 106

Query: 66  ADAFTLLERLEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIAD-------- 114
           AD  ++   +++K+ +     + +      LA       Y R      L  D        
Sbjct: 107 ADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDN 166

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
           +    +          E+ V+A G     A+   R             A E+ R  M +
Sbjct: 167 EGTPYLANVDLRGRSYEDYVVATGFARHLAIPLVREKKPKDRDFTAVEASELIRTCMEV 225


>gi|212223172|ref|YP_002306408.1| proteasome subunit alpha [Thermococcus onnurineus NA1]
 gi|229598016|sp|B6YSH9|PSA_THEON RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|212008129|gb|ACJ15511.1| Proteasome alpha subunit [Thermococcus onnurineus NA1]
          Length = 260

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 10/162 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T + V+    VV+A + +++  + +  ++  K+ ++      A  G    +      
Sbjct: 35  RGATAVGVKWKEGVVLAVEKRITS-KLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDR 93

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD-KTITLVITGM 124
                +       +      L++   +L +       +R   A +L+A       +    
Sbjct: 94  ARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNDKPELYETD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 E   +AIGSG + A++      S     E   + A+
Sbjct: 154 PSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAI 195


>gi|15678713|ref|NP_275829.1| proteasome subunit alpha [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|6093783|sp|O26782|PSA_METTH RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|2621771|gb|AAB85191.1| proteasome, alpha subunit [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 248

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    +V+  D + +  + V   +  K+ ++ +    A     +     + +
Sbjct: 34  RGTTSLGVKSKEGIVLVVDKRPTS-KLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEK 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM---------ILIADKTITLVITG 123
            RLE ++ +           LAK     K +               I   +     +   
Sbjct: 93  ARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGRGCRLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
                  E    AIG+G   A+       S   +   A E+A  A+  A +    T  ++
Sbjct: 153 DPSGALIEYKATAIGAGRPAAMEEFEKKYSDDMNLNQAIELALDAVYEATE-GKTTPESV 211

Query: 181 VLETLKVGDE 190
            +  ++  D+
Sbjct: 212 EIAVIEAADK 221


>gi|229366882|gb|ACQ58421.1| Proteasome subunit beta type-4 precursor [Anoplopoma fimbria]
          Length = 254

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 15/194 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++    I+      +   
Sbjct: 38  NPM-VTGTSVLGVKFTGGVIIAADMLGSYGSLTRFRNISRLMKVNDNTILGASGDYADYQ 96

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGD 126
                  +  +++       S    A    + +  Y R  +   L     I     G G 
Sbjct: 97  HLKHIIEQMVIDEELLGDGHSYSPKAVHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGEGF 156

Query: 127 VLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICV 174
           +          E   +A G G   A    R ++      T+  A E+  + + +      
Sbjct: 157 LGYVDKLGVAYEAPTVATGFGAYLAQPLMREVLENKVEITKQEARELVERCLKVLYYRDA 216

Query: 175 YTNHNIVLETLKVG 188
            + +   +  +   
Sbjct: 217 RSYNRHEIAIVTEE 230


>gi|300712396|ref|YP_003738210.1| 20S proteasome A and B subunits [Halalkalicoccus jeotgali B3]
 gi|299126079|gb|ADJ16418.1| 20S proteasome A and B subunits [Halalkalicoccus jeotgali B3]
          Length = 179

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 58/175 (33%), Gaps = 5/175 (2%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T++ VR    VV+  D + + G TV   +  K+         A  AG +    T   +L
Sbjct: 2   GTVVGVRLADGVVLGADKRATSGSTVRSESVEKLFEFDGPEAGAVAAGETGAIQTFGRKL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI---TGMGDVLEPEN 132
           +  + Q   +   +           +         ++A +    V           E ++
Sbjct: 62  DTAVRQRGTEQGSTIRIDPLSRLASELANETGVEAVVAARDEEGVARLRAIDSAGGELDD 121

Query: 133 GVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETL 185
            V A GSG  +AL     L      + A E         A+    T  + V+ TL
Sbjct: 122 DVHAQGSGRQFALGQLEGLDRDGSIDGAVEALESVFERIAERDTETGADCVVWTL 176


>gi|196002749|ref|XP_002111242.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
 gi|190587193|gb|EDV27246.1| hypothetical protein TRIADDRAFT_50102 [Trichoplax adhaerens]
          Length = 191

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 57/180 (31%), Gaps = 13/180 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D +  +    +    +++  +     I GF+G + D  T+  +L+ +L 
Sbjct: 1   MTGKNCVAIAADRRFGIQAQTIGHEFQRIYGMSDHLYI-GFSGLATDVTTVSNKLKFRLN 59

Query: 81  QYPNQLLRSS-----VELAKDWRMDKYLRNLEAMILIADKT---ITLVITGMG-DVLEPE 131
            Y  +  R       + L      +K         +IA         V +          
Sbjct: 60  MYMLRENREMKPETFMSLVSSLLYEKRFGPYFVEPVIAGLDKNAKPFVGSLDLIGCPMIT 119

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKVG 188
              +  G+          +L      A+++     +A+  A D    +    ++  ++  
Sbjct: 120 EDFVVSGTASEQLYGMCESLWEPDLEADDLFESISQALLNAVDRDCVSGWGGIVYVIEKD 179


>gi|314923532|gb|EFS87363.1| proteasome, beta subunit [Propionibacterium acnes HL001PA1]
 gi|314966579|gb|EFT10678.1| proteasome, beta subunit [Propionibacterium acnes HL082PA2]
 gi|315092900|gb|EFT64876.1| proteasome, beta subunit [Propionibacterium acnes HL060PA1]
 gi|315103578|gb|EFT75554.1| proteasome, beta subunit [Propionibacterium acnes HL050PA2]
 gi|327327401|gb|EGE69177.1| proteasome, beta subunit [Propionibacterium acnes HL103PA1]
          Length = 278

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 27/177 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAF 69
           H  T+L +R +G VV+A D    LG  + +     +  ++       +I   AG++  A 
Sbjct: 49  HGRTVLAIRYNGGVVVAAD----LGSALARRLGQTDVDRILGTDDRCVIG-VAGAAGLAG 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------- 120
            ++   + +++       +      +  R+   +R+   M+        L+         
Sbjct: 104 EMIRLFQAEVDHLEKIQGQRISMDGRAVRLSSLVRSHGTMMAQGLAVTPLLAGWDELAHR 163

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                  G G   E E+    +GSG  +A         T    +E   +A +A+  A
Sbjct: 164 GRIFSYDGTGGQTE-EHSHACVGSGALFASDVLNEGYRTGMDRDESVALAIRALDTA 219


>gi|255083731|ref|XP_002508440.1| predicted protein [Micromonas sp. RCC299]
 gi|226523717|gb|ACO69698.1| predicted protein [Micromonas sp. RCC299]
          Length = 207

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 50/165 (30%), Gaps = 13/165 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVS-LGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             +  +   I+ +     V IA D +     Q     + +K+ ++     + G +G + D
Sbjct: 2   SIMSYNGAAIIAMCGKECVAIASDLRFGINQQQTTAVDMKKIYKIHDHLYV-GLSGLATD 60

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-- 125
             TL +R + +   Y  +  R          +   L         A+  +  +    G  
Sbjct: 61  QATLAQRFKFRHNMYELRESRKMRPETFANLVSTMLYEKRFGPYYAEPIVAGLDATNGYK 120

Query: 126 ---------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                      + P +  +  G+          ++       EE+
Sbjct: 121 PFITGMDLIGAMAPTDNFVVCGNNEESLFGVCESMYKPDLEPEEL 165


>gi|327286564|ref|XP_003228000.1| PREDICTED: proteasome subunit beta type-4-like [Anolis
           carolinensis]
          Length = 271

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 17/175 (9%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++    ++ G +G  AD 
Sbjct: 55  SPM-VTGTSVLGVKFKGGVIIAADMLGSYGSLARFRNISRIMKVNDTTVL-GASGDYADF 112

Query: 69  FTLLERLEKKL---------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-KTIT 118
             L + +E+ +           Y  + + S +  A   R  K       +++       +
Sbjct: 113 QYLKQVVEQMVIDEELLGDGHSYSPKAIHSWLTRAMYNRRSKMNPLWNTVVIGGYAGGES 172

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
            +       +  E   +A G G   A    R  +      TQ  A  +  + M I
Sbjct: 173 FLGYVDMLGVAYEAPSLATGYGSYVAQPLMRDAIEKKPSLTQEDARALIERCMKI 227


>gi|312067975|ref|XP_003136996.1| proteasome subunit beta type 3 [Loa loa]
 gi|307767836|gb|EFO27070.1| proteasome subunit beta type 3 [Loa loa]
          Length = 192

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 64/181 (35%), Gaps = 14/181 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +  +  V IA D ++    T +  N +KV +LG+  +  G  G  +DA T+L+++  +  
Sbjct: 1   MAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGE-KVYIGLGGFHSDAKTVLDKITFRKN 59

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITLVITGMG-DVLEP 130
            Y  +  R          +   L          +              +        +  
Sbjct: 60  LYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPYICAMDTIGCISA 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
            N  +A+G+G  Y L           +++E+     ++M  A +    +   +++ T+  
Sbjct: 120 PNDFVAVGTGTEYLLGVCEGFWKEGMNSDELFEATAQSMLSAMERDAASGWGVIVYTITK 179

Query: 188 G 188
            
Sbjct: 180 D 180


>gi|115923339|ref|XP_001177443.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115953853|ref|XP_001183744.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 255

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 62/180 (34%), Gaps = 17/180 (9%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T+ L ++ +G V++A D   S G      N  +V ++    ++ G AG  AD 
Sbjct: 39  NPM-VTGTSTLGMKFNGGVILAADMLGSYGSLARFRNISRVTKVNDNTVLTG-AGDYADF 96

Query: 69  FTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTIT 118
             + E L++K ++        S    A    + + +              ++       +
Sbjct: 97  QYVSELLDQKIIDDECLNDGHSFTPKALFSWLTRIMYNRRSKFNPIWNTMVLGGFQNGES 156

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADIC 173
            +       +  E+  +A G G   AL   R         T+  A  +  + + +     
Sbjct: 157 FLGYVDKIGVAYESPHVACGYGAYIALPMMRDAHEKNSNMTEQEARAVVERCLKVLFYRD 216


>gi|296805317|ref|XP_002843483.1| proteasome component Pre4 [Arthroderma otae CBS 113480]
 gi|238844785|gb|EEQ34447.1| proteasome component Pre4 [Arthroderma otae CBS 113480]
          Length = 266

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 67/217 (30%), Gaps = 32/217 (14%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQ-----VSLGQTVMKANARKVRRLGKGNII 58
           M      + +  T+++ V+    VVIA D        S G      + +++R     +++
Sbjct: 30  MTHTQRPI-VTGTSVIAVKFKDGVVIAADNLGSPAPASYGSLARFTDVKRLRAFDNSSVV 88

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA- 113
            GF G  +D   +   L     Q            AK+         Y R  +   L   
Sbjct: 89  -GFGGDVSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYKRRSDFDPLWNH 147

Query: 114 -------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI----A 162
                   +    + +            +A G G   A+   R L   ++  E I    A
Sbjct: 148 ILVAGLDGEGKPFLSSADLLGTTYSAPSLATGFGAHLAIPILRRLFPEEDGIENITKEQA 207

Query: 163 RKAMS---------IAADICVYTNHNIVLETLKVGDE 190
             AM           A     Y+   +  E +++ ++
Sbjct: 208 IDAMKQCMKVLFYRDARSSDRYSIAVVTKEGVELKED 244


>gi|50554559|ref|XP_504688.1| YALI0E32505p [Yarrowia lipolytica]
 gi|49650557|emb|CAG80292.1| YALI0E32505p [Yarrowia lipolytica]
          Length = 265

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 71/207 (34%), Gaps = 32/207 (15%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ ++ D  V++A D   S G      N  ++ ++G  + I G  G  +D   +   
Sbjct: 44  GSSVIGIKFDKGVIVAADTLASYGSLARFDNMDRLTQVGD-STIVGIGGDVSDMQYVQRL 102

Query: 75  LEKKLEQYPNQLLRSSVELAKD----------WRMDKYLRNLEAMILIA--DKTITLVIT 122
           LE+   +            +++           R  K      A+++     K    +  
Sbjct: 103 LEELEIEENYDNSGDQSLHSENIFNYLSKVYYNRRSKMDPLWNAVLVGGVDSKDEPFLSH 162

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARAL------MS--TQNSAEEIARKAMSI-----A 169
                +   +  +A G G   AL   R L          T+  A  +  K M +     A
Sbjct: 163 VDLLGVTFSSPALATGFGAYLALPLLRQLVPYPDSYKNVTEADARAMVEKCMKVLFYRDA 222

Query: 170 ADICVY-----TNHNIVLET-LKVGDE 190
             I  Y     T  N+ +E  +K  D+
Sbjct: 223 RSIDKYDVATITKGNVKIEKDIKCKDQ 249


>gi|304314833|ref|YP_003849980.1| proteasome, subunit alpha [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588292|gb|ADL58667.1| predicted proteasome, subunit alpha [Methanothermobacter
           marburgensis str. Marburg]
          Length = 248

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    +V+  D + +  + V   +  K+ ++ +    A     +     + +
Sbjct: 34  RGTTSLGVKSKEGIVLVVDKRPTS-KLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEK 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM---------ILIADKTITLVITG 123
            RLE ++ +           LAK     K +               I   +     +   
Sbjct: 93  ARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGKGCRLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
                  E    AIG+G   A+       +   +   A E+A  A+  A +    T  ++
Sbjct: 153 DPSGALIEYKATAIGAGRPAAMEEFEKKYTDDMNLNQAIELALDAVYEATE-GKTTPESV 211

Query: 181 VLETLKVGDE 190
            +  ++  D+
Sbjct: 212 EIAVIEAADK 221


>gi|225705938|gb|ACO08815.1| Proteasome subunit beta type 6 precursor [Oncorhynchus mykiss]
          Length = 184

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 57/178 (32%), Gaps = 31/178 (17%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 16  GTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
             + ++  +  Q+    +  A    + +   N +  +     T                 
Sbjct: 75  AAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFIT----------------- 117

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKVG 188
                    Y    A A      S EE    A  A+++A      +     L  +   
Sbjct: 118 ---------YIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVITEE 166


>gi|260820385|ref|XP_002605515.1| hypothetical protein BRAFLDRAFT_286692 [Branchiostoma floridae]
 gi|229290849|gb|EEN61525.1| hypothetical protein BRAFLDRAFT_286692 [Branchiostoma floridae]
          Length = 258

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 62/179 (34%), Gaps = 17/179 (9%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
            + M  T++L V+ DG VV+A D   S G      N  +V ++    ++AG AG  AD  
Sbjct: 43  PMTM-GTSVLGVKFDGGVVVAADMLGSYGSLARYRNISRVMKVNNTTVLAG-AGDYADYQ 100

Query: 70  TLLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITL 119
            L E L++K+   E   +    S   +        Y R      L         +     
Sbjct: 101 FLKEVLDQKIIDDELLGDGHSFSPKAIFSWLTRVMYNRRTRFNPLWNQVVIGGFNNGEPF 160

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNS---AEEIARKAMSIAADIC 173
           +       +  E   +A G G   A    R  +      S   A E+  + + +     
Sbjct: 161 LGYVDKIGVAYEAPTIATGMGAYMAQPLLRDALEKKPNMSQSEALELLERCLKVLFYRD 219


>gi|183637593|gb|ACC64595.1| proteasome subunit beta type-4 precursor (predicted) [Rhinolophus
           ferrumequinum]
          Length = 261

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 17/178 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T++L V+ DG VVIA D   S G      N  ++ R+    ++ G +G  
Sbjct: 45  HTQNPM-VTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNNTTML-GASGDY 102

Query: 66  ADAFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT 116
           AD   L + L      E+ L    +   R+       A   R  K       M++     
Sbjct: 103 ADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYSD 162

Query: 117 -ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
             + +       +  E   +A G G   A    R  +       Q  A E+  + M +
Sbjct: 163 GESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLRETLEKQPVLNQTEARELVERCMRV 220


>gi|55742410|ref|NP_001007179.1| proteasome subunit beta type-11 [Danio rerio]
 gi|169146057|emb|CAQ14650.1| novel protein similar to proteasomes [Danio rerio]
          Length = 375

 Score = 71.9 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 1/109 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L       V+ A D + S    V      K+  +    ++   +GS AD      
Sbjct: 76  HGTTTLGFIFQDGVIAAADTRASCKGLVCCPITHKIMPIHSHLVVNT-SGSGADCMLWER 134

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
            L +++  Y  +             +   L   +   +    T+     
Sbjct: 135 ILTREMRLYQLRHRTRLSINGAAKLLSTMLHPFKGTNVCVAATLCGWDG 183



 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 112 IADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
              +    V     D L+    ++++GSG  YA +          + +E   +AR+A+  
Sbjct: 245 FGGRFGPRVCYVCSDGLQLNGEIISVGSGSPYAYAVLDDGWRWGMTVDEAVGLAREAVFR 304

Query: 169 AADICVYTNHNIVL 182
           A     Y+ +N+ L
Sbjct: 305 ATHWDAYSGNNVDL 318


>gi|121604685|ref|YP_982014.1| 20S proteasome subunits A/B [Polaromonas naphthalenivorans CJ2]
 gi|120593654|gb|ABM37093.1| 20S proteasome, A and B subunits [Polaromonas naphthalenivorans
           CJ2]
          Length = 196

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 73/195 (37%), Gaps = 25/195 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-----KGNIIAGFAGSSADAFT 70
           TT++ V+K G V IA D  V+ G T +        ++       G  + G AG+ A    
Sbjct: 2   TTLVVVKKAGQVAIAADTLVTFGDTCLTQRFEANSKIFKVETPDGESLIGMAGTVAHFPV 61

Query: 71  LL-----------------ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
           L                  E  +  L+ +P  L  S    +K+   D Y  +   +++  
Sbjct: 62  LRKAMATLPKEQLKLGSREEVFDTFLKLHPL-LKESFFLQSKEDDNDPYESSQFTVLIAN 120

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
              I  + +     +        +GSG S+AL A  A      +A E+A   ++   +  
Sbjct: 121 ASGIYGLYS--YREVFEFKEFWGVGSGRSFALGAMHASWGKARTAREVAMAGLNAGCEFD 178

Query: 174 VYTNHNIVLETLKVG 188
             +   I + TLK+ 
Sbjct: 179 KNSGGPIDVFTLKLK 193


>gi|145347123|ref|XP_001418027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578255|gb|ABO96320.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 289

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 13/171 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+ L ++    V++A D     G T    N  +V+++ +   IA F G  +D   +   
Sbjct: 73  GTSALGLKYGDGVLLACDTLACYGSTKRYKNVERVKKVNERCAIA-FTGELSDFTYVCNL 131

Query: 75  LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITG 123
           LE+   +     + + R + E+ +      Y R  +   L              T + T 
Sbjct: 132 LEELTTEDFCEDDGMTRDAEEIYQYLTRVMYNRRNKFDPLWNSLVVAGLKTNGETFLGTV 191

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
                  E+  +  G G   A    R       + E+ A + M  A   CV
Sbjct: 192 GMIGTHYEDDHVCAGFGNHIARPIFREFYKADMTEEQ-AVEVMRSALYACV 241


>gi|332020294|gb|EGI60725.1| Proteasome subunit beta type-4 [Acromyrmex echinatior]
          Length = 252

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 52/165 (31%), Gaps = 12/165 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               +    T+++ ++ +  VVI+ D   S G      N  ++ ++    I+      + 
Sbjct: 38  SQSPI-TTGTSVIGIQFNDGVVISADILGSYGSLARYRNLERLMKVNDNIILGASGDYAD 96

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKD--------WRMDKYLRNLEAMILIADKT-I 117
                    +K LE+       S    A           R   +       ++   +   
Sbjct: 97  FQCIKSYVEKKILEEQCLDDGFSLKPKALHCWLTRVMYNRRSNFDPFWNNFVIAGLEDGQ 156

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEE 160
             + T        ++ V+A G G   A    R     ++Q S E+
Sbjct: 157 PFLATVDKLGTAYKDPVIATGYGAYMATPILRKAYEENSQMSKED 201


>gi|323302827|gb|EGA56632.1| Pre10p [Saccharomyces cerevisiae FostersB]
          Length = 247

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + TT + ++ +  VV A +  ++    V + N +   ++   +I   ++G   D   L+ 
Sbjct: 33  NGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKI--QVVDRHIGCVYSGLIPDGRHLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++   +           A   R+ +Y+             +  +    DK    +  
Sbjct: 91  RGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSI 168
                        A G G   A +    L+       SA E  ++A  I
Sbjct: 151 LEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKI 199


>gi|3114275|pdb|1RYP|G Chain G, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114289|pdb|1RYP|U Chain U, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513418|pdb|1G65|F Chain F, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513432|pdb|1G65|T Chain T, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|20150382|pdb|1JD2|F Chain F, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150403|pdb|1JD2|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|93279373|pdb|2F16|F Chain F, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279387|pdb|2F16|T Chain T, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279661|pdb|2FNY|F Chain F, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279675|pdb|2FNY|T Chain T, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032207|pdb|2FAK|F Chain F, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032221|pdb|2FAK|T Chain T, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490848|pdb|2GPL|F Chain F, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490862|pdb|2GPL|T Chain T, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016372|pdb|3D29|F Chain F, Proteasome Inhibition By Fellutamide B
 gi|190016386|pdb|3D29|T Chain T, Proteasome Inhibition By Fellutamide B
 gi|197725326|pdb|3E47|F Chain F, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725340|pdb|3E47|T Chain T, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939217|pdb|3DY3|F Chain F, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939231|pdb|3DY3|T Chain T, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939245|pdb|3DY4|F Chain F, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939259|pdb|3DY4|T Chain T, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828242|pdb|3GPJ|F Chain F, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828256|pdb|3GPJ|T Chain T, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588326|pdb|3GPT|F Chain F, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588340|pdb|3GPT|T Chain T, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588354|pdb|3GPW|F Chain F, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588368|pdb|3GPW|T Chain T, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588548|pdb|3HYE|F Chain F, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588562|pdb|3HYE|T Chain T, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|298508228|pdb|1VSY|G Chain G, Proteasome Activator Complex
 gi|298508242|pdb|1VSY|U Chain U, Proteasome Activator Complex
 gi|298508444|pdb|3L5Q|L Chain L, Proteasome Activator Complex
 gi|298508458|pdb|3L5Q|X Chain X, Proteasome Activator Complex
 gi|330689386|pdb|3MG4|F Chain F, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689400|pdb|3MG4|T Chain T, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 244

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + TT + ++ +  VV A +  ++    V + N +   ++   +I   ++G   D   L+ 
Sbjct: 29  NGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKI--QVVDRHIGCVYSGLIPDGRHLVN 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++   +           A   R+ +Y+             +  +    DK    +  
Sbjct: 87  RGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYM 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSI 168
                        A G G   A +    L+       SA E  ++A  I
Sbjct: 147 LEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKI 195


>gi|282853839|ref|ZP_06263176.1| proteasome, beta subunit [Propionibacterium acnes J139]
 gi|282583292|gb|EFB88672.1| proteasome, beta subunit [Propionibacterium acnes J139]
 gi|314981503|gb|EFT25597.1| proteasome, beta subunit [Propionibacterium acnes HL110PA3]
 gi|315092166|gb|EFT64142.1| proteasome, beta subunit [Propionibacterium acnes HL110PA4]
          Length = 278

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 27/177 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAF 69
           H  T+L +R +G VV+A D    LG  + +     +  ++       +I   AG++  A 
Sbjct: 49  HGRTVLAIRYNGGVVVAAD----LGSALARRLGQTDVDRILGTDDRCVIG-VAGAAGVAG 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------- 120
            ++   + +++       +      +  R+   +R+   M+        L+         
Sbjct: 104 EMIRLFQAEVDHLEKIQGQRISMDGRAVRLSSLVRSHGTMMTQGLAVTPLLAGWDESAHR 163

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                  G G   E E+    +GSG  +A         T    +E   +A +A+  A
Sbjct: 164 GRIFSYDGTGGQTE-EHSHACVGSGALFASDVLNEGYRTGMDRDESVALAIRALDAA 219


>gi|327330441|gb|EGE72190.1| proteasome, beta subunit [Propionibacterium acnes HL097PA1]
          Length = 278

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 27/177 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAF 69
           H  T+L +R +G VV+A D    LG  + +     +  ++       +I   AG++  A 
Sbjct: 49  HGRTVLAIRYNGGVVVAAD----LGSALARRLGQTDVDRILGTDDRCVIG-VAGAAGLAG 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------- 120
            ++   + + +       +         R+   +R+   M+        L+         
Sbjct: 104 EMIRLFQAEADHLEKIQGQRISMDGCAVRLSSLVRSHGTMMAQGLAVTPLLAGWDELAHR 163

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                  G G   E E+    +GSG  +A         T    +E   +A +A+  A
Sbjct: 164 VRIFSYDGTGGQTE-EHSHACVGSGALFASDVLNKGYRTGMDRDESVALAIRALDTA 219


>gi|225556132|gb|EEH04422.1| proteasome component [Ajellomyces capsulatus G186AR]
          Length = 216

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/198 (10%), Positives = 51/198 (25%), Gaps = 29/198 (14%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 1   MAINFKDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVSYH 59

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------------ 120
           L  Y                  +   + + ++     +   +                  
Sbjct: 60  LGMYGVVNQERPTTQTAAALFQELCYDNKDILRQGIPSRPRLLHQLLSYIIAGIIIAGYD 119

Query: 121 -------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAA 170
                   +        +      GSG +Y      A      + E   E  + ++  A 
Sbjct: 120 ARHGGQVYSIPLGGSLHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQEAI 179

Query: 171 DICVYTNHNIVLETLKVG 188
                +   I +  L   
Sbjct: 180 KWDGSSGGVIRMVVLTEK 197


>gi|74140105|dbj|BAE33781.1| unnamed protein product [Mus musculus]
          Length = 264

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ DG VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|58257385|gb|AAW69314.1| proteasome subunit beta-like protein [Magnaporthe grisea]
          Length = 269

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 63/202 (31%), Gaps = 29/202 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VVIA D   S G     ++  ++R     +++ GF G  +D   L   
Sbjct: 40  GTSVVGLKFKDGVVIAADNLASYGSLARFSSTHRLRSFANSSVV-GFGGDVSDMQYLDRH 98

Query: 75  LEK------------KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--------D 114
           L +            +  +       ++  L K      Y R  +   L           
Sbjct: 99  LNELAIDEAYANPADESTESSRDSSLNAQNLHKYLSKLLYGRRNKFDPLWNQILVAGLDP 158

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI--------ARKAM 166
                + +            +A G G   A+   R  + ++  A ++         ++ M
Sbjct: 159 DDKPFLASADLLGTTFSAPALASGYGSMLAIPIMRRAVPSEEEAAKLSREEAVAVVKECM 218

Query: 167 SIAADICVYTNHNIVLETLKVG 188
            +       ++ +  L  +   
Sbjct: 219 KVLFYRDARSSDSYSLAVVTKE 240


>gi|224284230|gb|ACN39851.1| unknown [Picea sitchensis]
          Length = 262

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 12/169 (7%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
               Y   +  T++L ++    V++A D   S G T+   + ++++ +GK  ++ G  G 
Sbjct: 38  SHTQYPY-VTGTSVLGIKYKDGVLLASDMGGSYGSTLRYKSVQRLKPIGKHTLL-GAGGE 95

Query: 65  SADAFTLLERL-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILI-------AD 114
            +D   ++  L E  L         S         +++  Y R  +   L          
Sbjct: 96  ISDFQEIVRYLDELILYDNMWDDGNSLGPKEVHNYLNRLMYNRRNKFNPLWNTLVLGGVK 155

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                + T     +  E   +A G G   A    R       + EE  +
Sbjct: 156 NGQKYLGTVNMIGVHYEENHVATGFGNHLARPIFRDEWHEDMTFEEGVK 204


>gi|212276161|ref|NP_001130703.1| hypothetical protein LOC100191806 [Zea mays]
 gi|194689886|gb|ACF79027.1| unknown [Zea mays]
          Length = 155

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 1/97 (1%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  +G VV+  D + S G  V    + K+ +L     +   +GS+AD   + + 
Sbjct: 23  GTTIVGVCYEGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVC-RSGSAADTQVISDY 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL 111
           +   L Q+  QL + +        +       +   +
Sbjct: 82  VRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKVCSI 118


>gi|14198355|gb|AAH08241.1| Proteasome (prosome, macropain) subunit, beta type 4 [Mus musculus]
          Length = 264

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ DG VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|116779331|gb|ABK21241.1| unknown [Picea sitchensis]
 gi|116786508|gb|ABK24134.1| unknown [Picea sitchensis]
 gi|224284030|gb|ACN39753.1| unknown [Picea sitchensis]
          Length = 262

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 12/169 (7%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
               Y   +  T++L ++    V++A D   S G T+   + ++++ +GK  ++ G  G 
Sbjct: 38  SHTQYPY-VTGTSVLGIKYKDGVLLASDMGGSYGSTLRYKSVQRLKPIGKHTLL-GAGGE 95

Query: 65  SADAFTLLERL-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILI-------AD 114
            +D   ++  L E  L         S         +++  Y R  +   L          
Sbjct: 96  ISDFQEIVRYLDELILYDNMWDDGNSLGPKEVHNYLNRLMYNRRNKFNPLWNTLVLGGVK 155

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                + T     +  E   +A G G   A    R       + EE  +
Sbjct: 156 NGQKYLGTVNMIGVHYEENHVATGFGNHLARPIFRDEWHEDMTFEEGVK 204


>gi|11513997|pdb|1G0U|F Chain F, A Gated Channel Into The Proteasome Core Particle
 gi|11514011|pdb|1G0U|T Chain T, A Gated Channel Into The Proteasome Core Particle
          Length = 248

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + TT + ++ +  VV A +  ++    V + N +   ++   +I   ++G   D   L+ 
Sbjct: 33  NGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKI--QVVDRHIGCVYSGLIPDGRHLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++   +           A   R+ +Y+             +  +    DK    +  
Sbjct: 91  RGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSI 168
                        A G G   A +    L+       SA E  ++A  I
Sbjct: 151 LEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKI 199


>gi|26346308|dbj|BAC36805.1| unnamed protein product [Mus musculus]
          Length = 264

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ DG VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|190345063|gb|EDK36881.2| hypothetical protein PGUG_00979 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 273

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 23/206 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T++ +++    V++A D   S G  +   N  ++ ++GK  ++ G +G 
Sbjct: 41  MNSQQPI-ITGTSVNSIKFKDGVIVAADNMGSYGSLLRFNNIERIFKVGKETVV-GVSGD 98

Query: 65  SADAFTLLERL------EKKLEQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA 113
            +D   +   L      E+  +      LR+             R  K      A+++  
Sbjct: 99  ISDFQQIQRLLDELEITEEIYDNDGGHNLRAPNVHEYLTRVLYNRRSKMDPLWNAVVVAG 158

Query: 114 --DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEIAR 163
             D     +       +   +  +  G G   A+   R L+             A E   
Sbjct: 159 FNDDKTPFLRYVDLLGVTYGSSAICTGFGAHLAIPLLRQLVPDDKDYQNVTEEQAREAII 218

Query: 164 KAMSIAADICVYTNHNIVLETLKVGD 189
             M +       ++    L TLK G 
Sbjct: 219 NCMKVLFYRDARSSDKFTLVTLKQGQ 244


>gi|115905724|ref|XP_795143.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 215

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 54/173 (31%), Gaps = 14/173 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+ L ++ +G V++A D   S G      N  +V ++    ++ G    +   F     
Sbjct: 4   GTSTLGMKFNGGVILAADMLGSYGSLARFRNISRVTKVNDNTVLTGAGDYADFQFVSELL 63

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTITLVITGMG 125
            +K ++        S    A    + + +              ++       + +     
Sbjct: 64  DQKIIDDECLNDGHSFTPKALFSWLTRIMYNRRSKFNPIWNTMVLGGFQNGESFLGYVDK 123

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADIC 173
             +  E+  +A G G   AL   R         T+  A  +  + + +     
Sbjct: 124 IGVAYESPHVACGYGAYIALPMMRDAHEKNSNMTEQEARAVVERCLKVLFYRD 176


>gi|313838914|gb|EFS76628.1| proteasome, beta subunit [Propionibacterium acnes HL086PA1]
          Length = 278

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 27/177 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAF 69
           H  T+L +R +G VV+A D    LG  + +     +  ++       +I   AG++  A 
Sbjct: 49  HGRTVLAIRYNGGVVVAAD----LGSALARRLGQTDVDRILGTDDRCVIG-VAGAAGLAG 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------- 120
            ++   + +++       +         R+   +R+   M+        L+         
Sbjct: 104 EMIRLFQAEVDHLEKIQGQRISMDGCAVRLSSLVRSHGTMMAQGLAVTPLLAGWGELAHR 163

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                  G G   E E+    +GSG  +A         T    +E   +A +A+  A
Sbjct: 164 GRVFSYDGTGGQTE-EHSHACVGSGALFASDVLNEDYRTGMDRDESVALAIRALDTA 219


>gi|284005520|ref|NP_001164776.1| proteasome subunit beta type-4 [Oryctolagus cuniculus]
 gi|217030858|gb|ACJ74020.1| proteasome subunit beta type-4 (predicted) [Oryctolagus cuniculus]
          Length = 261

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ DG VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQAEARELVERCMRV 220


>gi|254540082|ref|NP_032971.2| proteasome subunit beta type-4 precursor [Mus musculus]
 gi|3914439|sp|P99026|PSB4_MOUSE RecName: Full=Proteasome subunit beta type-4; Short=Proteasome beta
           chain; AltName: Full=Low molecular mass protein 3;
           AltName: Full=Macropain beta chain; AltName:
           Full=Multicatalytic endopeptidase complex beta chain;
           AltName: Full=Proteasome chain 3; Flags: Precursor
 gi|1762779|gb|AAC53263.1| beta proteasome subunit [Mus musculus]
 gi|74212238|dbj|BAE40277.1| unnamed protein product [Mus musculus]
 gi|148706807|gb|EDL38754.1| proteasome (prosome, macropain) subunit, beta type 4 [Mus musculus]
          Length = 264

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ DG VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|225712004|gb|ACO11848.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
 gi|290462585|gb|ADD24340.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
 gi|290561585|gb|ADD38192.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
          Length = 242

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 59/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    +V+A + +++    +  +   K+ ++ K    A F+G   D+  L+++
Sbjct: 34  GSTAIGIQTKDGIVLAVEKRITS-SLMEPSTIEKIVQIDKHLACA-FSGLIPDSKMLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKTIT 118
              + + +           +    +                      +  ++   D+   
Sbjct: 92  ARVECQNHWFNYSEKMRIESVAQAVSNLAIQFGDSEVKGAALSRPFGVALLLAGMDERGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A  + +    +  S +E  +++M+I
Sbjct: 152 QLYHMDPSGTYIRFDAKAIGSGSEGAQQSLQEKYHSSMSMDEAIKESMTI 201


>gi|314917884|gb|EFS81715.1| proteasome, beta subunit [Propionibacterium acnes HL050PA1]
          Length = 278

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 27/177 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAF 69
           H  T+L +R +G VV+A D    LG  + +     +  ++       +I   AG++  A 
Sbjct: 49  HGRTVLAIRYNGGVVVAAD----LGSALARRLGQTDVDRILGTDDRCVIG-VAGAAGLAG 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------- 120
            ++   + +++       +         R+   +R+   M+        L+         
Sbjct: 104 EMIRLFQAEVDHLEKIQGQRISMDGCAVRLSSLVRSHGTMMAQGLAVTPLLAGWGELAHR 163

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                  G G   E E+    +GSG  +A         T    +E   +A +A+  A
Sbjct: 164 GRIFSYDGTGGQTE-EHSHACVGSGALFASDVLNEDYRTGMDRDESVALAIRALDTA 219


>gi|237840493|ref|XP_002369544.1| proteasome subunit beta type 2, putative [Toxoplasma gondii ME49]
 gi|211967208|gb|EEB02404.1| proteasome subunit beta type 2, putative [Toxoplasma gondii ME49]
 gi|221483239|gb|EEE21563.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
 gi|221504161|gb|EEE29838.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
          Length = 191

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 14/165 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ +R     ++A D   +     MK +  K+  +    +  GFAG   D     + ++
Sbjct: 3   TVIGIRGRDFALVACDRYANSSILRMKDDEDKLLLVDDDKV-MGFAGQIGDRLQFGDYIQ 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADKTITLVITGMGDVL 128
           K +  Y  +  +     A      + L         +++ M+   D+    +        
Sbjct: 62  KNIHLYRFRNNKKLGCAAAANFTRQQLAYYLRRSPYHVDVMLAGYDEMGPHLYWMDYLAS 121

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                  A G    +           + + EE    A+ I  ++C
Sbjct: 122 MVSVNKAAHGYAAYFLGGLLDRYYHPELTEEE----ALKI-IEMC 161


>gi|313818741|gb|EFS56455.1| proteasome, beta subunit [Propionibacterium acnes HL046PA2]
 gi|313820511|gb|EFS58225.1| proteasome, beta subunit [Propionibacterium acnes HL036PA1]
 gi|313822683|gb|EFS60397.1| proteasome, beta subunit [Propionibacterium acnes HL036PA2]
 gi|314924991|gb|EFS88822.1| proteasome, beta subunit [Propionibacterium acnes HL036PA3]
 gi|314960342|gb|EFT04444.1| proteasome, beta subunit [Propionibacterium acnes HL002PA2]
 gi|315085468|gb|EFT57444.1| proteasome, beta subunit [Propionibacterium acnes HL002PA3]
          Length = 278

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 27/177 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAF 69
           H  T+L +R +G VV+A D    LG  + +     +  ++       +I   AG++  A 
Sbjct: 49  HGRTVLAIRYNGGVVVAAD----LGSALARRLGQTDVDRILGTDDRCVIG-VAGAAGLAG 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------- 120
            ++   + +++       +         R+   +R+   M+        L+         
Sbjct: 104 EMIRLFQAEVDHLEKIQGQRISMDGCAVRLSSLVRSHGTMMAQGLAVTPLLAGWDELAHR 163

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                  G G   E E+    +GSG  +A         T    +E   +A +A+  A
Sbjct: 164 GRIFSYDGTGGQTE-EHSHACVGSGALFASDVLNEDYRTGMDRDESVALAIRALDTA 219


>gi|134046449|ref|YP_001097934.1| proteasome subunit alpha [Methanococcus maripaludis C5]
 gi|166199285|sp|A4FZT6|PSA_METM5 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|132664074|gb|ABO35720.1| proteasome subunit alpha 4 [Methanococcus maripaludis C5]
          Length = 259

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 11/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+A D +++  + +  ++  K+ ++    + A     +     +  
Sbjct: 35  RGTTAVGIKCKDGVVLAVDRRITS-KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDR 93

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            RLE ++ +       +   LAK     K                +I   D+    +   
Sbjct: 94  ARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  E    AIGSG   A+    +  S   +  E    A+  
Sbjct: 154 DPSGALIEYKATAIGSGRPIAMEVLESKYSEDMTVNEGMELALYA 198


>gi|45184842|ref|NP_982560.1| AAR019Wp [Ashbya gossypii ATCC 10895]
 gi|44980451|gb|AAS50384.1| AAR019Wp [Ashbya gossypii ATCC 10895]
          Length = 195

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 12/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R    V++A    V+ G +V+KA+  K R+L   + +  F+G   DA    E ++ 
Sbjct: 4   ILGIRVQDSVILATSKAVTRGISVLKADDDKTRQLSPHS-LMSFSGEPGDAVQFSEYIQA 62

Query: 78  KLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIAD-------KTITLVITGMGD 126
            ++ Y  +        A+       + K LR+ +   +               +      
Sbjct: 63  NMQLYMIRENYELSPQAQASYVRSELAKSLRSRKPFQVNVLIGGYDTRAEKPELYQIDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             + E    A G  G Y  S          + EE
Sbjct: 123 GTKVELPYAAHGYSGFYTFSLLDHHYRPDMTTEE 156


>gi|50842686|ref|YP_055913.1| 20S proteasome beta-subunit precursor [Propionibacterium acnes
           KPA171202]
 gi|289425080|ref|ZP_06426857.1| proteasome, beta subunit [Propionibacterium acnes SK187]
 gi|289428513|ref|ZP_06430197.1| proteasome, beta subunit [Propionibacterium acnes J165]
 gi|295130766|ref|YP_003581429.1| proteasome, beta subunit [Propionibacterium acnes SK137]
 gi|50840288|gb|AAT82955.1| 20S proteasome beta-subunit precursor [Propionibacterium acnes
           KPA171202]
 gi|289154058|gb|EFD02746.1| proteasome, beta subunit [Propionibacterium acnes SK187]
 gi|289158207|gb|EFD06426.1| proteasome, beta subunit [Propionibacterium acnes J165]
 gi|291377283|gb|ADE01138.1| proteasome, beta subunit [Propionibacterium acnes SK137]
 gi|313764271|gb|EFS35635.1| proteasome, beta subunit [Propionibacterium acnes HL013PA1]
 gi|313772011|gb|EFS37977.1| proteasome, beta subunit [Propionibacterium acnes HL074PA1]
 gi|313791957|gb|EFS40058.1| proteasome, beta subunit [Propionibacterium acnes HL110PA1]
 gi|313801560|gb|EFS42800.1| proteasome, beta subunit [Propionibacterium acnes HL110PA2]
 gi|313807704|gb|EFS46191.1| proteasome, beta subunit [Propionibacterium acnes HL087PA2]
 gi|313810211|gb|EFS47932.1| proteasome, beta subunit [Propionibacterium acnes HL083PA1]
 gi|313812761|gb|EFS50475.1| proteasome, beta subunit [Propionibacterium acnes HL025PA1]
 gi|313816362|gb|EFS54076.1| proteasome, beta subunit [Propionibacterium acnes HL059PA1]
 gi|313825384|gb|EFS63098.1| proteasome, beta subunit [Propionibacterium acnes HL063PA1]
 gi|313827348|gb|EFS65062.1| proteasome, beta subunit [Propionibacterium acnes HL063PA2]
 gi|313830542|gb|EFS68256.1| proteasome, beta subunit [Propionibacterium acnes HL007PA1]
 gi|313833578|gb|EFS71292.1| proteasome, beta subunit [Propionibacterium acnes HL056PA1]
 gi|314915748|gb|EFS79579.1| proteasome, beta subunit [Propionibacterium acnes HL005PA4]
 gi|314920266|gb|EFS84097.1| proteasome, beta subunit [Propionibacterium acnes HL050PA3]
 gi|314931486|gb|EFS95317.1| proteasome, beta subunit [Propionibacterium acnes HL067PA1]
 gi|314957871|gb|EFT01974.1| proteasome, beta subunit [Propionibacterium acnes HL002PA1]
 gi|314962613|gb|EFT06713.1| proteasome, beta subunit [Propionibacterium acnes HL082PA1]
 gi|314967522|gb|EFT11621.1| proteasome, beta subunit [Propionibacterium acnes HL037PA1]
 gi|314973542|gb|EFT17638.1| proteasome, beta subunit [Propionibacterium acnes HL053PA1]
 gi|314975764|gb|EFT19859.1| proteasome, beta subunit [Propionibacterium acnes HL045PA1]
 gi|314978677|gb|EFT22771.1| proteasome, beta subunit [Propionibacterium acnes HL072PA2]
 gi|314983756|gb|EFT27848.1| proteasome, beta subunit [Propionibacterium acnes HL005PA1]
 gi|314987937|gb|EFT32028.1| proteasome, beta subunit [Propionibacterium acnes HL005PA2]
 gi|314989747|gb|EFT33838.1| proteasome, beta subunit [Propionibacterium acnes HL005PA3]
 gi|315077829|gb|EFT49880.1| proteasome, beta subunit [Propionibacterium acnes HL053PA2]
 gi|315080454|gb|EFT52430.1| proteasome, beta subunit [Propionibacterium acnes HL078PA1]
 gi|315084783|gb|EFT56759.1| proteasome, beta subunit [Propionibacterium acnes HL027PA2]
 gi|315088475|gb|EFT60451.1| proteasome, beta subunit [Propionibacterium acnes HL072PA1]
 gi|315095816|gb|EFT67792.1| proteasome, beta subunit [Propionibacterium acnes HL038PA1]
 gi|315098718|gb|EFT70694.1| proteasome, beta subunit [Propionibacterium acnes HL059PA2]
 gi|315101513|gb|EFT73489.1| proteasome, beta subunit [Propionibacterium acnes HL046PA1]
 gi|315105882|gb|EFT77858.1| proteasome, beta subunit [Propionibacterium acnes HL030PA1]
 gi|315108801|gb|EFT80777.1| proteasome, beta subunit [Propionibacterium acnes HL030PA2]
 gi|327326369|gb|EGE68159.1| proteasome, beta subunit [Propionibacterium acnes HL096PA2]
 gi|327331756|gb|EGE73493.1| proteasome, beta subunit [Propionibacterium acnes HL096PA3]
 gi|327443533|gb|EGE90187.1| proteasome, beta subunit [Propionibacterium acnes HL013PA2]
 gi|327445737|gb|EGE92391.1| proteasome, beta subunit [Propionibacterium acnes HL043PA2]
 gi|327448280|gb|EGE94934.1| proteasome, beta subunit [Propionibacterium acnes HL043PA1]
 gi|327450598|gb|EGE97252.1| proteasome, beta subunit [Propionibacterium acnes HL087PA3]
 gi|327453324|gb|EGE99978.1| proteasome, beta subunit [Propionibacterium acnes HL092PA1]
 gi|327454063|gb|EGF00718.1| proteasome, beta subunit [Propionibacterium acnes HL083PA2]
 gi|328753145|gb|EGF66761.1| proteasome, beta subunit [Propionibacterium acnes HL025PA2]
 gi|328754016|gb|EGF67632.1| proteasome, beta subunit [Propionibacterium acnes HL087PA1]
 gi|328754744|gb|EGF68360.1| proteasome, beta subunit [Propionibacterium acnes HL020PA1]
 gi|328760942|gb|EGF74507.1| proteasome, beta subunit [Propionibacterium acnes HL099PA1]
 gi|332675609|gb|AEE72425.1| proteasome subunit beta [Propionibacterium acnes 266]
          Length = 278

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 27/177 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAF 69
           H  T+L +R +G VV+A D    LG  + +     +  ++       +I   AG++  A 
Sbjct: 49  HGRTVLAIRYNGGVVVAAD----LGSALARRLGQTDVDRILGTDDRCVIG-VAGAAGLAG 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------- 120
            ++   + +++       +         R+   +R+   M+        L+         
Sbjct: 104 EMIRLFQAEVDHLEKIQGQRISMDGCAVRLSSLVRSHGTMMAQGLAVTPLLAGWDELAHR 163

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                  G G   E E+    +GSG  +A         T    +E   +A +A+  A
Sbjct: 164 GRIFSYDGTGGQTE-EHSHACVGSGALFASDVLNEDYRTGMDRDESVALAIRALDTA 219


>gi|146423345|ref|XP_001487602.1| hypothetical protein PGUG_00979 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 273

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 67/206 (32%), Gaps = 23/206 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T++ +++    V++A D   S G  +   N  ++ ++GK  ++ G +G 
Sbjct: 41  MNSQQPI-ITGTSVNSIKFKDGVIVAADNMGSYGSLLRFNNIERIFKVGKETVV-GVSGD 98

Query: 65  SADAFTLLERL------EKKLEQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA 113
            +D   +   L      E+  +      LR+             R  K      A+++  
Sbjct: 99  ISDFQQIQRLLDELEITEEIYDNDGGHNLRAPNVHEYLTRVLYNRRSKMDPLWNAVVVAG 158

Query: 114 --DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEIAR 163
             D     +       +      +  G G   A+   R L+             A E   
Sbjct: 159 FNDDKTPFLRYVDLLGVTYGLSAICTGFGAHLAIPLLRQLVPDDKDYQNVTEEQAREAII 218

Query: 164 KAMSIAADICVYTNHNIVLETLKVGD 189
             M +       ++    L TLK G 
Sbjct: 219 NCMKVLFYRDARSSDKFTLVTLKQGQ 244


>gi|225435247|ref|XP_002284990.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
          Length = 245

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 57/187 (30%), Gaps = 24/187 (12%)

Query: 1   MVVMGDKH-YAVKM--------------HATTILTVRKDGVVVIAGDGQVSLGQTVMKAN 45
           M +M   H   + +                T+++ V+    +++A D   S G T+   +
Sbjct: 1   MQLMDSSHSNPMSLCSQADSQRTLYPYVTGTSVIGVKYKDGILMAADMGGSYGSTLRYKS 60

Query: 46  ARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YL 103
             +++ +GK +++      S     L    E  L         S         + +  Y 
Sbjct: 61  VERMKPIGKHSLLGASGEISDFQEILHYLDELILYDNMWDDGNSLGPKEVHSYLTRVMYN 120

Query: 104 RNLEAMILIAD-------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
           R  +   L               + T     +  E+  +A G G   A    R       
Sbjct: 121 RRNKFNPLWNSLVLGGVKNGQKYLGTVSMIGVHFEDNHVATGFGNHLARPILRDEWHEDL 180

Query: 157 SAEEIAR 163
           S E+  +
Sbjct: 181 SFEDGVK 187


>gi|14488811|pdb|1FNT|G Chain G, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488825|pdb|1FNT|U Chain U, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|178847465|pdb|2ZCY|F Chain F, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847479|pdb|2ZCY|T Chain T, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847507|pdb|3BDM|F Chain F, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847521|pdb|3BDM|T Chain T, Yeast 20s Proteasome:glidobactin A-Complex
          Length = 287

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + TT + ++ +  VV A +  ++    V + N +   ++   +I   ++G   D   L+ 
Sbjct: 32  NGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKI--QVVDRHIGCVYSGLIPDGRHLVN 89

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++   +           A   R+ +Y+             +  +    DK    +  
Sbjct: 90  RGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSI 168
                        A G G   A +    L+       SA E  ++A  I
Sbjct: 150 LEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKI 198


>gi|74212099|dbj|BAE40213.1| unnamed protein product [Mus musculus]
          Length = 264

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 26/191 (13%)

Query: 3   VMGDKHYAVKMH----------ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL 52
           +M       + H           T++L V+ DG VVIA D   S G      N  ++ R+
Sbjct: 31  LMDPASAPCEGHITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRV 90

Query: 53  GKGNIIAGFAGSSADAFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYL 103
               ++ G +G  AD   L + L      E+ L    +   R+       A   R  K  
Sbjct: 91  NDSTML-GASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMN 149

Query: 104 RNLEAMILIADKT-ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNS 157
                M++       + +       +  E   +A G G   A    R ++      +Q  
Sbjct: 150 PLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTE 209

Query: 158 AEEIARKAMSI 168
           A E+  + M +
Sbjct: 210 ARELVERCMRV 220


>gi|221106330|ref|XP_002156049.1| PREDICTED: similar to proteasome (prosome, macropain) subunit,
          beta type, 5, partial [Hydra magnipapillata]
          Length = 83

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
          H TT L  +    V++A D + S G  +     +KV  +    ++   AG +AD      
Sbjct: 19 HGTTTLAFKFKHGVIVAVDSRASAGSYIASQTVKKVIEINPY-LLGTMAGGAADCAFWQR 77

Query: 74 RLEKKL 79
           L K+ 
Sbjct: 78 VLAKEC 83


>gi|150403173|ref|YP_001330467.1| proteasome subunit alpha [Methanococcus maripaludis C7]
 gi|166199286|sp|A6VIP0|PSA_METM7 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|150034203|gb|ABR66316.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
          Length = 259

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 11/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+A D +++  + +  ++  K+ ++    + A     +     +  
Sbjct: 35  RGTTAVGIKCKDGVVLAVDRRITS-KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDR 93

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            RLE ++ +       +   LAK     K                +I   D+    +   
Sbjct: 94  ARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  E    AIGSG   A+    +      +  E    A+  
Sbjct: 154 DPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGMELALYA 198


>gi|326472773|gb|EGD96782.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
 gi|326484953|gb|EGE08963.1| proteasome component Pre4 [Trichophyton equinum CBS 127.97]
          Length = 261

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 13/171 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+    VVIA D   S G      + +++R     +++ GF G  +D   +   
Sbjct: 40  GTSVIAVKFKDGVVIASDNLGSYGSLARFTDLKRLRAFDNSSVV-GFGGDVSDMQYIDRV 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA--------DKTITLVIT 122
           L     Q            AK+         Y R  +   L          D+    + +
Sbjct: 99  LNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSS 158

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                       +A G G   A+   R L   ++  + I ++    A   C
Sbjct: 159 ADLLGTTYSAPALATGFGAHLAVPILRRLFPEEDGIDNITKERAVDAMKQC 209


>gi|50289259|ref|XP_447060.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526369|emb|CAG59993.1| unnamed protein product [Candida glabrata]
          Length = 290

 Score = 70.8 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 58/168 (34%), Gaps = 15/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++ +  VV A +  ++    V   N +   +    +I   ++G   D   L+ 
Sbjct: 33  NGATSIGIKFNDGVVFAVEKIITSKLLVPNKNLKI--QTVDKHIGVVYSGLIPDGRHLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++ + +      +    A   R+ +Y+             + A+    DK    +  
Sbjct: 91  RAREESQNFRKMYGSAIPVDAFAERVGQYVQAHTLFNSVRPFGVTAIFGGCDKNGPHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
                        A G G   A +    L+    + SA+E A+ A  I
Sbjct: 151 LEPSGTYWGYNGAATGKGRQTAKAELEKLLDKTPEMSAKEAAKHAARI 198


>gi|91772264|ref|YP_564956.1| proteasome subunit alpha [Methanococcoides burtonii DSM 6242]
 gi|91711279|gb|ABE51206.1| Proteasome alpha subunit [Methanococcoides burtonii DSM 6242]
          Length = 263

 Score = 70.8 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 16/178 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT   ++    VV+  D +++  + +   +  K+ ++ +   +A     +     +  
Sbjct: 34  RGTTAAGIKAKDGVVLIVDKRITS-RLIEAESIEKIFQIDEHIGVATSGLVADARALVDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++             L+K     K                +I   D  +  +   
Sbjct: 93  ARVEAQINMATYDEPIGVKVLSKKICDHKQTYTQYGGVRPYGTALLIAGVDDNLPRLFES 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAAD--ICVYT 176
                  E    AIG+G +  +     +     + EE      +A+  A+D  I   T
Sbjct: 153 DPSGALLEYKATAIGAGRNVFMETFEEMHRDDMTMEEAVMLGMEALYRASDVKIDPAT 210


>gi|115454751|ref|NP_001050976.1| Os03g0695600 [Oryza sativa Japonica Group]
 gi|109940125|sp|Q9LST6|PSB2_ORYSJ RecName: Full=Proteasome subunit beta type-2; AltName: Full=20S
           proteasome alpha subunit D; AltName: Full=20S proteasome
           subunit beta-4
 gi|27552546|gb|AAO19369.1| 20S proteasome beta 4 subunit [Oryza sativa Japonica Group]
 gi|108710548|gb|ABF98343.1| Proteasome subunit beta type 2, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113549447|dbj|BAF12890.1| Os03g0695600 [Oryza sativa Japonica Group]
 gi|125545359|gb|EAY91498.1| hypothetical protein OsI_13132 [Oryza sativa Indica Group]
 gi|125587570|gb|EAZ28234.1| hypothetical protein OsJ_12208 [Oryza sativa Japonica Group]
 gi|149390831|gb|ABR25433.1| 20S proteasome beta subunit d2 [Oryza sativa Indica Group]
 gi|215692385|dbj|BAG87805.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215708673|dbj|BAG93942.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 212

 Score = 70.8 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 45/154 (29%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           ++ V      V+A D        V K +  KV  L     + G +G   D     E ++K
Sbjct: 4   VIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHK-LMGASGEPGDRVQFTEFIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            L  Y  +        A            + K    +  ++   D  +   +        
Sbjct: 63  NLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  + LS    L     S EE  
Sbjct: 123 FHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAV 156


>gi|14601414|ref|NP_147951.1| proteasome subunit alpha [Aeropyrum pernix K1]
 gi|6685800|sp|Q9YC01|PSA_AERPE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|5105133|dbj|BAA80447.1| proteasome alpha subunit [Aeropyrum pernix K1]
          Length = 258

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 12/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T L ++ +  VVIA + +  +G  V   +  K+ ++     +A  G  G        
Sbjct: 37  KGWTSLGIKTNEGVVIAAEKRF-IGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDY 95

Query: 72  LERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                 +      +        +   ++ + +     +R     ++ A         V  
Sbjct: 96  ARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYR 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                       +AIGSG   A         +  S EE  + A+ I
Sbjct: 156 TDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKI 201


>gi|327304495|ref|XP_003236939.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
 gi|326459937|gb|EGD85390.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
          Length = 261

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 13/171 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+    VVIA D   S G      + +++R     +++ GF G  +D   +   
Sbjct: 40  GTSVIAVKFKDGVVIASDNLGSYGSLARFTDLKRLRAFDNSSVV-GFGGDVSDMQYIDRV 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA--------DKTITLVIT 122
           L     Q            AK+         Y R  +   L          D+    + +
Sbjct: 99  LNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSS 158

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                       +A G G   A+   R L   ++  + I ++    A   C
Sbjct: 159 ADLLGTTYSAPALATGFGAHLAVPILRRLFPEEDGIDNITKERAVDAMKQC 209


>gi|225710512|gb|ACO11102.1| Proteasome subunit beta type-3 [Caligus rogercresseyi]
          Length = 205

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 57/190 (30%), Gaps = 14/190 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           ++ + ++ ++    V IA D +       +  +  K   +G G  + G AG + D  T+ 
Sbjct: 6   INGSAVVAMKGKDCVAIASDLRFGSNLHTIMTDFPKTFEMGPGLYV-GLAGLATDIQTVH 64

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG------- 125
           ++L  + + +  +  R          +   L          +  +               
Sbjct: 65  QKLTFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPIVAGYDYVENKPFISGM 124

Query: 126 ---DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHN 179
                       +A G+     +    AL     S +E+     +A+  + D        
Sbjct: 125 DLIGASTIPEDFVASGTSEDSLVGMCEALWFEDMSPDELFEAISQALMNSFDRDSLAGWG 184

Query: 180 IVLETLKVGD 189
             +  ++   
Sbjct: 185 AEVHIIEKHQ 194


>gi|159905089|ref|YP_001548751.1| proteasome subunit alpha [Methanococcus maripaludis C6]
 gi|229598015|sp|A9A846|PSA_METM6 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|159886582|gb|ABX01519.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
          Length = 259

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 56/166 (33%), Gaps = 15/166 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++ +  VV+A D +++  + +  ++  K+ ++    + A     +     +  
Sbjct: 35  RGTTAVGIKCNDGVVLAVDRRITS-KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDR 93

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            RLE ++ +       +   LAK     K                +I   D+    +   
Sbjct: 94  ARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                  E    AIGSG   A+    +          I  + M +A
Sbjct: 154 DPSGALIEYKATAIGSGRPIAMEVLESKYDENM----IVSEGMELA 195


>gi|73981584|ref|XP_533057.2| PREDICTED: similar to Proteasome subunit beta type 4 precursor
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) [Canis familiaris]
          Length = 311

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 94  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 151

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 152 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 211

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 212 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 267


>gi|225435249|ref|XP_002284989.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
 gi|297746225|emb|CBI16281.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 57/187 (30%), Gaps = 24/187 (12%)

Query: 1   MVVMGDKH-YAVKM--------------HATTILTVRKDGVVVIAGDGQVSLGQTVMKAN 45
           M +M   H   + +                T+++ V+    +++A D   S G T+   +
Sbjct: 1   MNLMDSSHSNPMSLCSQADSQRTLYPYVTGTSVIGVKYKDGILMAADMGGSYGSTLRYKS 60

Query: 46  ARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YL 103
             +++ +GK +++      S     L    E  L         S         + +  Y 
Sbjct: 61  VERMKPIGKHSLLGASGEISDFQEILHYLDELILYDNMWDDGNSLGPKEVHSYLTRVMYN 120

Query: 104 RNLEAMILIAD-------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
           R  +   L               + T     +  E+  +A G G   A    R       
Sbjct: 121 RRNKFNPLWNSLVLGGVKNGQKYLGTVSMIGVHFEDNHVATGFGNHLARPILRDEWHEDL 180

Query: 157 SAEEIAR 163
           S E+  +
Sbjct: 181 SFEDGVK 187


>gi|254168315|ref|ZP_04875161.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|254169360|ref|ZP_04876189.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|289595863|ref|YP_003482559.1| proteasome endopeptidase complex, alpha subunit [Aciduliprofundum
           boonei T469]
 gi|197621679|gb|EDY34265.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|197622824|gb|EDY35393.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|289533650|gb|ADD07997.1| proteasome endopeptidase complex, alpha subunit [Aciduliprofundum
           boonei T469]
          Length = 243

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 14/185 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
             TT + ++    VV+  D +V   + +   +  K+  + +    A  G  G +      
Sbjct: 33  RGTTTIGLKFKDGVVLMADKRV-RSRLLDPKSMEKIFLIDEHIGCATSGLVGDARVLVDY 91

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
              + +              L++   +  + +     +R   A +LIA  D+    ++  
Sbjct: 92  ARLIAQIERVTYGERISVEHLVKRISDYKQQYTQYGGVRPFGASLLIAGIDEKGIYLMET 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLE 183
                        IG G    +             EE     +     I   +   I   
Sbjct: 152 DPSGTIMGYKADCIGGGRDTVMELFENEYREDMDFEEAIMLGLK---GIDAVSEDGITPL 208

Query: 184 TLKVG 188
           TL++G
Sbjct: 209 TLEIG 213


>gi|6324938|ref|NP_015007.1| Pre10p [Saccharomyces cerevisiae S288c]
 gi|130847|sp|P21242|PSA3_YEAST RecName: Full=Proteasome component C1; AltName: Full=Macropain
           subunit C1; AltName: Full=Multicatalytic endopeptidase
           complex subunit C1; AltName: Full=Proteinase YSCE
           subunit 1
 gi|75765705|pdb|1Z7Q|G Chain G, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765719|pdb|1Z7Q|U Chain U, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|323462941|pdb|3NZJ|F Chain F, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462955|pdb|3NZJ|T Chain T, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462969|pdb|3NZW|F Chain F, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462983|pdb|3NZW|T Chain T, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462997|pdb|3NZX|F Chain F, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463011|pdb|3NZX|T Chain T, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|173204|gb|AAA35227.1| yeast proteasome subunit YC1 [Saccharomyces cerevisiae]
 gi|1420786|emb|CAA99691.1| PRE10 [Saccharomyces cerevisiae]
 gi|151945439|gb|EDN63682.1| proteasome component YC1 (protease yscE subunit 1) [Saccharomyces
           cerevisiae YJM789]
 gi|190407655|gb|EDV10922.1| proteasome component YC1 [Saccharomyces cerevisiae RM11-1a]
 gi|256272547|gb|EEU07526.1| Pre10p [Saccharomyces cerevisiae JAY291]
 gi|259149835|emb|CAY86639.1| Pre10p [Saccharomyces cerevisiae EC1118]
 gi|285815230|tpg|DAA11123.1| TPA: Pre10p [Saccharomyces cerevisiae S288c]
 gi|323307243|gb|EGA60525.1| Pre10p [Saccharomyces cerevisiae FostersO]
 gi|323335390|gb|EGA76677.1| Pre10p [Saccharomyces cerevisiae Vin13]
 gi|323346384|gb|EGA80673.1| Pre10p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352239|gb|EGA84776.1| Pre10p [Saccharomyces cerevisiae VL3]
          Length = 288

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + TT + ++ +  VV A +  ++    V + N +   ++   +I   ++G   D   L+ 
Sbjct: 33  NGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKI--QVVDRHIGCVYSGLIPDGRHLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++   +           A   R+ +Y+             +  +    DK    +  
Sbjct: 91  RGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSI 168
                        A G G   A +    L+       SA E  ++A  I
Sbjct: 151 LEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKI 199


>gi|27450761|gb|AAO14683.1|AF508264_1 beta 3 subunit of 20S proteasome [Pyrocystis lunula]
          Length = 214

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 12/175 (6%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  + + I+ +  DG V IA D +  + Q       R+           G AG + D  T
Sbjct: 5   MDYNGSAIVAMAGDGCVGIASDTRYGVRQLQTVGCQRQKTFQLTDQTFVGIAGLATDVQT 64

Query: 71  LLERLEKKLEQYPNQLLRSSVELAK---------DWRMDKYLRNLEAMILIADKTITLVI 121
           + + L+ +++ +  +  R+               + R   Y        L  D    L  
Sbjct: 65  MAQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDKDHNPFLCA 124

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
                 +      +  G+          +    + + +E+     + +  A D  
Sbjct: 125 FDFIGAMSKAQDFVVSGTSSEQLFGVCESFWRPKMNKDELFETLAQCLLSAVDRD 179


>gi|154308476|ref|XP_001553574.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150852839|gb|EDN28031.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 198

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 49/187 (26%), Gaps = 20/187 (10%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  N  K+   G    + G  G + D  T+ +    K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYL-GLTGLATDVSTVSDLFRYKVN 59

Query: 81  QYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG-DVLEP 130
            Y  +  R  S   +A       Y R      +               +        ++ 
Sbjct: 60  MYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQN---------SAEEIARKAMSIAADICVYTNHNIV 181
               +  G+           L                 E   +A+  A D    +     
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLLNSQIQGPEDLFETISQALLNAVDRDALSGWGAH 179

Query: 182 LETLKVG 188
           +  ++  
Sbjct: 180 VYIIEKD 186


>gi|190408868|gb|EDV12133.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
          Length = 242

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 64/213 (30%), Gaps = 31/213 (14%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            +      +  TIL +  +   V+AGD +     ++      KV   G   +++   G +
Sbjct: 19  HQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSA-NGFA 77

Query: 66  ADAFTLLERLEKKLEQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKTIT 118
           AD   L++R +  ++ Y     R        S E +      +         +IA     
Sbjct: 78  ADGDALVKRFKNSVKWYHFGPQRQKIIYKLCSKEYSTSSGTGRGFFPYYVHTIIAGLDED 137

Query: 119 L---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----------------NSA 158
               V +             A G+  S  +      ++ +                  S 
Sbjct: 138 GKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSV 197

Query: 159 EE---IARKAMSIAADICVYTNHNIVLETLKVG 188
           EE   + R + + A +  +     + +  +   
Sbjct: 198 EEVIKLVRDSFTSATERHIQVGDGLEILIVTKD 230


>gi|296228789|ref|XP_002759964.1| PREDICTED: proteasome subunit beta type-4-like [Callithrix jacchus]
 gi|166092117|gb|ABY82097.1| proteasome beta 4 subunit (predicted) [Callithrix jacchus]
          Length = 264

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|301767894|ref|XP_002919381.1| PREDICTED: proteasome subunit beta type-4-like [Ailuropoda
           melanoleuca]
          Length = 264

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|331236305|ref|XP_003330811.1| proteasome subunit beta type-1-B [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309309801|gb|EFP86392.1| proteasome subunit beta type-1-B [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 269

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 41/215 (19%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  TIL +      VIAGD + S G ++    A KV +L +   IA   G +AD   L++
Sbjct: 43  NGGTILAISSKEFAVIAGDTRQSEGYSIQTRYAPKVTQLTEECCIA-VNGFAADGKELVK 101

Query: 74  RLEKKLEQYPNQL-----LRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMG 125
           +L+++L+ Y +       ++S   L +     +      A +++A         V +   
Sbjct: 102 QLKQRLQWYQHTHASQPSVQSIARLVQTMLYGRRFFPYYAYVILAGIDRDGTGAVYSFDP 161

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM-----------------------------STQN 156
                     A G+  S         +                              +Q 
Sbjct: 162 VGSYERESCRAAGAAQSLVQPFLDNQVGGKNMTRDPSGPAPPPEPVYAQGQSYTPPRSQL 221

Query: 157 SAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
             E+   +   A + AA+  +     + +  ++ G
Sbjct: 222 PLEKVQALVTDAFTGAAERHIEVGDGLEIFIIEAG 256


>gi|194036225|ref|XP_001929676.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Sus scrofa]
          Length = 264

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 65/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERLEKKL---------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L + +           Y  + + S +  A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQAEARELVERCMRV 220


>gi|225710324|gb|ACO11008.1| Proteasome subunit beta type-3 [Caligus rogercresseyi]
          Length = 205

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 57/190 (30%), Gaps = 14/190 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           ++ + ++ ++    V IA D +       +  +  K   +G G  + G AG + D  T+ 
Sbjct: 6   INGSAVVAMKGKDCVAIASDLRFGSNLHTIMTDFPKTFEMGPGLYV-GLAGLATDIQTVH 64

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG------- 125
           ++L  + + +  +  R          +   L          +  +               
Sbjct: 65  QKLTFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPIVAGYDYVENKPFISGM 124

Query: 126 ---DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHN 179
                       +A G+     +    AL     S +E+     +A+  + D        
Sbjct: 125 DLIGASTIPEDFVASGTSEDTLVGMCEALWFEDMSPDELFEAISQALMNSFDRDSLAGWG 184

Query: 180 IVLETLKVGD 189
             +  ++   
Sbjct: 185 AEVHIIEKHQ 194


>gi|281352869|gb|EFB28453.1| hypothetical protein PANDA_007986 [Ailuropoda melanoleuca]
          Length = 260

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|225715548|gb|ACO13620.1| Proteasome subunit beta type-7 precursor [Esox lucius]
          Length = 133

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 1/91 (1%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V +  D + +    V   N  K+  +       G AG +ADA    + 
Sbjct: 44  GTTIAGIVFKDGVTLGADTRATDDMVVAGKNCMKIHYIAPNIYCCG-AGVAADAEVTTQM 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN 105
           +   +E +     R  + +    ++ + L  
Sbjct: 103 MSSNVELHSLSTGRPPLVVTVTRQLKQMLFR 133


>gi|169410926|gb|ACA57936.1| proteasome subunit beta type (predicted) [Callicebus moloch]
          Length = 261

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|45357814|ref|NP_987371.1| proteasome subunit alpha [Methanococcus maripaludis S2]
 gi|59798297|sp|Q6M0L9|PSA_METMP RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|45047374|emb|CAF29807.1| proteasome, subunit alpha [Methanococcus maripaludis S2]
          Length = 259

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 65/197 (32%), Gaps = 22/197 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+A D +++  + +  ++  K+ ++    + A     +     +  
Sbjct: 35  RGTTAVGIKCKDGVVLAVDRRITS-KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDR 93

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++ +       +   LAK     K                +I   D+    +   
Sbjct: 94  ARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA-----------DI 172
                  E    AIGSG   A+    +      +  E    A+   +           D+
Sbjct: 154 DPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTTEELKPENIDM 213

Query: 173 CVYTNHNIVLETLKVGD 189
            +  +   ++E + V +
Sbjct: 214 AIIKDSGKLVEKISVDE 230


>gi|300703912|ref|YP_003745514.1| hydrolase [Ralstonia solanacearum CFBP2957]
 gi|299071575|emb|CBJ42899.1| putative hydrolase, proteasome hslV type peptidase domain
           [Ralstonia solanacearum CFBP2957]
          Length = 191

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 15/189 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + V+K G V IA D  V+ G T +      N +  +       +AG         +L
Sbjct: 2   TTCVVVKKGGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTAHFPVMRSL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVIT 122
           L  L  +        +  +     +   D+Y              + I       T +  
Sbjct: 62  LAGLADECRLGTRDDVFRTFLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANPTGIYG 121

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNI 180
                 +   +    IGSG ++AL A  A+      +A +IA+  +S   +    +   I
Sbjct: 122 VYSYREVFSFDRFWGIGSGRNFALGAMSAVYDLPGRTAADIAQAGVSAGVEFDKSSGGPI 181

Query: 181 VLETLKVGD 189
            + T+++ D
Sbjct: 182 EVHTVRLQD 190


>gi|314955495|gb|EFS99898.1| proteasome, beta subunit [Propionibacterium acnes HL027PA1]
          Length = 278

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 27/177 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAF 69
           H  T+L +R +G VV+A D    LG  + +     +  ++       +I   AG++  A 
Sbjct: 49  HGRTVLAIRYNGGVVVAAD----LGSALARRLGQTDVDRILGTDDRCVIG-VAGAAGLAG 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------- 120
            ++   + +++       +         R+   +R+   M+        L+         
Sbjct: 104 EMIRLFQAEVDHLEKIQGQRISMDGCAVRLSSLVRSHGTMMAQGLAVTPLLAGWDELAHR 163

Query: 121 -----ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                  G G   E       +GSG  +A         T    +E   +A +A+  A
Sbjct: 164 GRIFSYDGTGGQTEENFH-ACVGSGALFASDVLNEDYRTGMDRDESVALAIRALDTA 219


>gi|327239592|gb|AEA39640.1| proteasome subunit beta type 10 [Epinephelus coioides]
          Length = 148

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 2/109 (1%)

Query: 3   VMGDKHYAVKMH-ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           + G+      M   TTI  V  +  VV+  D + +  + V      K+  +       G 
Sbjct: 28  LFGEGQTPKAMKTGTTIAGVVFNDGVVLGADTRATSSEVVADKMCAKIHYIAPNIYCCG- 86

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
           AG++AD     E L   L  +     R+   +     +   L      I
Sbjct: 87  AGTAADTEKTTELLSSNLTIFSLNSGRNPRVVMAVNILQDMLYRYHGQI 135


>gi|311254328|ref|XP_003125813.1| PREDICTED: proteasome subunit beta type-4 isoform 2 [Sus scrofa]
          Length = 261

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 65/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERLEKKL---------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L + +           Y  + + S +  A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQAEARELVERCMRV 220


>gi|223997434|ref|XP_002288390.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975498|gb|EED93826.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 207

 Score = 70.0 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 55/148 (37%), Gaps = 12/148 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVR----RLGKGNIIAGFAGSSADAFT 70
            TTIL VR +G +V+  D + S+   V    A K+     R      +   +GS+AD   
Sbjct: 9   GTTILAVRYNGGIVVGADTRTSVSGYVSNRYAAKLTFVLDREWTSTCVICRSGSAADTQH 68

Query: 71  LLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL----VITG 123
           L   +  +L   +         S   +    +     NL A ++ A     L    + T 
Sbjct: 69  LASVIRTELVARQLLYRIRGTVSHAASLSRNLLVNEPNLSASLICAGYDHVLGRGVIYTI 128

Query: 124 M-GDVLEPENGVMAIGSGGSYALSAARA 150
             G  +  E    A GSG SY L    +
Sbjct: 129 SPGGTVFEERAWAAGGSGSSYILGHLDS 156


>gi|313837720|gb|EFS75434.1| proteasome, beta subunit [Propionibacterium acnes HL037PA2]
 gi|314927398|gb|EFS91229.1| proteasome, beta subunit [Propionibacterium acnes HL044PA1]
 gi|314972659|gb|EFT16756.1| proteasome, beta subunit [Propionibacterium acnes HL037PA3]
 gi|328907482|gb|EGG27248.1| 20S proteasome beta-subunit precursor [Propionibacterium sp. P08]
          Length = 279

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 59/176 (33%), Gaps = 25/176 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAF 69
           H  TIL +R  G VV+A D    LG  + K     +  ++       +I   AG++  A 
Sbjct: 49  HGRTILAIRYSGGVVVAAD----LGSALAKRLGQTDIDRILGTDDRCVIG-VAGAAGLAG 103

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG---- 125
            ++   + +++       +      +  R+   +R+   M+        L+         
Sbjct: 104 EMIRLFQAEVDHLEKIQGQRISMDGRAVRLSSLVRSNGTMMAQGLAVTPLLAGWDDLAHR 163

Query: 126 ---------DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                         E+    +GSG  +A              +E   +A +A+  A
Sbjct: 164 GRIFSYDGTGGRTEEHSHACVGSGALFASGVLNEGFRAGMDRDESVTLAIRALGTA 219


>gi|239815155|ref|YP_002944065.1| 20S proteasome A and subunit betas [Variovorax paradoxus S110]
 gi|239801732|gb|ACS18799.1| 20S proteasome A and B subunits [Variovorax paradoxus S110]
          Length = 197

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 24/195 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-----GNIIAGFAGSSADAFT 70
           TT++ VRK G V +A D  V+ G T +   A   +++       G  +   AG++A    
Sbjct: 2   TTVVAVRKGGQVTMAADSLVTFGDTRLSHRAEANQKIFTVEDAAGQSLFAVAGAAAHFLV 61

Query: 71  LLERLEKKLEQ----------------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
           L   L  +  +                    L  +     K+   + Y  +   M++   
Sbjct: 62  LQHALAAQPREALLFGSKHEIFRTFTLLHPVLKDAFFMQTKEDEHEPYESSQFTMLMANQ 121

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADIC 173
             I  + +     +       +IGSG S+AL A  A       ++ ++A   ++ A +  
Sbjct: 122 SGIYGIYS--YREVFEFKQFWSIGSGRSFALGAMHAAYDIKSRTSRDVAEAGIAAACEFD 179

Query: 174 VYTNHNIVLETLKVG 188
             +   + + TLK+ 
Sbjct: 180 RNSAPPVDVLTLKLK 194


>gi|195401414|ref|XP_002059308.1| GJ18283 [Drosophila virilis]
 gi|194142314|gb|EDW58720.1| GJ18283 [Drosophila virilis]
          Length = 1176

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 15/169 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++L +R DG ++++ D  V+ G      N  +V ++    ++ G    +     +   
Sbjct: 70  GSSVLGIRFDGGILVSADTLVTYGNLARYQNVDRVIKISDSVLLGGGGDFADIQSIVRTI 129

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLR-------NLEAMILIA---DKTITLVITGM 124
            +K +  +      S   +A    + + L         L+A I++A   D     +    
Sbjct: 130 DQKIINDHCRDDGASMKPMALVNWLTRLLYGRRSLKQPLKAEIIVAGIEDGCRPYLSAVD 189

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
                 EN V A G     A+   R             A  + R  M I
Sbjct: 190 ARGSPFENYVAASGFARLIAVPLVRERKPIDRDFSLKEASTLIRDCMRI 238


>gi|302546680|ref|ZP_07299022.1| LOW QUALITY PROTEIN: proteasome beta subunit [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302464298|gb|EFL27391.1| LOW QUALITY PROTEIN: proteasome beta subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 265

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 17/144 (11%)

Query: 51  RLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
              + + + G AG++  A  +++  + +LE +            K  R+   +R    M 
Sbjct: 73  PADEYSAV-GIAGTAGLAVEMVKLFQLELEHFEKVEGTVLSLEGKANRLSTMIRGNLGMA 131

Query: 111 LIADKTITLVITGM-------------GDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
           +     + L                        E G  A GSG ++A  A + L     +
Sbjct: 132 MQGLAVVPLFAGYDVDREKGRIFSYDVTGGRSEERGFAATGSGSTFARGALKKLYREDLT 191

Query: 158 AEEIA---RKAMSIAADICVYTNH 178
            E+ A    +A+  AAD    T  
Sbjct: 192 EEQAATAVIQALYDAADDDSATGG 215


>gi|300691342|ref|YP_003752337.1| hydrolase, proteasome hslV type peptidase domain [Ralstonia
           solanacearum PSI07]
 gi|299078402|emb|CBJ51053.1| putative hydrolase, proteasome hslV type peptidase domain
           [Ralstonia solanacearum PSI07]
          Length = 191

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 15/189 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + V+KDG V IA D  V+ G T +      N +  +       +AG          L
Sbjct: 2   TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTAHFPVMRGL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVIT 122
           L  L  +        +  +     +   D+Y              + I       T +  
Sbjct: 62  LAGLADECRLGSRDDVFRTFLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANPTGIYG 121

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNI 180
                 +   +    IGSG ++AL A  A+      +A +IA+  ++   +    +   I
Sbjct: 122 VYSYREVFAFDRFWGIGSGRNFALGAMSAVYDLPGRTAVDIAQAGVAAGVEFDKSSGGPI 181

Query: 181 VLETLKVGD 189
            + T+++ D
Sbjct: 182 EVHTVRLQD 190


>gi|269859513|ref|XP_002649481.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
 gi|220067032|gb|EED44500.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
          Length = 206

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 57/183 (31%), Gaps = 13/183 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
            +     +  ++L +     V+I GD ++ +G   +      + ++       G +G   
Sbjct: 2   SNDISTYYGGSLLGMCGKNSVIIVGDKRLGMGNFTVNTERTSIHQI-NSKCFIGLSGFLP 60

Query: 67  DAFTLLERLEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTI 117
           D   L+  +   ++ +     R             +   +R    L     ++ +     
Sbjct: 61  DCQKLISIITNHIKLFELNENRIIEIDEVKNLVSYVLYSYRTTGPLYLQPIIVGLDRNDK 120

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICV 174
              I+      E     ++IG+  +       AL       +++   A +A   A D   
Sbjct: 121 PYAISMDCLGCETIYHYVSIGTAENNLTGICEALYIKDMDEDQLFTNAMQAFINAVDRDA 180

Query: 175 YTN 177
            + 
Sbjct: 181 LSG 183


>gi|125776797|ref|XP_001359396.1| GA11323 [Drosophila pseudoobscura pseudoobscura]
 gi|195152593|ref|XP_002017221.1| GL22187 [Drosophila persimilis]
 gi|54639140|gb|EAL28542.1| GA11323 [Drosophila pseudoobscura pseudoobscura]
 gi|194112278|gb|EDW34321.1| GL22187 [Drosophila persimilis]
          Length = 268

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 51/166 (30%), Gaps = 15/166 (9%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L +R DG V+IA D  VS G      N  +V  +    I+ G    +          +K
Sbjct: 60  VLGIRYDGGVMIAADTLVSYGSLARYQNILRVFPINNNIILGGGGDFADIQSIKRTIDQK 119

Query: 78  KLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD--------KTITLVITGMGDV 127
            +E        +    A    + +  Y R      L  D             +       
Sbjct: 120 MIEDQCYADGITMKPKALSSWLTRVLYNRRSRMNPLYIDVVVGGIEQDGTPYLANVDLRG 179

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARKAMSI 168
              E+ V+A G     AL   R             A E+ RK M +
Sbjct: 180 RAYEDYVVATGFARHLALPLVRERKPKDREFTAEEASELIRKCMEV 225


>gi|331248886|ref|XP_003337064.1| proteasome subunit beta type-4 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309316054|gb|EFP92645.1| proteasome subunit beta type-4 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 264

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 63/180 (35%), Gaps = 21/180 (11%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T++L ++  G V++A D   S G      + R++  +G+  +I G  G  
Sbjct: 43  HTQQPI-VTGTSVLGIKYKGGVMLAADMLASYGSLARFKDIRRLVPVGEHTVI-GAGGDL 100

Query: 66  ADAFTLLERLEKKLEQ-------YPNQLLRSSVELAKD--WRMDKYLRNLEAMILIADKT 116
           +D   + + LE ++ +       +  +  +    LA+    R  K      + ++     
Sbjct: 101 SDFQYIQKVLEARMTEEVLADDGHILKTPQIFEYLARIMYNRRTKGNPLWNSFVVGGIDK 160

Query: 117 ---ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST------QNSAEEIARKAMS 167
                 +              +A G G   A    R ++          +  E+ARK + 
Sbjct: 161 ASQEGFLSYVDLIGTTYSAPSIATGYGSYIAQPLLRKVLDDLPNGHLDLTP-ELARKTLE 219


>gi|152981668|ref|YP_001352365.1| hypothetical protein mma_0675 [Janthinobacterium sp. Marseille]
 gi|151281745|gb|ABR90155.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 189

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 14/172 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + V+K+  + IA D  V+ G T +      N +  +       +AG A        L
Sbjct: 2   TTCVVVKKNREIAIACDSLVTFGDTRLSHAYEENNKMFQIGQSYVTLAGTAAHFPVMRKL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL----------RNLEAMILIADKTITLVI 121
           L  + +  +      +  +   A     D+Y                +  +      +  
Sbjct: 62  LTGMGEDCKLNSRDEVFDTFTKAHQILKDQYFLNTKEEEDDPYESSQIATLVANPYGIFG 121

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                 +   +    IGSG ++AL A  A      SA EIA   +   A+  
Sbjct: 122 IYSYREVFSFDRFWGIGSGRNFALGAMYAAYDGAASAREIAEIGVHAGAEFD 173


>gi|312137045|ref|YP_004004382.1| proteasome endopeptidase complex, alpha subunit [Methanothermus
           fervidus DSM 2088]
 gi|311224764|gb|ADP77620.1| proteasome endopeptidase complex, alpha subunit [Methanothermus
           fervidus DSM 2088]
          Length = 251

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 17/190 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    +V+  D + +  + V   +  K+ ++ +    A     +     + +
Sbjct: 34  RGTTSLGVKSKEGIVLLVDKRPTS-RLVEPKSIEKIFQIDEHIGAATSGLVADARVIIEK 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM---------ILIADKTITLVITG 123
            R+E ++ +           L K     K L               +   +     +   
Sbjct: 93  ARIEAQINRITYNEPIRVETLVKKICDMKQLYTQHGGVRPFGSALIVGGVNGKKPRLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD-ICVYTNHN 179
                  E    AIG+G   A+           +   A ++A  A+  A +     T  +
Sbjct: 153 DPSGALIEYKATAIGAGRPIAMEEFERKYRDDITLKEAIDLALDAVYEATEGR--TTAKS 210

Query: 180 IVLETLKVGD 189
           I + T+   D
Sbjct: 211 IEIATITTKD 220


>gi|270603325|ref|ZP_06221603.1| ATP-dependent protease HslV [Haemophilus influenzae HK1212]
 gi|270318187|gb|EFA29402.1| ATP-dependent protease HslV [Haemophilus influenzae HK1212]
          Length = 58

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/57 (70%), Positives = 47/57 (82%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
          TTI++VR+ G VV+ GDGQVSLG TVMK NARKVRRL  G ++AGFAG +ADAFTL 
Sbjct: 2  TTIVSVRRKGQVVVGGDGQVSLGNTVMKGNARKVRRLYNGKVLAGFAGGTADAFTLF 58


>gi|73540999|ref|YP_295519.1| 20S proteasome, A and B subunits [Ralstonia eutropha JMP134]
 gi|72118412|gb|AAZ60675.1| 20S proteasome, A and B subunits [Ralstonia eutropha JMP134]
          Length = 205

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 19/191 (9%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + VRK   V IA D  V+ G T +      N +          +AG          L
Sbjct: 2   TTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPIGDSFVALAGTTAHFPVMRAL 61

Query: 72  LERLEKKLEQYPNQLLRSSVEL------------AKDWRMDKYLRNLEAMILIADKTITL 119
           L  + ++        +  +                K+   D Y  +    ++     I  
Sbjct: 62  LAGMGEECRLGSRDDVFRTFLKVHEKLKSEYFINTKEDEDDPYESSQIVCLIANPAGIFG 121

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNH 178
           V +     +   +    IGSG +YAL A  A+       A  +AR  +    +    +  
Sbjct: 122 VYS--YREVFSFDRFWGIGSGRNYALGAMHAVYDKPDLDAAAVARIGVDAGIEFDKSSAG 179

Query: 179 NIVLETLKVGD 189
            I + T+++ +
Sbjct: 180 PIEVHTVRLHE 190


>gi|194289415|ref|YP_002005322.1| hydrolase, proteasome hslv type peptidase domain [Cupriavidus
           taiwanensis LMG 19424]
 gi|193223250|emb|CAQ69255.1| putative hydrolase, proteasome hslV type peptidase domain
           [Cupriavidus taiwanensis LMG 19424]
          Length = 220

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 61/189 (32%), Gaps = 15/189 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + VRK   V IA D  V+ G T +      N +          +AG         TL
Sbjct: 2   TTCVVVRKGAEVAIAADALVTFGDTRLSRAYERNQKVFPVGDGFIALAGTTAHFPVMRTL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVIT 122
           L  L  +        +  +     +     Y              + I+        +  
Sbjct: 62  LAGLGDECRLGSRDDVFRTFLKVHEKLKSDYFVNTKEDDDDPYESSQIVCLIANPAGIFG 121

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALM-STQNSAEEIARKAMSIAADICVYTNHNI 180
                 +   +    IGSG +YAL A  A+       A EIAR  +    +    +   I
Sbjct: 122 VYSYREVFSFDRFWGIGSGRNYALGAMHAVYDRPDLGAGEIARIGVDAGVEFDKSSAGPI 181

Query: 181 VLETLKVGD 189
            + T+++ +
Sbjct: 182 EVHTVRLRE 190


>gi|195453376|ref|XP_002073761.1| GK14279 [Drosophila willistoni]
 gi|194169846|gb|EDW84747.1| GK14279 [Drosophila willistoni]
          Length = 267

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 68/178 (38%), Gaps = 17/178 (9%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           ++ +     +++L +R D  V+IA D  VS G      +  +V ++    I+ G +G  A
Sbjct: 48  RNTSSITTGSSVLGIRFDEGVMIAADTLVSYGSLARYQDIHRVFKINNNIILGG-SGDFA 106

Query: 67  DAFTLLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------K 115
           D  ++   +++K+   + Y +Q+     EL+       Y R      L  D        +
Sbjct: 107 DIQSIKRNIDQKMIEDQYYDDQITMKPKELSSWLTRVLYGRRSRMNPLYIDVVVGGVDKQ 166

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
            +  +          E+ V+A G     AL   R             A ++ RK M +
Sbjct: 167 GVPFLGNVDLRGRAYEDYVVATGFARHLALPLVRERKPADRDFTAQEASDLIRKCMEV 224


>gi|301092289|ref|XP_002997003.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
 gi|262112192|gb|EEY70244.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
          Length = 231

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 18/190 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V++A D   S G      + R++  +     + G  G  +D   + ++
Sbjct: 14  GTSVIALKYKSGVMMAADTLGSYGSLARFTDQRRLTAV-HNTTLLGAGGDFSDFQFIKDK 72

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA---------DKTITLVI 121
           ++ +LE Y           A +         Y R  +   L           +     + 
Sbjct: 73  MD-ELEVYDFNEDDGCDTTAPEIYHYLQRLLYHRRNKFDPLWNTVVVGGLNPETGKPFLG 131

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNH 178
                 L  E   +A G G    +   R           A  +    M +       T +
Sbjct: 132 QITMIGLAFEGDYVATGFGHHLGMPLLRKHWRPNMEEADARNLLEDCMRVCFYRDCRTIN 191

Query: 179 NIVLETLKVG 188
            +    ++  
Sbjct: 192 RVQFAKVEAD 201


>gi|194898711|ref|XP_001978911.1| GG11060 [Drosophila erecta]
 gi|190650614|gb|EDV47869.1| GG11060 [Drosophila erecta]
          Length = 268

 Score = 69.6 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 62/170 (36%), Gaps = 17/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++L +R D  V++A D  VS G      N  +V ++ K  ++ G +G  AD  ++   
Sbjct: 57  GSSVLGIRYDAGVMLAADTLVSYGSLARYQNIERVFKINKNILLGG-SGDFADIQSIKRN 115

Query: 75  LEKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITG 123
           +++K+ +   Y + +      LA       Y R      L  D        +    +   
Sbjct: 116 IDQKMIEDQCYDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANV 175

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
                  E+ V+A G     A+   R             A E+ R  M +
Sbjct: 176 DLRGRSHEDYVVATGFARHLAIPLVREKKPKDRDFTAVEASELIRTCMEV 225


>gi|114559491|ref|XP_001172335.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 4 isoform 2 [Pan troglodytes]
          Length = 238

 Score = 69.2 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220


>gi|67473671|ref|XP_652586.1| proteasome subunit beta Type 4 precursor [Entamoeba histolytica
           HM-1:IMSS]
 gi|56469453|gb|EAL47200.1| proteasome subunit beta Type 4 precursor, putative [Entamoeba
           histolytica HM-1:IMSS]
          Length = 225

 Score = 69.2 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 16/169 (9%)

Query: 15  AT-TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            T ++L ++ +G V+IA D   S G   +  +  +V +LGK  IIAG +G  +D   L E
Sbjct: 18  GTASVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYTIIAG-SGEYSDFIELNE 76

Query: 74  RLEKK------LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVIT 122
            L+KK       E   N    S +       + K+  + + + +        K    +  
Sbjct: 77  TLQKKVNGDECCEGKENGYKPSELYSYAQRILYKHRCDQKPLFVTLIVGGVKKDEIFLGQ 136

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
                       +A G G   A+   R       S   AE +  + M I
Sbjct: 137 TDMYGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIERCMKI 185


>gi|41352683|gb|AAS01048.1| putative proteasome 20S beta1 subunit [Brassica napus]
          Length = 175

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 35  VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELA 94
            S G  V    + K+ +L     +   +GS+AD+  + + +   L Q+  QL + +    
Sbjct: 1   TSTGMYVANRASDKITQLTDNVYVC-RSGSAADSQVVSDYVRYFLHQHTIQLGQPATVKV 59

Query: 95  KDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE--------PENGVMAIGSGGSYALS 146
               + + L      +L     +       G  +          E      GSG SY   
Sbjct: 60  SAN-LIRMLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYG 118

Query: 147 AARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                     +   AE++  KA+S+A      +   +    +   
Sbjct: 119 FFDQAWKENMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSE 163


>gi|30584083|gb|AAP36290.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 4
           [synthetic construct]
 gi|61369443|gb|AAX43338.1| proteasome subunit beta type 4 [synthetic construct]
          Length = 265

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220


>gi|118345684|ref|XP_976672.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|89288089|gb|EAR86077.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 289

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 54/186 (29%), Gaps = 12/186 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            ++++ +  +G V+IA D  +S G      + ++V ++      A  G      +   L+
Sbjct: 74  GSSVIGIAFNGGVIIASDTSISYGGMSRYNHIQRVHKITDNCAFASSGEFSDFQELSRLI 133

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
           + +  +     +++  +  +        +Y    +   L         D     +     
Sbjct: 134 DEMTNQTYLNDDKINYTPRDYGNYISQLQYHHRNKMNPLYLWNVIGGVDNGKPYLAHIDL 193

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                E   ++ G G                S   A+++               +  I +
Sbjct: 194 YGTYIETNHVSTGFGNYLCGPLFEKGWRADMSEQEAKQLVNTCFQALFYRDARAHETIQV 253

Query: 183 ETLKVG 188
             +   
Sbjct: 254 TVIDKN 259


>gi|302803979|ref|XP_002983742.1| hypothetical protein SELMODRAFT_271646 [Selaginella moellendorffii]
 gi|300148579|gb|EFJ15238.1| hypothetical protein SELMODRAFT_271646 [Selaginella moellendorffii]
          Length = 256

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +++L ++    +++A D   S G T    + ++++ +GK  +I   G         T+L
Sbjct: 41  GSSVLGIKYKDGILLAADMAASYGSTKRYKSFQRLKPVGKHAVIGASGEMSDFQQISTML 100

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-------KTITLVITGMG 125
           + L  + + + +       E+        Y R  +   L  +            +     
Sbjct: 101 DELTLRDQMWDDSNTLGPHEIHSYLNRIMYQRRNKFDPLWNNIILGGVKNGKKYLGVVSM 160

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
             +  E+  +A G G   A    R       + EE  R
Sbjct: 161 IGVHFEDDHVATGFGQHLARPELRKQWRADMTLEEGVR 198


>gi|307248794|ref|ZP_07530807.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
          serovar 2 str. S1536]
 gi|306854721|gb|EFM86911.1| ATP-dependent protease hslV [Actinobacillus pleuropneumoniae
          serovar 2 str. S1536]
          Length = 71

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/65 (58%), Positives = 45/65 (69%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
          TTI+ VRKDG V I GDGQ +LG  V K   RKVRR+ K  ++ GFAGS+ADAF L +  
Sbjct: 2  TTIVCVRKDGKVAIGGDGQATLGNCVEKGTVRKVRRMYKDKVVTGFAGSTADAFILRDLF 61

Query: 76 EKKLE 80
          EKKL 
Sbjct: 62 EKKLN 66


>gi|308804185|ref|XP_003079405.1| beta 7 subunit of 20S proteasome (ISS) [Ostreococcus tauri]
 gi|116057860|emb|CAL54063.1| beta 7 subunit of 20S proteasome (ISS) [Ostreococcus tauri]
          Length = 289

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 59/171 (34%), Gaps = 13/171 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+ L ++  G V++A D     G T    +  +V+R+     IA F G  +D   + + 
Sbjct: 73  GTSALGLKYAGGVLLATDTLACYGSTKRYKSVERVKRVNDKCAIA-FTGELSDFAYVCDL 131

Query: 75  LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITG 123
           LE+   +     +   R + E+ +      Y R  +   L           K      T 
Sbjct: 132 LEELTTEDFCEDDGTTRDAEEIYQYLTRVMYNRRSKFDPLWNSFVVAGYDAKGEAFCGTV 191

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
                   +  +A G G   A    R       + EE A + M  A   CV
Sbjct: 192 GMIGTHYADDHVAAGFGNHIARPIFREFYKPDLTEEE-AVEIMKSALYACV 241


>gi|150400006|ref|YP_001323773.1| proteasome subunit alpha [Methanococcus vannielii SB]
 gi|166199289|sp|A6URN9|PSA_METVS RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|150012709|gb|ABR55161.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
          Length = 259

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 53/165 (32%), Gaps = 11/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+A D +++  + +  ++  K+ ++    + A     +     +  
Sbjct: 35  RGTTAVGIKCKDGVVLAVDRRITS-KLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDR 93

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++ +       +   LAK     K                +I   D+    +   
Sbjct: 94  ARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSARLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  E    AIGSG   A+           S  E    A+  
Sbjct: 154 DPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELAIYA 198


>gi|565651|dbj|BAA05647.1| proteasome subunit HsN3 [Homo sapiens]
 gi|30582673|gb|AAP35563.1| proteasome (prosome, macropain) subunit, beta type, 4 [Homo
           sapiens]
 gi|61359383|gb|AAX41710.1| proteasome subunit beta type 4 [synthetic construct]
 gi|119573827|gb|EAW53442.1| proteasome (prosome, macropain) subunit, beta type, 4 [Homo
           sapiens]
 gi|123979690|gb|ABM81674.1| proteasome (prosome, macropain) subunit, beta type, 4 [synthetic
           construct]
 gi|123982410|gb|ABM82946.1| proteasome (prosome, macropain) subunit, beta type, 4 [synthetic
           construct]
 gi|123997073|gb|ABM86138.1| proteasome (prosome, macropain) subunit, beta type, 4 [synthetic
           construct]
 gi|189054053|dbj|BAG36560.1| unnamed protein product [Homo sapiens]
 gi|1091573|prf||2021261A proteasome:SUBUNIT=HsN3
          Length = 264

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220


>gi|302817682|ref|XP_002990516.1| hypothetical protein SELMODRAFT_272144 [Selaginella moellendorffii]
 gi|300141684|gb|EFJ08393.1| hypothetical protein SELMODRAFT_272144 [Selaginella moellendorffii]
          Length = 256

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +++L ++    +++A D   S G T    + ++++ +GK  +I   G         T+L
Sbjct: 41  GSSVLGIKYKDGILLAADMAASYGSTKRYKSFQRLKPVGKHAVIGASGEMSDFQQISTML 100

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-------KTITLVITGMG 125
           + L  + + + +       E+        Y R  +   L  +            +     
Sbjct: 101 DELTLRDQMWDDSNTLGPHEIHSYLNRIMYQRRNKFDPLWNNIILGGVKNGKKYLGVVSM 160

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
             +  E+  +A G G   A    R       + EE  R
Sbjct: 161 IGVHFEDDHVATGFGQHLARPELRKQWRADMTLEEGVR 198


>gi|156844148|ref|XP_001645138.1| hypothetical protein Kpol_538p40 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115795|gb|EDO17280.1| hypothetical protein Kpol_538p40 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 274

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 61/173 (35%), Gaps = 15/173 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++ +  VV A +  +S    V K N +   ++   +I   ++G   D   L+ 
Sbjct: 33  NGATSVGIKCNDGVVFAVEKLISSKLLVPKKNVKI--QVIDRHIGCVYSGLIPDGRHLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++ + +     +     A   R+ +Y+             + A+    D   + +  
Sbjct: 91  RGREESKSFSQMYSKRIPIPAFADRIGQYVQAHTLYNSVRPFGVSAIFGGIDDEGSHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                        A GSG   A +    L          AR+A+  AA I +Y
Sbjct: 151 IEPSGSYWGYKGAAAGSGRQIAKTELEKLFDKNPDGLS-AREAIKQAARI-IY 201


>gi|55588170|ref|XP_513795.1| PREDICTED: proteasome subunit beta type-4 isoform 3 [Pan
           troglodytes]
 gi|332810278|ref|XP_003308427.1| PREDICTED: proteasome subunit beta type-4 [Pan troglodytes]
          Length = 264

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220


>gi|167998983|ref|XP_001752197.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696592|gb|EDQ82930.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 273

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 12/167 (7%)

Query: 7   KHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           KH        T++L V+    V++A D   S G TV   + ++++ +GK   + G +G  
Sbjct: 49  KHTKYPYVTGTSVLGVKYKDGVLLASDTAASYGSTVRYKSVQRLKAVGKTTAL-GASGEI 107

Query: 66  ADAFTLLERL-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------K 115
           +D   + E L +     Y      +   +     +++  Y R  +   L           
Sbjct: 108 SDFQAINELLDQLITNDYMWDDGNNLGPVEIHNYLNRLMYGRRNKFDPLWNSLVLGGVKN 167

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
               +       +   +  +A G G   A    R       + EE  
Sbjct: 168 GQQYLGVVTMIGVHYVDDHVATGFGNHLARPIFRDEWRADMTHEEAV 214


>gi|41352685|gb|AAS01049.1| putative proteasome 20S beta1.1 subunit [Brassica napus]
          Length = 172

 Score = 69.2 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 35  VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELA 94
            S G  V    + K+ +L     +   +GS+AD+  + + +   L Q+  QL + +    
Sbjct: 1   TSTGMYVANRASDKITQLTDNVYVC-RSGSAADSQVVSDYVRYFLHQHTIQLGQPATVKV 59

Query: 95  KDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE--------PENGVMAIGSGGSYALS 146
               + + L      +L     +       G  +          E      GSG SY   
Sbjct: 60  SAN-LIRMLAYNNKNMLQTGLIVGGWDKYEGGRIYGIPLGGTVVEQPFAIGGSGSSYLYG 118

Query: 147 AARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                     +   AE++  KA+S+A      +   +    +   
Sbjct: 119 FFDQAWKENMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSE 163


>gi|22538467|ref|NP_002787.2| proteasome subunit beta type-4 [Homo sapiens]
 gi|116242733|sp|P28070|PSB4_HUMAN RecName: Full=Proteasome subunit beta type-4; Short=Proteasome beta
           chain; AltName: Full=26 kDa prosomal protein;
           Short=HsBPROS26; Short=PROS-26; AltName: Full=Macropain
           beta chain; AltName: Full=Multicatalytic endopeptidase
           complex beta chain; AltName: Full=Proteasome chain 3;
           Short=HsN3; Flags: Precursor
 gi|55960547|emb|CAI16806.1| proteasome (prosome, macropain) subunit, beta type, 4 [Homo
           sapiens]
 gi|208967170|dbj|BAG73599.1| proteasome (prosome, macropain) subunit, beta type 4 [synthetic
           construct]
          Length = 264

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220


>gi|150400619|ref|YP_001324385.1| proteasome subunit alpha [Methanococcus aeolicus Nankai-3]
 gi|150013322|gb|ABR55773.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
          Length = 271

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 67/198 (33%), Gaps = 23/198 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++  G V++A D ++ + + + K +  K+  + +  + A     +     +  
Sbjct: 35  RGTTAIGIKYSGGVILAVDRRI-MSKLIEKYSVEKIFHIDEHIMAASSGLIADARILVDR 93

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++ +       +   L+K     K                +I   D+  + +   
Sbjct: 94  ARVEAQINKITYGEPMTVEALSKKICDIKQAYTQHGGSRPFGISLLIAGIDRHNSKLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA------------D 171
                  E    AIG G   A+           S EE    A+   +            D
Sbjct: 154 DPSGALIEYKATAIGFGRPSAMEILEEKYDENISREEALELALYALSKSSNMALLPENID 213

Query: 172 ICVYTNHNIVLETLKVGD 189
           + + T+   V++ L+  +
Sbjct: 214 MAIITDDEKVVKKLQFEE 231


>gi|229365758|gb|ACQ57859.1| Proteasome subunit beta type-9 precursor [Anoplopoma fimbria]
          Length = 159

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +R +G VV+  D +VS G +V+     K+  L    I    +GS+ADA T+ E 
Sbjct: 17  GTTIIAIRFNGGVVLGSDSRVSAGASVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEV 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE 107
           +  +L+ +  ++       +    +       +
Sbjct: 76  VNYQLDVHSVEIDEDPQVRSAASLVRNISYKYK 108


>gi|29841419|gb|AAP06451.1| similar to NM_011971 proteasome (prosome, macropain) subunit, beta
           type 3 in Mus musculus [Schistosoma japonicum]
          Length = 209

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 54/177 (30%), Gaps = 14/177 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + + ++ +       IA D +  +    +  +  KV  LG    + GF G + D  T+ +
Sbjct: 7   NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYV-GFPGLATDNQTVFQ 65

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMI-------LIADKTITLVITGM 124
           RL+ +   Y  +  R+         +    Y R             +    +   V    
Sbjct: 66  RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
               +   N  +  G+           L      ++E+     + +  A +    + 
Sbjct: 126 LIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAISG 182


>gi|225713992|gb|ACO12842.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
 gi|290463059|gb|ADD24577.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
          Length = 205

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 64/190 (33%), Gaps = 14/190 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           ++ + +L ++ +  V IA D +  + +  +  +  K   +G G  + G AG + D  T+ 
Sbjct: 6   INGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTFEMGPGLFV-GLAGLATDIQTVQ 64

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITLVITG 123
           ++L  +++ +  +  R          +   L          +         +    + + 
Sbjct: 65  QKLNFRMKMFELREGRKMRPNTFSTMLSHLLYERRFGPFFVNPIVAGYDYVENKPFISSM 124

Query: 124 MG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHN 179
                +      +A G+     +    AL     + EE+     +A+  + D        
Sbjct: 125 DLIGAITIPEDFVAAGTSEDSLMGMCEALWFENMNPEELFEATSQAIMNSFDRDSLAGWG 184

Query: 180 IVLETLKVGD 189
             +  ++   
Sbjct: 185 AEVHIIEKHQ 194


>gi|332220284|ref|XP_003259287.1| PREDICTED: proteasome subunit beta type-4-like isoform 1 [Nomascus
           leucogenys]
 gi|332220286|ref|XP_003259288.1| PREDICTED: proteasome subunit beta type-4-like isoform 2 [Nomascus
           leucogenys]
          Length = 264

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220


>gi|77735487|ref|NP_001029438.1| proteasome subunit beta type-4 precursor [Bos taurus]
 gi|108860906|sp|Q3T108|PSB4_BOVIN RecName: Full=Proteasome subunit beta type-4; Flags: Precursor
 gi|74267624|gb|AAI02183.1| Proteasome (prosome, macropain) subunit, beta type, 4 [Bos taurus]
 gi|296489544|gb|DAA31657.1| proteasome subunit beta type-4 precursor [Bos taurus]
          Length = 264

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 65/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L ++ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERLEKKL---------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L + +           Y  + + S +  A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|17546321|ref|NP_519723.1| hypothetical protein RSc1602 [Ralstonia solanacearum GMI1000]
 gi|17428618|emb|CAD15304.1| putative peptidase t1a, proteasome beta-subunit; protein [Ralstonia
           solanacearum GMI1000]
          Length = 191

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 15/189 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + V+KDG V IA D  V+ G T +      N +  +       +AG         +L
Sbjct: 2   TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTAHFPVMRSL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVIT 122
           L  L  +        +  +     +   D+Y              + I       T +  
Sbjct: 62  LAGLADECRLGSRDDVFRTFLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANPTGIYG 121

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNI 180
                 +   +    IGSG ++AL A  A+      +A +IA+  ++   +    +   I
Sbjct: 122 VYSYREVFAFDRFWGIGSGRNFALGAMSAVYDLPGRTAADIAQVGVAAGVEFDKSSGGPI 181

Query: 181 VLETLKVGD 189
            + T+++ D
Sbjct: 182 EVHTVRLQD 190


>gi|83745858|ref|ZP_00942915.1| hypothetical protein RRSL_04527 [Ralstonia solanacearum UW551]
 gi|207742988|ref|YP_002259380.1| peptidase t1a, proteasome beta-subunit; protein [Ralstonia
           solanacearum IPO1609]
 gi|83727548|gb|EAP74669.1| hypothetical protein RRSL_04527 [Ralstonia solanacearum UW551]
 gi|206594385|emb|CAQ61312.1| peptidase t1a, proteasome beta-subunit; protein [Ralstonia
           solanacearum IPO1609]
          Length = 191

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 15/189 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + V+K G V IA D  V+ G T +      N +  +       +AG         +L
Sbjct: 2   TTCVVVKKGGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTAHFPVMRSL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVIT 122
           L  L  +        +  +     +   D+Y              + I       T +  
Sbjct: 62  LAGLADECRLGTRDDVFRTFLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANPTGIYG 121

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNI 180
                 +   +    IGSG ++AL A  A+      +A ++A+  +S   +    +   I
Sbjct: 122 VYSYREVFSFDRFWGIGSGRNFALGAMSAVYDLPGRTAVDVAQAGVSAGVEFDKSSGGPI 181

Query: 181 VLETLKVGD 189
            + T+++ D
Sbjct: 182 EVHTVRLQD 190


>gi|48145757|emb|CAG33101.1| PSMB4 [Homo sapiens]
          Length = 264

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220


>gi|82802840|gb|ABB92464.1| rcPSMB3 [Homo sapiens]
          Length = 204

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 61/193 (31%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ ++    V IA D    +   ++  + +++  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------I 121
             + + L+ +L  Y  +  +          +  +L          D  I  +        
Sbjct: 61  QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120

Query: 122 TGMGDVL---EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVY 175
           +   D++      +  +  GS          +L       E   E    AM  A D    
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAG 180

Query: 176 TNHNIVLETLKVG 188
           +   +++   K  
Sbjct: 181 SGMGVIIHITKKD 193


>gi|332220288|ref|XP_003259289.1| PREDICTED: proteasome subunit beta type-4-like isoform 3 [Nomascus
           leucogenys]
          Length = 261

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220


>gi|294495468|ref|YP_003541961.1| proteasome endopeptidase complex, subunit alpha [Methanohalophilus
           mahii DSM 5219]
 gi|292666467|gb|ADE36316.1| proteasome endopeptidase complex, alpha subunit [Methanohalophilus
           mahii DSM 5219]
          Length = 256

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 14/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT   ++    VV+  D +++    +   +  K+ ++ +   +A     +     +  
Sbjct: 34  RGTTAAGIKARDGVVLLVDKRITS-HLIEAESIEKIFQIDEHIGVATSGLVADARALVDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++         S   L+K     K                +I   D +I  +   
Sbjct: 93  ARVEAQVNVVSYDEPISVDVLSKKICDHKQTYTQYGGVRPYGTALLIAGVDGSIPKLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
                  E    AIG+G +  +           + +E   +  +A+  A+D+
Sbjct: 153 DPSGAMLEYKATAIGAGRNAFMEVFEEQYKEDMNLDEAIMLGMEALYNASDM 204


>gi|146423308|ref|XP_001487584.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 280

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 16/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    V++  + + +L     +    K+ ++    ++A FAG +ADA  L++
Sbjct: 60  RGTCAVGVKGKDCVILGCEKRTTLKLQDPRITPSKICKVDNHALLA-FAGLNADARILVD 118

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   L  +         +A   +       +    +        A+ T+  +
Sbjct: 119 KARVEAQSHRLTLEDAVTIEYLTKYVAGVQQKYTQSGGVRPFGIATLIAGFDANDTVPRL 178

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-N 179
                  +       AIG                  + E+  +  +    ++ V T   N
Sbjct: 179 YQTEPSGVYNSWKAHAIGRSSKTVREFLEKNYEEDMNDEQTIKLTIKSLLEV-VQTGAKN 237

Query: 180 IVLETLKVGDE 190
           I +  LK  D+
Sbjct: 238 IEVAVLKANDQ 248


>gi|196475700|gb|ACG76409.1| proteasome subunit beta type-4 precursor (predicted) [Otolemur
           garnettii]
          Length = 261

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 17/175 (9%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+ +G VVIA D   S G      N  ++ ++    ++ G +G  AD 
Sbjct: 48  NPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMKVNDSTML-GASGDYADF 105

Query: 69  FTLLERLEKKL---------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-IT 118
             L + L + +           Y  + + S +  A   R  K       M++       +
Sbjct: 106 QYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGES 165

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
            +       +  E   +A G G   A    R ++      +Q  A+E+  + M +
Sbjct: 166 FLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEAQELVERCMRV 220


>gi|145611508|ref|XP_368913.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145018784|gb|EDK03063.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 271

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 57/170 (33%), Gaps = 21/170 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VVIA D   S G     ++  ++R     +++ GF G  +D   L   
Sbjct: 40  GTSVVGLKFKDGVVIAADNLASYGSLARFSSTHRLRSFANSSVV-GFGGDVSDMQYLDRH 98

Query: 75  LEK------------KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-------- 114
           L +            +  +       ++  L K      Y R  +   L           
Sbjct: 99  LNELAIDEAYANPADESTESSRDSSLNAQNLHKYLSKLLYGRRNKFDPLWNQILVAGLDA 158

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                + +            +A G G   A+   R  + ++  A +++R+
Sbjct: 159 DDKPFLASADLLGTTFSAPALASGYGSMLAIPIMRRAVPSEEEAAKLSRE 208


>gi|119590978|gb|EAW70572.1| hCG1644450 [Homo sapiens]
          Length = 205

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 61/193 (31%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ ++    V IA D    +   ++  + +++  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAIMAMKGKNRVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-------I 121
             + + L+ +L  Y  +  +          +  +L          D  I  +        
Sbjct: 61  QRVAQCLKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPF 120

Query: 122 TGMGDVL---EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVY 175
           +   D++      +  +  GS          +L       E   E    AM  A D    
Sbjct: 121 SCSLDLIGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAG 180

Query: 176 TNHNIVLETLKVG 188
           +   +++   K  
Sbjct: 181 SGMGVIIHITKKD 193


>gi|302309933|ref|XP_451153.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|199424771|emb|CAH02741.2| KLLA0A03487p [Kluyveromyces lactis]
          Length = 275

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 17/175 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +T L ++ +  VV+A +  ++    V   N +   +    +I   ++G   D   L+ 
Sbjct: 33  NGSTSLGIKCEDGVVLAVEKLITSKLLVPGKNKKI--QTVDRHIGCVYSGLMPDGRHLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++   +           A   R+ +Y+             + A+    D     +  
Sbjct: 91  RGREEAASFKKMYSTPIPIPAFADRVGQYVQAHTLYNSVRPFGVTAIFGGVDSDGAHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARAL--MSTQNSAEEIARKAMSI--AADIC 173
                        A G G   A +    L   +   +A E  ++A  I  AA   
Sbjct: 151 LEPSGTYWGYKSAATGKGRQSAKAELEKLSNKNPNLTAREAVKEAARIIYAAHED 205


>gi|195497298|ref|XP_002096040.1| GE25292 [Drosophila yakuba]
 gi|194182141|gb|EDW95752.1| GE25292 [Drosophila yakuba]
          Length = 268

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++L +R D  V++A D  VS G      N  +V ++ K  ++ G +G  AD  ++   
Sbjct: 57  GSSVLGIRYDEGVMLAADTLVSYGSLARYQNIERVFKINKNILLGG-SGDFADIQSIKRN 115

Query: 75  LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITG 123
           +++K+ +     + +      LA       Y R      L  D        +    +   
Sbjct: 116 IDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANV 175

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
                  E+ V+A G     A+   R             A E+ R  M +
Sbjct: 176 DLRGRSHEDYVVATGFARHLAIPLVREKKPKDRDFTVVEAAELIRTCMEV 225


>gi|164656022|ref|XP_001729139.1| hypothetical protein MGL_3606 [Malassezia globosa CBS 7966]
 gi|159103029|gb|EDP41925.1| hypothetical protein MGL_3606 [Malassezia globosa CBS 7966]
          Length = 270

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 62/200 (31%), Gaps = 18/200 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG---FA 62
                + +  T++L +     V++A D   S G      N +++ + G+  +I      +
Sbjct: 44  HTQQPI-VTGTSVLGLTYKDGVMLATDTLASYGSLARFMNIQRLAQFGERVVIGASGDMS 102

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIAD 114
                  +L + +EK+  +     L  +   A   R        +D Y   L        
Sbjct: 103 DWQNIRHSLTKLMEKEEMESDGHTLTPAQMYAYLSRTMYERRSKLDPYWNALVLGGFDTK 162

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSI 168
                +          ++  +A G G   A    R  +       T+N A  I  + M +
Sbjct: 163 TNAPFLGYVDLLGTTYQSSTIATGFGLHLAQPMLRKAVEGRETHLTENDARAILEECMRV 222

Query: 169 AADICVYTNHNIVLETLKVG 188
                  + +   +  +   
Sbjct: 223 LFYRDARSLNRFQIAKITAD 242


>gi|226502282|ref|NP_001148542.1| LOC100282158 [Zea mays]
 gi|195620210|gb|ACG31935.1| proteasome subunit beta type 2 [Zea mays]
          Length = 211

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 47/154 (30%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L V     V++A D        V K +  KV  L     + G +G   D     E ++K
Sbjct: 4   VLGVVGRDFVLVAADTSAVQSILVHKTDEDKVMVLDSQK-LMGASGEPGDRVQFTEFIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            L  Y  +        A            + K    +  ++   DK +   +        
Sbjct: 63  NLHLYQFRNTIPLSTAAAANFTRGELATALRKNPYMVNIILGGYDKDVGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  + LS    L     + EE  
Sbjct: 123 LHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAV 156


>gi|297663654|ref|XP_002810285.1| PREDICTED: proteasome subunit beta type-4-like [Pongo abelii]
          Length = 264

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 220


>gi|190345051|gb|EDK36863.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 280

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 16/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    V++  + + +L     +    K+ ++    ++A FAG +ADA  L++
Sbjct: 60  RGTCAVGVKGKDCVILGCEKRTTLKLQDPRITPSKICKVDNHALLA-FAGLNADARILVD 118

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   L  +         +A   +       +    +        A+ T+  +
Sbjct: 119 KARVEAQSHRLTLEDAVTIEYLTKYVAGVQQKYTQSGGVRPFGIATLIAGFDANDTVPRL 178

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-N 179
                  +       AIG                  + E+  +  +    ++ V T   N
Sbjct: 179 YQTEPSGVYNSWKAHAIGRSSKTVREFLEKNYEEDMNDEQTIKLTIKSLLEV-VQTGAKN 237

Query: 180 IVLETLKVGDE 190
           I +  LK  D+
Sbjct: 238 IEVAVLKANDQ 248


>gi|195111662|ref|XP_002000397.1| GI10207 [Drosophila mojavensis]
 gi|193916991|gb|EDW15858.1| GI10207 [Drosophila mojavensis]
          Length = 266

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 17/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++L +R DG V++A D  VS G      N  +V ++    I+ G  G  AD  ++   
Sbjct: 55  GSSVLGIRFDGGVLVAADTLVSYGSLARYQNIERVFQI-NNKILLGGGGDFADIQSIKRS 113

Query: 75  LEKKL-EQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD--------KTITLVITG 123
           +++K+ E                  + +  Y R      L  D             +   
Sbjct: 114 IDQKMIEDQCCNDGVVMKPAELSSWLTRVLYNRRCRMNPLYIDVVVGGVDEAGKPFLGNV 173

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARKAMSI 168
                  ++ V+A G G   AL   R             A  + R++M +
Sbjct: 174 DLRGRAYDDYVVATGFGRHLALPLVRERKPKDREFTFEEATSLIRESMKV 223


>gi|156382256|ref|XP_001632470.1| predicted protein [Nematostella vectensis]
 gi|156219526|gb|EDO40407.1| predicted protein [Nematostella vectensis]
          Length = 262

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 24/193 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L ++ +G V++A D   S G      N  ++ R+ +  II G AG  AD   +   
Sbjct: 51  GTSVLGIKFNGGVLMAADTLGSYGSLARYRNISRLMRVNENTII-GAAGDYADFQYIKSV 109

Query: 75  LEKK------LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLV 120
           LE+K      L        +S       W              + +        K  + +
Sbjct: 110 LEQKVIDDACLADGHGYTPKSIF----SWLTRTMYYRRTKFDPLWNQIIVGGIEKGESFL 165

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEE---IARKAMSIAADICVY 175
                  +  E   +A G G   A    R     +   S EE   +  + + +       
Sbjct: 166 GFVDKIGIAYEAPTLASGFGAYLAQPLLRDAYEKNPNMSEEEARKLLVECLKVLFYRDGR 225

Query: 176 TNHNIVLETLKVG 188
           + +   +  +   
Sbjct: 226 SLNRFEIAVITKD 238


>gi|123296529|emb|CAM26266.1| proteasome (prosome, macropain) subunit beta type 9 (large
           multifunctional protease 2) [Homo sapiens]
 gi|168983777|emb|CAQ08909.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985350|emb|CAQ08498.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
          Length = 131

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 7/132 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + +    +
Sbjct: 1   MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHEHIYCA-LSGSAADAQAVADMAAYQ 59

Query: 79  LEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPEN 132
           LE +  +L    + LA          KY  +L A +++A  D+     + G    +    
Sbjct: 60  LELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGMLTRQ 119

Query: 133 GVMAIGSGGSYA 144
                GSG ++ 
Sbjct: 120 PFAIGGSGSTFI 131


>gi|71420498|ref|XP_811505.1| proteasome alpha 2 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70876176|gb|EAN89654.1| proteasome alpha 2 subunit, putative [Trypanosoma cruzi]
          Length = 231

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    VVIA + + +          +KV  L    +   ++G   D   L++
Sbjct: 29  KGTTALGVKAMDGVVIAAEKKTTS-PLAASLTVQKVFVLDDH-VGCTYSGIGPDCRVLVD 86

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVIT 122
              K  ++Y           QL+R    L +++     +R     +L+  AD     +  
Sbjct: 87  AARKACQKYRLTYHEPMPVSQLVRHISSLYQEFTQSGGVRPFGCSLLVAGADSQGNHLYQ 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        +IG G + A +      + +   E+    A+
Sbjct: 147 VDPSGTFWAWKATSIGKGSTDAKTFLEKRYTNEMEIEDAVHTAL 190


>gi|225459611|ref|XP_002285872.1| PREDICTED: similar to PBC1 (20S proteasome beta subunit C1);
           peptidase isoform 2 [Vitis vinifera]
          Length = 174

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 52/168 (30%), Gaps = 25/168 (14%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
              + + + ++ +       IA D +  +    +  + +K+ R+     + G +G + DA
Sbjct: 2   SIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFL-GLSGLATDA 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            TL +RL  + + Y  +  R          +   L                         
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKR--------------------- 99

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADIC 173
           E     +  G+       A  A+       E   EI  +A+  + D  
Sbjct: 100 ELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRD 147


>gi|242033305|ref|XP_002464047.1| hypothetical protein SORBIDRAFT_01g011260 [Sorghum bicolor]
 gi|241917901|gb|EER91045.1| hypothetical protein SORBIDRAFT_01g011260 [Sorghum bicolor]
          Length = 210

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L V      V+A D        V K +  KV  L     + G +G   D     E ++K
Sbjct: 4   VLGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHK-LMGASGEPGDRVQFTEFIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            L  Y  +        A            + K    +  ++   DK +   +        
Sbjct: 63  NLHLYQFRNTIPLSTAAAANFTRGELATALRKNPYMVNIILGGYDKDVGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  + LS    L     + EE  
Sbjct: 123 LHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEAV 156


>gi|194765170|ref|XP_001964700.1| GF23325 [Drosophila ananassae]
 gi|190614972|gb|EDV30496.1| GF23325 [Drosophila ananassae]
          Length = 265

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 65/170 (38%), Gaps = 17/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ +R D  V++A D  VS G      N  ++  +   NI+ G  G  AD  +++  
Sbjct: 54  GSSVIGIRFDKGVMMAADTLVSYGSLARYQNMERIFMI-NNNILFGGCGDFADIQSIIRG 112

Query: 75  LEKKLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITG 123
           +E+K+ +     + +      L +      Y R  +   L+ D        +    +   
Sbjct: 113 IEQKIVEDQCNGDDIEMKPKALGQWMTRVLYDRRTQMNPLLVDVVLGGLDVQGKPYLANV 172

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARKAMSI 168
                  ++ V+A G      +   R+          + A E+ +++M I
Sbjct: 173 DLRGRSHDDFVIATGFARHLTIPFIRSAKPKDRDFNMDEAHEMIKRSMQI 222


>gi|255712962|ref|XP_002552763.1| KLTH0D00902p [Lachancea thermotolerans]
 gi|238934143|emb|CAR22325.1| KLTH0D00902p [Lachancea thermotolerans]
          Length = 277

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 15/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    +V+A +  V+    V   N +        ++   ++G   D   L+ 
Sbjct: 33  NGATSVGMKFKDGIVLAVEKLVTSKLLVPGKNKKIQTI--DRHVGCAYSGLMPDGRHLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++   +           A   R+ +Y+             + A++   D     +  
Sbjct: 91  RGREEASSFKKTYATPIPLPALADRLGQYVQAHTLYNSVRPFGITAIVGGVDDDGAHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSI 168
                        A G G   A +    ++    +  A E  ++A  I
Sbjct: 151 LEPSGTYWGYKGAATGKGRQSAKAELEKVISNKPELDAREAVKEAARI 198


>gi|51847755|gb|AAU10515.1| 20S proteasome alpha 2 subunit [Leishmania donovani]
          Length = 231

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    VVIA   + +    V  ++ +KV  L +  +   ++G   D   L++
Sbjct: 29  KGTTALGVKATDGVVIAA-KRKAPSTLVDASSIQKVFVLDEH-VGCTYSGMGPDCRVLID 86

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
              K  +QY           QL+R    L +++     +R     +L+A  D     +  
Sbjct: 87  SARKNCQQYRLMYNESIPISQLVRKISALYQEFTQSGGVRPFGCSLLVAGVDANGYHLYQ 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG+G   A +      +     E+    A+
Sbjct: 147 VDPSGTFWAWKATAIGTGSPDAKAFLEKRYTVDMELEDAVHTAL 190


>gi|183233581|ref|XP_001913879.1| calcium-dependent protein kinase 2 [Entamoeba histolytica
           HM-1:IMSS]
 gi|169801508|gb|EDS89346.1| calcium-dependent protein kinase 2, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 413

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 15/166 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           ++L ++ +G V+IA D   S G   +  +  +V +LGK  IIAG +G  +D   L E L+
Sbjct: 209 SVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYTIIAG-SGEYSDFIELNETLQ 267

Query: 77  KK------LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMG 125
           KK       E   N    S +       + K+  + + + +        K    +     
Sbjct: 268 KKVNGDECCEGKENGYKPSELYSYAQRILYKHRCDQKPLFVTLIVGGVKKDEIFLGQTDM 327

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
                    +A G G   A+   R       S   AE +  + M I
Sbjct: 328 YGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIERCMKI 373


>gi|255717565|ref|XP_002555063.1| KLTH0G00550p [Lachancea thermotolerans]
 gi|238936447|emb|CAR24626.1| KLTH0G00550p [Lachancea thermotolerans]
          Length = 265

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 72/206 (34%), Gaps = 24/206 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                 + +  T++++++    V+IA D   S G  +  ++  ++  +G+  ++ G +G 
Sbjct: 32  MHTQQPI-VTGTSVISMKYKDGVIIAADRLGSYGSLLRFSDVERLFPVGRNTVV-GISGD 89

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKD-------------WRMDKYLRNLEAMIL 111
            +D   L   L++   +       +  E A                R  K      A+I+
Sbjct: 90  ISDMQHLENLLDEMQTENNYDNEYAEDEEALKPSYVFEYLANVMYNRRSKMNPLWNALIV 149

Query: 112 IADKT-ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--------NSAEEIA 162
              +     +       +      +A G G   AL   R ++ ++          AE+  
Sbjct: 150 AGLEDGKPFLKYVNLLGVTYSAPSLATGFGAHLALPLLRKIVDSESDVKKTSAEDAEKSI 209

Query: 163 RKAMSIAADICVYTNHNIVLETLKVG 188
           ++AM +       ++ N  +  +   
Sbjct: 210 KEAMKVLFYRDARSSRNYSIAIVDSK 235


>gi|258564632|ref|XP_002583061.1| proteasome subunit beta type 4 [Uncinocarpus reesii 1704]
 gi|237908568|gb|EEP82969.1| proteasome subunit beta type 4 [Uncinocarpus reesii 1704]
          Length = 352

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 3/106 (2%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           +  A  +  T++L V+ +G V IA D   S G      + +++R     +++ GF G  +
Sbjct: 203 RTQAPTVTGTSVLAVKFNGGVAIAADNLASYGSLARFQDVKRLRTFDNSSVV-GFGGDVS 261

Query: 67  DAFTLLERLEK--KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
           D   +   L      E Y +    +         + K      +  
Sbjct: 262 DMQYIDRILNSLDIRENYSSYGQHTLNAKNLHTYLSKMFYKRRSDF 307


>gi|299066611|emb|CBJ37801.1| putative hydrolase, proteasome hslV type peptidase domain
           [Ralstonia solanacearum CMR15]
          Length = 191

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 15/189 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + V+KDG V IA D  V+ G T +      N +  +       +AG         +L
Sbjct: 2   TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGESLIALAGTTAHFPVMRSL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVIT 122
           L  L  +        +  +     +   D+Y              + I       T +  
Sbjct: 62  LAGLADECRLGSRDDVFRTFLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIVNPTGIYG 121

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNI 180
                 +   +    IGSG ++AL A  A+      +A +IA+  ++   +    +   I
Sbjct: 122 VYSYREVFAFDRFWGIGSGRNFALGAMSAVYDMPGRTAADIAQVGVAAGVEFDKSSGGPI 181

Query: 181 VLETLKVGD 189
            + T+++ D
Sbjct: 182 EVHTVRLQD 190


>gi|281211377|gb|EFA85542.1| proteasome subunit beta type 4 [Polysphondylium pallidum PN500]
          Length = 258

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 13/158 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ ++ +G VV+  D   S G      N ++V++ G    I G++G  +D  ++ + 
Sbjct: 43  GSSVIAIKYNGGVVMGCDTLCSYGSLARFNNIQRVKQFGP-KTIVGYSGEHSDFQSITQL 101

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD---------KTITLVIT 122
           L +  ++                  + +  Y R  +   L  +            + +  
Sbjct: 102 LDDLVIDDQCIDDKSQLSTEEIWNYLARVLYNRRNKVDPLWNNLVVMGFDKKTDKSFLGK 161

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   ++  +A G G   AL   R   S   + E+
Sbjct: 162 VDLYGTCFKDDYIATGYGQHIALPLLRKAYSPDMTLEQ 199


>gi|328861198|gb|EGG10302.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
          Length = 269

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 20/171 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+  G V++A D   S G      + +++  +G+  ++ G  G  +D   + + 
Sbjct: 50  GTSVLGVKYKGGVMLAADMLASYGSLARFKDIQRLIPVGEHTVV-GAGGDLSDFQYVKKM 108

Query: 75  LEKKLEQ-------YPNQLLRSSVELAK--DWRMDKYLRNLEAM---ILIADKTITLVIT 122
           LE ++ +       +     +    LA+    R  K      +     +        +  
Sbjct: 109 LEARMVEETLADDGHVLTTSQIFEYLARVMYNRRSKVNPLWNSFVVGGVEGRTGEPFLSY 168

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMS 167
                    +  +A G G   A    R ++           A ++ARK + 
Sbjct: 169 VDLLGTTYSSPSIATGYGSYIAQPMLRKVIDDLPNGCNDLEA-DVARKTLE 218


>gi|309782585|ref|ZP_07677308.1| 20S proteasome [Ralstonia sp. 5_7_47FAA]
 gi|308918676|gb|EFP64350.1| 20S proteasome [Ralstonia sp. 5_7_47FAA]
          Length = 190

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 68/189 (35%), Gaps = 15/189 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + V+KDG V IA D  V+ G T +      N +  +       +AG         +L
Sbjct: 2   TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGDSLIALAGTTAHFPVMRSL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVIT 122
           L  L  +        +  +     +   D+Y              + I       T +  
Sbjct: 62  LTGLADECRLGTRDDVFRTFLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANATGIYG 121

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNI 180
                 +   +    IGSG ++AL A  A+      SA ++A+  +S   +    +   I
Sbjct: 122 VYSYREVFSFDRFWGIGSGRNFALGAMSAVFDMPGKSAADVAQVGVSAGVEFDKSSGGPI 181

Query: 181 VLETLKVGD 189
            + T+++ D
Sbjct: 182 EVHTVRLQD 190


>gi|307353112|ref|YP_003894163.1| proteasome endopeptidase complex subunit alpha [Methanoplanus
           petrolearius DSM 11571]
 gi|307156345|gb|ADN35725.1| proteasome endopeptidase complex, alpha subunit [Methanoplanus
           petrolearius DSM 11571]
          Length = 252

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 65/192 (33%), Gaps = 21/192 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + V+    VV+  D +VS  + + +++  K+ ++     +A  +G   DA  L++
Sbjct: 36  RGTTAVGVKCSDGVVLIVDKRVST-KLLEQSSIEKIFKVDDHIAVA-SSGLVGDARALVD 93

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIAD--KTITLVIT 122
           R   + +              L +   +  +        R     +LIA     +  +  
Sbjct: 94  RARVESQVNRVTYNESIDVETLSKKICDHMQTLTQYGGARPYGTALLIAGISDGVPRLFE 153

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD--ICVYTN 177
                   E    AIG+G    +               A  +  KA+  A +    V   
Sbjct: 154 TDPSGTLLEYKASAIGTGRPAVMKVFEEDYQEDMKIVEAIPMGLKALHAATEGKFDV--- 210

Query: 178 HNIVLETLKVGD 189
           +N+ +  +   D
Sbjct: 211 NNVEIGVIGTED 222


>gi|157869166|ref|XP_001683135.1| proteasome alpha 2 subunit [Leishmania major strain Friedlin]
 gi|68224018|emb|CAJ05080.1| putative proteasome alpha 2 subunit [Leishmania major strain
           Friedlin]
          Length = 231

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    VVIA   +      V  ++ +KV  L +  +   ++G   D   L++
Sbjct: 29  KGTTALGVKATDGVVIAAKKKAPS-TLVDASSIQKVFILDEH-VGCTYSGMGPDCRVLID 86

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
              K  +QY           QL+R    L +++     +R     +L+A  D     +  
Sbjct: 87  SARKNCQQYRLMYNEPIPISQLVRKISALYQEFTQSGGVRPFGCSLLVAGVDANGYHLYQ 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG+G   A +      +     E+    A+
Sbjct: 147 VDPSGTFWAWKATAIGTGSPDAKAFLEKRYTVDMELEDAVHTAL 190


>gi|307105231|gb|EFN53481.1| hypothetical protein CHLNCDRAFT_25653 [Chlorella variabilis]
          Length = 225

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 57/172 (33%), Gaps = 14/172 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L +     V++A D   + G T    +  ++R++    ++ G +G  +D   ++  
Sbjct: 10  GTSMLGITYKDGVLLASDTLGAYGSTKRYKSFERIRKVNDVCVL-GASGELSDFQYIMRL 68

Query: 75  LEKKL-EQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGDVLEP- 130
           LE+   + +                + +  Y R  +   L     +     G   +    
Sbjct: 69  LEELSDDDFCMDDGHHLKPAEVHSYLCRVLYNRRNKFDPLWNSLVVGGFYAGQPFLGTVG 128

Query: 131 ------ENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADIC 173
                  +  +A G G   A    R       S E   E+ R+ + +     
Sbjct: 129 MIGTNYTDVHLATGFGNHLARPLMREKHRPDMSEEEATELMRECLKVCYYRD 180


>gi|82802844|gb|ABB92466.1| rcPSMB3 [Gorilla gorilla]
          Length = 204

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 62/193 (32%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ ++    V IA D    +   ++  + +++  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAIMAMKGKNCVAIAADRHFGIQAQMVTTDFQEIFPMGGWLYI-GLAGLATDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSS-----VELAKDWRMDKYLRNLEAMILIADKT----ITL 119
            T+ + L+ +L  Y  +  +         +  +   +K+        +IA          
Sbjct: 61  QTVAQCLKFRLNLYELKEGQQIKPYTFTSMVANPLYEKHFGPYYTEPVIAGLDLKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
             +          +  +  GS          +L       E +     +AM  A D    
Sbjct: 121 SCSLDLIGCPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDWGAG 180

Query: 176 TNHNIVLETLKVG 188
           +   +++   +  
Sbjct: 181 SGMGVIIHITEKD 193


>gi|58260960|ref|XP_567890.1| endopeptidase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134116905|ref|XP_772679.1| hypothetical protein CNBK0530 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255297|gb|EAL18032.1| hypothetical protein CNBK0530 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229971|gb|AAW46373.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 280

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 64/212 (30%), Gaps = 29/212 (13%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M      + +  T++L ++ D  V+IA D   S G      + +++  LGK  ++ G AG
Sbjct: 43  MSHTQQPL-VTGTSVLGIKFDKGVMIAADNLGSYGSLARFRDIQRLHPLGKHTLL-GVAG 100

Query: 64  SSADAFTLLERLEKKLEQYP----NQLLRSSVELAKDWRMDK--YLRNLEAMILIA---- 113
             +D   L   L+  L +           S         +    Y R  +   +      
Sbjct: 101 DMSDYQWLKRELDGLLREESALSLTDSHPSLSPSNIYTLLSNLFYARRSKVDPIWNAVLV 160

Query: 114 -----DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQN 156
                 K  + +              +A G G   A    R                TQ 
Sbjct: 161 GGWDDTKKESFLAYVDLLGTTYSAPTLATGFGAHLAQPLLREAYEAKAGIDGKGPLLTQE 220

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            AE++    M +       + +   + T+   
Sbjct: 221 EAEKLIDDCMKVLFYRDARSINKYQVATITDE 252


>gi|149527047|ref|XP_001520498.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
          Length = 260

 Score = 68.5 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
              H +  +  T++L V+ DG V+IA D   S G      N  ++ R+ +  ++ G +G 
Sbjct: 39  SPGHQSPMVTGTSVLGVKFDGGVMIAADMLGSYGSLARFRNISRIMRVNETTVL-GASGD 97

Query: 65  SADAFTLLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI 121
            AD   L + +++ +   E   +    S   L        Y R  +   L     I    
Sbjct: 98  YADFQYLKQVIDQMVIDEELLGDGHSYSPKALHSWLTRAMYSRRSKMNPLWNTVVIGGFA 157

Query: 122 TGMGDVLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIA 169
            G   +          E   +A G G   A    R  +      +Q  A E+  + M + 
Sbjct: 158 DGQSFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREALEKQPVPSQAEARELVDRCMRVL 217

Query: 170 ADICVYTNHNIVLETLKVG 188
                 + +   + T+   
Sbjct: 218 YYRDARSYNRFEIATVTEK 236


>gi|302420863|ref|XP_003008262.1| proteasome component PRE3 [Verticillium albo-atrum VaMs.102]
 gi|261353913|gb|EEY16341.1| proteasome component PRE3 [Verticillium albo-atrum VaMs.102]
          Length = 364

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 8/141 (5%)

Query: 30  AGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRS 89
             D + + G  +      K+ R+           S+ D   + + ++ +L  YP +  + 
Sbjct: 94  GADSRTTTGSYIANRVTDKLTRVHDTIWCCRSVSSA-DTQAVADIVQYQLGMYPMRNRKP 152

Query: 90  SVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDVLEPENGVMAIGSGGS 142
            +                  L A ++IA         V +        +      GSG +
Sbjct: 153 PMTQTAASIFQEICYSNKDRLSAGLIIAGWDERHGGQVYSIPLGGSLHKQSYAIGGSGST 212

Query: 143 YALSAARALMSTQNSAEEIAR 163
           Y      A        +E  +
Sbjct: 213 YIYGYCDANWQESMEEKEAVK 233


>gi|187929025|ref|YP_001899512.1| 20S proteasome A and subunit Bs [Ralstonia pickettii 12J]
 gi|241663213|ref|YP_002981573.1| 20S proteasome subunits A and B [Ralstonia pickettii 12D]
 gi|187725915|gb|ACD27080.1| 20S proteasome A and B subunits [Ralstonia pickettii 12J]
 gi|240865240|gb|ACS62901.1| 20S proteasome A and B subunits [Ralstonia pickettii 12D]
          Length = 190

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 68/189 (35%), Gaps = 15/189 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKA----NARKVRRLGKGNIIAGFAGSSADAFTL 71
           TT + V+KDG V IA D  V+ G T +      N +  +       +AG         +L
Sbjct: 2   TTCVVVKKDGEVAIAADSLVTFGDTRLARGYEQNQKIFQVGDSLIALAGTTAHFPVMRSL 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVIT 122
           L  L  +        +  +     +   D+Y              + I       T +  
Sbjct: 62  LAGLADECRLGTRDDVFRTFLKVHEKLKDEYFVNTKEDDDDPYESSQITCLIANATGIYG 121

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAADICVYTNHNI 180
                 +   +    IGSG ++AL A  A+      SA ++A+  +S   +    +   I
Sbjct: 122 VYSYREVFSFDRFWGIGSGRNFALGAMSAVFDMPGKSAADVAQVGVSAGVEFDKSSGGPI 181

Query: 181 VLETLKVGD 189
            + T+++ D
Sbjct: 182 EVHTVRLQD 190


>gi|195396252|ref|XP_002056746.1| GJ10047 [Drosophila virilis]
 gi|194143455|gb|EDW59858.1| GJ10047 [Drosophila virilis]
          Length = 265

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 65/170 (38%), Gaps = 17/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ ++ DG V++A D  VS G      + ++V ++    ++ G +G  AD  ++   
Sbjct: 54  GSSVVGIKFDGGVLVAADTLVSYGSLARYQDIQRVFKINNNILLGG-SGDFADIQSIKRN 112

Query: 75  LEKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITG 123
           +++K+ +   Y + ++    ELA       Y R      L  D             +   
Sbjct: 113 IDQKMIEDQCYNDGVIMKPGELASWLTRVLYNRRSRMNPLYIDVVVGGVDETGKPFLGNV 172

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
                   + V+A G G   AL   R             A  + R++M +
Sbjct: 173 DMRGRAYNDYVVATGFGRHLALPLVRERKPKDRDFTFEEATNLIRESMKV 222


>gi|52548242|gb|AAU82108.1| 20S proteasome beta 7 subunit [Triticum aestivum]
          Length = 215

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 58/177 (32%), Gaps = 18/177 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++    V++A D   S G T+   +  +++ +GK ++I G +G  +D   +L  
Sbjct: 24  GNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGG-SGEFSDFQEILRY 82

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           L++      + L  S V                            +          E   
Sbjct: 83  LDELTRNKFDPLWNSLVLGGVKK--------------GPKGDEKYLGMVNMIGTHFEENH 128

Query: 135 MAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKVG 188
           +A G G   A+   R       + EE  +   K + +       + +   +  +   
Sbjct: 129 IATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVLLYRDRSSINKFQIAKITTE 185


>gi|74205836|dbj|BAE23215.1| unnamed protein product [Mus musculus]
          Length = 264

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ DG VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVGRCMRV 220


>gi|226532014|ref|NP_001148490.1| proteasome component2 [Zea mays]
 gi|195605760|gb|ACG24710.1| proteasome subunit beta type 2 [Zea mays]
 gi|195619760|gb|ACG31710.1| proteasome subunit beta type 2 [Zea mays]
 gi|223947157|gb|ACN27662.1| unknown [Zea mays]
          Length = 210

 Score = 68.1 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L +      V+A D        V K +  KV  L    ++ G +G   D     E ++K
Sbjct: 4   VLGLVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLL-GASGEPGDRVQFTEFIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            L  Y  +        A            + K    +  ++   DK +   +        
Sbjct: 63  NLHLYQFRNTIPLSTAAAANFTRGELATALRKNPYMVNVILGGYDKDVGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  + LS    L     + EE  
Sbjct: 123 LHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEAV 156


>gi|289740585|gb|ADD19040.1| 20S proteasome regulatory subunit beta type PSMB4/PRE4 [Glossina
           morsitans morsitans]
          Length = 273

 Score = 68.1 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 64/178 (35%), Gaps = 17/178 (9%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                +    ++++ ++ DG V+IA D  VS G      +  +V ++     I G +G  
Sbjct: 55  HAFSPI-TTGSSVVGIKFDGGVMIAADNLVSYGSLARYQDIERVFKV-NDKTIMGASGDF 112

Query: 66  ADAFTLLERLEKK-LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADK 115
           AD  +L   +++K +E   +         A    + + L N  +              D 
Sbjct: 113 ADFQSLKRSIDQKIIEDTCDDDEIIMKPKALYTWLTRILYNRRSRFNPLWLEIVVGGFDD 172

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAA-RALMSTQN----SAEEIARKAMSI 168
            +  +          E+ V+A   G   AL      L   +      A+E+ R+ M +
Sbjct: 173 GVPFLGHVDLRGRAYEDTVVATSFGKHLALPLVREKLGDKKLLTLSEAKEVLRECMEV 230


>gi|123121511|emb|CAM24980.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|123239245|emb|CAM25802.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|123291820|emb|CAM25486.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168984798|emb|CAQ08452.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985579|emb|CAQ10290.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
          Length = 131

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 7/132 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V  DG VV+  D +VS G+ V+     K+  L +    A  +GS+ADA  + +    +
Sbjct: 1   MAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCA-LSGSAADAQAVADMAAYQ 59

Query: 79  LEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPEN 132
           LE +  +L    + LA          KY  +L A +++A  D+     + G    +    
Sbjct: 60  LELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGTLGGMLTRQ 119

Query: 133 GVMAIGSGGSYA 144
                GSG ++ 
Sbjct: 120 PFAIGGSGSTFI 131


>gi|56755285|gb|AAW25822.1| unknown [Schistosoma japonicum]
          Length = 190

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 54/177 (30%), Gaps = 14/177 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + + ++ +       IA D +  +    +  +  KV  LG    + GF G + D  T+ +
Sbjct: 7   NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYV-GFPGLATDNQTVFQ 65

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMI-------LIADKTITLVITGM 124
           RL+ +   Y  +  R+         +    Y R             +    +   V    
Sbjct: 66  RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
               +   N  +  G+           L      ++E+     + +  A +    + 
Sbjct: 126 LIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAISG 182


>gi|68470589|ref|XP_720540.1| hypothetical protein CaO19.4230 [Candida albicans SC5314]
 gi|46442413|gb|EAL01702.1| hypothetical protein CaO19.4230 [Candida albicans SC5314]
          Length = 278

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 23/206 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T+++  +    V++A D   S G  +   N  ++ ++GK  ++ G +G 
Sbjct: 41  MNTQQPI-ITGTSVIASKFKNGVIMAADHVGSYGSLLRFNNIERLIKVGKETVV-GISGD 98

Query: 65  SADAFTLLERL------EKKLEQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA 113
            +D   ++  L      E+  +    + LR+             R  K      A+I+  
Sbjct: 99  ISDLQYIVRLLDELEIDEEVYDNDGGEYLRAPNVHEYLSRVLYNRRSKMNPLWNAIIVGG 158

Query: 114 DKTI--TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI--------AR 163
                   +       +      MA G G   A+   R L+       ++          
Sbjct: 159 FNKDRTPFLKYVDLLGVTYHASTMATGFGSHLAIPLLRNLIPEDKDYVKVDEQQVSKAVE 218

Query: 164 KAMSIAADICVYTNHNIVLETLKVGD 189
            +M +       +  N  +  +K+ +
Sbjct: 219 DSMRVLFYRDARSGENYSVVIIKLDE 244


>gi|329766105|ref|ZP_08257664.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137376|gb|EGG41653.1| proteasome endopeptidase complex [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 167

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 11/151 (7%)

Query: 48  KVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE 107
           K++++ +   +   AG  ADA  +++ L      +  +        +             
Sbjct: 2   KIQKIDEHAGL-TLAGGVADAQNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNR 60

Query: 108 AMILIAD-------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--- 157
               +AD            +          +   +  GSG   A            +   
Sbjct: 61  GYPFMADILVGGYDANGPALFNIDMFGSVEKKSYVTTGSGSPVAYGLLEEEYRPDLTVEE 120

Query: 158 AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           A+++A +A+  A    + T   I +  +   
Sbjct: 121 AKKVALRAVKAAIVRNIGTGDGINIAVMDKD 151


>gi|34859236|ref|XP_215842.2| PREDICTED: proteasome beta 3 subunit [Rattus norvegicus]
 gi|109470850|ref|XP_001081206.1| PREDICTED: proteasome beta 3 subunit-like [Rattus norvegicus]
          Length = 205

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 59/193 (30%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I   +    V IA D    +   ++  + +K+  +G   +    AG   D 
Sbjct: 2   SIMSYNGGAITATKGKNCVAIAADRHFRIQAQMVTTDFQKIFPMG-YRLYIDLAGLGTDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELA-----KDWRMDKYLRNLEAMILIADKTI----TL 119
            T+ + L+ +L  Y  +  +            +   +K         +IA          
Sbjct: 61  QTVAQHLKFRLNLYELKEGQQIKPYTLLSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           + +          N  +  G+          +L       E +     +AM  A D    
Sbjct: 121 ICSLDLIGCSMVTNDFVVSGTCSEQMYGMCESLWEPNVDLEHLFETISQAMLNAVDQDAM 180

Query: 176 TNHNIVLETLKVG 188
           ++  +++  ++  
Sbjct: 181 SSMGVIVHIIEKD 193


>gi|195432344|ref|XP_002064183.1| GK19842 [Drosophila willistoni]
 gi|194160268|gb|EDW75169.1| GK19842 [Drosophila willistoni]
          Length = 250

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 68/185 (36%), Gaps = 16/185 (8%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           + ++ +  H  + L +R D  ++ A +  V+    +   NA+++ ++ +  ++ G +G  
Sbjct: 31  EPNFIMATHGPSFLGIRFDKGIIFASNTLVAYYSMLRYPNAQRIFKISENILLTG-SGDF 89

Query: 66  ADAFTLLERLEKKL--EQYPNQLLRSSVELA------KDWRMDKYLRNLEAMILIADKTI 117
            D  +L   ++ K+  E+       S   +A        +R  +      AM +      
Sbjct: 90  PDIQSLKRLIDSKMIVEECYKDRKVSPRAVATWLTRILYYRRCQMDPYFVAMGVGGLDED 149

Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARAL--MSTQNSAE---EIARKAMSIAA 170
               + +        E+ V+A G     A+   R         +A    E+ R +M +  
Sbjct: 150 NTPFLASVDKRGCCYEDYVVASGFVLHMAMPMVRERKPYYRDLTAREAAELVRTSMEVVF 209

Query: 171 DICVY 175
               Y
Sbjct: 210 YRDCY 214


>gi|226478588|emb|CAX72789.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
           japonicum]
 gi|226478710|emb|CAX72850.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
           japonicum]
 gi|257206170|emb|CAX82736.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
           japonicum]
          Length = 205

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + + ++ +       IA D +  +    +  +  KV  LG    + GF G + D  T+ +
Sbjct: 7   NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYV-GFPGLATDNQTVFQ 65

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMI-------LIADKTITLVITGM 124
           RL+ +   Y  +  R+         +    Y R             +    +   V    
Sbjct: 66  RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNI 180
               +   N  +  G+           L      ++E+     + +  A +    +    
Sbjct: 126 LIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAISGWGA 185

Query: 181 VLETLKVG 188
            +  ++  
Sbjct: 186 RVYLIEKD 193


>gi|91087761|ref|XP_974991.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
 gi|270009385|gb|EFA05833.1| hypothetical protein TcasGA2_TC008617 [Tribolium castaneum]
          Length = 254

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 16/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           AT+I+ ++ +  V+IAGD   S G      N  ++ ++    I+ G  G  AD   + + 
Sbjct: 45  ATSIVAMQYNKGVIIAGDLLGSYGSLARYRNCPRIMKVNDNIIL-GAGGDYADFQYVKDI 103

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------DKTITLVITGM 124
           +E+K +++            +    + + + N  +                    + T  
Sbjct: 104 IEQKIIDEDCLDDGFKLKPKSLYCWLTRIMYNRRSKFDPFWNNFVVGGLQDGEPFLGTVD 163

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARKAMSIAADICVYTNHN 179
                  + ++  G G   A+   R  +          A  +  K M +       +   
Sbjct: 164 KLGTAYTDKIVCSGYGAYIAVPLLREALEKNPTPSKAEARALVEKCMEVLYYRDARSYPK 223

Query: 180 IVLETLKVGD 189
             + T+   D
Sbjct: 224 YQIATIDEAD 233


>gi|151944720|gb|EDN62979.1| 22.6 kDa proteasome subunit [Saccharomyces cerevisiae YJM789]
          Length = 198

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R    V++A    V+ G +V+K +  K R+L     +  FAG + D     E ++ 
Sbjct: 4   ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHT-LMSFAGEAGDTVQFAEYIQA 62

Query: 78  KLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADK--TITLVITGMGD 126
            ++ Y  +        A               +    +  +I   DK      +      
Sbjct: 63  NIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             + E    A G  G Y  S          + EE
Sbjct: 123 GTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEE 156


>gi|8671508|dbj|BAA96837.1| beta 4 subunit of 20S proteasome [Oryza sativa Japonica Group]
          Length = 212

 Score = 67.7 bits (164), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           ++ V    + V+A D        V K +  KV  L     + G +G   D     E ++K
Sbjct: 4   VIGVVGRDIAVVAADTSAVQSILVHKTDEDKVMVLDSHK-LMGASGEPGDRVQFTEFIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            L  Y  +        A            + K    +  ++   D  +   +        
Sbjct: 63  NLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  + LS    L     S EE  
Sbjct: 123 FHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAV 156


>gi|302687062|ref|XP_003033211.1| hypothetical protein SCHCODRAFT_53922 [Schizophyllum commune H4-8]
 gi|300106905|gb|EFI98308.1| hypothetical protein SCHCODRAFT_53922 [Schizophyllum commune H4-8]
          Length = 229

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 63/189 (33%), Gaps = 17/189 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L ++    +++A D   S G      + +++  +G    I G +G  +D   +   
Sbjct: 13  GTSVLALKYKDGIMLAADNLASYGSLARFKDVQRLHAVGDYTCI-GASGDMSDLQYIQGL 71

Query: 75  LEKKL-------EQYPNQLLRSSVELAKDW--RMDKYLRNLEAMILIADKT-ITLVITGM 124
           L+  +       + +          L++    R  K      ++++   K     +    
Sbjct: 72  LDSVMIDEFTAADGHTLGPKEVHEYLSQVMYARRSKMNPLWNSLLVGGYKDGERFLAYVD 131

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADICVYTNH 178
              +   +  +A G G   A    R  +       T+  AE+I    M +       + +
Sbjct: 132 LLGVTYSSSTLATGFGAYLAQPLLRKAVEGNEDTLTEQDAEKIIEDCMKVLFYRDARSLN 191

Query: 179 NIVLETLKV 187
              +  +  
Sbjct: 192 KFQIAKIDA 200


>gi|116192559|ref|XP_001222092.1| hypothetical protein CHGG_05997 [Chaetomium globosum CBS 148.51]
 gi|88181910|gb|EAQ89378.1| hypothetical protein CHGG_05997 [Chaetomium globosum CBS 148.51]
          Length = 275

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 62/208 (29%), Gaps = 35/208 (16%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VVIA D   S G      + +++R     +++ GF G  +D   L   
Sbjct: 40  GTSVIAIKFKDGVVIAADNLASYGSLARFTDVKRLRTFLSTSVV-GFGGDVSDMQFLDRH 98

Query: 75  LEK----KLEQYPNQLLRS--------------SVELAKDWRMDKYLRNLEAMILIAD-- 114
           L +    +  ++      +              +  L K      Y R  +   L     
Sbjct: 99  LNELAIDEAYEHDIVSTGAEADQPTGSAAGQLNAANLHKYLAKLMYRRRSDFDPLWNQVL 158

Query: 115 ------KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI------- 161
                 +    + +         +  +A G G   A    R   +T+  A  +       
Sbjct: 159 VAGFDAQAKPFLASVDLRGTTFTSPSLATGFGAMLAQPIMRRFAATEEDAARLTRDEAVN 218

Query: 162 -ARKAMSIAADICVYTNHNIVLETLKVG 188
             ++ M +       +     +  +   
Sbjct: 219 VVKECMKVLFYRDARSLDRYSIAVVTKD 246


>gi|170118077|ref|XP_001890221.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164634767|gb|EDQ99088.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 224

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 61/190 (32%), Gaps = 17/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L ++    +++A D   S G      + +++  +G   +I G  G  +D   +   
Sbjct: 8   GTSVLAIKYKDGIMMAADNLASYGSLARFKDIQRLHAVGSNTVI-GAGGDMSDFQYIQNM 66

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------KTITLVITGM 124
           L E  ++++  Q   +         + +  Y R  +   L               +    
Sbjct: 67  LDELMIDEFTAQDGHALGPAEIHEYLAQVLYARRTKMNPLWNSILVGGFKDGQRFLAYVD 126

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADICVYTNH 178
                     +A G G   A    R  +       T+  A EI   +M +       + +
Sbjct: 127 LLGTTYSASTLATGYGSYIAQPLLRKAVEGREDVLTEAEALEIIETSMRVLYYRDARSLN 186

Query: 179 NIVLETLKVG 188
              + T+   
Sbjct: 187 KFQVATITAE 196


>gi|195161717|ref|XP_002021708.1| GL26359 [Drosophila persimilis]
 gi|194103508|gb|EDW25551.1| GL26359 [Drosophila persimilis]
          Length = 204

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 58/190 (30%), Gaps = 17/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQ---TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              +L ++ +  V IA D ++  G      +  + +KV ++G    + G  G  AD  T+
Sbjct: 4   GGCVLAMQGNECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFL-GLTGFLADVNTV 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTITLVIT 122
            +RL+ +   Y  +        A    +   L                L        + +
Sbjct: 63  WDRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICS 122

Query: 123 GMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNH 178
                    ++  +  GS           L +     E++     + ++ A D  +    
Sbjct: 123 VDLIGAPTKKDSFVFCGSCDKQLCGMCETLWTPNLDPEQLFLTMSQTLTHAFDRNITCGW 182

Query: 179 NIVLETLKVG 188
              +  L   
Sbjct: 183 GATVFVLDKD 192


>gi|198472849|ref|XP_002133126.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
 gi|198139188|gb|EDY70528.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
          Length = 204

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 57/190 (30%), Gaps = 17/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQ---TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
              +L ++    V IA D ++  G      +  + +KV ++G    + G  G  AD  T+
Sbjct: 4   GGCVLAMQGKECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFL-GLTGFLADVNTV 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTITLVIT 122
            +RL+ +   Y  +        A    +   L                L        + +
Sbjct: 63  WDRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICS 122

Query: 123 GMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNH 178
                    ++  +  GS           L +     E++     + ++ A D  +    
Sbjct: 123 VDLIGAPTKKDSFVFCGSCDKQLCGMCETLWTPNLDPEQLFLTMSQTLTHAFDRNITCGW 182

Query: 179 NIVLETLKVG 188
              +  L   
Sbjct: 183 GATVFVLDKD 192


>gi|281182898|ref|NP_001162425.1| proteasome subunit beta type-4 [Papio anubis]
 gi|109016221|ref|XP_001108305.1| PREDICTED: proteasome subunit beta type-4-like isoform 3 [Macaca
           mulatta]
 gi|297279962|ref|XP_002801820.1| PREDICTED: proteasome subunit beta type-4-like [Macaca mulatta]
 gi|163781022|gb|ABY40798.1| proteasome subunit, beta type, 4 (predicted) [Papio anubis]
          Length = 264

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A  +  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARNLVERCMRV 220


>gi|146086144|ref|XP_001465467.1| proteasome alpha 2 subunit [Leishmania infantum JPCM5]
 gi|12054744|emb|CAC20614.1| promastigote alpha-2 subunit [Leishmania infantum]
 gi|134069565|emb|CAM67888.1| putative proteasome alpha 2 subunit [Leishmania infantum JPCM5]
 gi|322498946|emb|CBZ34019.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 231

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    VVIA   +      V  ++ +KV  L +  +   ++G   D   L++
Sbjct: 29  KGTTALGVKATDGVVIAAKKKAPS-TLVDASSIQKVFVLDEH-VGCTYSGMGPDCRVLID 86

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
              K  +QY           QL+R    L +++     +R     +L+A  D     +  
Sbjct: 87  SARKNCQQYRLMYNESIPISQLVRKISALYQEFTQSGGVRPFGCSLLVAGVDANGYHLYQ 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG+G   A +      +     E+    A+
Sbjct: 147 VDPSGTFWAWKATAIGTGSPDAKAFLEKRYTVDMELEDAVHTAL 190


>gi|82802842|gb|ABB92465.1| rcPSMB3 [Pan troglodytes]
          Length = 204

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 62/193 (32%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ ++    V IA D    +   ++  + +++  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAIMAMKGKNCVAIAADRHFRIQAQMVTTDFQEIFPMGGWLYI-GLAGLATDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSS-----VELAKDWRMDKYLRNLEAMILIADKT----ITL 119
            T+ + L+ +L  Y  +  +         +  +   +K+        +IA          
Sbjct: 61  QTVAQCLKFRLNLYELKEGQQIKPYTFTSMVANLLYEKHFGPYYTEPVIAGLDLKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
             +          +  +  GS          +L       E +     +AM  A D    
Sbjct: 121 RCSLDLIGCPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHLFETISQAMLNAMDWGAG 180

Query: 176 TNHNIVLETLKVG 188
           +   +++   +  
Sbjct: 181 SGMGVIIHITEKN 193


>gi|323448836|gb|EGB04730.1| hypothetical protein AURANDRAFT_32152 [Aureococcus anophagefferens]
          Length = 219

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 57/191 (29%), Gaps = 16/191 (8%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           K      +  ++         ++A D Q+  G T+      +   LG    + G +G  A
Sbjct: 11  KFRPYTNNGGSLAAASGHDFTLLAADSQLVHGMTIASTVFERTSALGNLAAL-GTSGCVA 69

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           D  +L   L  + E+Y      S           + +    A    A   +  +      
Sbjct: 70  DCDSLSHDLRMEAERYFWGAEMSMEASVAAQVCSQMMYARRAFPYYASLLLCGLDRFGTG 129

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARA-------LMSTQNSAEEIARKAMSIAAD 171
                       E  ++A+GS      +                + A+E+   A  +AA 
Sbjct: 130 RVCVFDSFGSITEGQMVAVGSAQGVLQAVLDRFAPRYFPRFRCIDDAKEVLLSAFKVAAR 189

Query: 172 ICVYTNHNIVL 182
             V   H + L
Sbjct: 190 RDVSVGHFVDL 200


>gi|551547|gb|AAB31085.1| prosome beta-subunit [Homo sapiens]
 gi|743649|prf||2013227A proteasome:SUBUNIT=beta
          Length = 233

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 16  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 73

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 74  FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 133

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 134 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 189


>gi|21465655|pdb|1IRU|N Chain N, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465669|pdb|1IRU|2 Chain 2, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
          Length = 219

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 2   QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 59

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 60  FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 119

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 120 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 175


>gi|330318776|gb|AEC11048.1| 20S proteasome beta subunit pbc2 [Camellia sinensis]
          Length = 187

 Score = 67.7 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 13/161 (8%)

Query: 25  GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN 84
               IA D ++ +    +  + +++ ++     I G AG + D+ T+ +RL  + + Y  
Sbjct: 1   NCFAIASDRRLGVQLQTIATDFQRIYKIHDKLSI-GLAGLATDSQTMYQRLVFRHKLYQL 59

Query: 85  QLLRSSVELAKDWRMDKYLRNLEAMILI--------ADKTITLVITGMG-DVLEPENGVM 135
           +  R          +   L                  D     + T       E     +
Sbjct: 60  REERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFICTMDSIGAKELAKDFV 119

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
             G+       A  A+      AEE+     +A+  + D  
Sbjct: 120 VAGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRD 160


>gi|260941227|ref|XP_002614780.1| hypothetical protein CLUG_05558 [Clavispora lusitaniae ATCC 42720]
 gi|238851966|gb|EEQ41430.1| hypothetical protein CLUG_05558 [Clavispora lusitaniae ATCC 42720]
          Length = 269

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 22/205 (10%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                 + +  T++L ++    +VIA D   S G  +   N  ++ R+G   ++ G +G 
Sbjct: 35  MHTQQPI-ITGTSVLGLKFKNGIVIAADHMGSYGSLLRFNNIERLIRVGSETVV-GISGD 92

Query: 65  SADAFTLLERL-----EKKLEQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA- 113
            +D   +   L     E+++       LR+             R  K      A+I+   
Sbjct: 93  ISDLQHIERLLHQLETEEEVYDNTGAKLRAPHIHEYLTRVLYNRRSKMDPLWNAVIVAGF 152

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEIARK 164
            D     +       +      +A G G   A+   R L+             A E    
Sbjct: 153 NDDRSPFIRYVDLLGVAYGASALATGFGAHLAIPLLRQLVPYDEDYVKVTEEEAREAIVN 212

Query: 165 AMSIAADICVYTNHNIVLETLKVGD 189
           +M +        +    L TL   D
Sbjct: 213 SMRVLYYRDARASDKYTLATLTFED 237


>gi|6320849|ref|NP_010928.1| Pre1p [Saccharomyces cerevisiae S288c]
 gi|730378|sp|P22141|PSB2_YEAST RecName: Full=Proteasome component C11; AltName: Full=Macropain
           subunit C11; AltName: Full=Multicatalytic endopeptidase
           complex subunit C11; AltName: Full=Proteinase YSCE
           subunit 11
 gi|3114279|pdb|1RYP|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114293|pdb|1RYP|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513422|pdb|1G65|J Chain J, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513436|pdb|1G65|X Chain X, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11514001|pdb|1G0U|J Chain J, A Gated Channel Into The Proteasome Core Particle
 gi|11514015|pdb|1G0U|X Chain X, A Gated Channel Into The Proteasome Core Particle
 gi|14488815|pdb|1FNT|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488829|pdb|1FNT|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|20150386|pdb|1JD2|J Chain J, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150393|pdb|1JD2|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|75765709|pdb|1Z7Q|K Chain K, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765723|pdb|1Z7Q|Y Chain Y, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|93279377|pdb|2F16|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279391|pdb|2F16|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279665|pdb|2FNY|J Chain J, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279679|pdb|2FNY|X Chain X, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032211|pdb|2FAK|J Chain J, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032225|pdb|2FAK|X Chain X, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490852|pdb|2GPL|J Chain J, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490866|pdb|2GPL|X Chain X, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|178847469|pdb|2ZCY|J Chain J, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847483|pdb|2ZCY|X Chain X, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847511|pdb|3BDM|J Chain J, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847525|pdb|3BDM|X Chain X, Yeast 20s Proteasome:glidobactin A-Complex
 gi|190016376|pdb|3D29|J Chain J, Proteasome Inhibition By Fellutamide B
 gi|190016390|pdb|3D29|X Chain X, Proteasome Inhibition By Fellutamide B
 gi|197725330|pdb|3E47|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725344|pdb|3E47|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939221|pdb|3DY3|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939235|pdb|3DY3|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939249|pdb|3DY4|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939263|pdb|3DY4|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828246|pdb|3GPJ|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828260|pdb|3GPJ|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588330|pdb|3GPT|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588344|pdb|3GPT|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588358|pdb|3GPW|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588372|pdb|3GPW|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588552|pdb|3HYE|J Chain J, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588566|pdb|3HYE|X Chain X, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|298508232|pdb|1VSY|K Chain K, Proteasome Activator Complex
 gi|298508246|pdb|1VSY|Y Chain Y, Proteasome Activator Complex
 gi|298508448|pdb|3L5Q|O Chain O, Proteasome Activator Complex
 gi|298508462|pdb|3L5Q|1 Chain 1, Proteasome Activator Complex
 gi|323462945|pdb|3NZJ|J Chain J, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462959|pdb|3NZJ|X Chain X, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462973|pdb|3NZW|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462987|pdb|3NZW|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323463001|pdb|3NZX|J Chain J, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463015|pdb|3NZX|X Chain X, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|330689390|pdb|3MG4|J Chain J, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689404|pdb|3MG4|X Chain X, Structure Of Yeast 20s Proteasome With Compound 1
 gi|311329|emb|CAA40149.1| proteinase yscE subunit 11 [Saccharomyces cerevisiae]
 gi|603604|gb|AAB64545.1| Pre1p: 22.6 kDa subunit of proteinase yscE [Saccharomyces
           cerevisiae]
 gi|45269505|gb|AAS56133.1| YER012W [Saccharomyces cerevisiae]
 gi|190405573|gb|EDV08840.1| 22.6 kDa proteasome subunit [Saccharomyces cerevisiae RM11-1a]
 gi|207346028|gb|EDZ72648.1| YER012Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273753|gb|EEU08678.1| Pre1p [Saccharomyces cerevisiae JAY291]
 gi|259145918|emb|CAY79178.1| Pre1p [Saccharomyces cerevisiae EC1118]
 gi|285811635|tpg|DAA07663.1| TPA: Pre1p [Saccharomyces cerevisiae S288c]
 gi|323309365|gb|EGA62582.1| Pre1p [Saccharomyces cerevisiae FostersO]
 gi|323333907|gb|EGA75296.1| Pre1p [Saccharomyces cerevisiae AWRI796]
 gi|323337919|gb|EGA79158.1| Pre1p [Saccharomyces cerevisiae Vin13]
 gi|323348955|gb|EGA83191.1| Pre1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323355420|gb|EGA87244.1| Pre1p [Saccharomyces cerevisiae VL3]
          Length = 198

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R    V++A    V+ G +V+K +  K R+L     +  FAG + D     E ++ 
Sbjct: 4   ILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHT-LMSFAGEAGDTVQFAEYIQA 62

Query: 78  KLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADK--TITLVITGMGD 126
            ++ Y  +        A               +    +  +I   DK      +      
Sbjct: 63  NIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             + E    A G  G Y  S          + EE
Sbjct: 123 GTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEE 156


>gi|322830427|gb|EFZ33453.1| proteasome alpha 2 subunit, putative [Trypanosoma cruzi]
          Length = 288

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    VVIA + + +          +KV  L    +   ++G   D   L++
Sbjct: 86  KGTTALGVKAMDGVVIAAEKKTTS-PLAASLTVQKVFVLDDH-VGCTYSGIGPDCRVLVD 143

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVIT 122
              K  ++Y           QL+R    L +++     +R     +L+  AD     +  
Sbjct: 144 AARKACQKYRLTYHEPMPVSQLVRHISSLYQEFTQSGGVRPFGCSLLVAGADSQGNHLYQ 203

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        +IG G + A +      + +   E+    A+
Sbjct: 204 VDPSGTFWAWKATSIGKGSTDAKTFLEKRYTNEMEIEDAVHTAL 247


>gi|19112100|ref|NP_595308.1| 20S proteasome component beta 7 [Schizosaccharomyces pombe 972h-]
 gi|17380267|sp|Q9USQ9|PSB4_SCHPO RecName: Full=Probable proteasome subunit beta type-4
 gi|5830510|emb|CAB54818.1| 20S proteasome component beta 7 [Schizosaccharomyces pombe]
          Length = 262

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 18/192 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLL 72
            +++L ++    V+IA D   S G      +  ++ ++G   I+   G          LL
Sbjct: 43  GSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLL 102

Query: 73  ERLEKK---------LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           E+LE K         L+        S V  A+  ++D Y   L    +  +     V   
Sbjct: 103 EKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFA 162

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ-------NSAEEIARKAMSIAADICVYT 176
                      +A G     AL   R              SA     + M +       +
Sbjct: 163 DLRGTTYSAPAIATGFAMHLALPMLRKATDDDRWKTLSKESARATIDECMRVLFYRDARS 222

Query: 177 NHNIVLETLKVG 188
            +   + T+   
Sbjct: 223 LNKFSVATITPE 234


>gi|237830643|ref|XP_002364619.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
 gi|211962283|gb|EEA97478.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
 gi|221487700|gb|EEE25932.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
 gi|221507494|gb|EEE33098.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
          Length = 205

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 56/176 (31%), Gaps = 16/176 (9%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
            + + ++ +     V IA D ++ + Q   + A+ +KV ++     + G AG + D  T+
Sbjct: 4   YNGSAVVAMAGKDCVGIASDTRLGVNQFGTVSADFQKVFKMNNHTFV-GLAGLATDVQTV 62

Query: 72  LERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIAD----KTITLVI 121
            + L  +   Y  +   +         +       +         ++A          + 
Sbjct: 63  HKELVFRSNLYQLREEVTEMPPEIMSNVVSSMLYGRRFAPYFVSPVVAGLHPETHQPFLS 122

Query: 122 TGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADIC 173
                         +  G+     +    +L     + +E+     +++  A D  
Sbjct: 123 AFDYIGAACYAKDFVCNGTSAEQLVGVCESLWKPDMNEDELMETLSQSLLAAVDRD 178


>gi|297848158|ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337802|gb|EFH68219.1| hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 246

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 11/159 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ ++    V++A D   S G T+   N  +V+ +GK +++ G +G  +D   +L  
Sbjct: 31  GTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLL-GASGEISDFQEILRY 89

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILI-------ADKTITLVITGM 124
           L E  L         S         + +  Y R  +   L             + +    
Sbjct: 90  LDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNGKSYLGMVS 149

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
              +  E+  +A G G   A    R       S E+  +
Sbjct: 150 MIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVK 188


>gi|254582206|ref|XP_002497088.1| ZYRO0D15158p [Zygosaccharomyces rouxii]
 gi|238939980|emb|CAR28155.1| ZYRO0D15158p [Zygosaccharomyces rouxii]
          Length = 195

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 50/154 (32%), Gaps = 12/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R    V++A     + G +++K    K R L   N +  F G + D+    E ++ 
Sbjct: 4   ILGIRVQDSVILASSKAATRGISILKEQDDKTRELSPHN-LMSFGGEAGDSVQFAEYIQA 62

Query: 78  KLEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGD 126
            ++ Y  +       LA                  Y  N+      + K    +      
Sbjct: 63  NIQLYAIRENIELSPLAVSSFVRQELAKSIRSRKPYQVNVLIGGYDSKKQKPELYQIDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
            ++ E    A G  G Y  S          + EE
Sbjct: 123 GIKVELPYAAHGYSGFYTFSLLDHHYRPDMTTEE 156


>gi|297843714|ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsis lyrata subsp. lyrata]
 gi|297335580|gb|EFH65997.1| 20S proteasome beta subunit PBG1 [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 11/159 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    +++A D   S G T+   N  +++ +GK +++ G +G  +D   +L  
Sbjct: 30  GTSVVAIKYKDGILMASDMGGSYGSTLRYKNIERMKAIGKHSLL-GASGEISDFQEILRY 88

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITG--MGDVLE 129
           L E  L         S         + +  Y R  +   L     +  V  G     ++ 
Sbjct: 89  LDELMLNDNMWDDGNSLGPKEVLNYLTRVVYNRRNKFNPLWNTLVVGGVKYGEKYLGMVS 148

Query: 130 P-----ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                 E+  +A G G   A    R       S EE  +
Sbjct: 149 MIGVSFEDNHVATGFGNHLARPILRDEWREDLSFEEGVK 187


>gi|114583222|ref|XP_001153178.1| PREDICTED: similar to rcPSMB3 isoform 1 [Pan troglodytes]
 gi|114583224|ref|XP_001153229.1| PREDICTED: similar to rcPSMB3 isoform 2 [Pan troglodytes]
 gi|332815413|ref|XP_003309511.1| PREDICTED: proteasome subunit beta type-3-like [Pan troglodytes]
          Length = 205

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 62/193 (32%), Gaps = 14/193 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   I+ ++    V IA D    +   ++  + +++  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAIMAMKGKNCVAIAADRHFRIQAQMVTTDFQEIFPMGGWLYI-GLAGLATDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSS-----VELAKDWRMDKYLRNLEAMILIADKT----ITL 119
            T+ + L+ +L  Y  +  +         +  +   +K+        +IA          
Sbjct: 61  QTVAQCLKFRLNLYELKEGQQIKPYTFTSMVANLLYEKHFGPYYTEPVIAGLDLKTFKPF 120

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
             +          +  +  GS          +L       E +     +AM  A D    
Sbjct: 121 RCSLDLIGCPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHLFETISQAMLNAMDWGAG 180

Query: 176 TNHNIVLETLKVG 188
           +   +++   +  
Sbjct: 181 SGMGVIIHITEKN 193


>gi|225712652|gb|ACO12172.1| Proteasome subunit beta type-3 [Lepeophtheirus salmonis]
          Length = 205

 Score = 67.3 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 63/190 (33%), Gaps = 14/190 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           ++ + +L ++ +  V IA D +  + +  +  +  K   +G G  + G AG + D  T+ 
Sbjct: 6   INGSAVLAMKGNDCVSIASDLRFGINRHTVMTDFPKTLEMGPGLFV-GLAGLATDIQTVQ 64

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG------- 125
           ++L  +++ +  +  R          +   L          +  +               
Sbjct: 65  QKLNFRMKMFELREGRKMRPNTFSTMLSHLLYERRFGPFFVNSIVAGYDYVENKPFISSM 124

Query: 126 ---DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHN 179
                +      +A G+     +    AL     + EE++    +A+  + D        
Sbjct: 125 DLIGAITIPEDFVAAGTSEDSLMGMCEALWFENMNPEELSEATSQAIMNSFDRDSLAGWG 184

Query: 180 IVLETLKVGD 189
             +  ++   
Sbjct: 185 AEVHIIEKHQ 194


>gi|255717008|ref|XP_002554785.1| KLTH0F13750p [Lachancea thermotolerans]
 gi|238936168|emb|CAR24348.1| KLTH0F13750p [Lachancea thermotolerans]
          Length = 195

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 54/154 (35%), Gaps = 12/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R    V++A    V+ G +V+KA+  K R+L +  ++  ++G + DA    E ++ 
Sbjct: 4   ILGIRVQNTVILATSKAVTRGISVLKADDDKTRQLSEH-VLMAYSGEAGDAVQFSEYIQA 62

Query: 78  KLEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGD 126
            ++ Y  +        A                  Y  N+      A +    +      
Sbjct: 63  NIQLYSIRENYELSPKAVSSFVRQELAKSIRSRRPYQVNVLIGGYDAHQKKPELYQIDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             + E    A G  G Y  S          + EE
Sbjct: 123 GTKVELPYAAHGYSGFYTFSLLDHHYRPDMTVEE 156


>gi|159113236|ref|XP_001706845.1| Proteasome subunit beta type 4 precursor [Giardia lamblia ATCC
           50803]
 gi|157434945|gb|EDO79171.1| Proteasome subunit beta type 4 precursor [Giardia lamblia ATCC
           50803]
          Length = 217

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 56/189 (29%), Gaps = 14/189 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +   T++ V     V++A D  ++ G T    N  ++  +G    + GF G  AD    L
Sbjct: 5   LTGGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHT-LIGFTGDEADFKDSL 63

Query: 73  ERLEKKLEQ--YPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVIT 122
             L+    +         S+ E+        Y   LE   +                +  
Sbjct: 64  YTLKSMHREARCHGTPPPSTREIHGFLATRNYSSRLEMDPIYNGYIIGGCEPGESPYIGV 123

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVYTNHN 179
                 +      A G G  YAL   R       S +E      +++   A        +
Sbjct: 124 VDLRGTQFTASFFATGMGRHYALPVLREGWKPGISKDEAVALLLESLKTLAFNDAAAGSS 183

Query: 180 IVLETLKVG 188
            ++      
Sbjct: 184 FIICEATSD 192


>gi|256070137|ref|XP_002571402.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
 gi|238652629|emb|CAZ39087.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
          Length = 194

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 54/177 (30%), Gaps = 14/177 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + + ++ +       IA D +  +    +  +  KV  LG    + GF G + D  T+ +
Sbjct: 7   NGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYV-GFPGLATDNQTVFQ 65

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMI-------LIADKTITLVITGM 124
           RL+ +   Y  +  ++         +    Y R             +        V    
Sbjct: 66  RLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPYVACMD 125

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
               +   N  +  G+           L     +++E+     + +  A +    + 
Sbjct: 126 LIGCVCEANDFVVSGTCTEQMYGMCETLWEENMNSKELFECISQCILNALNRDAVSG 182


>gi|297619735|ref|YP_003707840.1| proteasome endopeptidase complex subunit alpha [Methanococcus
           voltae A3]
 gi|297378712|gb|ADI36867.1| proteasome endopeptidase complex, alpha subunit [Methanococcus
           voltae A3]
          Length = 254

 Score = 67.3 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 55/169 (32%), Gaps = 15/169 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+A D ++S  + V  ++  K+ ++    + A     +     +  
Sbjct: 35  RGTTAVGIKCKDGVVLAVDRRISN-KLVEVSSIEKIFQVDDHIVAATSGLVADARVLIDR 93

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R E ++ +       +   L+K     K                +I   DK    +   
Sbjct: 94  ARTEAQINRITYGEKITVEALSKKICDIKQAYTQHGGARPFGLALLITGIDKHSARLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                  E    AIGSG   A+           +     ++ M +A  I
Sbjct: 154 DPSGALIEYKASAIGSGRHVAMELLEEKYDENIT----VKEGMDLAIYI 198


>gi|302414586|ref|XP_003005125.1| proteasome component PRE4 [Verticillium albo-atrum VaMs.102]
 gi|261356194|gb|EEY18622.1| proteasome component PRE4 [Verticillium albo-atrum VaMs.102]
          Length = 276

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 67/221 (30%), Gaps = 46/221 (20%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VVIA D   S G      N +++R   +  +I GF G  +D   L   
Sbjct: 40  GTSVIAIKYSEGVVIAADNLASYGSLARFTNVKRLRTFAESTVI-GFGGDVSDMQYLDRH 98

Query: 75  LEKK-LEQYPNQLLRSSV--------ELAKDWRMDKYLRNLEAMILIA------------ 113
           L    + +       ++         + A+       L    A +  A            
Sbjct: 99  LTSLAINESYGSPAITASADTLDGDADKARPRLNAANLHKYLAKLFYARRTKFDPLWNHV 158

Query: 114 ------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AE 159
                 D     +              +A G G   A    R     + S        AE
Sbjct: 159 LVAGVDDDDKPFLAAADLLGTTFSAPSLATGFGSMLAQPIMRRSAPDEESAAKLTRQQAE 218

Query: 160 EIARKAMSI-----AADICVY-----TNHNIVLETLKVGDE 190
           ++ ++ M +     A  +  Y     T   + L+  +  ++
Sbjct: 219 DVIKECMKVLYYRDARSLDSYSIAVVTKDGVELKEDEKLEK 259


>gi|71027645|ref|XP_763466.1| 20S proteasome subunit beta 7 [Theileria parva strain Muguga]
 gi|68350419|gb|EAN31183.1| 20S proteasome beta 7 subunit, putative [Theileria parva]
          Length = 229

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 18/171 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +I+ ++ +  V++  D + SLG+     N  ++  +    + A  +G +AD   L   
Sbjct: 7   GASIIAMKYNEGVLMMTDTKWSLGRMARYMNVLRLESVSSNTLFAT-SGDAADHQYLTRV 65

Query: 75  LEK-----KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------DKTITLV 120
           L+       LE   +                + L +    +                  +
Sbjct: 66  LKHAVHTDLLEHNNDASKALLNPEMLLNYTSRLLYHRRTKLDPVLVSAVVGGLSNGKPFL 125

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
                   +  +  +  G G  +A+   R       S   A+E+A K M +
Sbjct: 126 GYTDYYGTKYTDNFVVTGLGKYFAIGPLREEHRNDMSLSEAKELALKCMRV 176


>gi|308159163|gb|EFO61707.1| Proteasome subunit beta type 4 precursor [Giardia lamblia P15]
          Length = 217

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 61/198 (30%), Gaps = 24/198 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T++ V     V++A D  ++ G T    +  +V  +G    + GF G  AD    +  
Sbjct: 7   GGTVVAVTHKDGVLMAADTVLNYGSTRRTDSYERVIPIGTHT-LIGFTGDEADFKDSVYT 65

Query: 75  LEKKLEQ--YPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGM 124
           L+    +         S+ E+        Y   LE   +                +    
Sbjct: 66  LKSMHREARCHGVPPPSTKEIHGFLATRNYSSRLEMDPIYNGYIVGGCEPGESPYIGVVD 125

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMS------IAAD---- 171
               +      A G G  YAL   R       S +E      +++        AA     
Sbjct: 126 MRGTQFTASFFATGMGRHYALPVLREGWKPGISKDEAVALLLESLKTLAFNDAAAGSSFI 185

Query: 172 ICVYTNHNIVLETLKVGD 189
           IC  TN    +  ++  D
Sbjct: 186 ICEATNDGTHIGPIQTLD 203


>gi|198431191|ref|XP_002124862.1| PREDICTED: similar to proteasome beta 4 subunit [Ciona
           intestinalis]
          Length = 258

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 64/204 (31%), Gaps = 25/204 (12%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           ++     +  T++L ++  G V+IA D   S G      N  +V ++    I++     +
Sbjct: 37  NRTSQPTVTGTSVLGLKFTGGVIIAADTLGSYGSMARFRNVSRVMKVNDSTILSAAGDYA 96

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKT 116
              F   E  +  +++            A    M + L +  +                 
Sbjct: 97  DFQFIKAEIEQMVIDEEVLNDGFFMSPGAVHSWMTRMLYHRRSKFDPLWNSVTVAGFYNG 156

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS------AEEIARKAMSI-- 168
            + + +     +  ++  +A G G   A    R  +           A  +  + + +  
Sbjct: 157 ESFLGSVDKIGIAFKSASVASGFGAYLAQPLMRKAIEDNGDNLSYEKARHVIEECLKVLY 216

Query: 169 ---AA-----DICVYTNHNIVLET 184
              A      +I V T   + +E 
Sbjct: 217 YRDARSYNRYEIAVVTKDGVKIEK 240


>gi|261331946|emb|CBH14939.1| proteasome alpha 2 subunit, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 265

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    VVIA + + +           KV  L    +   ++G   D   L++
Sbjct: 63  KGTTALGVKATDGVVIAAEKKTTS-PLADSLTLHKVFALDDH-VGCTYSGIGPDCRVLVD 120

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVIT 122
              +  ++Y           QL+R    L +++     +R     +L+  AD     +  
Sbjct: 121 AARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQ 180

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        +IG G   A +      + +   E+    A+
Sbjct: 181 LDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTAL 224


>gi|328785112|ref|XP_394993.2| PREDICTED: proteasome subunit beta type-4-like [Apis mellifera]
          Length = 267

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 49/168 (29%), Gaps = 12/168 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
               +    T+++ ++    ++IA D   S G      N  +V ++    I+      + 
Sbjct: 53  SQAPM-TTGTSVVGIQFKNGILIATDILGSYGSLARYRNLERVMKVNDNIILGAGGDYAD 111

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------KTI 117
                     K LE+       S    A    + +  Y R  +      +          
Sbjct: 112 YQCLKSHIERKILEEECLDDGLSLKPKALHCWLTRVLYNRRSQFDPFWNNFIIGGLEGDK 171

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIAR 163
             + T         + V+A G G   A    R     + + S E+   
Sbjct: 172 LFLGTVDKLGTAYSDPVIATGYGAYMATPILRKAYEENKEMSKEQAIE 219


>gi|321473527|gb|EFX84494.1| hypothetical protein DAPPUDRAFT_99667 [Daphnia pulex]
          Length = 262

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 15/166 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+IL +  DG V++AGD   S G      +  ++ ++    ++ G  G  AD   L   
Sbjct: 51  GTSILGLIFDGGVMLAGDMLGSYGSMAKFRSIERIIKVNNSTVL-GATGDIADFQHLQSI 109

Query: 75  LEKK-LEQYPNQLLRSSVELAKD--------WRMDKYLRNLEAMILIADKT-ITLVITGM 124
           +E+K +++       +    A           R  K+       ++   +     +    
Sbjct: 110 IEQKVIDEDCADDGFTLKPKALHTWLTRVLYNRRSKFDPLWNTFLVAGIEDGEPYLGCVD 169

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSI 168
                  +  +A G G   AL   R  +    Q + EE   +A+ I
Sbjct: 170 KIGTAFSDSKIATGYGAHIALPLMREGLEKKPQMTQEEA--RALLI 213


>gi|55824566|gb|AAV66403.1| proteasome subunit beta-type 4 [Macaca fascicularis]
          Length = 223

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 16  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 73

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 74  FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 133

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A  +  + M +
Sbjct: 134 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARNLVERCMRV 189


>gi|195389042|ref|XP_002053187.1| GJ23747 [Drosophila virilis]
 gi|194151273|gb|EDW66707.1| GJ23747 [Drosophila virilis]
          Length = 208

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 59/196 (30%), Gaps = 20/196 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    + IA D +  L       + +KV  L     + G  G   D 
Sbjct: 5   NKITYNGGCVIAMQGKDCIGIATDRRFGLQSHTAGEDCQKVFHLSPRLYL-GLTGLQTDI 63

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+  RL  +   Y     R          +   L               ++     + L
Sbjct: 64  MTVYNRLLYRKNVYEINEGREVSPKVLTELLSHLLYEHRFGPFFV---EPVIAGLDPETL 120

Query: 129 EPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADI 172
           EP              N  +A G+     +    ++ S   +A E+ +   +AM  + + 
Sbjct: 121 EPYICCMDLIGCANVTNDFVATGTCSDQLVGMCESVWSPNLNATELFKTIAQAMLGSFNR 180

Query: 173 CVYTNHNIVLETLKVG 188
              +     +  L+  
Sbjct: 181 DAVSGWGSSIFILEKD 196


>gi|224089062|ref|XP_002308619.1| predicted protein [Populus trichocarpa]
 gi|222854595|gb|EEE92142.1| predicted protein [Populus trichocarpa]
          Length = 244

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    +++A D   S G T+   +  +++ +GK +II G +G  +D   ++  
Sbjct: 29  GTSVVALKYKDGILMAADMGGSYGSTLRYKSVERIKPVGKHSII-GASGEISDFQEIMRY 87

Query: 75  LEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGM 124
           L++++     + ++      E+        Y R  +   L          K    +    
Sbjct: 88  LDEQVLNDNMWDDRNSLGPKEIHSYLTRVMYNRRNKFDPLWNTLILGGVKKGQKFLGMVT 147

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +  E   +A G G   A    RA      + EE   +  K M +     
Sbjct: 148 MIGVNFEENHIATGFGNHMAQPLLRAEWHENLTFEEGVTLLEKCMRVLLYRD 199


>gi|15223537|ref|NP_176040.1| PBG1; peptidase/ threonine-type endopeptidase [Arabidopsis
           thaliana]
 gi|82581521|sp|Q7DLR9|PSB4_ARATH RecName: Full=Proteasome subunit beta type-4; AltName: Full=20S
           proteasome beta subunit G-1; AltName: Full=Proteasome
           component H; AltName: Full=Proteasome subunit beta
           type-7; Flags: Precursor
 gi|12323023|gb|AAG51500.1|AC058785_3 20S proteasome beta subunit (PBG1) [Arabidopsis thaliana]
 gi|14190405|gb|AAK55683.1|AF378880_1 At1g56450/F13N6_3 [Arabidopsis thaliana]
 gi|15010590|gb|AAK73954.1| At1g56450/F13N6_3 [Arabidopsis thaliana]
 gi|15450551|gb|AAK96453.1| At1g56450/F13N6_3 [Arabidopsis thaliana]
 gi|62320870|dbj|BAD93840.1| putative protein [Arabidopsis thaliana]
 gi|332195276|gb|AEE33397.1| proteasome subunit beta type-4 [Arabidopsis thaliana]
          Length = 246

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 11/159 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ ++    V++A D   S G T+   N  +V+ +GK +++ G +G  +D   +L  
Sbjct: 31  GTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLL-GASGEISDFQEILRY 89

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILI-------ADKTITLVITGM 124
           L E  L         S         + +  Y R  +   L             + +    
Sbjct: 90  LDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNGKSYLGMVS 149

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
              +  E+  +A G G   A    R       S E+  +
Sbjct: 150 MIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVK 188


>gi|322495245|emb|CBZ30549.1| 20s proteasome beta 7 subunit, (putative) [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 220

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 17/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++ +G V++A D  +S G      N  +++ LG  + +    GS AD   + ++
Sbjct: 4   GGSVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSYSAVCA-TGSYADFQMMAKQ 62

Query: 75  LEKKLE---QYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVITGM 124
           +E  +E    Y N       E+        Y +         + + + A  + T +    
Sbjct: 63  VEDNIERQKMYHNVDELKPSEVFSYLHRSIYQKRCDFEPCLCQMVFIGARDSETFLAAVD 122

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ------NSAEEIARKAMSI 168
                 E+  +A G G   AL   R  +           AE+I    + +
Sbjct: 123 DVGTRWEDDCVATGYGAFIALPLLRQALEKNPGGLSRVQAEQILTDCLRV 172


>gi|320582525|gb|EFW96742.1| Beta 6 subunit of the 20S proteasome [Pichia angusta DL-1]
          Length = 226

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 50/186 (26%), Gaps = 29/186 (15%)

Query: 31  GDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSS 90
           GD + + G ++      KV  +G   ++    G +AD+  L++  + +LE Y     +  
Sbjct: 30  GDTRSTSGYSINTRYEPKVFDVGNN-LLLTANGFAADSAQLIKVFKNQLEWYHFDHNKPM 88

Query: 91  VELAKDW-----RMDKYLRNLEAMILIADKTITL---VITGMGDVLEPENGVMAIGSGGS 142
              +           K         ++          + +             A G+  S
Sbjct: 89  STQSAARFIQHLLYGKRFFPYYVHTILGGLDEEGKGAIYSFDPVGSYEREQCRAGGAAAS 148

Query: 143 YALSAAR--ALMSTQNSAE------------------EIARKAMSIAADICVYTNHNIVL 182
             +           Q                      ++ R A S A +  +     + +
Sbjct: 149 LIMPFLDNQVNFKNQMDPASDGKKRKPIRFLSLEEVIQLVRDAFSSATERHIQVGDGLEI 208

Query: 183 ETLKVG 188
             +   
Sbjct: 209 LIVTKD 214


>gi|226478644|emb|CAX72817.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
           japonicum]
          Length = 205

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 56/188 (29%), Gaps = 14/188 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + + ++ +       IA D +  +    +  +  KV  LG    + GF G + D   + +
Sbjct: 7   NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYV-GFPGLATDNQIVFQ 65

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMI-------LIADKTITLVITGM 124
           RL+ +   Y  +  R+         +    Y R             +    +   V    
Sbjct: 66  RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNI 180
               +   N  +  G+           L      ++E+     + +  A +    +    
Sbjct: 126 LIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAISGWGA 185

Query: 181 VLETLKVG 188
            +  ++  
Sbjct: 186 RVYLIEKD 193


>gi|149030731|gb|EDL85768.1| proteasome (prosome, macropain) subunit, beta type 4 [Rattus
           norvegicus]
          Length = 264

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 63/176 (35%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ D  VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIAD-KTI 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYAGGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
           + +       +  E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220


>gi|126697448|gb|ABO26681.1| proteasome subunit N3 [Haliotis discus discus]
          Length = 253

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 16/170 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L ++ +G + IA D   S G      +  +V ++ +  ++ G    +   F     
Sbjct: 46  GTSVLGIKFNGGIAIAADMLGSYGSMARFRDISRVLKVNETTVLGGGGDYADFQFIRSII 105

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTITLVITGMG 125
            ++ +++       S    +    + + L N  +              DK    +     
Sbjct: 106 NQRVIDEECLNDGFSYTPRSLFSWLTRVLYNRRSNFNPLWNVFVVGGMDKDEPFLGYVDK 165

Query: 126 DVLEPENGVMAIGSGGSYALSAAR--ALMSTQNSAEEIARKAMSIAADIC 173
             +  E+  +A G G   A    R         S EE A + +    D C
Sbjct: 166 IGVAYESTTIATGYGAYIAQPIMREALEKKPDISQEE-AEQLL----DRC 210


>gi|157886055|emb|CAP09537.1| novel protein similar to vertebrate proteasome (prosome, macropain)
           subunit, beta type, 4 (PSMB4) [Danio rerio]
          Length = 256

 Score = 66.9 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 25/198 (12%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++    I+      +   
Sbjct: 40  NPM-VTGTSVLGVKFKGGVIIAADMLGSYGSLARFRNISRLMKVNNSTILGASGDYADYQ 98

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGD 126
           +      +  +++       S    A    + +  Y R  +   L     I     G   
Sbjct: 99  YLKQIIEQMVIDEELLGDGHSYTPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESF 158

Query: 127 VLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI-----A 169
           +          E   +A G G   A    R ++      T+  A E+  + + +     A
Sbjct: 159 LGYVDKLGVAYEAPTVATGFGAYLAQPLMREVIENKEEITKEEARELIERCLKVLYYRDA 218

Query: 170 A-----DICVYTNHNIVL 182
                 +I + T   + +
Sbjct: 219 RSYNRHEIAIVTADGVEI 236


>gi|224013762|ref|XP_002296545.1| probable 20S proteasome beta type subunit [Thalassiosira pseudonana
           CCMP1335]
 gi|220968897|gb|EED87241.1| probable 20S proteasome beta type subunit [Thalassiosira pseudonana
           CCMP1335]
          Length = 266

 Score = 66.5 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 27/183 (14%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           ++L V+    V++A D   S G      NA+++  +     + G +G  +D   + + L 
Sbjct: 37  SVLGVKYRNGVMLAADTLCSYGSLAKYKNAKRLLPV-NSRTLIGGSGEYSDLQAINDLLR 95

Query: 77  KK-LEQYP--------NQLLRSSVELAKDWRMDKYLRNLEAMILIAD------------- 114
           +  LE                 + E+    R   Y R  +   L  D             
Sbjct: 96  RNALEDRCTADSLYEEENNEECAKEVWSYLRAVMYNRRNKMNPLWNDIVVAGFKQNEDGS 155

Query: 115 -KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAA 170
                 +          E+ ++A G GG  AL   R           A  +    + I  
Sbjct: 156 TSDEPFLGIVDKIGTAYEDDILATGFGGYIALPLMREKYHPDMEEGEARALLEDCLRILF 215

Query: 171 DIC 173
              
Sbjct: 216 YRD 218


>gi|84994864|ref|XP_952154.1| proteasome subunit y [Theileria annulata strain Ankara]
 gi|65302315|emb|CAI74422.1| proteasome subunit y, putative [Theileria annulata]
          Length = 294

 Score = 66.5 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 46/211 (21%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA 62
           ++  K+  ++M  TTI+ ++    V++  DG+ S GQ V    ARK+ R+     +   +
Sbjct: 57  MLEKKYEDIQM-GTTIIGMKFMDGVILVADGRTSSGQIVANRVARKITRILPNIFML-RS 114

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRS--------------------------------- 89
           GS+AD+ TL   +    +    QL  S                                 
Sbjct: 115 GSAADSQTLSTIIRYHAQSLKQQLKPSGRYTTHIRDEMDIDEMNEFDEYKTNEYSIELMN 174

Query: 90  ---SVELAKDWRM----DKYLRNLEAMILIADKTITLVITGM-GDVLEPENGVMAIGSGG 141
                 LAK         + +     ++   D+  + +     G  L   +  +A GSG 
Sbjct: 175 GPLVKSLAKATHNLVHEYRNMLYCGVILAGVDELGSQIYNITLGGTLIEIDDFLATGSGS 234

Query: 142 SYALSAARALMS---TQNSAEEIARKAMSIA 169
           S+  +  +       TQ    ++ +K++  A
Sbjct: 235 SFITAFLQDNYKKNSTQEDCLKLLKKSIEYA 265


>gi|289613932|emb|CBI59240.1| unnamed protein product [Sordaria macrospora]
          Length = 197

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 11/169 (6%)

Query: 30  AGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRS 89
             D + + G  +      K+ ++ +       +GS+AD   + + ++ +L  Y     R 
Sbjct: 12  GADSRTTTGAYIANRVTDKLTKVSETIWCC-RSGSAADTQAVADIVQYQLGLYEMVNARP 70

Query: 90  SVELAKDWRM----DKYLRNLEAMILIADKTITL---VITGMGDVLEPENGVMAIGSGGS 142
                               L A ++IA         V          +      GSG +
Sbjct: 71  PTTQTAAAIFQEIAYSNKDRLTAGLIIAGWDARHGGQVYNIPLGGSLHKQSYAIGGSGST 130

Query: 143 YALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           Y      A          A    ++A+  A      +   I +  L   
Sbjct: 131 YIYGFCDANWKEGMEEAEAVAFVKEALKEAIKWDGSSGGVIRMVVLTEK 179


>gi|254566233|ref|XP_002490227.1| Beta 4 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|238030023|emb|CAY67946.1| Beta 4 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|328350622|emb|CCA37022.1| 20S proteasome subunit beta 4 [Pichia pastoris CBS 7435]
          Length = 196

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L ++    VVIA     + G +++K    K R L   N +  F G S D     E ++ 
Sbjct: 4   VLGIKVSDGVVIATSKAATRGISILKDTDDKTRDLSDHN-LMAFTGESGDTVQFAEYIQA 62

Query: 78  KLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA-------DKTITLVITGMGD 126
            ++ Y  +        A        + K LR+ +   + A       DK    +      
Sbjct: 63  NIQLYNMREGHELSPYAVSHFVRNTLAKSLRSRKPYQVNALLAGYDTDKKTPSLSWIDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             + +    A G    Y LS          + E+
Sbjct: 123 GTKADLPYAAHGYAAFYTLSLLDHHYRKDMTVED 156


>gi|221131621|ref|XP_002153989.1| PREDICTED: similar to Proteasome subunit beta type-7, partial
           [Hydra magnipapillata]
          Length = 192

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 13/141 (9%)

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILI 112
              AG++AD     + +   +E +  +  +          + +YL   +        +  
Sbjct: 1   CCGAGTAADTEYTTQIISANIELHRLETQKKPRVATACRMLKQYLHRYQGHVSAALVLGG 60

Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
            D T   + T        +   + +GSG   A++   A          A+E+ R+A+   
Sbjct: 61  VDVTGPCLYTIAPHGSTDKLPYVTMGSGSLAAMAVFEAGFKPYMELDDAKELVRQAIL-- 118

Query: 170 ADI--CVYTNHNIVLETLKVG 188
             I   + +  N+ L  +   
Sbjct: 119 GGIFNDLGSGSNVDLCVITKD 139


>gi|225719470|gb|ACO15581.1| Proteasome subunit beta type-3 [Caligus clemensi]
          Length = 205

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 63/192 (32%), Gaps = 14/192 (7%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             ++ + ++ ++    V IA D +    +  +  +  K   +G G  + G AG + D  T
Sbjct: 4   FSINGSAVVAMKGKDCVGIASDLRFGSDRHTIMTDFPKTFEMGAGLYV-GLAGLATDIQT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIADKTITLVITGMGDVL 128
           + ++L  + + +  +  R          +    Y R      +         +     + 
Sbjct: 63  VHQKLNFRKKMFELREGRQMRPKTFSEMLSSLLYERRFGPFFVNPVVAGWDFVENKPFIS 122

Query: 129 EPE--------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
             +           +A+G+  +  +    AL     + +E+     +A+  + D      
Sbjct: 123 SMDLIGAMTVPKDFVAVGTSENSLMGMCEALWFEDMNKDELFEAISQALMNSFDRDSLAG 182

Query: 178 HNIVLETLKVGD 189
               +  ++   
Sbjct: 183 WGAEVHIIEKNQ 194


>gi|156085266|ref|XP_001610115.1| proteosome A [Babesia bovis T2Bo]
 gi|154797367|gb|EDO06547.1| proteosome A, putative [Babesia bovis]
          Length = 266

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 62/207 (29%), Gaps = 49/207 (23%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +     +++A D + S G  V+   ARK+ R+    +    +GS+AD+  L   
Sbjct: 37  GTTIIAMIYRDGILLAADSRTSSGPIVVNRVARKITRILPN-VFMLRSGSAADSQMLSVI 95

Query: 75  LEKKLEQYPNQLLRS-------------------------------------------SV 91
           +    +    QL +S                                           + 
Sbjct: 96  VRYHAQALCLQLRKSGRASGDDAIGSDDAMQIDSEMPTESEYSYRFDESMVYPPLKALAT 155

Query: 92  ELAKDWRMDKYLRNLEAMILIADKTI-TLVITGMGDVLEPE-NGVMAIGSGGSYALSAAR 149
              K     +       ++   D      +          +    +A GSG  Y  +   
Sbjct: 156 ATHKIVHEYREQLYCGIILGGYDMQHGPEIYNVTLGGTLLKVPHFVASGSGSGYITAFLH 215

Query: 150 ALMSTQNSAEE---IARKAMSIAADIC 173
                  S ++   + ++A+  A DI 
Sbjct: 216 DNYEPDMSRDQCLSLLKRAIKYAIDID 242


>gi|294889351|ref|XP_002772769.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
 gi|239877319|gb|EER04585.1| proteasome subunit beta type 3, putative [Perkinsus marinus ATCC
           50983]
          Length = 129

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 3/131 (2%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAF 69
           ++ +  +++ ++ +G V IA D +  + Q   + AN +KV  +     + GF G + D+ 
Sbjct: 1   MEYNGGSVIAMKGEGCVGIACDRRYGVNQLQTVSANMQKVYPMTS-RCLVGFQGLATDSQ 59

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           TL + L+ +L+ Y  +  R          M   L          +  I  +    G+   
Sbjct: 60  TLSQLLKFRLKLYKLKEDREMPCDVVSHLMATMLYEKRFGPYFCEPVIAGL-KNDGEPFI 118

Query: 130 PENGVMAIGSG 140
                + +G G
Sbjct: 119 SXXHCLQVGFG 129


>gi|213409730|ref|XP_002175635.1| 20S proteasome component beta 7 [Schizosaccharomyces japonicus
           yFS275]
 gi|212003682|gb|EEB09342.1| 20S proteasome component beta 7 [Schizosaccharomyces japonicus
           yFS275]
          Length = 264

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 60/204 (29%), Gaps = 19/204 (9%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAG 60
            +      + +  +++L ++ +G V+IA D   S G  +   +  ++ ++G   +  + G
Sbjct: 34  AVSHTQSPI-VTGSSVLALKFNGGVMIAADNLASYGSLMRFYDEERLTKVGNNTVVGVGG 92

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------- 112
                     +L++LE K +   +        + +      Y R  +   L         
Sbjct: 93  DISDYQHIQHILDKLEIKEQYNNDGHALEPSHVHEYLARLFYYRRSKMDPLWNQAIVAGV 152

Query: 113 -ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------SAEEIARK 164
                   +           +  +A G      +   R +             A  +   
Sbjct: 153 DGPNKEPYIAFADLRGTTYTSEAIATGFAAHLGMPLLRKVTEDDKWKSLTKEQARAVIDD 212

Query: 165 AMSIAADICVYTNHNIVLETLKVG 188
            M +       + +   + T+   
Sbjct: 213 CMRVLFYRDAGSLNKFSVATITAE 236


>gi|147225181|emb|CAN13313.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional protease 2) [Sus scrofa]
          Length = 175

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 52/176 (29%), Gaps = 42/176 (23%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G          +       ++A        ++   E 
Sbjct: 20  GTTIMAVEFDGGVVVGSDSRVSAG----------MELEEPPLVLAAANVVRNISYKYRED 69

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           L   L                             M+   D+     + G    +      
Sbjct: 70  LSAHL-----------------------------MVAGWDQREGGQVYGTMGGMLIRQPF 100

Query: 135 MAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
              GSG +Y      A      S EE  R    A+++A +    +   I L T+  
Sbjct: 101 AIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMNRDGSSGGVIYLVTITA 156


>gi|55162807|emb|CAH63455.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional protease 2) [Canis lupus familiaris]
          Length = 165

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G          +       ++A        ++   E 
Sbjct: 10  GTTIMAVEFDGGVVVGSDSRVSAG----------LELEEPPLVLAAANVVRNISYKYRED 59

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           L   L                             MI   D+     + G    +      
Sbjct: 60  LSAHL-----------------------------MIAGWDRRDGGQVYGTMGGMLTRQPF 90

Query: 135 MAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKV 187
              GSG +Y      A      S EE       A+++A +    +   I L T+  
Sbjct: 91  AIGGSGSTYIYGYVDAAYKPGMSPEECRSFTTNAIALAMNRDGSSGGVIHLVTITA 146


>gi|195054248|ref|XP_001994038.1| GH22652 [Drosophila grimshawi]
 gi|193895908|gb|EDV94774.1| GH22652 [Drosophila grimshawi]
          Length = 265

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 15/169 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ +R  G V++A D  VS G      N  +V ++    ++ G    +         
Sbjct: 54  GSSVVGIRYAGGVLVAADTLVSYGSLARYQNIDRVFKINDKILLGGSGDFADIQSIKRSI 113

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD--------KTITLVITGM 124
            +K +E             +    + +  Y R      L  D          +  +    
Sbjct: 114 DQKMIEDQCCNDGVVMKPKSLASWLTRVLYNRRSRMNPLYIDVVVAGVDEAGVPFLGNVD 173

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
                 ++ V+A G G   AL   R             A  + R+ M +
Sbjct: 174 LRGRAYDDYVVATGFGRHLALPLVRERKPKDRDFTFEEASNLIRECMKV 222


>gi|242005373|ref|XP_002423543.1| proteasome subunit beta type 4 precursor, putative [Pediculus
           humanus corporis]
 gi|212506672|gb|EEB10805.1| proteasome subunit beta type 4 precursor, putative [Pediculus
           humanus corporis]
          Length = 265

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 29/197 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++L ++ +  VVIA D   S G      +  +V ++ K  II G  G  AD   L E 
Sbjct: 53  GSSVLGIKFNNGVVIAADTLGSYGTLARFRDCSRVYKVNKNIII-GAGGDYADFQYLKEV 111

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGDVLEPE 131
           + +K +++            A    + +  Y R  +   L ++  I  +  G   +   +
Sbjct: 112 INQKIIDEECVDDGFYMKPKALYHWLTRVLYTRRTQLDPLWSNYVIGGIQDGEPFLGTVD 171

Query: 132 -------NGVMAIGSGGSYALSAARALMS--------TQNSAEEIARKAMSIAADIC--- 173
                  +  +A G G   A+   R  +         T+  A  +  K + +        
Sbjct: 172 KLGTAFLDDHVATGFGSYLAIPIMRDELEKRKQDGGLTEEEAVNLIYKCVEVLYYRDAKS 231

Query: 174 -------VYTNHNIVLE 183
                  + T +N+ +E
Sbjct: 232 WPKFQIGIITPNNVSVE 248


>gi|6093782|sp|Q59565|PSA_METTE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|1002689|gb|AAA93166.1| PsmA [Methanosarcina thermophila TM-1]
          Length = 247

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 61/172 (35%), Gaps = 16/172 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+  D +++  + V   +  K+ ++      A  +G  ADA  L++
Sbjct: 32  RGTTAVGIKAADGVVLLVDKRITS-RLVEAESIEKIFQIDDHIGAAT-SGLVADARALVD 89

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
           R   + +              + +   +  + +     +R     +LIA  D     +  
Sbjct: 90  RARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDKRPRLFE 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
                   E    AIG+G +  +    A      + E    +   A+  AA+
Sbjct: 150 TDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMNIEAAILLGMDALYKAAE 201


>gi|162458463|ref|NP_001105922.1| putative beta 4 proteasome subunit [Zea mays]
 gi|53771821|gb|AAU93515.1| putative beta 4 proteasome subunit [Zea mays]
          Length = 210

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L V      ++A D        V K +  KV  L     + G +G   D     E ++K
Sbjct: 4   VLGVVGRDFALVAADTSAVQSILVHKTDEDKVMVLDSQK-LMGASGEPGDRVQFTEFIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            L  Y  +        A            + K    +  ++   DK +   +        
Sbjct: 63  NLHLYQFRNTIPLSTAAAANFTRGELATALRKNPYMVNIILGGYDKDVGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  + LS    L     + EE  
Sbjct: 123 LHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAV 156


>gi|300120523|emb|CBK20077.2| unnamed protein product [Blastocystis hominis]
          Length = 602

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 64/194 (32%), Gaps = 29/194 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     +V+A + +++    V  +  + +      +I A  +G  AD  TL++ 
Sbjct: 229 GSTAIGINTKEGIVLAVEKRLTSKLIVPSSVIKIMEI--DHHIGAAMSGLVADGITLIDN 286

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIADKTITL--- 119
                  +           +    +             K  R     +LI   T      
Sbjct: 287 ARVNAANHYFNYGEPISTESIAQSLSEIMLSFGEDDNTKMSRPFGVALLIGGYTKKYGFQ 346

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IA----RKAMSIAADI 172
           +          E   ++IG+G   A    + L     S +E   IA    ++ M  A   
Sbjct: 347 LFLTDLSGTYTEYKAVSIGAGCEGATDMLKDLYKPNLSLQEGIKIALSTLKQVMKDAI-- 404

Query: 173 CVYTNHNIVLETLK 186
              T++NI + T+ 
Sbjct: 405 ---TSNNIDVATIT 415


>gi|224029691|gb|ACN33921.1| unknown [Zea mays]
          Length = 211

 Score = 66.5 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L V      ++A D        V K +  KV  L     + G +G   D     E ++K
Sbjct: 4   VLGVVGRDFALVAADTSAVQSILVHKTDEDKVMVLDSQK-LMGASGEPGDRVQFTEFIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            L  Y  +        A            + K    +  ++   DK +   +        
Sbjct: 63  NLHLYQFRNTIPLSTAAAANFTRGELATALRKNPYMVNIILGGYDKDVGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  + LS    L     + EE  
Sbjct: 123 LHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAV 156


>gi|68470326|ref|XP_720667.1| hypothetical protein CaO19.11705 [Candida albicans SC5314]
 gi|46442547|gb|EAL01835.1| hypothetical protein CaO19.11705 [Candida albicans SC5314]
 gi|238882622|gb|EEQ46260.1| proteasome component PRE4 [Candida albicans WO-1]
          Length = 278

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 23/206 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T+++  +    V++A D   S G  +   N  ++ ++GK  ++ G +G 
Sbjct: 41  MNTQQPI-ITGTSVIASKFKNGVIMAADHVGSYGSLLRFNNIERLIKVGKETVV-GISGD 98

Query: 65  SADAFTLLERL------EKKLEQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA 113
            +D   ++  L      E+  +    + LR+             R  K      A+I+  
Sbjct: 99  ISDLQYIVRLLDELEIDEEVYDNDGGEYLRAPNVHEYLSRVLYNRRSKMNPLWNAIIVGG 158

Query: 114 DKTI--TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI--------AR 163
                   +       +      MA G G   A+   R L+       ++          
Sbjct: 159 FNKDRTPFLKYVDLLGVTYHASTMATGFGSHLAIPLLRNLIPEDKDYVKVDEQQVSKAIE 218

Query: 164 KAMSIAADICVYTNHNIVLETLKVGD 189
            +M +       +  N  +  +K+ +
Sbjct: 219 DSMRVLFYRDARSGENYSVVIIKIDE 244


>gi|256070135|ref|XP_002571401.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
 gi|238652628|emb|CAZ39086.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
          Length = 205

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + + ++ +       IA D +  +    +  +  KV  LG    + GF G + D  T+ +
Sbjct: 7   NGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYV-GFPGLATDNQTVFQ 65

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMI-------LIADKTITLVITGM 124
           RL+ +   Y  +  ++         +    Y R             +        V    
Sbjct: 66  RLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPYVACMD 125

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNI 180
               +   N  +  G+           L     +++E+     + +  A +    +    
Sbjct: 126 LIGCVCEANDFVVSGTCTEQMYGMCETLWEENMNSKELFECISQCILNALNRDAVSGWGA 185

Query: 181 VLETLKVG 188
            +  L+  
Sbjct: 186 RVYLLEKD 193


>gi|114559493|ref|XP_001172323.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 4 isoform 1 [Pan troglodytes]
          Length = 215

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 62/169 (36%), Gaps = 16/169 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD   L + 
Sbjct: 4   GTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYADFQYLKQV 62

Query: 75  L------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-ITLVITGM 124
           L      E+ L    +   R+       A   R  K       M++       + +    
Sbjct: 63  LGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVD 122

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
              +  E   +A G G   A    R ++      +Q  A ++  + M +
Sbjct: 123 MLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRV 171


>gi|322371145|ref|ZP_08045697.1| 20S proteasome A and B subunits [Haladaptatus paucihalophilus
           DX253]
 gi|320549135|gb|EFW90797.1| 20S proteasome A and B subunits [Haladaptatus paucihalophilus
           DX253]
          Length = 178

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 7/178 (3%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L +R D   V+AGD + ++G TV     R+V      +  A  AG          R +
Sbjct: 3   TVLGIRCDDGAVLAGDRRATVGGTVRSDAVRRVF--DYDDAAAAVAGDVGAIEEFDRRFD 60

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGDVLEPENG 133
            +L     +                    +    L+A         +     D L   + 
Sbjct: 61  SELRGDRLERDEPVHIDRIARTAADLAGEIGVDGLVAGTDSDGNAALREIGSDGLVLASD 120

Query: 134 VMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
             A+GSG S A        +    +  E +AR+ +S+ A+    T  NI +   +  D
Sbjct: 121 ATALGSGASVAYGRLEDADAEASLDDTETLARETLSVVAERDPDTGSNIDVLRFEGTD 178


>gi|302757719|ref|XP_002962283.1| hypothetical protein SELMODRAFT_165201 [Selaginella moellendorffii]
 gi|302763553|ref|XP_002965198.1| hypothetical protein SELMODRAFT_406410 [Selaginella moellendorffii]
 gi|300167431|gb|EFJ34036.1| hypothetical protein SELMODRAFT_406410 [Selaginella moellendorffii]
 gi|300170942|gb|EFJ37543.1| hypothetical protein SELMODRAFT_165201 [Selaginella moellendorffii]
          Length = 220

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 61/183 (33%), Gaps = 13/183 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I     DG V++  D  V     V K    K+ +L    ++A  +G + D     E ++K
Sbjct: 4   IFGFVGDGFVILGADTSVVQSIVVQKTTEDKILQLDSHKLMAT-SGEAGDRVIFSEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADK-TITLVITGMGDVL 128
            +  Y  +        A            + K    +  M+   DK     +        
Sbjct: 63  NINLYNFRNGIPLSTAAAASFTRNELAVALRKNPYYVNLMLGGFDKGKGPSLYFMDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVLETL 185
             +    A+G G  + LS          S EE   +A K ++      + + H+ VL+ +
Sbjct: 123 LHQLEKGAVGYGSYFVLSVMDKYFRKGMSVEEGMALADKCIAEIRKRLIASPHSFVLKIV 182

Query: 186 KVG 188
              
Sbjct: 183 DKD 185


>gi|73669981|ref|YP_305996.1| proteasome subunit alpha [Methanosarcina barkeri str. Fusaro]
 gi|121723425|sp|Q469M6|PSA_METBF RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|72397143|gb|AAZ71416.1| proteasome, subunit-alpha [Methanosarcina barkeri str. Fusaro]
          Length = 249

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 54/171 (31%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+  D +++  + V   +  K+ ++      A     +     +  
Sbjct: 34  RGTTAVGIKAADGVVLLVDKRITS-RLVEAESIEKIFQIDDHIGAATSGLVADARSLVDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++ +           ++K     K                +I   D  +  +   
Sbjct: 93  ARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNLPRLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                  E    AIG+G +  +    A      +   A  +   A+  AA+
Sbjct: 153 DPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAAILLGMDALYRAAE 203


>gi|154336879|ref|XP_001564675.1| 20s proteasome beta 7 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061710|emb|CAM38741.1| putative 20s proteasome beta 7 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 220

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 11/151 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +I+ ++ +G V++A D  +S G      N  +++ LG  + +    GS AD   + +R
Sbjct: 4   GGSIVAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGGHSAVCA-TGSYADFQMMAKR 62

Query: 75  LEKKLE---QYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVITGM 124
           +E  +E    Y N       E+        Y +         + +++ A    T +    
Sbjct: 63  VEDNIERQKMYHNVDEMHPNEVFSYLHRSIYQKRCDFEPCLCQMVLIGARDGKTFLAAVD 122

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                 E+  +A G GG  AL   R  +   
Sbjct: 123 DVGTRWEDDCIATGYGGHIALPLLRQALEKN 153


>gi|303287020|ref|XP_003062799.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455435|gb|EEH52738.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 206

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 49/182 (26%), Gaps = 21/182 (11%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVS-LGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             +  +   I+ +     V IA D +     Q     + +K+  +     + G +G+S  
Sbjct: 2   SIMSYNGAAIIAMCGKNCVAIASDLRFGINQQQTTAVDMKKIYEIHPHLYV-GLSGASES 60

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
            ++  +R   +   Y  +  R          +   L         A     +V       
Sbjct: 61  HWSPYDRFAFRHNLYKLREGRDMRPETFANVVSAMLYEKRFGPYYA---EPVVAGLDPVT 117

Query: 128 LEPE-------------NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAAD 171
            EP              +  +  G+          ++       EE+     + +   + 
Sbjct: 118 FEPFITGMDLIGAAAPTDNFVVCGNNEESLFGVCESMYKPDLEPEELFEVIAQCLLAGSG 177

Query: 172 IC 173
             
Sbjct: 178 RD 179


>gi|170063525|ref|XP_001867141.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
 gi|167881115|gb|EDS44498.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
          Length = 290

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 22/161 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G V++A D + + GQ +     +K+  + +  ++   A  +AD   ++ 
Sbjct: 51  HGTTTLGFLFQGEVILAVDSRATGGQFIGSQTVKKIVEINEY-LLGTLADGAADCVKIMS 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
                                  +       ++  M+   DK    +     +       
Sbjct: 110 N--------------------SVYYYKGMGISMRMMLAGYDKHGPQLCYIDSEGTRTPCK 149

Query: 134 VMAIGSGGSY-ALSAARALMSTQNSAEEIARKAMSIAADIC 173
           V   GS  +Y  L        + + A ++ R A+     + 
Sbjct: 150 VSVSGSIYTYGVLGFGDWSDLSDDDAHDLGRHAIYHVTHLD 190


>gi|301103320|ref|XP_002900746.1| proteasome subunit alpha type-5, putative [Phytophthora infestans
           T30-4]
 gi|262101501|gb|EEY59553.1| proteasome subunit alpha type-5, putative [Phytophthora infestans
           T30-4]
          Length = 244

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 24/175 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +R    VV+A + +++    +   +  K+  + K  + A  +G +ADA TL++ 
Sbjct: 34  GTTAIGIRTKEGVVLAVEKRLTS-PLLEPGSIEKIMEVDKH-VGAAMSGITADAQTLIDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAK-----------------DWRMDKYLRNLEAMILIA--DK 115
              +   +           A                  +    K  R     +L+A  D+
Sbjct: 92  ARVEATNHWFSYNEPVRVQALTQSICDLALSFGEGSDENNHKQKMSRPFGVALLLAGVDE 151

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
               +               AIGSG   AL+  +   + + +   AE +A  A+ 
Sbjct: 152 AGPQLFYSEPSGTYWPVKAHAIGSGSEGALNNLKDGYTEELTLQEAETLAIGALK 206


>gi|146099871|ref|XP_001468773.1| 20s proteasome beta 7 subunit [Leishmania infantum]
          Length = 220

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 17/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++ +G V++A D  +S G      N  +++ LG  + +    GS AD   + ++
Sbjct: 4   GGSVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCA-TGSYADFQMMTKQ 62

Query: 75  LE---KKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVITGM 124
           +E   ++   Y N    S  E+        Y +         + + +    + T +    
Sbjct: 63  VEDNIERQRMYHNVDELSPSEVFSYLHRSIYQKRCDFEPCLCQMVFIGFRDSETFLAGVD 122

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS------AEEIARKAMSI 168
                 E+  +A G G   AL   R  +    S      A +I    + +
Sbjct: 123 DVGTRWEDDCVATGYGAYIALPLLRQALEKNPSGLSRAQAVQILTDCLRV 172


>gi|29841035|gb|AAP06048.1| similar to NM_017284 proteasome (prosome, macropain) subunit, beta
           type, 2 in Rattus norvegicus [Schistosoma japonicum]
 gi|226471306|emb|CAX70734.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
 gi|226471308|emb|CAX70735.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
 gi|226489230|emb|CAX75759.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
 gi|226489232|emb|CAX75760.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
 gi|226489234|emb|CAX75761.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
          Length = 201

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 49/155 (31%), Gaps = 11/155 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ ++ +  V++A D + +     +K +  K+ +     ++A   G S D     E +++
Sbjct: 4   IIGIKTNDFVLLAADMRCTHSILTIKHDESKMFKF-SKRVLAAVCGESGDTSQFSEFIQQ 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIADKTI---TLVITGMGDV 127
            ++ Y  +        A        +             +LIA         +       
Sbjct: 63  NMQLYEIRNGYELTPNAAANFTRNNMAESLRSRSPYFVNLLIAGFDSHTGPELYFLDYLA 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
              +      G G   +LS    +     + +E  
Sbjct: 123 SLIKVPFAVHGYGALVSLSILDRMHRPDMTVDEAV 157


>gi|50424791|ref|XP_460985.1| DEHA2F14322p [Debaryomyces hansenii CBS767]
 gi|49656654|emb|CAG89345.1| DEHA2F14322p [Debaryomyces hansenii]
          Length = 275

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 70/207 (33%), Gaps = 23/207 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T++++++    +++A D   S G  +   N  ++ R+GK   I G +G 
Sbjct: 43  MNTQQPI-ITGTSVVSLKFKDGIIMAADNLGSYGSLLRFTNMERLLRVGK-ETIVGVSGD 100

Query: 65  SADAFTLLERLEKK------LEQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA 113
            +D   L   LE+        +      LR+             R  K      A+++  
Sbjct: 101 ISDMQQLERLLEELETTEEVYDNDGGHNLRAPHVHEYLSKVLYNRRSKMNPLWNALVVGG 160

Query: 114 --DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEIAR 163
             D     +       +   +  ++ G G   A+   R L+             A +   
Sbjct: 161 FNDDGTPFLRYVDLLGVTYGSSAISTGFGSHLAVPLLRQLVPKDPDYENVTEEQARDAIL 220

Query: 164 KAMSIAADICVYTNHNIVLETLKVGDE 190
             M +       +     L T+K G+E
Sbjct: 221 NCMRVLFYRDARSLDKFSLVTIKKGEE 247


>gi|154336885|ref|XP_001564678.1| 20s proteasome beta 7 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061713|emb|CAM38744.1| putative 20s proteasome beta 7 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 220

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 11/151 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +I+ ++ +G V++A D  +S G      N  +++ LG  + +    GS AD   + +R
Sbjct: 4   GGSIVAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGGHSAVCA-TGSYADFQMVAKR 62

Query: 75  LEKKLE---QYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVITGM 124
           +E  +E    Y N       E+        Y +         + +++ A    T +    
Sbjct: 63  VEDNIERQKMYHNVDEMHPNEVFSYLHRSIYQKRCDFEPCLCQMVLIGARDGKTFLAAVD 122

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                 E+  +A G GG  AL   R  +   
Sbjct: 123 DVGTRWEDDCIATGYGGHIALPLLRQALEKN 153


>gi|294893111|ref|XP_002774336.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
 gi|239879674|gb|EER06152.1| proteasome B type subunit, putative [Perkinsus marinus ATCC 50983]
          Length = 290

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 13/162 (8%)

Query: 40  TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL----RSSVELAK 95
            V    +RKV RL     +   +GS+AD   L  +++  L  + N L           A 
Sbjct: 118 YVANRVSRKVTRLHDRIFVC-RSGSAADTQFLSSKVKYFLNAHANDLPLDRLPKVKTAAN 176

Query: 96  DWRM--DKYLRNLEAMILIADKTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
             R+      + L A +++A         V +        +  +   GSG +Y       
Sbjct: 177 LMRLLAYNNKQYLTAGLIVAGWDQTEGPQVYSIPLGGTIIKQNIATGGSGSTYITGLVDH 236

Query: 151 LMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
           L     S   AE+   KA++ A      +   I + T+   D
Sbjct: 237 LYRPDMSREEAEDFVAKAVAHAMARDGSSGGVIRVTTVTEKD 278


>gi|196004606|ref|XP_002112170.1| hypothetical protein TRIADDRAFT_23895 [Trichoplax adhaerens]
 gi|190586069|gb|EDV26137.1| hypothetical protein TRIADDRAFT_23895 [Trichoplax adhaerens]
          Length = 259

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 61/191 (31%), Gaps = 18/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V   G VVIA D   S G      +  ++ ++    +  G +G  AD   + + 
Sbjct: 47  GTSVLGVTFTGGVVIAADTLGSYGSLARFRDISRLLKV-NEKVAIGASGDYADFQFIRDI 105

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGDVLEPE 131
           + +K L+            +A    + +  Y R  +   L  +  +       G  L   
Sbjct: 106 INQKVLDGKCLNDNYCYSPVAIHTWLTRILYNRRTKINPLWNNIIVGGYDENEGSYLGYV 165

Query: 132 NGV--------MAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADICVYTN 177
           + +        +A G G   A    R          T+  A     + M +       + 
Sbjct: 166 DKLGVAYQAPTIATGYGSYIAQPLLRQSYESNNNNFTEEQALSAIERCMRVLLYRDGRSG 225

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 226 NQYEVAIITKD 236


>gi|3421123|gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis thaliana]
          Length = 246

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 11/159 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V++A D   S G T+   N  +V+ +GK +++ G +G  +D   +L  
Sbjct: 31  GTSVVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLL-GASGEISDFQEILRY 89

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILI-------ADKTITLVITGM 124
           L E  L         S         + +  Y R  +   L             + +    
Sbjct: 90  LDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNGKSYLGMVS 149

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
              +  E+  +A G G   A    R       S E+  +
Sbjct: 150 MIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVK 188


>gi|297844204|ref|XP_002889983.1| hypothetical protein ARALYDRAFT_888660 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335825|gb|EFH66242.1| hypothetical protein ARALYDRAFT_888660 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 132

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 1/93 (1%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++A D + S+G  +   + +K+  +    ++   AG +AD       L  K   +     
Sbjct: 1   MVAADSRASMGGYISSQSVKKIIEINPY-MLGTMAGGAADCQFWHRNLGIKCRLHALANK 59

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           R          +   L +   M L     I   
Sbjct: 60  RRISVSGASKLLANMLYSYRGMGLSVGTMIAGW 92


>gi|159474650|ref|XP_001695438.1| 20S proteasome beta subunit, type 4 [Chlamydomonas reinhardtii]
 gi|158275921|gb|EDP01696.1| 20S proteasome beta subunit, type 4 [Chlamydomonas reinhardtii]
          Length = 285

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 11/171 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG---FAGSSADAFTL 71
            T++L V+    V++  D   + G T    + +++ R+    ++A     +     +  L
Sbjct: 68  GTSVLAVKYKDGVLLGCDTLGAYGSTKRYKSTQRLYRVNDKCVVAAGGEISDFQHISNLL 127

Query: 72  LERLEKKLEQYPN-----QLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT--LVITGM 124
            E                Q + S +      R +K      ++++   +      +    
Sbjct: 128 DELTTDDYRIDDGIQLTPQQVYSYLCRVMYNRRNKMDPLWNSLVVGGVQPDGSQFLGMVG 187

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                  +  +  G     A    R       S EE A   +  A  +C Y
Sbjct: 188 MIGTHYTDSHVTTGFANQLARPLFRERQRDDMSEEE-ALNLLYDAMRVCYY 237


>gi|27525440|emb|CAD47833.1| 20S proteasome alpha 5 subunit [Ceratitis capitata]
          Length = 241

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + + +    V   +  K+ ++ +       +G +ADA TL++R
Sbjct: 34  GSTAIGICTSSGVVLAAEKRSTSELMVSS-SVEKILQVDRHIGCVT-SGLTADARTLIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKY----------------LRNLEAMILIADKTIT 118
              + + Y      S    +    +                      +  +    ++ + 
Sbjct: 92  ARVECQNYWFIYNESMPIESCAQAVSAMAIQFGDSSDGGSAMSRPFGVAMLFAGINEGVP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +            G  AIGSG   A    +       S +E  + AMSI
Sbjct: 152 QLWHMDPSGTYVRYGAKAIGSGSEGAQQTLKGEYHKDMSLQEATKLAMSI 201


>gi|52548238|gb|AAU82106.1| 20S proteasome beta 4 subunit [Triticum aestivum]
          Length = 213

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           ++ V      V+A D        V K +  K+  L     + G +G   D     E ++K
Sbjct: 4   VIGVVGSDFAVVAADTSAVQSILVHKTDEDKIMLLDSHK-LMGASGEPGDRVQFTEFIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            L  Y  +        A            + K   ++  ++   DK     +        
Sbjct: 63  NLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  + LS    L     + EE  
Sbjct: 123 LHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEAV 156


>gi|71746468|ref|XP_822289.1| proteasome subunit alpha 2 [Trypanosoma brucei TREU927]
 gi|12229939|sp|Q9U793|PSA2_TRYBB RecName: Full=Proteasome subunit alpha type-2; AltName: Full=20S
           proteasome subunit alpha-2
 gi|6224689|gb|AAF05906.1|AF148125_1 20S proteasome alpha 2 subunit [Trypanosoma brucei brucei]
 gi|70831957|gb|EAN77461.1| proteasome alpha 2 subunit, putative [Trypanosoma brucei]
          Length = 231

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    VVIA + + +           KV  L    +   ++G   D   L++
Sbjct: 29  KGTTALGVKATDGVVIAAEKKTTS-PLADSLTLHKVFALDDH-VGCTYSGIGPDCRVLVD 86

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVIT 122
              +  ++Y           QL+R    L +++     +R     +L+  AD     +  
Sbjct: 87  AARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQ 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        +IG G   A +      + +   E+    A+
Sbjct: 147 LDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTAL 190


>gi|288930694|ref|YP_003434754.1| proteasome endopeptidase complex, subunit alpha [Ferroglobus
           placidus DSM 10642]
 gi|288892942|gb|ADC64479.1| proteasome endopeptidase complex, alpha subunit [Ferroglobus
           placidus DSM 10642]
          Length = 241

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 58/189 (30%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + V+    VV+  D +V   + +      K+ ++ +    A     +     +  
Sbjct: 33  RGATAIGVKTKEGVVLLADRRV-ASRLLEADTIEKIYKIDEHICAATSGLVADARVLIDR 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA--------MILIADKTITLVITGM 124
            RLE ++ +       S  ELAK     K               ++L        +    
Sbjct: 92  ARLEAQINRLTYDEPISVKELAKRICDFKQQYTQYGGVRPFGVSLLLAGVDEKPRLYETD 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK---AMSIAADICVYTNHNIV 181
                 E    AIGS  +  +           + +E       AM  A +  +     I 
Sbjct: 152 PSGAMLEYKATAIGSERNVVMEYFEKEYREDLTLDEAIIHGLIAMKKAIEADLM-PEGIE 210

Query: 182 LETLKVGDE 190
           +  ++V D+
Sbjct: 211 IGIVRVEDK 219


>gi|320581718|gb|EFW95937.1| Beta 7 subunit of the 20S proteasome [Pichia angusta DL-1]
          Length = 274

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 62/196 (31%), Gaps = 26/196 (13%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                 + +  T+++ VR    VV+A D   + G  +   +  ++ R+G    I G +G 
Sbjct: 43  MHTQQPM-ITGTSVIAVRYKDGVVMAADNMGAYGSLMKLDDVERIIRVGS-ETIVGISGD 100

Query: 65  SADAFTLLERL-----EKKLEQYPNQLLRSSVE----LAKDWRMDKYLRNLEAMILIADK 115
            +D   L   L     E   +   + L  S V          R  K      A I+    
Sbjct: 101 ISDLQYLERILDDLAVEDSYDMEQDNLKASYVHEYLTRVLYNRRSKMDPLWNACIVAGFD 160

Query: 116 T--ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS--------TQNSAEEIARKA 165
                 +       +   +  +A G G   A+   R            T+  A  + +  
Sbjct: 161 EEGEPFMKYVDLLGVSYASPSLATGFGAHLAIPLLRKKADTMKDVEKLTKEDAVSLVKDC 220

Query: 166 MSI-----AADICVYT 176
           M I     A  +  YT
Sbjct: 221 MKILFYRDARSLDKYT 236


>gi|241955579|ref|XP_002420510.1| proteasome beta-type subunit, putative [Candida dubliniensis CD36]
 gi|223643852|emb|CAX41589.1| proteasome beta-type subunit, putative [Candida dubliniensis CD36]
          Length = 278

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 68/206 (33%), Gaps = 23/206 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T+++  +    V++A D   S G  +   N  ++ ++GK  ++ G +G 
Sbjct: 41  MNTQQPI-ITGTSVIASKFKNGVIMAADHVGSYGSLLRFNNIERLIKVGKETVV-GISGD 98

Query: 65  SADAFTLLERLEKK------LEQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA 113
            +D   ++  L++        +      LR+             R  K      A+I+  
Sbjct: 99  ISDLQYIVRLLDELEIEEEVYDNDGGDYLRAPNVHEYLSRVLYNRRSKMNPLWNAVIVGG 158

Query: 114 DKTI--TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI--------AR 163
                   +       +      +A G G   A+   R L+       ++          
Sbjct: 159 FNKDRTPFLKYVDLLGVTYHASTIATGFGSHLAIPLLRNLIPEDKDYVKVDEQQVSKAVE 218

Query: 164 KAMSIAADICVYTNHNIVLETLKVGD 189
            +M +       +  N  +  +K+ +
Sbjct: 219 DSMKVLFYRDARSGENYSVVIIKIDE 244


>gi|320168981|gb|EFW45880.1| proteasome alpha 4 subunit [Capsaspora owczarzaki ATCC 30864]
          Length = 283

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 54/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTL 71
           HA T L +     ++IA + +V+       + + K+ +L       +AG    +      
Sbjct: 49  HAGTCLGILTSEGIIIAAERRVTSKLLEQNSLSEKIYKLNDHMATSVAGITADANILINW 108

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           +    ++     +      QL++   ++ + +     LR      L A         +  
Sbjct: 109 MRLEAQRYMLSFHEPIPCEQLVQRLCDMKQSYTQYGGLRPFGVSFLYAGWDQHFGFQLYQ 168

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                         IG+G     S  +     + +   A+ +A K +
Sbjct: 169 SDPSGNYGGWKATCIGAGSQSVQSLLKQDYKEELTLQQAKLLAIKVL 215


>gi|302854180|ref|XP_002958600.1| hypothetical protein VOLCADRAFT_108195 [Volvox carteri f.
           nagariensis]
 gi|300256061|gb|EFJ40337.1| hypothetical protein VOLCADRAFT_108195 [Volvox carteri f.
           nagariensis]
          Length = 284

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 12/171 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V++  D   + G T    N +++  +    ++A   G  +D   +   
Sbjct: 68  GTSVMAIKYKDGVLVGCDTLGAYGSTKRYKNTQRIYHVNSKCVVAA-GGEISDFQYITNL 126

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------KTITLVITGM 124
           L E   + Y                + +  Y R  +   L          +    +    
Sbjct: 127 LDELTTDDYRTDDGIELTPQEVHSYLCRVMYNRRNKFDPLWNSLVVGGVQEGKPFLGMIG 186

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                  +  +  G     A    R       S EE A K M  A  +C Y
Sbjct: 187 MIGTHYTDSHVTTGFANQLARPLFRERQQDDMSEEE-ALKLMYDALRVCYY 236


>gi|124512686|ref|XP_001349476.1| proteasome beta-subunit [Plasmodium falciparum 3D7]
 gi|6650323|gb|AAF21797.1| proteasome beta-subunit [Plasmodium falciparum]
 gi|23499245|emb|CAD51325.1| proteasome beta-subunit [Plasmodium falciparum 3D7]
          Length = 265

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 58/205 (28%), Gaps = 52/205 (25%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    ++IA D + S G      N  ++ ++     + GF+G  ADA  L E 
Sbjct: 9   GTSVIAIKYKHGIMIAADRKASYGSYAKFQNVERIFKI-NNKTVMGFSGELADAQYLHEL 67

Query: 75  LEKK------------------------------------------------LEQYPNQL 86
           L +K                                                 ++Y N  
Sbjct: 68  LTRKNINNLSEKKRKEDMYTPQHYHSYVSRVFYVRKNRIDPLFNNIIIAGINSQKYDNND 127

Query: 87  LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
               +   K+   ++             K    +           +  +  G    +AL+
Sbjct: 128 DNVLLYTNKNNDDEQNEYKNNEEYKEIHKDDLYIGFVDMHGTNFCDDYITTGYARYFALT 187

Query: 147 AARALMSTQNSAEE---IARKAMSI 168
             R       + EE   +  + + I
Sbjct: 188 LLRDHYKDNMTEEEARILINECLRI 212


>gi|15220961|ref|NP_175788.1| PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|145325425|ref|NP_001077717.1| PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|297853172|ref|XP_002894467.1| hypothetical protein ARALYDRAFT_474517 [Arabidopsis lyrata subsp.
           lyrata]
 gi|12229903|sp|O81149|PSA5A_ARATH RecName: Full=Proteasome subunit alpha type-5-A; AltName: Full=20S
           proteasome alpha subunit E-1
 gi|6056394|gb|AAF02858.1|AC009324_7 20S proteasome subunit PAE1 [Arabidopsis thaliana]
 gi|3421087|gb|AAC32060.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
 gi|18252873|gb|AAL62363.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
 gi|21387063|gb|AAM47935.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
 gi|21554176|gb|AAM63255.1| Proteasome subunit alpha type 5-1 (20S proteasome alpha subunit E1)
           [Arabidopsis thaliana]
 gi|297340309|gb|EFH70726.1| hypothetical protein ARALYDRAFT_474517 [Arabidopsis lyrata subsp.
           lyrata]
 gi|332194888|gb|AEE33009.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
 gi|332194889|gb|AEE33010.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
          Length = 237

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V+    VV+A + +++    +  ++  K+  +      A  +G  ADA TL+E 
Sbjct: 34  GSTAIGVKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDDHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   S   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|321263655|ref|XP_003196545.1| proteasome subunit beta type 4 [Cryptococcus gattii WM276]
 gi|317463022|gb|ADV24758.1| Proteasome subunit beta type 4, putative [Cryptococcus gattii
           WM276]
          Length = 280

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 64/212 (30%), Gaps = 29/212 (13%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           +      + +  T++L ++ D  V+IA D   S G      + +++  LGK  ++ G AG
Sbjct: 43  VSHTQQPL-VTGTSVLGIKFDKGVMIAADNLGSYGSLARFRDIQRLHPLGKHTLL-GVAG 100

Query: 64  SSADAFTLLERLEKKLEQYP----NQLLRSSVELAKDWRMDK--YLRNLEAMILIA---- 113
             +D   L   L+  L +           S         +    Y R  +   +      
Sbjct: 101 DMSDYQWLKRELDGLLREEDALSLTDSHPSLSPSNIYTLLSNLFYARRSKVDPIWNAILV 160

Query: 114 -----DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------TQN 156
                 K  + +              +A G G   A    R                TQ 
Sbjct: 161 GGWDDTKKESFLAYVDLLGTTYSAPTLATGFGAHLAQPLLRETYEAKAGIDGTGPLLTQE 220

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            AE++    M +       + +   + T+   
Sbjct: 221 EAEKLIDDCMKVLFYRDARSINKYQVATITEE 252


>gi|123382702|ref|XP_001298721.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121879369|gb|EAX85791.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 191

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 15/163 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           +I+ ++    V+IA D  VS     M  N  ++ +L   + +A  +G + D   L E L+
Sbjct: 3   SIVGLQGPDWVLIAADSSVSSSIICMSENYDRIAQLDDRHALA-MSGETGDCLQLSEFLQ 61

Query: 77  KKLEQYPNQLLRSSV----------ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
             +  Y  +                 +AK  R   Y  N   M+L        +      
Sbjct: 62  GNVALYKFRNGVELSSDALAHFIRHTMAKAVRKSPYEVN---MLLSGYDGKPHLYFMDYL 118

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                    A G    + +S          + EE  ++ M +A
Sbjct: 119 GTLQSIPYGAQGYCQYFVMSVFDKHFKEGMTLEE-GKELMKLA 160


>gi|290999893|ref|XP_002682514.1| 20S proteasome, A and B subunits [Naegleria gruberi]
 gi|284096141|gb|EFC49770.1| 20S proteasome, A and B subunits [Naegleria gruberi]
          Length = 209

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 11/157 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T++ ++     ++A D   S    +MK    K+  +   NI+    G   D    +E 
Sbjct: 2   GDTVIGLKGKDFTLLAADTTASFSIILMKDTEDKITAVPNQNILIAAQGEQGDRVQFVEF 61

Query: 75  LEKKLEQYPNQLLRSSV----------ELAKDWRMDKYLRNLEAMIL-IADKTITLVITG 123
           + K L  Y  +   +            ELAK  R   Y  N+    +   +     +   
Sbjct: 62  ITKNLNLYRLRNDTNLSVKASAHFVRQELAKALRSGPYQTNIMVGGVDDIEGAKPELYYI 121

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                  E    A G G  + LS          +  E
Sbjct: 122 DYLSSMQEVKYGAHGYGSYFTLSILDKHYKDGMNLNE 158


>gi|255631716|gb|ACU16225.1| unknown [Glycine max]
          Length = 232

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 11/159 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ ++    +++A D   S G T+   +  +++ +GK +++ G +G  +D   +L  
Sbjct: 17  GSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERIKPIGKHSLL-GASGEISDFQEILRY 75

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILI-------ADKTITLVITGM 124
           L E  L         S         + +  Y R  E   L               +    
Sbjct: 76  LDELILYDNMWDDGNSLGPKEVHNYLTRVMYNRRNEFNPLWNALVLGGVKNGQKYLGMVN 135

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
              +  E+  +A G G   A    R       + EE  +
Sbjct: 136 MIGINFEDDHVATGLGNHLARPILRDEWHENLTFEEGVK 174


>gi|217072746|gb|ACJ84733.1| unknown [Medicago truncatula]
          Length = 249

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 59/159 (37%), Gaps = 11/159 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ ++    +++A D   S G T+   +  +++ +GK +++ G +G  +D   ++  
Sbjct: 17  GSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERLKPIGKHSLL-GASGEISDFQEIMRY 75

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------KTITLVITGM 124
           L E  L         S         + +  Y R  +   L          K    + T  
Sbjct: 76  LDELILIDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLGGVKKGQKYLGTVS 135

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
              +  E+  +A G G   A    R   +   + EE  +
Sbjct: 136 MIGVNYEDNHVATGLGNHLARPILRDEWNENLTFEEGVK 174


>gi|45188273|ref|NP_984496.1| ADR401Cp [Ashbya gossypii ATCC 10895]
 gi|44983117|gb|AAS52320.1| ADR401Cp [Ashbya gossypii ATCC 10895]
          Length = 279

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 55/169 (32%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV A +  ++    V   N +   +    +I   ++G   D   L+ 
Sbjct: 33  NGATSIGIRCKDGVVFAVEKLITSKLLVPHKNKKI--QTVDKHIGCVYSGLMPDGRHLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
              ++   +     +     A   R+ +Y+             + A+    D+    +  
Sbjct: 91  IGRQEAADFRKYYRQPIPLPAFADRVGQYVQAHTLYNSVRPFGIIAIFGGVDEKGPHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSI 168
                        A G G   A +    L+    ++ SA +  ++A  I
Sbjct: 151 LEPSGAYWGYRGAAAGKGRQAAKAELEKLIGNDKSELSARDAVKEAARI 199


>gi|253748642|gb|EET02673.1| Proteasome subunit beta type 4 precursor [Giardia intestinalis ATCC
           50581]
          Length = 217

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 24/193 (12%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +   T++ V     V++A D  ++ G T      +++  +G    + GF G  AD    +
Sbjct: 5   LTGGTVVAVVHKDGVLMAADTVLNYGSTRRTEXYKRIVPIGVHT-LIGFTGDEADFKDSI 63

Query: 73  ERLEKKLEQ--YPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVIT 122
             LE    +         S+ E+        Y   LE   +                +  
Sbjct: 64  YTLESMHREARCHGMHPPSTKEIHGFLATRNYSSRLEMDPIYNGYIVGGYEPGDGPYIGV 123

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS------IAAD-- 171
                 +      A G G  YA+   R       S   A  +  +++        AA   
Sbjct: 124 VDIRGTQFTASFFATGMGRHYAMPVLREGWRQDISRDEAVALLLESLKTLALNDAAAGSS 183

Query: 172 --ICVYTNHNIVL 182
             IC  TN    +
Sbjct: 184 FMICEATNDGTHI 196


>gi|3915806|sp|P34067|PSB4_RAT RecName: Full=Proteasome subunit beta type-4; Short=Proteasome beta
           chain; AltName: Full=Macropain beta chain; AltName:
           Full=Multicatalytic endopeptidase complex beta chain;
           AltName: Full=Proteasome chain 3; Short=RN3; Flags:
           Precursor
          Length = 263

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ D  VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 46  QNPM-VTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTML-GASGDYAD 103

Query: 68  AFTLLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
              L + L + +   E + +    S   +        Y R  +   L   K I     G 
Sbjct: 104 FQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTKVIGGYAGGE 163

Query: 125 GDVLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
             +          E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 164 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 219


>gi|125564290|gb|EAZ09670.1| hypothetical protein OsI_31953 [Oryza sativa Indica Group]
          Length = 178

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 41/157 (26%), Gaps = 24/157 (15%)

Query: 55  GNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
                  +G   D   L + L  +   Y +Q  +     A    +   L         A 
Sbjct: 9   DKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAF 68

Query: 115 KTITLV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMST------------ 154
             +  +         T          G  A G+G +  +      + +            
Sbjct: 69  NVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAV 128

Query: 155 ----QNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
               +  A ++ +   + A +  +YT   + +  +  
Sbjct: 129 TPLSETEAVDLVKDVFASATERDIYTGDKLEIVVINK 165


>gi|226499840|ref|NP_001149918.1| proteasome subunit alpha type 5 [Zea mays]
 gi|242071701|ref|XP_002451127.1| hypothetical protein SORBIDRAFT_05g024560 [Sorghum bicolor]
 gi|195635461|gb|ACG37199.1| proteasome subunit alpha type 5 [Zea mays]
 gi|223946287|gb|ACN27227.1| unknown [Zea mays]
 gi|241936970|gb|EES10115.1| hypothetical protein SORBIDRAFT_05g024560 [Sorghum bicolor]
          Length = 237

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKDGVVLAVEKRVTS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESSTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   + + +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|257215971|emb|CAX83135.1| 20S proteasome subunit beta 4 [Schistosoma japonicum]
          Length = 184

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 49/155 (31%), Gaps = 11/155 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ ++ +  V++A D + +     +K +  K+ +     ++A   G S D     E +++
Sbjct: 4   IIGIKTNDFVLLAADMRCTHSILTIKHDESKMFKF-SKRVLAAVCGESGDTSQFSEFIQQ 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIADKTI---TLVITGMGDV 127
            ++ Y  +        A        +             +LIA         +       
Sbjct: 63  NMQLYEIRNGYELTPNAAANFTRNNMAESLRSRSPYFVNLLIAGFDSHTGPELYFLDYLA 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
              +      G G   +LS    +     + +E  
Sbjct: 123 SLIKVPFAVHGYGALVSLSILDRMHRPDMTVDEAV 157


>gi|237844335|ref|XP_002371465.1| proteasome A-type and B-type domain-containing protein [Toxoplasma
           gondii ME49]
 gi|211969129|gb|EEB04325.1| proteasome A-type and B-type domain-containing protein [Toxoplasma
           gondii ME49]
 gi|221481258|gb|EEE19655.1| proteasome A-type and B-type domain-containing protein, putative
           [Toxoplasma gondii GT1]
          Length = 266

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 27/185 (14%)

Query: 16  TT--ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
           TT  +L +  +  +++  D   S G+     +A +   LG    +A  G           
Sbjct: 34  TTSSVLGITYNNGILLVADTLASYGRMTRFKDASRFFTLGSHTAVASTGDYSDHQMMERT 93

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD----------------- 114
           L R   K   + +  +R++ + A       Y +                           
Sbjct: 94  LSRYALKDFLHDDNSVRTAHQYAALLSRLMYQKRSRMDPWWLSVVVAGYQGERSEAREVS 153

Query: 115 ---KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
              K    +          E  V+A G G  +A++  R       S EE   +  + M I
Sbjct: 154 EEQKKPFTLGYVDMYGTFYEEEVIATGLGRYFAVTLMRNRHRPDMSEEEARQLLEECMRI 213

Query: 169 AADIC 173
                
Sbjct: 214 LFYRD 218


>gi|255626665|gb|ACU13677.1| unknown [Glycine max]
          Length = 233

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 57/159 (35%), Gaps = 11/159 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ ++    +++A D   S G T+   +  +++ +GK +++ G +G  +D   +L  
Sbjct: 17  GSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERIKPIGKHSLL-GASGEISDFQEILRY 75

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILI-------ADKTITLVITGM 124
           L E  L     +   S         + +  Y R  +   L               +    
Sbjct: 76  LDELILYDNMWEDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNALVLGGVKNGQKYLGMVN 135

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
              +  E+  +A G G   A    R       + EE  +
Sbjct: 136 MIGINFEDNHVATGLGNHLARPILRDEWHENLTFEEGVK 174


>gi|21228722|ref|NP_634644.1| proteasome subunit alpha [Methanosarcina mazei Go1]
 gi|23821980|sp|Q8PTU1|PSA_METMA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|20907231|gb|AAM32316.1| Proteasome, subunit-alpha [Methanosarcina mazei Go1]
          Length = 249

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 62/172 (36%), Gaps = 16/172 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+  D +++  + V   +  K+ ++      A  +G  ADA +L++
Sbjct: 34  RGTTAVGIKAADGVVLLVDKRITS-RLVEAESIEKIFQIDDHIGAAT-SGLVADARSLVD 91

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
           R   + +              + +   +  + +     +R     +LIA  D     +  
Sbjct: 92  RARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFE 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                   E    AIG+G +  +    A      +   A  +   A+  AA+
Sbjct: 152 TDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKAAE 203


>gi|330039045|ref|XP_003239771.1| 26S proteasome SU [Cryptomonas paramecium]
 gi|327206696|gb|AEA38873.1| 26S proteasome SU [Cryptomonas paramecium]
          Length = 201

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/202 (9%), Positives = 55/202 (27%), Gaps = 23/202 (11%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +      ++ +     + +A D +             ++ ++    +I G  G   D  +
Sbjct: 1   MNYTGGCVVAMGGKKCIALACDLRFGNEYFTCGCATPRIFKI-NKKVIIGMTGLFGDISS 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI-TGMGDVLE 129
           + + LE K+  +  +   S         +   L       L  +  +  +       +  
Sbjct: 60  VKQDLEYKMSLHSFEKNLSVQFFNICNILSNLLYQKRFCPLFLENIVCGLDEEFEPTITS 119

Query: 130 PEN--------GVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI-C---- 173
            +             +G+                       EI    +  A++  C    
Sbjct: 120 MDILGSSVFSSNFAIVGTCNQNLYGLCEMFWKPGLDFTELFEIIVHCLITASNRNCLSGW 179

Query: 174 -----VYTNHNIVLETLKVGDE 190
                + + + IV + +K   +
Sbjct: 180 GCMVKIMSPNGIVTKIIKTKVD 201


>gi|269866187|ref|XP_002652186.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
           bieneusi H348]
 gi|220062998|gb|EED41871.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
           bieneusi H348]
          Length = 176

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 14/170 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T+ +  R    ++IA D  VS G+  +       R     N++  F G   D   +   L
Sbjct: 5   TSTIAFRFREGIIIAADTAVSYGRLSL---CHMNRIFVFQNVLVAFNGFVGDFHDVKRWL 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT--------ITLVITGMGDV 127
           E ++     +    +  + K  ++  Y R  +                    +       
Sbjct: 62  EDEIR--DEKREIDARGIFKLIQLYLYTRRSQMTPKACSVVVAGLEKTQHLFLGCITSKG 119

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTN 177
           +  E+ V++ G    +     R       S ++ A+  +  A  I VY N
Sbjct: 120 VFWEDNVISTGFAAHFITPLLRTHPVNTLSLDQ-AKSLIKEATKIMVYKN 168


>gi|242036903|ref|XP_002465846.1| hypothetical protein SORBIDRAFT_01g046910 [Sorghum bicolor]
 gi|241919700|gb|EER92844.1| hypothetical protein SORBIDRAFT_01g046910 [Sorghum bicolor]
          Length = 237

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKDGVVLAVEKRVTS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESSTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   + + +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLEEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|123445636|ref|XP_001311576.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121893391|gb|EAX98646.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 191

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 15/163 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           +I+ ++    V+IA D  VS     M  N  ++ +L   + +A  +G + D   L E L+
Sbjct: 3   SIVGLQGPDWVLIAADSSVSSSIICMSENYDRIAQLDDRHALA-MSGETGDCLQLSEYLQ 61

Query: 77  KKLEQYPNQLLRSSV----------ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
             +  Y  +                 +AK  R   Y  N   M+L        +      
Sbjct: 62  GNVALYKFRNGVELSSDALAHFIRHTMAKAVRKSPYEVN---MLLSGYDGKPHLYFMDYL 118

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                    A G    + +S          + E+  ++ M +A
Sbjct: 119 GTLQSIPYGAQGYCQYFVMSVFDKHYKEGLTLED-GKELMKLA 160


>gi|294861446|gb|ADF45320.1| proteasome subunit beta type 7 [Pagothenia borchgrevinki]
          Length = 153

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 86  LLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPENGVMAIGS 139
             R       +  + + L   +  I  A      D     + +        +   + +GS
Sbjct: 3   TGRVPRVATANRMLKQMLFRYQGHIGAALVLGGVDCNGPHLYSIYPHGSTDKLPYVTMGS 62

Query: 140 GGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLETLKVGD 189
           G   A++              A+ + R A  IAA I   + +  NI L  +  G+
Sbjct: 63  GSLAAMAVFEDRYKPDMEEEDAKRLVRDA--IAAGIFNDLGSGSNIDLCVITKGN 115


>gi|85000827|ref|XP_955132.1| proteasome subunit [Theileria annulata strain Ankara]
 gi|65303278|emb|CAI75656.1| proteasome subunit, putative [Theileria annulata]
          Length = 229

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 18/171 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +I+ ++ +  V++  D + SLG+     N +++  +    + A  +G +AD   L   
Sbjct: 7   GASIIAMKYNDGVLMMTDTKWSLGRMARYMNVKRLEGVSSNTLFAT-SGDAADHQYLTRI 65

Query: 75  LEK-----KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITLV 120
           L+       LE   +                ++L +    +                + +
Sbjct: 66  LKHAVHTDLLEHNNDPSEALLNAEMLLNYTSRFLYHRRTKLDPVLVSAVVGGFANGKSFL 125

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
                   +  +  +  G G  +A+   R       +   A+E+A K M +
Sbjct: 126 GYTDYYGTKYTDDFVVTGLGKYFAIGPLREEHRNDFTLSEAKELALKCMRV 176


>gi|195343623|ref|XP_002038395.1| GM10644 [Drosophila sechellia]
 gi|194133416|gb|EDW54932.1| GM10644 [Drosophila sechellia]
          Length = 268

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 17/167 (10%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L +R D  V++A D  VS G      N  +V ++ K  ++ G +G  AD  ++   +++
Sbjct: 60  VLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKINKNILLGG-SGDFADIQSIKRNIDQ 118

Query: 78  KLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGD 126
           K+ +     + +      LA       Y R      L  D        +    +      
Sbjct: 119 KMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLR 178

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
               E+ V+A G     A+   R             A E+ R  M +
Sbjct: 179 GRSYEDYVVATGFARHLAIPLVREKKPKDRDFTAVEASELIRTCMEV 225


>gi|255074697|ref|XP_002501023.1| predicted protein [Micromonas sp. RCC299]
 gi|226516286|gb|ACO62281.1| predicted protein [Micromonas sp. RCC299]
          Length = 280

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 12/164 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT+L  +    V+IA D     G T    +  +++++   + I  F G  +D   ++  
Sbjct: 65  GTTVLGCKYKDGVMIACDTLCCYGSTKRYKSVERIKKV-NSSTIISFTGELSDFHYIVSL 123

Query: 75  LEKK-LEQYPNQLLR--SSVELAKDWRMDKYLRNLEAMILIAD-------KTITLVITGM 124
           LE+     Y        +  E+        Y R  +   L             T + T  
Sbjct: 124 LEELDTTDYCEDDGSELAPWEIHSYLCRVMYNRRNKFDPLWNSLVVAGVKHGRTFLGTVG 183

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 E+  +A G G   A    R   +   S E+ ARK M  
Sbjct: 184 MIGQHYEDSHLAAGFGNHMARPLFREKHTDDMSEED-ARKLMED 226


>gi|219114965|ref|XP_002178278.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410013|gb|EEC49943.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 250

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 48/172 (27%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ V+    VV+A + +            RK+  +    ++A FAG +ADA  L+ 
Sbjct: 28  RGSTVVGVQGKDCVVLAVEKRAIAKLQ-DSRTIRKIVSIDDHTVLA-FAGLTADARVLIN 85

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA----------DKTI 117
            +  + + Y   +  S      +  LAK  +       +    +            +   
Sbjct: 86  HVRLEAQSYRLSMEDSPSVDYTARYLAKIQQSYTQQGGVRPFGISTLITGIGADPQNPDK 145

Query: 118 TLVITGMGDVLEPENGV-MAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             +               +  G                        R A+  
Sbjct: 146 PFLYQTDPAGTHSRWKAQVIGGRNAKSLREFLEKSYQPDMDETASVRLAIQA 197


>gi|115486269|ref|NP_001068278.1| Os11g0615700 [Oryza sativa Japonica Group]
 gi|12229920|sp|Q9LSU1|PSA5_ORYSJ RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
           proteasome alpha subunit E; AltName: Full=20S proteasome
           subunit alpha-5
 gi|8671498|dbj|BAA96832.1| alpha 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|77551899|gb|ABA94696.1| Proteasome subunit alpha type 5, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113645500|dbj|BAF28641.1| Os11g0615700 [Oryza sativa Japonica Group]
 gi|215737179|dbj|BAG96108.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765321|dbj|BAG87018.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186097|gb|EEC68524.1| hypothetical protein OsI_36813 [Oryza sativa Indica Group]
 gi|222616332|gb|EEE52464.1| hypothetical protein OsJ_34630 [Oryza sativa Japonica Group]
          Length = 237

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKDGVVLAVEKRVTS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   + + +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|294861444|gb|ADF45319.1| proteasome subunit beta type 7 [Trematomus bernacchii]
          Length = 153

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 86  LLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPENGVMAIGS 139
             R       +  + + L   +  I  A      D     + +        +   + +GS
Sbjct: 3   TGRVPRVATANRMLKQMLFRYQGHIGAALVLGGVDCNGPHLYSIYPHGSTDKLPYVTMGS 62

Query: 140 GGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLETLKVGD 189
           G   A++              A+ + R A  IAA I   + +  NI L  +  G+
Sbjct: 63  GSLAAMAVFEDRYKPDMEEEDAKRLVRDA--IAAGIFNDLGSGSNIDLCVITKGN 115


>gi|50289565|ref|XP_447214.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526523|emb|CAG60147.1| unnamed protein product [Candida glabrata]
          Length = 194

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 12/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R    V++A    V+ G +V+K +  K R L     +  F G + D     E ++ 
Sbjct: 4   ILGIRVQDSVILATSKAVTRGISVLKDSDDKSRLLSPHT-LMTFTGEAGDTVQFAEYIQA 62

Query: 78  KLEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGD 126
            ++ Y  +        A                  Y  N+        K    +      
Sbjct: 63  NMQLYSIRENYELSPSAVSSYVRQELAKSIRSRKPYQVNVLIGGYDTKKEKPELYQIDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             + +    A G  G Y  S          +  E
Sbjct: 123 GTKVDLPYAAHGYSGFYTFSLLDHHYRPDMTTTE 156


>gi|47213154|emb|CAF93844.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 251

 Score = 65.4 bits (158), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 61/175 (34%), Gaps = 17/175 (9%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++    I+ G +G  AD 
Sbjct: 38  NPM-VTGTSVLGVKFSGGVIIAADMLGSYGSLARFRNISRLMKVNDSTIL-GASGDYADY 95

Query: 69  FTLLERLE-KKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMG 125
             L   +E   +++       S    A    + +  Y R  +   L     I     G  
Sbjct: 96  QYLKRVIEQMVIDEELLGDGHSYSPKAVHSWLTRVMYNRRSKMNPLWNTVVIGGFYKGES 155

Query: 126 DVLEP-------ENGVMAIGSGGSYALSAARALM--STQNS---AEEIARKAMSI 168
            +          E   +A G G   A    R  +    + S   A ++  + + +
Sbjct: 156 FLGYVDKLGVAYEAPTVATGFGAYLAQPLMREAVENKPELSKQEARDLIERCLKV 210


>gi|20090630|ref|NP_616705.1| proteasome subunit alpha [Methanosarcina acetivorans C2A]
 gi|23821985|sp|Q8TPX5|PSA_METAC RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|19915673|gb|AAM05185.1| multicatalytic endopeptidase complex, subunit alpha [Methanosarcina
           acetivorans C2A]
          Length = 247

 Score = 65.0 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 54/171 (31%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+  D +++  + V   +  K+ ++ +    A     +     +  
Sbjct: 32  RGTTAVGIKAADGVVLLVDKRITS-RLVEAESIEKIFQIDEHIGAATSGLVADARSLVDR 90

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++ +           ++K     K                +I   D     +   
Sbjct: 91  ARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFET 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                  E    AIG+G +  +    A      +   A  +   A+  AA+
Sbjct: 151 DPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKAAE 201


>gi|326428325|gb|EGD73895.1| proteasome subunit alpha type-5 [Salpingoeca sp. ATCC 50818]
          Length = 263

 Score = 65.0 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 27/200 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + ++ +  V+IA + +V+    +   +  K+  +      A  +G +ADA TL+ER
Sbjct: 34  GATAIGIQTNEGVIIAVEKRVTS-PLMEPESVPKIFEIDAHLACA-MSGLNADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK---------------YLRNLEAMILIADKT--- 116
              + + Y           +    +                   R     +L A      
Sbjct: 92  ARVEAQNYWFTYNEPMSVESVTQSVCNLAMQFGEGSDRESGSMSRPFGVALLFAGIDKEG 151

Query: 117 ---ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
                 +               AIGSG   A +A +       S   AE++A + +    
Sbjct: 152 SSIKPQLFHADPSGTFVSYLAKAIGSGSEGAQTALQDAYDKAMSLADAEKLALQTLKQVM 211

Query: 171 DICVYTNHNIVLETLKVGDE 190
           +  + T  NI + T+KV +E
Sbjct: 212 EEQI-TAKNIEVATVKVNEE 230


>gi|24644201|ref|NP_649529.1| proteasome beta7 subunit, isoform A [Drosophila melanogaster]
 gi|24644203|ref|NP_730922.1| proteasome beta7 subunit, isoform B [Drosophila melanogaster]
 gi|17380269|sp|Q9VNA5|PSB4_DROME RecName: Full=Proteasome subunit beta type-4; AltName:
           Full=Proteasome subunit beta type-7
 gi|7296763|gb|AAF52041.1| proteasome beta7 subunit, isoform A [Drosophila melanogaster]
 gi|21430236|gb|AAM50796.1| LD24633p [Drosophila melanogaster]
 gi|23170445|gb|AAN13277.1| proteasome beta7 subunit, isoform B [Drosophila melanogaster]
 gi|220943926|gb|ACL84506.1| Prosbeta4-PA [synthetic construct]
 gi|220953802|gb|ACL89444.1| Prosbeta4-PA [synthetic construct]
          Length = 268

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 17/167 (10%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L +R D  V++A D  VS G      N  +V ++ K  ++ G +G  AD  ++   +++
Sbjct: 60  VLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGG-SGDFADIQSIKRNIDQ 118

Query: 78  KLEQYP---NQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGD 126
           K+ +     + +      LA       Y R      L  D        +    +      
Sbjct: 119 KMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLR 178

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
               E+ V+A G     A+   R             A E+ R  M +
Sbjct: 179 GRSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEV 225


>gi|224107999|ref|XP_002314682.1| predicted protein [Populus trichocarpa]
 gi|118489001|gb|ABK96308.1| unknown [Populus trichocarpa x Populus deltoides]
 gi|222863722|gb|EEF00853.1| predicted protein [Populus trichocarpa]
          Length = 209

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 50/155 (32%), Gaps = 10/155 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  DG V++A D        V K N  K+ +L    ++A  +G S D     E ++K
Sbjct: 4   VFGLVGDGFVIVASDTSAVNSILVHKTNEDKIMKLDSHKLVAA-SGESGDRVQFTEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K    +  ++   DK     +        
Sbjct: 63  NVALYQFRNGIPLTTAAAANFTRGELATALRKNPYMVNILLAGYDKETGPSLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
             +    A G G  + LS       +  S EE   
Sbjct: 123 LHKVDRGAFGYGSYFCLSMMDRHYHSGMSVEEAVE 157


>gi|52549118|gb|AAU82967.1| multicatalytic endopeptidase complex subunit alpha [uncultured
           archaeon GZfos24D9]
          Length = 245

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 16/178 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    V +  D +++  + +   +  K+ RL      A     +     +  
Sbjct: 32  RGTTAVGIKAQDGVALLVDKRLTS-RLLEGGSVEKIFRLDTHIGAATSGLVADARMLIDR 90

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ +       +   LAK     K        LR     +LI         +   
Sbjct: 91  GRVESQINKVVYDEPIAVETLAKKICDYKQAFTQYGGLRPFGTALLIGGVYNGDKFLFET 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS--IAADICVYT 176
                  E    AIGSG S                E+   +  +A+       I + T
Sbjct: 151 DPSGALLEYKATAIGSGRSIVTELLEQQYKEDIKLEDAILLGLEALYKVTEGKIDITT 208


>gi|323309277|gb|EGA62498.1| Pre4p [Saccharomyces cerevisiae FostersO]
          Length = 294

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 67/208 (32%), Gaps = 25/208 (12%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +    + +  T++++++ D  V+IA D   S G  +      ++  +G   ++ G +G
Sbjct: 31  MVNTQQPI-VTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVV-GISG 88

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKT 116
             +D   +   LE  + +       +          + +      Y R  +   L     
Sbjct: 89  DISDMQHIERLLEDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAII 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN------------SAEEIARK 164
           +  V +     L   N +    S  + A      + +               +  ++A +
Sbjct: 149 VAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEE 208

Query: 165 AMSIAA----DICVYTNHNIVLETLKVG 188
           A+  A          ++ N  L  +   
Sbjct: 209 AIVNAMRVLYYRDARSSRNFSLAIIDKN 236


>gi|307198388|gb|EFN79330.1| Proteasome subunit beta type-2 [Harpegnathos saltator]
          Length = 207

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +    VMK++  K+ ++    ++A  +G S D     E + K 
Sbjct: 5   IGIQCKDFVLVAADMTTTQSIIVMKSDEHKIHKISDKLVMAT-SGESGDTTQFSEYIGKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIA------DKTITLVITGMGDVL 128
           ++ Y  +        A      +    YLR+     +        D     +        
Sbjct: 64  IQLYKMRNGYELSPKAAACFTRRNLADYLRSRTPYFVNMLMAGYDDDAGPELYFIDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +      G GG +++S          + +E
Sbjct: 124 CVKVPYATHGYGGMFSMSVLDRYYKHDCTEQE 155


>gi|154337338|ref|XP_001564902.1| proteasome alpha 2 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061940|emb|CAM38981.1| putative proteasome alpha 2 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 231

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L V+     VIA   + S    V  ++ +KV  L +      ++G   D   L++
Sbjct: 29  KGSTALGVKATDGAVIAAKKKASS-TLVDASSIQKVFVLDEHAG-CTYSGMGPDCRVLID 86

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
              +  +QY           QL+R    L +++     +R     +L+A  D     +  
Sbjct: 87  SARQNCQQYRLMYKEPIPISQLVRKISALYQEFTQSGGVRPFGCSLLVAGVDANGYHLYQ 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG+G S A +      +     E+    A+
Sbjct: 147 VDPSGTFWTWKATAIGTGSSDAKAFLEKRYTVDMELEDAVHTAL 190


>gi|254567185|ref|XP_002490703.1| Beta 7 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|238030499|emb|CAY68423.1| Beta 7 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|328351088|emb|CCA37488.1| 20S proteasome subunit beta 7 [Pichia pastoris CBS 7435]
          Length = 265

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 26/196 (13%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T+++ V+    +V+A D   S G     ++  ++  +G  + I G +G 
Sbjct: 34  MNTQQPI-VTGTSVIAVKYQDGIVLAADNLGSYGSLARFSDIERLLPVGD-STIVGISGD 91

Query: 65  SADAFTLLERL-EKKLEQYPNQLLRSSVELAKD--------WRMDKYLRNLEAMILIADK 115
            +D   +   L + +++   +    +                R  K      + I+    
Sbjct: 92  ISDLQQIERILDDLQVQDSYDMEKPNLKPEHVHEYLSRVFYNRRSKMDPLWNSTIVAGLS 151

Query: 116 TITLVI--TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEIARKA 165
           +   ++        +   +  +A G G   A+   R  + T+          A E+ R  
Sbjct: 152 STNELVLKYADLLGVTYSSPAIATGFGAHLAIPLLRRKVETEEDASKLTEEEAVELVRNC 211

Query: 166 MSI-----AADICVYT 176
           M +     A  I  Y+
Sbjct: 212 MKVLFYRDARSIDKYS 227


>gi|323305090|gb|EGA58841.1| Pre4p [Saccharomyces cerevisiae FostersB]
          Length = 266

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 67/208 (32%), Gaps = 25/208 (12%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +    + +  T++++++ D  V+IA D   S G  +      ++  +G   ++ G +G
Sbjct: 31  MVNTQQPI-VTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVV-GISG 88

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKT 116
             +D   +   LE  + +       +          + +      Y R  +   L     
Sbjct: 89  DISDMQHIERLLEDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAII 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN------------SAEEIARK 164
           +  V +     L   N +    S  + A      + +               +  ++A +
Sbjct: 149 VAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLXKVVDRESDIPKTTVQVAEE 208

Query: 165 AMSIAA----DICVYTNHNIVLETLKVG 188
           A+  A          ++ N  L  +   
Sbjct: 209 AIVNAMRVLYYRDARSSRNFSLAIIDKN 236


>gi|68075625|ref|XP_679732.1| proteasome subunit alpha type 5 [Plasmodium berghei strain ANKA]
 gi|56500546|emb|CAH94596.1| proteasome subunit alpha type 5, putative [Plasmodium berghei]
          Length = 252

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 24/197 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  +  V++A + ++     + K +  K+  +      A  +G  ADA TL++ 
Sbjct: 30  GSTAIGICVNDGVILASERRI-ASPLIEKDSVEKLLPIDDHIGCA-MSGLMADARTLIDH 87

Query: 75  LEKKLEQYPNQLLRSS----------------VELAKDWRMDKYLRNLEAMILIA--DKT 116
              +   Y      +                   L+   R     R     +LI   DK 
Sbjct: 88  ARVECNHYKFIYNENINIKSCVELISELALDFSNLSDSKRKKIMSRPFGVALLIGGVDKN 147

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +               +IGS    A    +   +   S EE   +A   +    +  
Sbjct: 148 GPCLWYTEPSGTNTRFLAASIGSAQEGAELLLQENYNKNMSFEEAEILALTVLRQVME-D 206

Query: 174 VYTNHNIVLETLKVGDE 190
             ++ N+ + ++K  D+
Sbjct: 207 KLSSSNVEIASIKKSDQ 223


>gi|226530826|ref|NP_001148604.1| proteasome subunit alpha type 5 [Zea mays]
 gi|195620714|gb|ACG32187.1| proteasome subunit alpha type 5 [Zea mays]
          Length = 237

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKDGVVLAVEKRVTS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESSTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   + +     AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELALEEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|114050993|ref|NP_001040146.1| proteasome zeta subunit [Bombyx mori]
 gi|87248207|gb|ABD36156.1| proteasome zeta subunit [Bombyx mori]
          Length = 243

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 57/171 (33%), Gaps = 19/171 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++   T+M+    +       +I    +G  AD+ TL+ER
Sbjct: 34  GSTAIGICTSEGVVLAVEKRIT--STLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK-----------------YLRNLEAMILIADKTI 117
              + + +           +    +                       +  M    D+  
Sbjct: 92  ARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             +          +    AIGSG   A  + + +     + +E  + A++I
Sbjct: 152 PQLFHMDPSGTFVQYDAKAIGSGSEGAQQSLKEIYHKSMTLKEAIKSALTI 202


>gi|325959908|ref|YP_004291374.1| proteasome subunit alpha [Methanobacterium sp. AL-21]
 gi|325331340|gb|ADZ10402.1| Proteasome subunit alpha [Methanobacterium sp. AL-21]
          Length = 249

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT L V+    +V+  D + +  + V   +  K+ ++      A     +     + +
Sbjct: 34  RGTTSLGVKSVEGIVLVVDKRPTS-KLVEPKSIEKIFQIDDHIGAATSGLVADARALVEK 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM---------ILIADKTITLVITG 123
            R+E ++ +           LAK     K +               I   +++   +   
Sbjct: 93  ARMESQINKITYNEPIRVDGLAKKICDMKQMYTQHGGVRPFGSALIIGGVNESGCKLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNI 180
                  E    AIG+G   A+       S     + A E+A  A+  A +    T  ++
Sbjct: 153 DPSGALIEYKATAIGAGRQIAMDEFEKKYSEDIKLDEAIELALDAVYEATE-GKTTVESV 211

Query: 181 VLETLKVGDE 190
            +  +   D+
Sbjct: 212 EIAIIDAKDK 221


>gi|18921038|gb|AAL82481.1| proteasome subunit LMP10 [Bos taurus]
          Length = 216

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 12/165 (7%)

Query: 33  GQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVE 92
            + +    V      K+  +       G AG +ADA          +E +     R    
Sbjct: 1   TRATNDSVVADKICEKMHFIAPKIYCCG-AGVAADAEMTTRMAASNMELHALSTGRECRV 59

Query: 93  LAKDWRMDKYLRNLEAMILI------ADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
                 + + L   +  +         D T   + +             A+GSG   A++
Sbjct: 60  ATVTRMLRQTLFRYQGYVGASLIVGGVDFTGPQLYSVHPHGSYSRLPFTALGSGQDAAIA 119

Query: 147 AARALMSTQNSAEEIARKAMSIA--ADI--CVYTNHNIVLETLKV 187
                      A E A++ +  A  A I   + +  N+    +  
Sbjct: 120 VLEDRFQPNI-ALEAAQELLVEAITAGILGDLGSGGNVDACVITA 163


>gi|222709117|gb|ACM67306.1| proteasome subunit alpha type 5 [Schistosoma japonicum]
          Length = 248

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++ +  VV+A + +V+    ++ ++  K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTGIGIKTNEGVVMAVEKRVNS-TLIIPSSIEKIFEVDKHIACA-VSGLVADARTLIER 91

Query: 75  LEKKLEQYP---------NQLLRSSVELAKDWRMDKY-------LRNLEAMILIADKTIT 118
              +   +            + ++   LA     D            +  +    D+   
Sbjct: 92  ARTEAAHHWFVYNEKMAIEDVTKAVSNLALALGDDDMESGAMSRPFGVALLFAGVDERGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A  A + +     +  E  + A+SI
Sbjct: 152 QLYHMDPSGTYIRYEAKAIGSGSEGAQQALQEIYHKNMTLHEGCKHALSI 201


>gi|148702198|gb|EDL34145.1| mCG7455 [Mus musculus]
          Length = 144

 Score = 64.6 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 10/115 (8%)

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-------KTITLVITGMGDVLEP 130
           +   Y  +        A    +   +   + M L  D       K    +     +    
Sbjct: 1   QCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMDTMICGWDKRGPGLYYVDSEGNRI 60

Query: 131 ENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVL 182
                A+GSG  YA        S       A ++A +A+  A     Y+   + L
Sbjct: 61  SGTAFAVGSGFVYAYGVMDRGYSYDLKVEEAYDLACQAIYQATYRDAYSGGAVNL 115


>gi|195382805|ref|XP_002050119.1| GJ20367 [Drosophila virilis]
 gi|194144916|gb|EDW61312.1| GJ20367 [Drosophila virilis]
          Length = 245

 Score = 64.6 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 28/189 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  +  VV+A + +++    ++     K+ ++ +    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTNDSVVLAVEKRITS-PMMVPKTVEKIVKVDEHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----------------DKYLRNLEAMILIADKTI- 117
              + + +      +    +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNEAMTVESCAQAVATLAIQFGDSGDSDGASAMSRPFGVAILFAGIENG 151

Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
              +          ++   AIGSG   A    +   + + S        +  A D+C+ T
Sbjct: 152 KPQLWHMDPSGTYIKHCAKAIGSGSEGAQQNLQEKYTPEMS--------LKDAIDLCLNT 203

Query: 177 NHNIVLETL 185
             +++ E L
Sbjct: 204 LKHVMEEKL 212


>gi|326429338|gb|EGD74908.1| proteasome subunit beta type [Salpingoeca sp. ATCC 50818]
          Length = 246

 Score = 64.6 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 15/189 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT--LL 72
            T++L ++ DG V IA D   S G         ++ ++G   ++ G    +       LL
Sbjct: 34  GTSVLGIKFDGGVAIAADTLGSYGSLARFREISRMCKVGNQTVVGGGGDVADFHMIRDLL 93

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMG 125
             LE +  +Y ++       +        Y R  +   L               +     
Sbjct: 94  NTLEIENREYEDEHDIKPQAVHTYLTRVLYNRRSQMNPLWNTVLVAGMQDGEPYLGYTDK 153

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADICVYTNHN 179
             +  +   +A G G   AL      ++      T+++A  + +K + +       + + 
Sbjct: 154 LGVAYQESTLACGYGAYIALGPLLREVADKGEPITKDAAVALLQKCLKVLWYRDARSLNR 213

Query: 180 IVLETLKVG 188
             + T+   
Sbjct: 214 FEIATVTAE 222


>gi|194381710|dbj|BAG64224.1| unnamed protein product [Homo sapiens]
          Length = 154

 Score = 64.2 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 40/147 (27%), Gaps = 39/147 (26%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G          +       ++A        ++   E 
Sbjct: 20  GTTIMAVEFDGGVVMGSDSRVSAG----------IELEEPPLVLAAANVVRNISYKYRED 69

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           L   L                             M+   D+     + G    +      
Sbjct: 70  LSAHL-----------------------------MVAGWDQREGGQVYGTLGGMLTRQPF 100

Query: 135 MAIGSGGSYALSAARALMSTQNSAEEI 161
              GSG ++      A      S EE 
Sbjct: 101 AIGGSGSTFIYGYVDAAYKPGMSPEEC 127


>gi|172087550|ref|XP_001913317.1| proteasome subunit alpha type 7 [Oikopleura dioica]
 gi|42601446|gb|AAS21469.1| proteasome subunit alpha type 7 [Oikopleura dioica]
 gi|313228744|emb|CBY17895.1| unnamed protein product [Oikopleura dioica]
          Length = 257

 Score = 64.2 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + VR D VVV+  + + +          RK+  +     +A FAG +ADA  +++
Sbjct: 29  KGATAVAVRGDNVVVLGVEKKATQKLQ-EDRTVRKICSIDNHIALA-FAGLTADARVMID 86

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTIT----LV 120
           R   + +Q+   +          RS   L + +      R      LI           +
Sbjct: 87  RARTECQQHRLTVEDAVTVEYITRSLANLKQKYTQSNGRRPFGLSSLIVGFDPHTNAAKL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS----TQNSAEEIARKAM 166
            T        E    AIG              +     +N A ++  +A+
Sbjct: 147 FTTDPSGTYSEWKANAIGRSSKTVREFLEKNYNEEGVPENDALKLVCQAL 196


>gi|225703218|gb|ACO07455.1| Proteasome subunit beta type 9 precursor [Oncorhynchus mykiss]
          Length = 162

 Score = 64.2 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 9/122 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TTIL V  +G V+I  D + S+ G  V      K+ ++         AGS ADA  + +
Sbjct: 16  GTTILAVTFNGGVIIGSDSRASIGGYYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTK 74

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             + ++  +  Q+    +  A               L+A  + A         V T    
Sbjct: 75  AAKFQISFHSIQMESPPLVKATASVLRELCYNNKEELQAGFITAGWDRKKGPQVYTVGPG 134

Query: 127 VL 128
             
Sbjct: 135 RY 136


>gi|224119566|ref|XP_002331192.1| predicted protein [Populus trichocarpa]
 gi|222873313|gb|EEF10444.1| predicted protein [Populus trichocarpa]
          Length = 237

 Score = 64.2 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  KV  +      A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKVMEIDDHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDEHGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S  +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSTLQEQYNKDLTLKEAEAIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|146099910|ref|XP_001468785.1| proteasome beta 7 subunit [Leishmania infantum]
          Length = 169

 Score = 64.2 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 11/150 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++ +G V++A D  +S G      N  +++ LG  + +    GS AD   + ++
Sbjct: 4   GGSVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCA-TGSYADFQMMTKQ 62

Query: 75  LE---KKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVITGM 124
           +E   ++   Y N    S  E+        Y +         + + +    + T +    
Sbjct: 63  VEDNIERQRMYHNVDELSPSEVFSYLHRSIYQKRCDFEPCLCQMVFIGFRDSETFLAGVD 122

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMST 154
                 E+  +A G G   AL   R  +  
Sbjct: 123 DVGTRWEDDCVATGYGAYIALPLLRQALEK 152


>gi|37779068|gb|AAP20194.1| proteasome subunit [Pagrus major]
          Length = 140

 Score = 64.2 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 4/125 (3%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ +R    V +A D +  +   ++  + +KV  +G+   I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMRGKNCVAVAADRRFGIQAQMVTTDFQKVFPMGERLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+ +RL+ +L  Y  +  R          +   L               ++        
Sbjct: 61  QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYI---EPVIAGLDPKTF 117

Query: 129 EPENG 133
           EP   
Sbjct: 118 EPFIC 122


>gi|226471390|emb|CAX70776.1| proteasome (prosome, macropain) subunit, beta type, 7
          [Schistosoma japonicum]
          Length = 87

 Score = 64.2 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 22/49 (44%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           TTI  V     +V+  D + + G  V + N  K+ R+    ++ G  G
Sbjct: 38 GTTICGVVFKNGIVLGADTRATEGNIVAEKNCSKIHRIADNMLLWGRDG 86


>gi|167382385|ref|XP_001736078.1| proteasome subunit beta type-4 precursor [Entamoeba dispar SAW760]
 gi|167388725|ref|XP_001738673.1| proteasome subunit beta type-4 precursor [Entamoeba dispar SAW760]
 gi|165897983|gb|EDR24993.1| proteasome subunit beta type-4 precursor, putative [Entamoeba
           dispar SAW760]
 gi|165901613|gb|EDR27689.1| proteasome subunit beta type-4 precursor, putative [Entamoeba
           dispar SAW760]
          Length = 225

 Score = 64.2 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 16/169 (9%)

Query: 15  AT-TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            T +++ ++ D  ++IA D   S G   +  +  ++ +LGK  +I G +G  +D   L E
Sbjct: 18  GTASVIGIKYDNGILIAADTLGSYGSMALFKDLERIIKLGKYTLIGG-SGEYSDFIELNE 76

Query: 74  RLEKKLEQYP----NQLLRSSVELAKDWRMDKYLRNLEAMILIAD-------KTITLVIT 122
            L+KK+         +      EL    +   Y    +   L          K    +  
Sbjct: 77  TLQKKVNGDECCEGKENGFKPSELYSYAQRILYEHRCDQKPLFVTLIVGGVKKDEIFLGQ 136

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
                       +A G G   A+   R       S   AE +  + M I
Sbjct: 137 TDMYGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIERCMKI 185


>gi|29841012|gb|AAP06025.1| similar to NM_011967 proteasome (prosome, macropain) subunit, alpha
           type 5 in Mus musculus [Schistosoma japonicum]
 gi|226471102|emb|CAX70632.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
 gi|226471104|emb|CAX70633.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
 gi|226487864|emb|CAX75597.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
 gi|226487866|emb|CAX75598.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
          Length = 248

 Score = 64.2 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++ +  VV+A + +V+    ++ ++  K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTGIGIKTNEGVVMAVEKRVNS-TLIIPSSIEKIFEVDKHIACA-VSGLVADARTLIER 91

Query: 75  LEKKLEQYP---------NQLLRSSVELAKDWRMDKY-------LRNLEAMILIADKTIT 118
              +   +            + ++   LA  +  D            +  +    D+   
Sbjct: 92  ARTEAAHHWFVYNEKMAIEDVTKAVSNLALAFGDDDMESGAMSRPFGVALLFAGVDERGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A  A + +     +  E  + A+SI
Sbjct: 152 QLYHMDPSGTYIRYEAKAIGSGSEGAQQALQEIYHKNMTLHEGCKHALSI 201


>gi|322491675|emb|CBZ26948.1| putative proteasome alpha 2 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 231

 Score = 64.2 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L V+    VVIA   +      V  ++ +KV  L +  +   ++G   D   L++
Sbjct: 29  KGSTALGVKATDGVVIAAKKKAPS-TLVDASSIQKVFVLDEH-VGCTYSGMGPDCRVLID 86

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
              K  +QY           QL+R    L +++     +R     +L+A  D     +  
Sbjct: 87  AARKYCQQYRLMYSEPIPISQLVRKISALYQEFTQSGGVRPFGCSLLVAGVDANGYHLYQ 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG+G   A +      +     E+    A+
Sbjct: 147 VDPSGTFWAWKATAIGTGSPDAKAFLEKRYTVDMELEDAVHTAL 190


>gi|124512076|ref|XP_001349171.1| proteasome subunit alpha type 5, putative [Plasmodium falciparum
           3D7]
 gi|23498939|emb|CAD51017.1| proteasome subunit alpha type 5, putative [Plasmodium falciparum
           3D7]
          Length = 256

 Score = 64.2 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 24/197 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  +  V++A + ++S    + K +  K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAVGICVNDGVILASERRISS-TLIEKDSVEKLLSIDDHIGCA-MSGLMADARTLIDY 91

Query: 75  LEKKLEQYPNQLLRSS----------------VELAKDWRMDKYLRNLEAMILIA--DKT 116
              +   Y      +                   L+   R     R     +LI   DK 
Sbjct: 92  ARVECNHYKFIYNENINIKSCVELISELALDFSNLSDSKRKKIMSRPFGVALLIGGVDKN 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +               +IGS    A    +       +   AE +A   +    +  
Sbjct: 152 GPCLWYTEPSGTNTRFSAASIGSAQEGAELLLQENYKKDMTFEQAEILALTVLRQVME-D 210

Query: 174 VYTNHNIVLETLKVGDE 190
             +  N+ +  +K  D+
Sbjct: 211 KLSTSNVEICAIKKSDQ 227


>gi|50307191|ref|XP_453574.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642708|emb|CAH00670.1| KLLA0D11506p [Kluyveromyces lactis]
          Length = 265

 Score = 64.2 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 71/186 (38%), Gaps = 20/186 (10%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T++++++ +  V++A D   + G  +   N  ++ ++G   ++ G +G 
Sbjct: 32  MNTQNPI-ITGTSVISIKYNNGVIVAADNLGAYGSLLRFTNEERLIKVGPNTVV-GVSGD 89

Query: 65  SADAFTLLERL-EKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIA---- 113
            +D   +   L E ++E         N+       + +      Y R  +   L      
Sbjct: 90  ISDMQYIQHLLDEMEIENNYDSAYADNEEQLKPSFVFEYLSSVMYQRRSKLDPLWNAIIV 149

Query: 114 ---DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE----EIARKAM 166
              +     +       +   +  +A G G   AL   R L+ T+   E    ++A+KA+
Sbjct: 150 GGTEDGKPFLRYVNLLGVTYSSPTLATGFGAHLALPLLRKLVDTEKDVEKVNLDVAKKAI 209

Query: 167 SIAADI 172
             A  I
Sbjct: 210 LEAMKI 215


>gi|291243435|ref|XP_002741602.1| PREDICTED: proteasome alpha 5 subunit-like [Saccoglossus
           kowalevskii]
          Length = 241

 Score = 64.2 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 59/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VVIA + +++    +   +  K+  +      A  +G  AD+  ++++
Sbjct: 34  GSTAIGIKTSEGVVIAVEKRITS-SLMEPTSIEKIVEVDTHIACA-MSGLIADSRIMVDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     +L    D  + 
Sbjct: 92  ARVEAQNHWFTYNEKMTVESVTQAVSNLALQFGDDDADVGAMSRPFGVALLFGGIDDKVP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          E    AIGSG   A SA + +     + +E ++ ++SI
Sbjct: 152 QLYHLDPSGTFIEYDAKAIGSGSEGAQSALQEVYHKSMTLKEASKSSLSI 201


>gi|226487862|emb|CAX75596.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
          Length = 248

 Score = 64.2 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++ +  VV+A + +V+    ++ ++  K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTGIGIKTNEGVVMAVEKRVNS-TLIIPSSIEKIFEVDKHIACA-VSGLVADAKTLIER 91

Query: 75  LEKKLEQYP---------NQLLRSSVELAKDWRMDKY-------LRNLEAMILIADKTIT 118
              +   +            + ++   LA  +  D            +  +    D+   
Sbjct: 92  ARTEAAHHWFVYNEKMAIEDVTKAVSNLALAFGDDDMESGAMSRPFGVALLFAGVDERGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A  A + +     +  E  + A+SI
Sbjct: 152 QLYHMDPSGTYIRYEAKAIGSGSEGAQQALQEIYHKNMTLHEGCKHALSI 201


>gi|115959733|ref|XP_001178807.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 2 [Strongylocentrotus purpuratus]
          Length = 201

 Score = 64.2 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 14/161 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L ++    V++A D        V K +  K+  L    ++   AG S D     E ++K 
Sbjct: 5   LGIQGPDYVLLASDMNAGRSVFVFKHDQEKMFPL-SSKLLMLCAGESGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L           +  ++   D+     +        
Sbjct: 64  IQLYKIRNGYELSPKAAANFTRKNLADFLRSKTPYQVNLLLAGHDETDGPCLFYMDYLGS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
             +    A G G  + LS          +   A E+ +K +
Sbjct: 124 LQQVPFAAHGYGSYFTLSILDRHYRRDMTRDQAVEVLKKCL 164


>gi|260788842|ref|XP_002589458.1| hypothetical protein BRAFLDRAFT_280892 [Branchiostoma floridae]
 gi|229274635|gb|EEN45469.1| hypothetical protein BRAFLDRAFT_280892 [Branchiostoma floridae]
          Length = 241

 Score = 64.2 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 62/170 (36%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    +V+A + +++    ++  +  K+  +      A  +G  AD+ T++++
Sbjct: 34  GSTAIGIQTSEGIVLAVEKRITS-PLMVSTSVEKIVEVDSHIGCA-VSGLVADSRTMIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + Y           +    +                  R     +L+A  D+   
Sbjct: 92  ARVEAQNYWFTYNEQMSVESVCQAVANLAIQFGEEDPDPGAMSRPFGVALLVAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A S+ + +     + +E  + A++I
Sbjct: 152 QLFHMDPSGTYVQYDAKAIGSGSEGAQSSLQEVYHKSMTLKEALKSALTI 201


>gi|156541240|ref|XP_001600736.1| PREDICTED: similar to proteasome beta 2 subunit-like protein
           [Nasonia vitripennis]
          Length = 207

 Score = 64.2 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 11/152 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +    VMK++  K+ ++ K  ++A  +G S DA    E + K 
Sbjct: 5   IGIQFKDFVLVAADMTNATSIMVMKSDEHKIHQVSKKLVMA-VSGESGDATQFSEYISKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIA------DKTITLVITGMGDVL 128
           L+ Y  +        A      +    YLR+     +        D T   +        
Sbjct: 64  LQLYKMRNGYELSPKAAANFTRRNLADYLRSRTPYFVNMLMAGYDDHTGPELYFIDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +    A G GG ++L+          + EE
Sbjct: 124 CVKVPYAAHGYGGFFSLTILDRYHRDNLTEEE 155


>gi|145486963|ref|XP_001429487.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124396580|emb|CAK62089.1| unnamed protein product [Paramecium tetraurelia]
          Length = 236

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 14/167 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ +   G VV+  D   S G      N  K+ ++ K  I    +G  +D   ++  
Sbjct: 21  GGSVIALAYKGGVVVGADTLCSYGSMADFKNVEKIAQVSKNTIYV-SSGEFSDFQQVVRE 79

Query: 75  LEKKLE---QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG-------M 124
           L K      QY + +  S  +         Y R  +   L     I     G        
Sbjct: 80  LAKIDRSALQYDDGVHPSPRDYGNYLARLSYKRRCKINPLYLQNVIAGFHNGERYLGLVD 139

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSI 168
                 E+  +  G    +  +      +     + A+++ R+   +
Sbjct: 140 IYGTYLESNFVTTGFASYFCKAIISNYWNENCTLDQAKQVIRECFKV 186


>gi|147903930|ref|NP_001085540.1| proteasome (prosome, macropain) subunit, beta type, 2 [Xenopus
           laevis]
 gi|49119183|gb|AAH72908.1| MGC80364 protein [Xenopus laevis]
 gi|77748113|gb|AAI06263.1| MGC80364 protein [Xenopus laevis]
          Length = 199

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 61/184 (33%), Gaps = 16/184 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + ++ +  V++A D  V     + MK +  K+ ++ +  ++    G + D     E ++K
Sbjct: 5   IGIQGNDFVLVAADT-VCANSIIRMKQDVDKMFKMSEKILLLC-VGEAGDTVQFAEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDV 127
            ++ Y  +        A      + L          ++  ++   D+     +       
Sbjct: 63  NVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPSLYYMDYLA 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +    A G G    LS          +   A E+ +K ++      + +  +  +  
Sbjct: 123 ALAKTRFAAHGYGAYLTLSILDRYYKPDLTREEAVELLKKCIAELQKRFILSLPSFTVRV 182

Query: 185 LKVG 188
           +   
Sbjct: 183 IDKD 186


>gi|66519157|ref|XP_393468.2| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Apis
           mellifera]
          Length = 207

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 53/152 (34%), Gaps = 11/152 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +    VMK +  K+ ++    +I   +G S D     E + K 
Sbjct: 5   IGIQFKDFVLVAADMTTAQSIMVMKNDEEKIHKMSD-KLIMAVSGESGDTTQFSEYIGKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMIL------IADKTITLVITGMGDVL 128
           ++ Y  +        A      +    YLR+     +        D T   +        
Sbjct: 64  IQLYKMRNGYELSPKAAALFTRRNLADYLRSRTPYFVNLLMAGYDDNTGPELYFIDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +    + G GG ++LS         ++ EE
Sbjct: 124 CVKVPYASHGYGGFFSLSILDRYHKYDSTEEE 155


>gi|270056441|gb|ACZ59446.1| hypothetical protein [Pleurotus ostreatus]
          Length = 250

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 53/189 (28%), Gaps = 15/189 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII---AGFAGSSADAFTL 71
            T++L ++    +++A D   S G      + + +  +G   +I      +        L
Sbjct: 49  GTSVLAIKYKDGIMMAADNLASYGSLARVKDVQSLHPIGDCTVIRAGGDMSNFQYIQQML 108

Query: 72  LERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
            E + ++        L           +    R          +I       + +     
Sbjct: 109 DELVTEEFATQDGHTLGPVEIHEYMSHVMYARRSKINPLWNSLVIGGFKNGKSFLSYVDL 168

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADICVYTNHN 179
                    +A G G   A    R  +       T+  A +I   +M +       + + 
Sbjct: 169 LGTTYTASTIATGYGSMIAQPLLRKAVEGNETTLTEEEALKIIESSMRVLFYRDARSINK 228

Query: 180 IVLETLKVG 188
             + T+   
Sbjct: 229 FQVATITEK 237


>gi|55378524|ref|YP_136374.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
 gi|59798451|sp|Q5V1D4|PSA2_HALMA RecName: Full=Proteasome subunit alpha 2; AltName: Full=20S
           proteasome alpha subunit 2; AltName: Full=Proteasome
           core protein PsmA 2
 gi|55231249|gb|AAV46668.1| proteasome alpha subunit [Haloarcula marismortui ATCC 43049]
          Length = 244

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 63/191 (32%), Gaps = 17/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR +  VVIA D        + + +  K+  +     +A  AG  ADA  L++
Sbjct: 34  RGTASVGVRTEDGVVIAADRHA-RSPLIERDSIEKIHEIDSHVGVA-SAGHVADARQLID 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTI--TLVIT 122
              ++ +    +    +   +    +  Y+         R     +L+A        +  
Sbjct: 92  VARRQSQVNRLRYDEPASVESLTKEITDYIQQYTQTGGARPFGVALLVAGIEDGEPRLFE 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHN 179
                   E   +AIG       +      +     E   E+A +A++   +        
Sbjct: 152 TDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMDLEGGIELALRALASVNE-DGLDATG 210

Query: 180 IVLETLKVGDE 190
           + + T+ V  E
Sbjct: 211 VDIATIDVESE 221


>gi|167535742|ref|XP_001749544.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771936|gb|EDQ85595.1| predicted protein [Monosiga brevicollis MX1]
          Length = 224

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 10/163 (6%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--G 60
           +       + +  T++L ++ DG VVIA D   S G      + R++  +G   ++   G
Sbjct: 1   MAAPSRNPI-VTGTSVLAIKFDGGVVIAADTLGSYGSLARFRDIRRLVSVGNQTVVGASG 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD------ 114
                      L+ LE +  +Y ++       +        Y R      L         
Sbjct: 60  DVADFHSMKDTLDELEVENREYDDEHTIKPKAIFSFLTRVLYNRRSRMNPLWNSFVVAGV 119

Query: 115 -KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
                 + T     +      +A G G   AL   R  + + +
Sbjct: 120 QDGEPFLGTTDKVGVAFTEDTIATGYGAYIALPLLRNALESND 162


>gi|14318575|ref|NP_116708.1| Pre4p [Saccharomyces cerevisiae S288c]
 gi|266838|sp|P30657|PSB4_YEAST RecName: Full=Proteasome component PRE4; AltName: Full=Macropain
           subunit PRE4; AltName: Full=Multicatalytic endopeptidase
           complex subunit PRE4; AltName: Full=Proteinase YSCE
           subunit PRE4; Flags: Precursor
 gi|11514004|pdb|1G0U|M Chain M, A Gated Channel Into The Proteasome Core Particle
 gi|11514018|pdb|1G0U|1 Chain 1, A Gated Channel Into The Proteasome Core Particle
 gi|178847472|pdb|2ZCY|M Chain M, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847486|pdb|2ZCY|0 Chain 0, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847514|pdb|3BDM|M Chain M, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847528|pdb|3BDM|0 Chain 0, Yeast 20s Proteasome:glidobactin A-Complex
 gi|323462948|pdb|3NZJ|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462962|pdb|3NZJ|1 Chain 1, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462976|pdb|3NZW|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462990|pdb|3NZW|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323463004|pdb|3NZX|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463018|pdb|3NZX|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|4223|emb|CAA48629.1| proteasome Pre4 subunit [Saccharomyces cerevisiae]
 gi|836805|dbj|BAA09289.1| proteosome component PRE4 [Saccharomyces cerevisiae]
 gi|151940814|gb|EDN59201.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
 gi|190406625|gb|EDV09892.1| necessary for peptidyl glutamyl peptide hydrolyzing activity
           [Saccharomyces cerevisiae RM11-1a]
 gi|207345601|gb|EDZ72367.1| YFR050Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256268832|gb|EEU04186.1| Pre4p [Saccharomyces cerevisiae JAY291]
 gi|259146242|emb|CAY79501.1| Pre4p [Saccharomyces cerevisiae EC1118]
 gi|285811948|tpg|DAA12493.1| TPA: Pre4p [Saccharomyces cerevisiae S288c]
 gi|323333754|gb|EGA75146.1| Pre4p [Saccharomyces cerevisiae AWRI796]
 gi|323337806|gb|EGA79049.1| Pre4p [Saccharomyces cerevisiae Vin13]
 gi|323348807|gb|EGA83047.1| Pre4p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323355212|gb|EGA87039.1| Pre4p [Saccharomyces cerevisiae VL3]
 gi|742353|prf||2009376D proteasome:SUBUNIT=Pre4
          Length = 266

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 67/208 (32%), Gaps = 25/208 (12%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +    + +  T++++++ D  V+IA D   S G  +      ++  +G   ++ G +G
Sbjct: 31  MVNTQQPI-VTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVV-GISG 88

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKT 116
             +D   +   L+  + +       +          + +      Y R  +   L     
Sbjct: 89  DISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAII 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN------------SAEEIARK 164
           +  V +     L   N +    S  + A      + +               +  ++A +
Sbjct: 149 VAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEE 208

Query: 165 AMSIAA----DICVYTNHNIVLETLKVG 188
           A+  A          ++ N  L  +   
Sbjct: 209 AIVNAMRVLYYRDARSSRNFSLAIIDKN 236


>gi|195017517|ref|XP_001984612.1| GH16568 [Drosophila grimshawi]
 gi|193898094|gb|EDV96960.1| GH16568 [Drosophila grimshawi]
          Length = 213

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 52/175 (29%), Gaps = 13/175 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++L +R +  V+IA D  ++ G      N  ++ ++    ++ G    +     +   
Sbjct: 4   GSSVLGIRYNAGVLIAADTLITYGSMARYQNVDRIFKINNRILLGGSGDFADVQCIMRSI 63

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGD 126
            +K +E            LA       Y R L    L  D          +  +      
Sbjct: 64  DQKIIEDQYQNCSTKPNSLATWMTRVLYNRRLCENPLNIDVIIAGIDECGLPYLANVDMR 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSIAADICVYT 176
               E+ V+A      Y +                 A ++ R  M        ++
Sbjct: 124 GGIYEDYVLATCFANQYCVPLVCESKPRDRDFTFAEAIDLIRSCMQALYYRDTHS 178


>gi|291226741|ref|XP_002733349.1| PREDICTED: proteasome beta 9 subunit isoform 1 proprotein-like
           [Saccoglossus kowalevskii]
          Length = 230

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 65/184 (35%), Gaps = 11/184 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+    +  VVI GD + + G  +    + K+  +      A  +GS AD   L + 
Sbjct: 30  GTTIMATEFNDGVVIGGDTRTTSGTIITHKVSDKITEITDSIYCA-RSGSLADTQALADI 88

Query: 75  LEKKLEQ--YPNQLLRSSVELAKDWRMDKY--LRNLEAMILIADKT---ITLVITGMGDV 127
           ++  ++   Y          +AK ++   Y     ++A +++A         V +     
Sbjct: 89  IKYYMDMYRYYIDTNPMVSVVAKQFQSLSYTWRDKIQAGLIVAGWDSVNCGQVYSIPMGG 148

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLET 184
                 V   GSG SY      A    Q +  E       A+S+A      +   I L  
Sbjct: 149 ACVRQHVTISGSGSSYISGYIDAYYHNQMTKNECMNFTTNAISLAIARDGGSGGVIRLAV 208

Query: 185 LKVG 188
           +   
Sbjct: 209 ITKD 212


>gi|3914413|sp|P90513|PSA3_ACACA RecName: Full=Proteasome subunit alpha type-3
 gi|1809142|gb|AAB41645.1| multicatalytic endopeptidase subunit C8 [Acanthamoeba castellanii]
          Length = 252

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T L +R    VV+A +  +     V   N R++  + +   +A  +G  AD   L+ 
Sbjct: 31  NSGTALGLRVKDGVVLAVEKLLVSKMLVPNTN-RRIHTVDRHCGLA-MSGLVADGRQLVS 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----------ILIADKTITLVIT 122
           R   +   Y             + R+  +++                +   DK    +  
Sbjct: 89  RGRAEATSYREFYGTDISGKVLNERLSNFVQLYSLYGSVRPFGTSVILGCVDKNGPQLYM 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
                +      +AIG G   A +    L  ++ +A E    A+  AA I +Y+
Sbjct: 149 IEPSGISWGYFGVAIGKGARAAKTEIEKLKLSEMTARE----AIKEAAKI-IYS 197


>gi|52352382|gb|AAU43671.1| proteasome alpha subunit [uncultured archaeon GZfos26D8]
          Length = 263

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 16/180 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+  D +++  + +   +  K+ ++ +    A     +     +  
Sbjct: 34  RGTTAIGIKAQDGVVLLVDKRLTS-RLLEGGSVEKIFKIDEHIGAATSGLVADARILVDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ Q           LAK     K        LR     +LI         ++  
Sbjct: 93  GRVEAQINQIAYGETIDVRTLAKKICDFKQAYTQIGGLRPFGTALLIGGVYNGDCYLLET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD--ICVYTNH 178
                  E    AIGSG S          +       A  +  +A+ I  +  I V T  
Sbjct: 153 DPSGALLEYKATAIGSGRSVVTEMFEEKYNEDILLKDAILLGLEALYIVTEGKIDVTTID 212


>gi|307594924|ref|YP_003901241.1| proteasome endopeptidase complex subunit alpha [Vulcanisaeta
           distributa DSM 14429]
 gi|307550125|gb|ADN50190.1| proteasome endopeptidase complex, alpha subunit [Vulcanisaeta
           distributa DSM 14429]
          Length = 247

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 15/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
                + ++    VV+A + + VS    +  ++  KV  +     IA  +G  +DA  L+
Sbjct: 34  RGWATVGIKCVDGVVLAAEKRKVSA--LIDLSSIEKVYMIDDHVGIAA-SGLLSDARVLI 90

Query: 73  ERLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVI 121
           E   ++ + +            L +   +L +       +R   A +++   DK    + 
Sbjct: 91  EYARQEAQTHKLLYDEPIDVELLTKRISDLKQMHTQYGGVRPFGAALIVGGVDKHGPRLF 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +      +A+G+  S              + +E  + A+  
Sbjct: 151 QTDPGGIYFGFYAVAMGAESSRITEFLEKEYKYDMNLDECVKLAIRA 197


>gi|295314965|gb|ADF97632.1| proteasome subunit beta type-4 [Hypophthalmichthys molitrix]
          Length = 257

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 68/199 (34%), Gaps = 27/199 (13%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++     I G +G  AD 
Sbjct: 41  NPM-VTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKV-NNTTILGASGDYADY 98

Query: 69  FTLLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
             L + +E+ +   E   +    +   +        Y R  +   L     I     G  
Sbjct: 99  QYLKQIIEQMVIDEELLGDGHSYTPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGES 158

Query: 126 DVLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI----- 168
            +          E   +A G G   A    R ++      T++ A  +  + + +     
Sbjct: 159 FLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVLDNKVEITKDEARALIERCLKVLYYRD 218

Query: 169 AA-----DICVYTNHNIVL 182
           A      +I + T   + +
Sbjct: 219 ARSYNRHEIAIVTADGVEI 237


>gi|198426046|ref|XP_002119550.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
           type, 2 [Ciona intestinalis]
          Length = 200

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 43/162 (26%), Gaps = 13/162 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
            +  +    V+IA D   +    VM             + I    G S D+    E ++K
Sbjct: 4   TIGFKCHDFVLIAADT-AAARSIVMFKQDEDKMISLGKSTIMSVTGDSGDSNQFSEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRN---------LEAMILIADKTITLVITGMGDVL 128
            L+ Y  +               K L              M    D +   +        
Sbjct: 63  NLQLYKMRNGYEMSTKGMANFTRKTLAEALRKNPYNVNLLMAGCDDSSDCSLYFMDYLAS 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMS 167
             E    A G G  + LS          + +E     RK M 
Sbjct: 123 SVEVPFAAHGYGSYFVLSLLDRWHKPDLTRDEAVILLRKCME 164


>gi|224007805|ref|XP_002292862.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
           pseudonana CCMP1335]
 gi|220971724|gb|EED90058.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
           pseudonana CCMP1335]
          Length = 219

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 60/213 (28%), Gaps = 32/213 (15%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           K    +++   +  V     V+IA D +++ G   + +      +     ++ G AG ++
Sbjct: 1   KFDPYQLNGGLVAAVAGKDYVIIASDTRLTDGGYGINSRRNIQLQQTNLPVMIGSAGCAS 60

Query: 67  DAFTLLERLEKKLE-QYPNQLLRSSVELAKDWRMDKYLRNLEAMILI------------- 112
           D  +L  R+  +L+    N         +    + + L                      
Sbjct: 61  DCESLKRRVRLELDSLECNFPSGKMGVQSVANLLQQVLYGRRGFPFYSFCVVAGIDRDEQ 120

Query: 113 -ADKTITL--VITGMGDVLEPENGVMAIGSGGSYALSAARALMS---------------T 154
             D    +  V             V + G+G          + S               T
Sbjct: 121 TGDSKCGMGAVYVYDAIGSFERVAVGSAGTGRELLQPILDRMGSIKQNNNVIQDGLAQCT 180

Query: 155 QNSAEEIARKAMSIAADICVYTNHNIVLETLKV 187
              A     +A    A+  +     +V+  +K 
Sbjct: 181 WEEAVNNVARAYQSVAEREISVGDEVVICVVKA 213


>gi|52550475|gb|AAU84324.1| proteasome alpha subunit [uncultured archaeon GZfos9D1]
          Length = 261

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 58/180 (32%), Gaps = 16/180 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+  D +++  + +   +  K+ ++ +    A     +     +  
Sbjct: 34  RGTTAIGIKAQDGVVLLVDKRLTS-RLLEGGSVEKIFKIDEHIGAATSGLVADARVLVDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ Q           LAK     K        LR     +LI         ++  
Sbjct: 93  GRVEAQINQIAYGEAIDVRTLAKKICDFKQAYTQIGGLRPFGTALLIGGVYNGDCYLLET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD--ICVYTNH 178
                  E    AIGSG S          +       A  +  +A+ I  +  I + T  
Sbjct: 153 DPSGALLEYKATAIGSGRSVVTEMFEEKYNEDILLKDAILLGLEALYIVTEGKIDITTID 212


>gi|308808482|ref|XP_003081551.1| 20S proteasome, regulatory subunit alpha type PSMA3/PRE10 (ISS)
           [Ostreococcus tauri]
 gi|116060016|emb|CAL56075.1| 20S proteasome, regulatory subunit alpha type PSMA3/PRE10 (ISS)
           [Ostreococcus tauri]
          Length = 226

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + + +    +  ++  K+  +      A  +G +ADA+T++E 
Sbjct: 23  GSTAIAIKTKEGVVLAVEKRATS-PLMDSSSLEKIAEIDAHIGCA-VSGLTADAWTMVEH 80

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +          L+    +             +  R     +L+   D     +
Sbjct: 81  GRAECQNHYFTYNEPMPVLSCTSSLCDLAMSFAGEGEKRMSRPFGVALLVGGKDDDGYHL 140

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
           +         +    AIGSG   A +A +       +   AE +A K +    +
Sbjct: 141 VHTDPSGTAMQYKAKAIGSGSEGAQTALQEEYREDLTLKEAETLALKTLKAVME 194


>gi|62955575|ref|NP_001017801.1| proteasome subunit beta type-4 [Danio rerio]
 gi|62202262|gb|AAH92880.1| Proteasome (prosome, macropain) subunit, beta type, 4 [Danio rerio]
 gi|182888862|gb|AAI64311.1| Psmb4 protein [Danio rerio]
          Length = 215

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 14/188 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+  G V+IA D   S G      N  ++ ++    I+      +   +     
Sbjct: 4   GTSVLGVKFKGGVIIAADMLGSYGSLARFRNISRLMKVNNSTILGASGDYADYQYLKQII 63

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGDVLEP-- 130
            +  +++       S    A    + +  Y R  +   L     I     G   +     
Sbjct: 64  EQMVIDEELLGDGHSYTPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYVDK 123

Query: 131 -----ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICVYTNHNI 180
                E   +A G G   A    R ++      T+  A E+  + + +       + +  
Sbjct: 124 LGVAYEAPTVATGFGAYLAQPLMREVIENKEEITKEEARELIERCLKVLYYRDARSYNRH 183

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 184 EIAIVTAD 191


>gi|58332308|ref|NP_001011057.1| proteasome (prosome, macropain) subunit, beta type, 2 [Xenopus
           (Silurana) tropicalis]
 gi|54038181|gb|AAH84185.1| hypothetical LOC496467 [Xenopus (Silurana) tropicalis]
 gi|89266833|emb|CAJ83920.1| proteasome (prosome macropain) subunit beta type 2 [Xenopus
           (Silurana) tropicalis]
          Length = 199

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 61/184 (33%), Gaps = 16/184 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + ++ +  V++A D  V     + MK +  K+ ++ +  ++    G + D     E ++K
Sbjct: 5   IGIQGNDFVLVAADT-VCANSIIKMKHDVDKMFKMSEKILLLC-VGEAGDTVQFAEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDV 127
            ++ Y  +        A      + L          ++  ++   D+     +       
Sbjct: 63  NVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHDGPSLYYMDYLA 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +    A G G    LS          +   A E+ +K ++      + +  +  +  
Sbjct: 123 ALAKTRFAAHGYGAYLTLSILDRYYKPDLTREDAVELLKKCIAELQKRFILSLPSFTVRV 182

Query: 185 LKVG 188
           +   
Sbjct: 183 IDKD 186


>gi|324515585|gb|ADY46251.1| Proteasome subunit alpha type-5 [Ascaris suum]
          Length = 248

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 21/190 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +R +  VV+A + + +    V      K+ ++    +   FAG  AD+ TL+ER
Sbjct: 34  GSTSIGIRTNEGVVLAAEKRATSKLMV-NDAIEKISKVDSH-VAVTFAGLIADSRTLVER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK-------------YLRNLEAMILIA--DKTITL 119
            + + + +     R          +                 R     +L A  D+    
Sbjct: 92  AQIEAQNFWFTYNRKIRVEDVTMSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEGPK 151

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYT 176
           +          +    +IG+    A    +           AE+IA   +    +  + T
Sbjct: 152 LFHLDPSGTFIDCLAKSIGAASDGAEQNLKEQYHESTTLLEAEKIALSILKQVMEEKL-T 210

Query: 177 NHNIVLETLK 186
           + N+ + T+K
Sbjct: 211 SSNVEIVTIK 220


>gi|224141787|ref|XP_002324245.1| predicted protein [Populus trichocarpa]
 gi|222865679|gb|EEF02810.1| predicted protein [Populus trichocarpa]
          Length = 244

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 60/172 (34%), Gaps = 14/172 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ ++    +++A D   S G T+   +  +++ +GK + + G +G  +D   ++  
Sbjct: 29  GSSVVALKYKDGILMAADMGGSYGSTLRYKSVERIKPVGKHS-LIGASGEISDFQEIMRY 87

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTITLVITGM 124
           L+++ L         S         + + +              ++    K    +    
Sbjct: 88  LDEQVLNDNMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNTLLLGGVKKGQKFLGMVT 147

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +  E   +A G G   A    R+      + EE   +  K M +     
Sbjct: 148 MIGVNFEENHVATGFGNHMAQPILRSEWHENLTFEEGVALLEKCMRVLLYRD 199


>gi|72006085|ref|XP_782337.1| PREDICTED: similar to proteasome alpha 5 subunit
           [Strongylocentrotus purpuratus]
 gi|115950382|ref|XP_001177263.1| PREDICTED: similar to proteasome alpha 5 subunit
           [Strongylocentrotus purpuratus]
          Length = 241

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 60/168 (35%), Gaps = 18/168 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +R +  +V+A + +V+    +   +  K+  +      A  +G  AD+ T+++R
Sbjct: 34  GSTAIGIRTNEGIVLAVEKRVTS-PLMEATSIEKIVEIDSHIGCA-MSGLIADSRTMIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     +L A  D+   
Sbjct: 92  ARVEAQSHWFTYNEKMSVESVTQAVSNLALQFGDDEAGSGAMSRPFGVALLFAGIDQKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
           ++          +    AIGSG   A S  + +     + +E  ++++
Sbjct: 152 ILYHMDPSGTFLQFDAKAIGSGSEGAQSQLQEVFHKSLTLKEACKESL 199


>gi|307187742|gb|EFN72714.1| Proteasome subunit alpha type-5 [Camponotus floridanus]
          Length = 270

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    +      K+  + K    A  +G  AD+ T+++R
Sbjct: 34  GSTAIGIATTEGVVLAVEKRITS-TLMEPTTVEKIVEIDKHIGCAA-SGLMADSRTMIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     +L A  D+   
Sbjct: 92  ARVECQNHWFVYNERMTVESTAQAVSNLAIQFGDSDDDGTAMSRPFGVAMLFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A    + +     + +E  + A++I
Sbjct: 152 QLYHMDPSGTFVQFDAKAIGSGSEGAQQNLQEVYHKSMTLKEALKAALTI 201


>gi|255584432|ref|XP_002532947.1| proteasome subunit alpha type, putative [Ricinus communis]
 gi|223527276|gb|EEF29431.1| proteasome subunit alpha type, putative [Ricinus communis]
          Length = 237

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 20/185 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  KV  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKVMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM------------DKYLRNLEAMILIA--DKTITLV 120
              + + +           +    +            D   R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEDSMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +       AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDITLLEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVL 182
           +N+ +
Sbjct: 211 NNVDI 215


>gi|160331191|ref|XP_001712303.1| prsB3 [Hemiselmis andersenii]
 gi|159765750|gb|ABW97978.1| prsB3 [Hemiselmis andersenii]
          Length = 201

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 49/162 (30%), Gaps = 10/162 (6%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  +  +I+ +       IA D +  L          K+ ++ +   + G  G   D  T
Sbjct: 1   MDYNGGSIIIMGGKNCFAIASDLRFGLDNFTKGQKTPKIFKIHEKLFL-GMIGLFGDIST 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           + + LE K   Y  +       L     +   L +      + +  +  +       +E 
Sbjct: 60  IRQILEYKTSIYLLKKSERIQPLGFSNILSNLLYHHRFAPFLVETVLAGLDEKNRLFIES 119

Query: 131 EN---------GVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
           ++             IGS               + + E++ +
Sbjct: 120 KDILGAKSATSDFATIGSCSESLNGICGVFWKPEMNREDLFK 161


>gi|217071540|gb|ACJ84130.1| unknown [Medicago truncatula]
          Length = 237

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 65/185 (35%), Gaps = 20/185 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  +      A  +G   DA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDDHIGCA-MSGLITDARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVL 182
           +N+ +
Sbjct: 211 NNVDI 215


>gi|71023555|ref|XP_762007.1| hypothetical protein UM05860.1 [Ustilago maydis 521]
 gi|46101572|gb|EAK86805.1| hypothetical protein UM05860.1 [Ustilago maydis 521]
          Length = 266

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 57/191 (29%), Gaps = 17/191 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            T++L ++    +++A D   S G      +  ++ + G+  +I   G          +L
Sbjct: 48  GTSVLGIKYKDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGASGDMSDWQYVQHML 107

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---------KTITLVITG 123
            +L    +   +    +  ++        Y R  +   L                 +   
Sbjct: 108 NKLITSEDVAADGHNLTPTQIYAYLARVMYQRRSKINPLWNSFVLGGVDPKDGTPFLGYV 167

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADICVYTN 177
                   +  +A G G   A    R ++       T+  A+EI    M +       + 
Sbjct: 168 DLLGTTFTSSTIATGFGLHLAQPLLRKMVEGREDTLTEAEAKEILENCMKVLFYRDARSL 227

Query: 178 HNIVLETLKVG 188
           +   +  +   
Sbjct: 228 NRFRIAKVTRD 238


>gi|322800061|gb|EFZ21167.1| hypothetical protein SINV_05479 [Solenopsis invicta]
          Length = 254

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 43/164 (26%), Gaps = 9/164 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +  T++ +R    VV A +  V+       AN R        G  I+G    +       
Sbjct: 33  NGGTVIGLRGKDGVVFAVEKIVTSKLYEAGANKRIFNIDQHVGMAISGIISDARQIAETA 92

Query: 73  ERLEKKLEQYPN--------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
                  +                S    A              ++   +     +    
Sbjct: 93  RSEAASYKAQYGVGIPLKYLNERVSMYMHAYTLYSAVRPYGCSVLLSAYETDGPTLYMID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +       A+G     A +    L   + + +E+ ++A  I
Sbjct: 153 PSGVSYGYYGCAVGKAKQSAKTEIEKLKLPEMTCKELVKEAARI 196


>gi|197129687|gb|ACH46185.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
          Length = 271

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 19/177 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L ++  G V++A D   S G         ++ ++    ++ G +G  AD 
Sbjct: 53  SPM-VTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVL-GASGDLADF 110

Query: 69  FTLLERLE-KKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTIT 118
             L + LE   +++       S    A    + + L              +I       +
Sbjct: 111 QYLRQLLEQMVIDEELLGDGHSYSPRALHSWLTRVLYNRRSKINPLWNTVLIAGVYGGES 170

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------AEEIARKAMSI 168
            +       +  E   +A G G   A    RA +            A E+  + + +
Sbjct: 171 FLGYVDMLGVAYEAPSLATGFGAYLAQPLLRAELERDQDRLPTREEARELLERCLRV 227


>gi|255641541|gb|ACU21044.1| unknown [Glycine max]
          Length = 237

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNGKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|301629961|ref|XP_002944100.1| PREDICTED: proteasome subunit beta type-8-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 141

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 34/112 (30%), Gaps = 10/112 (8%)

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEA-------MILIADKTITLVITGMGDVLEPENG 133
            Y  +        A    +   +            MI   DK    +     +       
Sbjct: 1   LYQLRNNSRISVSAASKLLCNMMLQYRGSGLSMGSMICGWDKMGPGLYYVDDNGTRLSGD 60

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
           + + GSG SYA     +      +  E   + R+A+S AA    Y+   + +
Sbjct: 61  IFSTGSGNSYAYGVMDSGYRYDLTPVEAYDLGRRAVSYAAHRDNYSGGVVNM 112


>gi|116779303|gb|ABK21227.1| unknown [Picea sitchensis]
          Length = 250

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 48/167 (28%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A   + +     V++AG+ +++        +  K+ ++        AG    +      
Sbjct: 30  NAGAAVGILAKDGVILAGEKRITSKLLQTSKSTEKMYKVDDHVACAVAGIMADANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTFAYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLC 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                          IG+    A +  R       + EE A  A+ +
Sbjct: 149 MSDPSGNYGGWKAAGIGANNPVAQTMLRQEYKDDMTKEEAAELALKV 195


>gi|83285957|ref|XP_729951.1| proteasome subunit alpha type 5 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23489205|gb|EAA21516.1| proteasome subunit alpha type 5 [Plasmodium yoelii yoelii]
          Length = 256

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 24/197 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  +  V++A + ++     + K +  K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAIGICVNDGVILASERRI-ASPLIEKDSVEKLLPIDDHIGCA-MSGLMADARTLIDH 91

Query: 75  LEKKLEQYPNQLLRSS----------------VELAKDWRMDKYLRNLEAMILIA--DKT 116
              +   Y      +                   L+   R     R     +LI   DK 
Sbjct: 92  ARVECNHYKFIYNENINIKSCVELISELALDFSNLSDSKRKKIMSRPFGVALLIGGVDKN 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +               +IGS    A    +   +   S EE   +A   +    +  
Sbjct: 152 GPCLWYTEPSGTNTRFLAASIGSAQEGAELLLQENYNKNMSFEEAEILALTVLRQVME-D 210

Query: 174 VYTNHNIVLETLKVGDE 190
             ++ N+ +  +K  D+
Sbjct: 211 KLSSSNVEIAAIKKSDQ 227


>gi|91788532|ref|YP_549484.1| 20S proteasome subunits A/B [Polaromonas sp. JS666]
 gi|91697757|gb|ABE44586.1| 20S proteasome, A and B subunits [Polaromonas sp. JS666]
          Length = 197

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 70/195 (35%), Gaps = 24/195 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK------GNIIAGFAGSSADAF 69
           TT++ V+K G + IA D  V+ G T +        ++ K      G    G AG+ A   
Sbjct: 2   TTLVVVKKAGQIAIAADTLVTFGDTSLTHRFEANSKIFKVDAPVVGTSYIGMAGTVAHFP 61

Query: 70  TLLERLEKKLEQY----------------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
            L + +    ++                    L  +     K+   D Y  +   +++  
Sbjct: 62  ALRKAMSALAKEDLKLGSRDEVFDTFIKLHPLLKDTFFLQTKEDDNDPYESSQFTVVIAN 121

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
              I  + +     +        IGSG S+AL A  A      +A E+A   M+   +  
Sbjct: 122 ASGIYGLYS--YREVFEFKEFWGIGSGRSFALGAMHACWDKARTAREVALAGMNAGCEFD 179

Query: 174 VYTNHNIVLETLKVG 188
             +   I + TLK+ 
Sbjct: 180 KNSAGPIEVFTLKLK 194


>gi|15231824|ref|NP_188046.1| PAE2; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|18206373|sp|Q42134|PSA5B_ARATH RecName: Full=Proteasome subunit alpha type-5-B; AltName: Full=20S
           proteasome alpha subunit E-2; AltName: Full=Proteasome
           component Z
 gi|13877965|gb|AAK44060.1|AF370245_1 putative 20S proteasome subunit PAE2 [Arabidopsis thaliana]
 gi|3421090|gb|AAC32061.1| 20S proteasome subunit PAE2 [Arabidopsis thaliana]
 gi|9279577|dbj|BAB01035.1| 20S proteasome subunit PAE-like protein [Arabidopsis thaliana]
 gi|17065644|gb|AAL33816.1| putative 20S proteasome subunit PAE2 [Arabidopsis thaliana]
 gi|332641977|gb|AEE75498.1| proteasome subunit alpha type-5-B [Arabidopsis thaliana]
          Length = 237

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V+    VV+A + +++    +  ++  K+  +      A  +G  ADA TL+E 
Sbjct: 34  GSTAIGVKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDDHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|322801573|gb|EFZ22229.1| hypothetical protein SINV_11095 [Solenopsis invicta]
          Length = 207

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +    VMK++  K+ ++    ++A  +G S D     E + K 
Sbjct: 5   IGIQCKDFVLVAADMTTAQSIIVMKSDEHKIHKISDKLVMA-ISGESGDTTQFSEYIGKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIA------DKTITLVITGMGDVL 128
           ++ Y  +        A      +    YLR+     +        D +   +        
Sbjct: 64  IQLYKMRNGYELSPKAAACFTRRNLADYLRSRTPYFVNMLLAGYDDDSGPELYFIDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                    G GG +++S          + EE
Sbjct: 124 CVRVPYATHGYGGMFSMSVLDRYYKYDCTEEE 155


>gi|255626321|gb|ACU13505.1| unknown [Glycine max]
          Length = 237

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|156095029|ref|XP_001613550.1| 20S proteasome subunit beta-3 [Plasmodium vivax SaI-1]
 gi|148802424|gb|EDL43823.1| 20S proteasome subunit beta-3, putative [Plasmodium vivax]
          Length = 218

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 53/206 (25%), Gaps = 28/206 (13%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSAD 67
                +   +L +     V IA D ++     T +  N  K+ ++    +  G +G + D
Sbjct: 3   SIFNYNGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDY-VYVGLSGLATD 61

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------- 120
             TL E L  ++  Y  +             +   L          +  +          
Sbjct: 62  IQTLYELLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLD 121

Query: 121 ---------------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIA 162
                             +G   E ++  +  G           +L       +   E  
Sbjct: 122 DEGKKVCSFEPYLTAYDLIGAKCETKD-FVVNGVTSEQLYGMCESLYIKDQDKDGLFETI 180

Query: 163 RKAMSIAADICVYTNHNIVLETLKVG 188
            + +  A D    +     +  L   
Sbjct: 181 SQCLLSALDRDCLSGWGAEVYVLTPD 206


>gi|119719497|ref|YP_919992.1| proteasome subunit alpha [Thermofilum pendens Hrk 5]
 gi|119524617|gb|ABL77989.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
          Length = 238

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 17/187 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
              T L V+    VV+A + + S    V      K++++     +A  G  G +      
Sbjct: 35  RGMTALGVKAVDGVVLAVEKR-SASPLVE--GTEKIKKIDSHVGVAFAGLFGDARVLIDQ 91

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
                +       +      L++   ++ + +     +R      L A  D+    +I  
Sbjct: 92  ARIYAQSHRLVYGEPIPIELLVKRICDIKQVYTQHGGVRPFGVAFLFAGVDRKGPHLIQT 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
                       AIG+G   AL             EE   +A + +  A +   +T  NI
Sbjct: 152 DPGGTYLRCKARAIGAGAQKALDLFVKEYHDDIKIEEATLLALRGLKEAME-DGFTPENI 210

Query: 181 VLETLKV 187
            L  + V
Sbjct: 211 ELARIDV 217


>gi|115960031|ref|XP_001184237.1| PREDICTED: similar to proteasome subunit beta type 6,9
          [Strongylocentrotus purpuratus]
          Length = 100

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
          +  TTI+ V  DG VVI  D + + G  V      K+ ++         +GS+AD   + 
Sbjct: 31 LTGTTIMAVEFDGGVVIGADSRTTTGSYVANRVTDKLTKVCDRIYCC-RSGSAADTQAIA 89

Query: 73 ERLEKKLEQY 82
          + +   LE +
Sbjct: 90 DIVSYLLEFH 99


>gi|68076731|ref|XP_680285.1| proteasome beta-subunit [Plasmodium berghei strain ANKA]
 gi|56501197|emb|CAH98231.1| proteasome beta-subunit, putative [Plasmodium berghei]
          Length = 256

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 65/216 (30%), Gaps = 43/216 (19%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V+IA D + S G      N +++ ++     +  F+G  ADA  L E 
Sbjct: 9   GTSVIALKYRNGVMIAADKKASYGSYAKFQNVQRIFKI-SNKTVMSFSGELADAQYLHEL 67

Query: 75  L-----------EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------- 113
           L           + K + +  +   S V      R +K       +I+            
Sbjct: 68  LTRVNVNDVVEKKSKYDLHDTKFYHSYVSRLFYNRKNKIDPLFNNIIIAGLNSQEYDDND 127

Query: 114 ------------------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                             DK    +        +     +  G    +AL+  R      
Sbjct: 128 KDILLYSEKQNNEEYKDIDKKDLYIGFVDMHGTQFCEDYITTGYARYFALTLLRNHYKDN 187

Query: 156 NS---AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            +   A  +  + + I        ++ I +  +   
Sbjct: 188 MTEHEARSLLNECLKILYFRDTTASNKIQIVKITSK 223


>gi|240278372|gb|EER41878.1| proteasome component PRE3 [Ajellomyces capsulatus H143]
          Length = 233

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 48/175 (27%), Gaps = 31/175 (17%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++  D + + G  +      K+ ++         +GS+AD   + + +   
Sbjct: 66  MAINFKHGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQAVADIVSYH 124

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITGMGDVLEPENGVMA 136
           L                          +  +I+          V +        +     
Sbjct: 125 L-------------------------GIAGIIIAGYDARHGGQVYSIPLGGSLHKQSYAI 159

Query: 137 IGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLKVG 188
            GSG +Y      A      + E   E  + ++  A      +   I +  L   
Sbjct: 160 GGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQEAIKWDGSSGGVIRMVVLTEK 214


>gi|297829986|ref|XP_002882875.1| hypothetical protein ARALYDRAFT_478846 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328715|gb|EFH59134.1| hypothetical protein ARALYDRAFT_478846 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 237

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V+    VV+A + +++    +  ++  K+  +      A  +G  ADA TL+E 
Sbjct: 34  GSTAIGVKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDDHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|254585221|ref|XP_002498178.1| ZYRO0G04136p [Zygosaccharomyces rouxii]
 gi|238941072|emb|CAR29245.1| ZYRO0G04136p [Zygosaccharomyces rouxii]
          Length = 254

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 50/166 (30%), Gaps = 17/166 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + ++    VV+  + + +L     +    K+ ++    +++ F+G +AD+  L+E
Sbjct: 29  RGTCAVGIKGKDCVVLGCERRSTLKLQDSRITPSKISKIDSHVVLS-FSGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   L            +A   +       +    +         D     +
Sbjct: 88  KARVEAQSHRLTLEDPVSVEYLTRYVAGVQQRYTQSGGVRPFGVATLIAGFDKDDDTPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIAR 163
                  +        IG              +      +A+E  R
Sbjct: 148 YQTEPSGIYSAWTAQTIGRNSKTVREFLEKNYNRDEPPATADECVR 193


>gi|72049590|ref|XP_780745.1| PREDICTED: similar to proteasome subunit beta type 6,9, partial
          [Strongylocentrotus purpuratus]
          Length = 99

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
          +  TTI+ V  DG VVI  D + + G  V      K+ ++         +GS+AD   + 
Sbjct: 31 LTGTTIMAVEFDGGVVIGADSRTTTGSYVANRVTDKLTKVCDRIYCC-RSGSAADTQAIA 89

Query: 73 ERLEKKLEQY 82
          + +   LE +
Sbjct: 90 DIVSYLLEFH 99


>gi|29726314|pdb|1J2P|A Chain A, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
 gi|29726315|pdb|1J2P|B Chain B, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
 gi|29726316|pdb|1J2P|C Chain C, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
 gi|29726317|pdb|1J2P|D Chain D, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
 gi|29726318|pdb|1J2P|E Chain E, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
 gi|29726319|pdb|1J2P|F Chain F, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
 gi|29726320|pdb|1J2P|G Chain G, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
          Length = 246

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 54/173 (31%), Gaps = 15/173 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    V++  D +V   + + K    K+ ++ +    A     +     +  
Sbjct: 33  RGATAIGIKCKEGVILIADKRVGS-KLLEKDTIEKIYKIDEHICAATSGLVADARVLIDR 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA--------MILIADKTITLVITGM 124
            R+E ++ +    +  +  ELAK     K               +++     +  +    
Sbjct: 92  ARIEAQINRLTYDIPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVNEVPKLYETD 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAMSIAADI 172
                 E    AIG G                S ++     +    +SI +++
Sbjct: 152 PSGALLEYKATAIGMGRMAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIESEL 204


>gi|118102245|ref|XP_427542.2| PREDICTED: similar to Proteasome (prosome macropain) subunit beta
           type 4 [Gallus gallus]
          Length = 287

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 59/169 (34%), Gaps = 16/169 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+ +G +VIA D   S G      +  ++ R+    ++ G +G  AD   L + 
Sbjct: 76  GTSVLGVKFEGGIVIAADMMGSYGSLARFRSISRLLRVNDSTVL-GASGDYADFQYLTQI 134

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGDVLEP- 130
           + +  +++       S    A    + +  Y R  +   L     I     G   +    
Sbjct: 135 INQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKINPLWNTVVIGGFYNGESFLGYVD 194

Query: 131 ------ENGVMAIGSGGSYALSAAR--ALMSTQN---SAEEIARKAMSI 168
                 E   +A G G + A    R             A ++  + M I
Sbjct: 195 MLGVAYEAPTLATGYGAALAQPLMREVLEKKPSLIKEEARDLIERCMKI 243


>gi|291612858|ref|YP_003523015.1| 20S proteasome A and B subunits [Sideroxydans lithotrophicus ES-1]
 gi|291582970|gb|ADE10628.1| 20S proteasome A and B subunits [Sideroxydans lithotrophicus ES-1]
          Length = 188

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 66/185 (35%), Gaps = 26/185 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANA-----RKVRRLGKGNIIAGFAGSSADAFT 70
           TTI+ VRK+G+  IA D   + G T + A       + +R       + G A       +
Sbjct: 2   TTIVAVRKNGIAAIAADTLTTFGNTRLHATQDASHDKILRIGDSYVGVCGSAAHHLVLSS 61

Query: 71  LLER-----LEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
           LL +     L  K        +    L        K+   D Y  +    ++     I  
Sbjct: 62  LLAKTPDVQLNSKAAIFETFRKLHPILKEECFLNPKEDEEDPYESSQITALIANSHGIFA 121

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS--------IAAD 171
           + +     +       AIGSG  ++L A     +  + A EIAR  +          AA 
Sbjct: 122 IYSM--REVFEYTQYWAIGSGHEFSLGAMYQAYARSDDATEIARAGVEAGIAFDKNSAAP 179

Query: 172 ICVYT 176
           I +Y+
Sbjct: 180 ITLYS 184


>gi|221052433|ref|XP_002257792.1| proteasome subunit alpha type 5 [Plasmodium knowlesi strain H]
 gi|193807623|emb|CAQ38128.1| proteasome subunit alpha type 5, putative [Plasmodium knowlesi
           strain H]
          Length = 256

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 24/197 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  +  V++A + ++     + K++  K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAVGICVNDGVILASERRI-ASTLIEKSSVEKLLPIDDHIGCA-MSGLMADARTLIDY 91

Query: 75  LEKKLEQYPNQLLRSS----------------VELAKDWRMDKYLRNLEAMILIA--DKT 116
              +   Y      +                   L+ + R     R     +LI   DK 
Sbjct: 92  ARVECNHYKFIYNENINIKSCVELISELALDFSNLSDNKRKKIMSRPFGVALLIGGVDKN 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +               +IGS    A    +   +   + EE   +A   +    +  
Sbjct: 152 GPCLWYTEPSGTNTRFLAASIGSAQEGAELLLQENYNKNMTFEEAEILALTVLRQVME-D 210

Query: 174 VYTNHNIVLETLKVGDE 190
             ++ N+ +  +K  D+
Sbjct: 211 KLSSSNVEIAAIKKSDQ 227


>gi|197129689|gb|ACH46187.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
          Length = 270

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 19/177 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L ++  G V++A D   S G         ++ ++    ++ G +G  AD 
Sbjct: 53  SPM-VTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVL-GASGDLADF 110

Query: 69  FTLLERLE-KKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTIT 118
             L + LE   +++       S    A    + + L              +I       +
Sbjct: 111 QHLRQLLEQMVIDEELLGDGHSYSPRALHSWLTRVLYNRRSKINPLWNTVLIAGVYGGES 170

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------AEEIARKAMSI 168
            +       +  E   +A G G   A    RA +            A E+  + + +
Sbjct: 171 FLGYVDMLGVAYEAPSLATGFGAYLAQPLLRAELERDQDRLPTREEARELLERCLRV 227


>gi|197129686|gb|ACH46184.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
          Length = 271

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 19/177 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L ++  G V++A D   S G         ++ ++    ++ G +G  AD 
Sbjct: 53  SPM-VTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVL-GASGDLADF 110

Query: 69  FTLLERLE-KKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTIT 118
             L + LE   +++       S    A    + + L              +I       +
Sbjct: 111 QHLRQLLEQMVIDEELLGDGHSYSPRALHSWLTRVLYNRRSKINPLWNTVLIAGVYGGES 170

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------AEEIARKAMSI 168
            +       +  E   +A G G   A    RA +            A E+  + + +
Sbjct: 171 FLGYVDMLGVAYEAPSLATGFGAYLAQPLLRAELERDQDRLPTREEARELLERCLRV 227


>gi|224084419|ref|XP_002195022.1| PREDICTED: putative proteasome beta 4 subunit [Taeniopygia guttata]
 gi|197129681|gb|ACH46179.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
 gi|197129682|gb|ACH46180.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
 gi|197129684|gb|ACH46182.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
 gi|197129688|gb|ACH46186.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
          Length = 271

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 19/177 (10%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L ++  G V++A D   S G         ++ ++    ++ G +G  AD 
Sbjct: 53  SPM-VTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVL-GASGDLADF 110

Query: 69  FTLLERLE-KKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTIT 118
             L + LE   +++       S    A    + + L              +I       +
Sbjct: 111 QHLRQLLEQMVIDEELLGDGHSYSPRALHSWLTRVLYNRRSKINPLWNTVLIAGVYGGES 170

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------AEEIARKAMSI 168
            +       +  E   +A G G   A    RA +            A E+  + + +
Sbjct: 171 FLGYVDMLGVAYEAPSLATGFGAYLAQPLLRAELERDQDRLPTREEARELLERCLRV 227


>gi|121511942|gb|ABM55422.1| proteasome beta 2 subunit-like protein [Xenopsylla cheopis]
          Length = 200

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 14/161 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +R D  ++IA D   +    V+  N           I+ G  G S D     E + K 
Sbjct: 5   LGIRFDKFIMIAADM-TNAQSIVVMKNEENKIYEMTDRIVMGINGESGDTTQFAEYIAKN 63

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
           ++ Y  +   S   ++               +   ++  +I   DK     +        
Sbjct: 64  IQLYKMRNGYSVSTVSAANFTRRNLADALRSRNAYHVNMLIGGHDKEGGPQLYFMDYLGA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                    G GG ++LS       +  S EE   I ++ +
Sbjct: 124 CVSLPYACHGYGGFFSLSIMDRYYRSDMSQEEAYAIIKRCI 164


>gi|311334476|emb|CBN08619.1| proteasome (prosome, macropain) subunit, beta type 1 [Microcosmus
           squamiger]
          Length = 181

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 48/167 (28%), Gaps = 21/167 (12%)

Query: 40  TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM 99
           ++   N  K  +L    ++ G AG   DA TL + L+ +++ Y ++  +     A    +
Sbjct: 2   SIHSRNEPKTMQLTSNGVL-GAAGFHGDALTLRKVLKYRIKMYVHEHGKEPSVCAIAAML 60

Query: 100 DKYLRNLEAMILIADK--------TITLVITGMGDVLEPENGVMAIGSGGSYALSAARAL 151
              L                        V +             A GS            
Sbjct: 61  STILYYKRFFPYYVYNLLAGIDEEGKGCVFSYDPVGCYEREAYRAEGSAAELLQPLLDNQ 120

Query: 152 M---------STQNS---AEEIARKAMSIAADICVYTNHNIVLETLK 186
           +             +   A ++ +     AA+  + T   +++  + 
Sbjct: 121 IGYKNMENANREALTKERALQLVKDVFISAAERDITTGDGVLIHVID 167


>gi|255647525|gb|ACU24226.1| unknown [Glycine max]
          Length = 237

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVGSTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNGKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|123296528|emb|CAM26265.1| proteasome (prosome, macropain) subunit beta type 9 (large
           multifunctional protease 2) [Homo sapiens]
 gi|168983776|emb|CAQ08908.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168983881|emb|CAQ08782.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985348|emb|CAQ08496.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985430|emb|CAQ09458.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
          Length = 178

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 40/147 (27%), Gaps = 39/147 (26%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G          +       ++A        ++   E 
Sbjct: 20  GTTIMAVEFDGGVVMGSDSRVSAG----------IELEEPPLVLAAANVVRNISYKYRED 69

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           L   L                             M+   D+     + G    +      
Sbjct: 70  LSAHL-----------------------------MVAGWDQREGGQVYGTLGGMLTRQPF 100

Query: 135 MAIGSGGSYALSAARALMSTQNSAEEI 161
              GSG ++      A      S EE 
Sbjct: 101 AIGGSGSTFIYGYVDAAYKPGMSPEEC 127


>gi|123121510|emb|CAM24979.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|123239244|emb|CAM25801.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|123291819|emb|CAM25485.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168984797|emb|CAQ08451.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985496|emb|CAQ09831.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
 gi|168985577|emb|CAQ10288.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional peptidase 2) [Homo sapiens]
          Length = 178

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 40/147 (27%), Gaps = 39/147 (26%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ V  DG VV+  D +VS G          +       ++A        ++   E 
Sbjct: 20  GTTIMAVEFDGGVVMGSDSRVSAG----------IELEEPPLVLAAANVVRNISYKYRED 69

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           L   L                             M+   D+     + G    +      
Sbjct: 70  LSAHL-----------------------------MVAGWDQREGGQVYGTLGGMLTRQPF 100

Query: 135 MAIGSGGSYALSAARALMSTQNSAEEI 161
              GSG ++      A      S EE 
Sbjct: 101 AIGGSGSTFIYGYVDAAYKPGMSPEEC 127


>gi|67470953|ref|XP_651433.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
 gi|167382427|ref|XP_001736097.1| proteasome subunit beta type [Entamoeba dispar SAW760]
 gi|56468166|gb|EAL46047.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
 gi|165901536|gb|EDR27614.1| proteasome subunit beta type, putative [Entamoeba dispar SAW760]
          Length = 198

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 52/161 (32%), Gaps = 11/161 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + + +     V++A DG    G   ++ +  K+  +    ++    G   D   L + ++
Sbjct: 3   SCIGIVGKDFVLMAVDGNSGRGVITVRNDFNKIYPVQGNRLL-TIIGEGNDRQVLADFVQ 61

Query: 77  KKLEQ-YPNQLLRSSVELAKDWRMDKYL------RNLEAMILIADKTITLVITGMGDVLE 129
           + +   Y    L+S+ +    W   +            +M+L        +         
Sbjct: 62  RNIALNYYRNGLKSTTQSIAHWIRRQVSDSLREGGYQCSMLLGGVDEKPELFMIDQFGTL 121

Query: 130 PENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
                 + G G ++  +       +      A E+ +K + 
Sbjct: 122 VPETYASHGIGSNFVYALLDKNWHSGMEFEEALELMKKCIK 162


>gi|195024021|ref|XP_001985794.1| GH20892 [Drosophila grimshawi]
 gi|193901794|gb|EDW00661.1| GH20892 [Drosophila grimshawi]
          Length = 254

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 20/169 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R    +V+  + +      +     RK+ +L    +I  FAG +ADA  L++
Sbjct: 30  RGSTVVALRTKDCIVMGVEKRAVEPLQIE-RTVRKIIKLDDHLVI-TFAGLTADARILVK 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R +++ + +     R +           L + +      R      LI    +     + 
Sbjct: 88  RAQEEAQNHRRNFERPASVEYITRFMARLKQHYTQSNGRRPFGVSCLIGGFDMDGQPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
                 +  E      G  G              NSA EIA  +   AA
Sbjct: 148 QTEPSGIYYEWSANTTGRLGKTVREHLE-----NNSA-EIASVSDEAAA 190


>gi|239791172|dbj|BAH72089.1| ACYPI004276 [Acyrthosiphon pisum]
 gi|239792790|dbj|BAH72694.1| ACYPI004276 [Acyrthosiphon pisum]
          Length = 210

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 15/172 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ ++ +  V+IA D   +    VMK +  K   +    ++ G  G + D     E + 
Sbjct: 3   TVIGIKFNDFVLIATDMTAAHSIMVMKDDEDKTYNITNN-VVMGVTGEAGDVPRFAEYIT 61

Query: 77  KKLEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMG 125
           + ++ Y  +        A                  Y  N         +  + +     
Sbjct: 62  QNVKLYRMRNGYDLSIPAIATFTRKTVAEHLRSQSPYQVNFMLGGYNPTEKKSHLYFIDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICV 174
              + +    A G GG   ++              A ++ +K +      C+
Sbjct: 122 LGAQVDVPYGAHGYGGMMTITVMDRYYKPDANYQEAYDLLKKCILEVQKRCI 173


>gi|82705582|ref|XP_727029.1| proteasome subunit beta [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482682|gb|EAA18594.1| proteasome beta-subunit [Plasmodium yoelii yoelii]
          Length = 256

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 43/196 (21%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V+IA D + S G      N +++ ++     +  F+G  ADA  L E 
Sbjct: 9   GTSVIALKYRNGVMIAADKKASYGSYAKFQNVQRIFKI-SNKTVMSFSGELADAQYLHEL 67

Query: 75  LEK-----------KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------- 113
           L +           K + +  +   S V      R +K       +I+            
Sbjct: 68  LTRVNVNDVVEKKTKYDLHDTKFYHSYVSRLFYNRKNKIDPLFNNIIIAGLNSQEYDDND 127

Query: 114 ------------------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                             DK    +        +     +  G    +AL+  R      
Sbjct: 128 KDILLYSEKQNNEEYKDIDKKDLYIGFVDMHGTQFCEDYITTGYARYFALTLLRNHYKDN 187

Query: 156 NS---AEEIARKAMSI 168
            +   A  +  + + I
Sbjct: 188 MTEDEARSLLNECLKI 203


>gi|302773341|ref|XP_002970088.1| hypothetical protein SELMODRAFT_267349 [Selaginella moellendorffii]
 gi|300162599|gb|EFJ29212.1| hypothetical protein SELMODRAFT_267349 [Selaginella moellendorffii]
          Length = 237

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++ +  VV+A + +++    +  A+  K+  +      A  +G  ADA TL+E 
Sbjct: 34  GSTAVGLKTNHGVVLAVEKRITS-PLLEPASVEKIMEIDTHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARNETQHHRFSYNEPMSVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDEKGPCL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A ++ +   + + +   AE +A   +    +  V T 
Sbjct: 152 YHTDPSGTFWQCDAKAIGSGSEGADTSLQESYNKEMTLEEAETLALSTLKQVMEEKV-TA 210

Query: 178 HNIVLET 184
            N+ +  
Sbjct: 211 SNVDIAK 217


>gi|254583237|ref|XP_002499350.1| ZYRO0E09724p [Zygosaccharomyces rouxii]
 gi|238942924|emb|CAR31095.1| ZYRO0E09724p [Zygosaccharomyces rouxii]
          Length = 261

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 71/197 (36%), Gaps = 27/197 (13%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T++L+V+ +  VVIA D   S G  +   N  ++  +G   ++ G +G 
Sbjct: 28  MNTQQPI-VTGTSVLSVKYNNGVVIAADNLGSYGSLLRFNNVERLIPVGDNTVV-GISGD 85

Query: 65  SADAFTLLERLEKKLEQYPNQLLRS-----------SVELAKDW--RMDKYLRNLEAMIL 111
            +D   +   +E+ + +       +              LA     R  K+     A+I+
Sbjct: 86  ISDMQHIETLIEELVTENNYDNSFADSVEGLKPSYVFEYLAAVMYHRRSKFNPLWNAIIV 145

Query: 112 IADKT-ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
              +             +   +  +A G G   A+   R L+   +             A
Sbjct: 146 AGVEDGKPFSRYVNLLGVTYSSPSLATGFGSYMAVPLLRKLVDRDSDV-----------A 194

Query: 171 DICVYTNHNIVLETLKV 187
            + + T  N ++E LKV
Sbjct: 195 KLDLQTAENAIVECLKV 211


>gi|224071019|ref|XP_002303332.1| predicted protein [Populus trichocarpa]
 gi|118485571|gb|ABK94637.1| unknown [Populus trichocarpa]
 gi|222840764|gb|EEE78311.1| predicted protein [Populus trichocarpa]
          Length = 237

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  KV  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKVMEIDECIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDEKGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S  +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSTLQEQYNKDLTLKEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|255732587|ref|XP_002551217.1| proteasome component PRE4 [Candida tropicalis MYA-3404]
 gi|240131503|gb|EER31063.1| proteasome component PRE4 [Candida tropicalis MYA-3404]
          Length = 278

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 69/206 (33%), Gaps = 23/206 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T+++  +    +++A D   S G  +   N  ++ ++GK  ++ G +G 
Sbjct: 41  MNTQQPI-VTGTSVVASKFKNGIIMAADHVGSYGSLLRFNNIERLIKVGKETVV-GISGD 98

Query: 65  SADAFTLLERLEKK------LEQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA 113
            +D   +   L++        +      LR+             R  K      A+I+  
Sbjct: 99  ISDLQYIQRLLDELEIEEEVYDNDGGDYLRAPNVHEYLSRVLYNRRSKMNPLWNAIIVGG 158

Query: 114 DKTI--TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEI---AR 163
            +      +       +   +  +A G G   AL   R L+           E+I     
Sbjct: 159 FEKDRTPFLKYVDLLGVTYHSSTIATGFGAHMALPLLRNLIPEDKDFVKVNEEQISKAVE 218

Query: 164 KAMSIAADICVYTNHNIVLETLKVGD 189
            +M +       +     +  +K+ +
Sbjct: 219 DSMRVLYYRDARSGDQYSVVIIKIDE 244


>gi|29726321|pdb|1J2Q|A Chain A, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726322|pdb|1J2Q|B Chain B, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726323|pdb|1J2Q|C Chain C, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726324|pdb|1J2Q|D Chain D, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726325|pdb|1J2Q|E Chain E, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726326|pdb|1J2Q|F Chain F, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
 gi|29726327|pdb|1J2Q|G Chain G, 20s Proteasome In Complex With Calpain-Inhibitor I From
           Archaeoglobus Fulgidus
          Length = 237

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 53/173 (30%), Gaps = 15/173 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    V++  D +V   + +      K+ ++ +    A     +     +  
Sbjct: 24  RGATAIGIKCKEGVILIADKRVGS-KLLEADTIEKIYKIDEHICAATSGLVADARVLIDR 82

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA--------MILIADKTITLVITGM 124
            R+E ++ +       +  ELAK     K               +++     +  +    
Sbjct: 83  ARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEVPKLYETD 142

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAMSIAADI 172
                 E    AIG G +              S ++     +    +SI +++
Sbjct: 143 PSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIESEL 195


>gi|154275784|ref|XP_001538737.1| proteasome component PRE3 precursor [Ajellomyces capsulatus NAm1]
 gi|150413810|gb|EDN09175.1| proteasome component PRE3 precursor [Ajellomyces capsulatus NAm1]
          Length = 174

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 51/183 (27%), Gaps = 33/183 (18%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           + +H  T      +  V++  D + + G  +      K+ ++         +GS+AD   
Sbjct: 1   MVVHGVT--GFLGEDGVILGADSRTTTGAYIANRVTDKLTQVHDTIWCC-RSGSAADTQA 57

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITGMGDVL 128
           + + +   L                          +  +I+          V +      
Sbjct: 58  VADIVSYHL-------------------------GIAGIIIAGYDARHGGQVYSIPLGGS 92

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETL 185
             +      GSG +Y      A      + E   E  + ++  A      +   I +  L
Sbjct: 93  LHKQSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQEAIKWDGSSGGVIRMVVL 152

Query: 186 KVG 188
              
Sbjct: 153 TEK 155


>gi|50540284|ref|NP_001002609.1| proteasome subunit beta type-2 [Danio rerio]
 gi|49900459|gb|AAH75983.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Danio rerio]
          Length = 199

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L +  ++    G + D     E ++K 
Sbjct: 5   IGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMS 167
             +    A G G    LS          + EE     +K + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYRPDLTREEAVDLLKKCLE 165


>gi|52548820|gb|AAU82669.1| proteasome alpha subunit [uncultured archaeon GZfos19A5]
          Length = 263

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 16/180 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+  D +++  + +   +  K+ ++ +    A     +     +  
Sbjct: 34  RGTTAIGIKAQDGVVLLVDKRLTS-RLLEGGSVEKIFKIDEHIGAATSGLVADARVLVDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ Q           LAK     K        LR     +LI         ++  
Sbjct: 93  GRVEAQINQIAYGEAIDVRTLAKKICDFKQAYTQIGGLRPFGTALLIGGVYNGDCYLLET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD--ICVYTNH 178
                  E    AIGSG S          +       A  +  +A+    +  I + T  
Sbjct: 153 DPSGALLEYKATAIGSGRSVVTELFEEKYNEDILLKDAISLGLEALYTVTEGKIDITTID 212


>gi|302807096|ref|XP_002985279.1| hypothetical protein SELMODRAFT_181529 [Selaginella moellendorffii]
 gi|300147107|gb|EFJ13773.1| hypothetical protein SELMODRAFT_181529 [Selaginella moellendorffii]
          Length = 237

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++ +  VV+A + +++    +  A+  K+  +      A  +G  ADA TL+E 
Sbjct: 34  GSTAVGLKTNHGVVLAVEKRITS-PLLEPASVEKIMEIDTHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARNETQHHRFSYNEPMSVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDEKGPCL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A ++ +   + + +   AE +A   +    +  V T 
Sbjct: 152 YHTDPSGTFWQCDAKAIGSGSEGADTSLQESYNKEMTLEEAETLALSTLKQVMEEKV-TA 210

Query: 178 HNIVLET 184
            N+ +  
Sbjct: 211 SNVDIAK 217


>gi|219119376|ref|XP_002180450.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407923|gb|EEC47858.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 227

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 62/228 (27%), Gaps = 51/228 (22%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M+  ++L +     V +A D +   G  ++    R V       ++ GF G   D  +L 
Sbjct: 1   MNGGSLLAMAGKDCVALAVDRRFGSGPALVNVGPRSV-LAPSSLLLVGFTGMEGDVQSLK 59

Query: 73  ERLEKKL-------------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI-- 117
           + L  ++             E       RS   L      ++         L+       
Sbjct: 60  QELAAQVARKYQRGMGISGTENQRFISPRSMTSLTSHVLYNRKRAPYFVEPLVIGLEPCV 119

Query: 118 ---------------------TLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                                  + +          N  +  G+        A A     
Sbjct: 120 SEKKMSPISSDATVNSTTAYRPYLCSLDMIGATSLSNEFVCAGAAIKSIYGTAEAAYQPN 179

Query: 156 NSAEEIAR---KAMSIAADIC--------VY--TNHNIVLETLKVGDE 190
            S +E+     KA   A +          VY  T+  IV   L+  ++
Sbjct: 180 LSGDELVEACGKAFLSALERDCLSGYGAVVYLITSDGIVAYELEGRND 227


>gi|193875852|gb|ACF24562.1| proteasome alpha 5 subunit [Gymnochlora stellata]
          Length = 242

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 77/190 (40%), Gaps = 17/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++    VV++ + ++   + +  ++ +K+ +L      A  +G  ADA TL++ 
Sbjct: 34  GTTAIGIQTAEGVVLSVEKRL-ESKLLEPSSVKKILKLDGHIGCA-MSGIVADARTLVDH 91

Query: 75  LEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
              + + Y               S  +LA D+   K  R     +L+   D+    + + 
Sbjct: 92  ARVEAQNYWFNFDEKIPVRSCVQSICDLALDFGGSKMARPFGVALLVVGVDEKGPALYST 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
                  +    AIG+G   A ++ +   +   +   A+ ++ + +    +  + +  N+
Sbjct: 152 DPSGNYVKYLAKAIGAGSEGAQTSLKDHYNKSMTLAEAKTLSLRILKQVMEEKI-SETNV 210

Query: 181 VLETLKVGDE 190
            +  + V DE
Sbjct: 211 EMAVITVKDE 220


>gi|226471366|emb|CAX70764.1| 20S proteasome subunit alpha 7 [Schistosoma japonicum]
 gi|226471368|emb|CAX70765.1| 20S proteasome subunit alpha 7 [Schistosoma japonicum]
 gi|226489342|emb|CAX75815.1| 20S proteasome subunit alpha 7 [Schistosoma japonicum]
 gi|226489344|emb|CAX75816.1| 20S proteasome subunit alpha 7 [Schistosoma japonicum]
          Length = 254

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 50/173 (28%), Gaps = 16/173 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSS------ 65
           ++ T + ++    VV A +  V+  +       +++  +      ++ GF   +      
Sbjct: 33  NSGTAIAIQGKDCVVFAVENIVTS-KLYEPGCVKRIFNIDDHIGMVVMGFQTDAKAIVEA 91

Query: 66  --ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
              +          ++  Y      +    A           +  ++   +     +   
Sbjct: 92  AREECANYRNSFGSRIPLYSLTERLAMYMHAHTLYSAVRPFGVSVLLGSYESDGPHLYVV 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
                       AIG     A +    L     S EE+ ++A  I     +YT
Sbjct: 152 EPSGSYFAYFGCAIGKAKQNATTEIEKLKINDLSPEELVKEAAKI-----IYT 199


>gi|52548384|gb|AAU82233.1| multicatalytic endopeptidase complex subunit alpha [uncultured
           archaeon GZfos11H11]
          Length = 241

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 55/178 (30%), Gaps = 16/178 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    V +  D +++  + +   +  K+ RL      A     +     +  
Sbjct: 28  RGTTAVGIKAQDGVALLVDKRLTS-RLLEGGSVEKIFRLDTHIGAATSGLVADARMLIDR 86

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ +       +   LAK     K        LR     +LI       T +   
Sbjct: 87  GRIESQINKVVYDEPIAVETLAKKICDYKQAFTQYGGLRPFGTALLIGGVYNGDTYLFET 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS--IAADICVYT 176
                  E    AIGSG S                E+   +  +A+       I + T
Sbjct: 147 DPSGALLEYKATAIGSGRSIVTELLEQQYKEGIKLEDAILLGLEALYKVTEGKIDITT 204


>gi|309425|gb|AAA39439.1| proteasome [Mus musculus]
          Length = 213

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 7/138 (5%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ V  DG VV+  D +VS G  V+     K+  L    I    +GS+ADA  + +  
Sbjct: 72  TTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPL-HQRIFCALSGSAADAQAIADMA 130

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
             +LE +  +L    + LA    +          +L        +I    D  E   GV 
Sbjct: 131 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLA------HLIVAGWDQREGGQGVW 184

Query: 136 AIGSGGSYALSAARALMS 153
             G   +      R    
Sbjct: 185 NHGRDANSTALYHRRFWK 202


>gi|114610314|ref|XP_001139855.1| PREDICTED: similar to Proteasome subunit beta type 1 (Proteasome
           component C5) (Macropain subunit C5) (Multicatalytic
           endopeptidase complex subunit C5) (Proteasome gamma
           chain) isoform 3 [Pan troglodytes]
          Length = 205

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 47/165 (28%), Gaps = 20/165 (12%)

Query: 44  ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL 103
             +  V   G    + G +G   D  TL + +E +L+ Y +   ++    A    +   L
Sbjct: 29  RFSPYVFNGGTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTIL 88

Query: 104 RNLEAMILIADKTITLV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
            +           I  +         +         +   A GS  +         +  +
Sbjct: 89  YSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFK 148

Query: 156 NS------------AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           N             A  + +     AA+  VYT   + +  +   
Sbjct: 149 NMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKE 193


>gi|209733162|gb|ACI67450.1| Proteasome subunit beta type-4 precursor [Salmo salar]
          Length = 256

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 60/194 (30%), Gaps = 15/194 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++    I+      +   
Sbjct: 40  NPM-VTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGDYADYQ 98

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKD--------WRMDKYLRNLEAMILIA-DKTITL 119
           +      +  +++       S    A           R  K       +++       + 
Sbjct: 99  YMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNDESF 158

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICV 174
           +       +  E   +A G G   A    R ++      T++ A  +  + + +      
Sbjct: 159 LGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVLYYRDA 218

Query: 175 YTNHNIVLETLKVG 188
            + +   +  +   
Sbjct: 219 RSYNRHEIAIVTKE 232


>gi|70942672|ref|XP_741474.1| proteasome subunit alpha type 5 [Plasmodium chabaudi chabaudi]
 gi|56519877|emb|CAH80835.1| proteasome subunit alpha type 5, putative [Plasmodium chabaudi
           chabaudi]
          Length = 252

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 24/197 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  D  V++A + ++     + K +  K+  +      A  +G  ADA TL++ 
Sbjct: 30  GSTAIGICVDDGVILASERRI-ASPLIEKDSIEKLLPIDDHIGCA-MSGLMADARTLIDH 87

Query: 75  LEKKLEQYPNQLLRSS----------------VELAKDWRMDKYLRNLEAMILIA--DKT 116
              +   Y      +                   L+   R     R     +LI   DK 
Sbjct: 88  ARVECNHYKFVYNENINIKSCVELISELALDFSNLSDSKRKKIMSRPFGVALLIGGVDKN 147

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +               +IGS    A    +   +   S   AE +A   +    +  
Sbjct: 148 GPCLWYTEPSGTNTRFLAASIGSAQEGAELLLQENYNKNMSFQEAEILALTVLRQVME-D 206

Query: 174 VYTNHNIVLETLKVGDE 190
             ++ N+ +  +K  D+
Sbjct: 207 KLSSSNVEIAAIKKSDQ 223


>gi|325114891|emb|CBZ50448.1| proteasome (Prosome, macropain) subunit, beta type, 1, related
           [Neospora caninum Liverpool]
          Length = 191

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 54/165 (32%), Gaps = 14/165 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ +R     ++A D   +     MK +  K+  +    +  G AG   D     + ++
Sbjct: 3   TVIGIRGRTFALVACDRYANSSILRMKDDEDKLMLVDDNKV-MGLAGQIGDRLQFGDYIQ 61

Query: 77  KKLEQYPNQLLRSSVELA--------KDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           K +  Y  +  +     A          + + +   +++ M+   D+    +        
Sbjct: 62  KNIHLYRFRNNKKLSCAATASFTRQQLAYYLRRSPYHVDVMLAGYDEMGPHLYWMDYLAS 121

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                  A G    +           + + EE    A+ I  ++C
Sbjct: 122 MASVNKGAHGYAAYFLGGLLDRYYHPELTEEE----ALKI-IEMC 161


>gi|20302768|gb|AAM18890.1|AF391294_4 unknown [Branchiostoma floridae]
          Length = 171

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 13/119 (10%)

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPENGV 134
            +     R +     +  + ++L   +  I  A      D T   + T        +   
Sbjct: 1   LHRLSTGREARVCTANRMLKQFLFRYQGYISAALVLGGVDYTGPHLYTVHPHGSTDKLPY 60

Query: 135 MAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLETLKVG 188
           +++GSG   A++              A+++ R A  IAA I   + +  N+ L  +  G
Sbjct: 61  VSMGSGSLAAMATFEDRFKPNMELEEAKKLVRDA--IAAGIFNDLGSGSNVDLCVITKG 117


>gi|89272522|emb|CAJ83434.1| proteasome (prosome macropain) subunit beta type 4 [Xenopus
           (Silurana) tropicalis]
          Length = 243

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 17/193 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+ DG V+IA D   S G      N  ++ ++ +  I+ G +G  AD 
Sbjct: 27  NPM-VTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNESTIL-GASGDYADY 84

Query: 69  FTLLERLEKKL--EQYPNQLLRSSVELAKDWRMD-KYLRNLEAMILIADKTITLVITGMG 125
             L + +++ +  E+        S +    W     Y R  +   L     I     G  
Sbjct: 85  QYLKQVIDQMVIDEELVGDGHNYSPKAVHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGES 144

Query: 126 DVLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADIC 173
            +          E   +A G G   A    R +       ++  A  +  + M +     
Sbjct: 145 FLGYVDKLGVAFEAPTIATGFGAYLAQPLLREVTERKATLSKEEARALIERCMKVLYYRD 204

Query: 174 VYTNHNIVLETLK 186
             + +   + T+ 
Sbjct: 205 ARSYNRFEIATVT 217


>gi|300707553|ref|XP_002995980.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
 gi|239605230|gb|EEQ82309.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
          Length = 205

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 60/181 (33%), Gaps = 13/181 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                + +  +IL +     V I  D ++  G   +  N  KV  L    +  GF G  +
Sbjct: 1   MSDIAEYYGGSILAMIGKSSVSIVTDKRLGAGPISVGKNFTKVYTL-NNRLFFGFTGLVS 59

Query: 67  DAFTLLERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTI 117
           DA  L +++ K    +     R             +    R+  Y  +     + +D   
Sbjct: 60  DAEILYKKIRKNYNLFVQDNKRDMEPSELSNLISFILYQKRLQPYYVSTIVCGITSDNKP 119

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI---AADICV 174
                     ++  +    +G+  +  +  + AL       E++   ++ +   ++D   
Sbjct: 120 YASSMDCIGAMKETDEFATVGTASNNLMGLSEALFYADMEDEDLFTTSVQVFLNSSDRDT 179

Query: 175 Y 175
           +
Sbjct: 180 F 180


>gi|224112951|ref|XP_002332670.1| predicted protein [Populus trichocarpa]
 gi|118483095|gb|ABK93457.1| unknown [Populus trichocarpa]
 gi|222836464|gb|EEE74871.1| predicted protein [Populus trichocarpa]
          Length = 209

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 48/155 (30%), Gaps = 10/155 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  +  V++  D        V K N  K+ +L    +IA  +G S D     E ++K
Sbjct: 4   VFGLVGNDFVIVVADTSAVNSILVHKTNEDKIMKLDSHKLIAA-SGESGDRVQFTEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K    +  ++   D+     +        
Sbjct: 63  NVALYHFRNGIPLTTAAAANFTRGELATALRKNPYMVNILLAGFDRETGPSLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
             +    A G G  + LS       +  S EE   
Sbjct: 123 LHKVDKGAFGYGSFFCLSMMDRHYHSGMSVEEAVE 157


>gi|241604606|ref|XP_002405427.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
           scapularis]
 gi|215500625|gb|EEC10119.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
           scapularis]
          Length = 203

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 13/156 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V      ++A D        V+K +  K+ +L    ++    G + D     E + K 
Sbjct: 5   MGVVFKDFALLAADKTSGYSIIVLKHDEDKIHKLSDN-LLMAVCGEAGDTVQFAEFIAKN 63

Query: 79  LEQYPNQLLRSSVE----------LAKDWRMDKYLRNLEAMILIADKT--ITLVITGMGD 126
           ++ Y  +  RS +           + ++W       ++  ++   DK      +      
Sbjct: 64  IQLYKMRNGRSLLPPFLFSSILEFIVENWSFAATPYSVNLLLAGFDKQAAQPELFYMDYL 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
               +    A G G  + +S          + EE  
Sbjct: 124 ATMAKVPYGAHGYGAFFLISVLDRYYREDMNEEEAV 159


>gi|40217443|emb|CAE46376.1| proteasome, alpha subunit [uncultured archaeon]
 gi|268323826|emb|CBH37414.1| proteasome alpha subunit [uncultured archaeon]
          Length = 245

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 55/178 (30%), Gaps = 16/178 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    V +  D +++  + +   +  K+ RL      A     +     +  
Sbjct: 32  RGTTAVGIKAQDGVALLVDKRLTS-RLLEGGSVEKIFRLDTHIGAATSGLVADARMLIDR 90

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ +       +   LAK     K        LR     +LI       T +   
Sbjct: 91  GRIESQINKVVYDEPIAVETLAKKICDYKQAFTQYGGLRPFGTALLIGGVYNGDTYLFET 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS--IAADICVYT 176
                  E    AIGSG S                E+   +  +A+       I + T
Sbjct: 151 DPSGALLEYKATAIGSGRSIVTELLEQQYKEGIKLEDAILLGLEALYKVTEGKIDITT 208


>gi|244790059|ref|NP_001156440.1| proteasome beta 2 subunit [Acyrthosiphon pisum]
 gi|239789655|dbj|BAH71438.1| ACYPI004276 [Acyrthosiphon pisum]
          Length = 210

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 15/172 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ ++ +  V+IA D   +    VMK +  K   +    ++ G  G + D     E + 
Sbjct: 3   TVIGIKFNDFVLIATDMTAAHSIMVMKDDEDKTYNITNN-VVMGVTGEAGDVPRFAEYIT 61

Query: 77  KKLEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMG 125
           + ++ Y  +        A                  Y  N         +  + +     
Sbjct: 62  QNVKLYRMRNGYDLSIPAIATFTRKTVAEHLRSQSPYQVNFMLGGYNPAEKKSHLYFIDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICV 174
              + +    A G GG   ++              A ++ +K +      C+
Sbjct: 122 LGAQVDVPYGAHGYGGMMTITVMDRYYKPDANYQEAYDLLKKCILEVQKRCI 173


>gi|90076880|dbj|BAE88120.1| unnamed protein product [Macaca fascicularis]
          Length = 215

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 12/153 (7%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKT-I 117
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
           + +       +  E   +A G G   A     +
Sbjct: 165 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLHAS 197


>gi|324516623|gb|ADY46583.1| Proteasome subunit beta type-4 [Ascaris suum]
          Length = 229

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 21/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ +  DG V I  D  VS G+     +  +  R+    ++A F G  AD   L   
Sbjct: 13  GTSVVAIAFDGGVAIMTDRVVSYGKMARYKHVSRQYRVNDNVVVA-FGGDHADFQWLQNV 71

Query: 75  LEKK---LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----------ADKTITLV 120
           +E++   L  Y      S   L        Y R      +             D+    +
Sbjct: 72  IERQRCMLRAYDENADLSPRMLHAYLTSLLYYRRTRMNPIWNTLIVGGLQKENDEMKPFI 131

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMS 167
                  +      +A G G      A            +++ A+ + RK + 
Sbjct: 132 GVITQRGVAYRAQSVATGMGAMLLNQAVETEFRKVGGRLSKDEAKALLRKCLE 184


>gi|148224895|ref|NP_001080890.1| proteasome subunit beta type-4 [Xenopus laevis]
 gi|33417170|gb|AAH56119.1| Psmb4 protein [Xenopus laevis]
          Length = 248

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 17/175 (9%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+ DG V+IA D   S G      N  ++ ++ +  I+ G +G  AD 
Sbjct: 32  NPM-VTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTIL-GASGDYADY 89

Query: 69  FTLLERLEKKL--EQYPNQLLRSSVELAKDWRMD-KYLRNLEAMILIADKTITLVITGMG 125
             L + +++ +  E+        S +    W     Y R  +   L     I     G  
Sbjct: 90  QYLKQVIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGES 149

Query: 126 DVLEP-------ENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
            +          E   +A G G   A    R +   + +     A ++  + M +
Sbjct: 150 FLGYVDKLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKV 204


>gi|223647028|gb|ACN10272.1| Proteasome subunit beta type-6 precursor [Salmo salar]
 gi|223672893|gb|ACN12628.1| Proteasome subunit beta type-6 precursor [Salmo salar]
          Length = 202

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 11/160 (6%)

Query: 39  QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW- 97
             V      K+ ++         AGS ADA  + +  + ++  +  Q+    +  A    
Sbjct: 26  SYVSSKTINKLIQVHDRIFCC-IAGSLADAQAVTKAAKFQISFHSIQMESPPLVKAAASV 84

Query: 98  ---RMDKYLRNLEAMILIADKTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARAL 151
                      L+A  + A         V T     +         GSG +Y    A A 
Sbjct: 85  LKELCYNNKEELQAGFITAGWDRKKGPQVYTVALGGMLLSQPFTIGGSGSTYIYGYADAK 144

Query: 152 MSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKVG 188
                S EE    A  A+++A      +     L  +   
Sbjct: 145 YKPDMSKEECLQFATNALALAMGRDNVSGGVAHLVVITEE 184


>gi|157115065|ref|XP_001652543.1| proteasome subunit beta type [Aedes aegypti]
 gi|108877077|gb|EAT41302.1| proteasome subunit beta type [Aedes aegypti]
          Length = 270

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 6/143 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VVIA D  VS G      +  +V ++     I G  G  AD   +   
Sbjct: 57  GTSVVGLKFANGVVIAADKLVSYGSLARFHDVDRVYKI-NDKTIIGIGGDFADFQYIKRH 115

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           +++K ++             +    + + + N         K + L I   G        
Sbjct: 116 IDQKVVDDMCLADKNELKPKSLYNWLTRVMYNRR----CDFKPLYLDIVVGGMQDGEPFL 171

Query: 134 VMAIGSGGSYALSAARALMSTQN 156
                 G +Y  +       T  
Sbjct: 172 GHVNLRGRAYTSNVVATGYGTHL 194


>gi|225441983|ref|XP_002265602.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
 gi|225441985|ref|XP_002265563.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
 gi|147791356|emb|CAN66160.1| hypothetical protein VITISV_007438 [Vitis vinifera]
          Length = 237

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNQDLTLQEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|3915809|sp|P28024|PSB4_XENLA RecName: Full=Proteasome subunit beta type-4; Short=Proteasome beta
           chain; AltName: Full=Macropain beta chain; AltName:
           Full=Multicatalytic endopeptidase complex beta chain;
           AltName: Full=Proteasome chain 3; Flags: Precursor
          Length = 242

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 17/175 (9%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+ DG V+IA D   S G      N  ++ ++ +  I+ G +G  AD 
Sbjct: 26  NPM-VTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTIL-GASGDYADY 83

Query: 69  FTLLERLEKKL--EQYPNQLLRSSVELAKDWRMD-KYLRNLEAMILIADKTITLVITGMG 125
             L + +++ +  E+        S +    W     Y R  +   L     I     G  
Sbjct: 84  QYLKQVIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGES 143

Query: 126 DVLEP-------ENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
            +          E   +A G G   A    R +   + +     A ++  + M +
Sbjct: 144 FLGYVDKLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKV 198


>gi|194770872|ref|XP_001967511.1| GF20703 [Drosophila ananassae]
 gi|190618521|gb|EDV34045.1| GF20703 [Drosophila ananassae]
          Length = 268

 Score = 62.7 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 15/178 (8%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
            ++ A     +++L +R DG V+IA D  VS G      +  +V ++ +  ++ G    +
Sbjct: 48  QRNTARITTGSSVLGIRFDGGVMIAADTMVSYGSLSRYQSIDRVFKINEKILLGGGDDFA 107

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD--------K 115
                     +K +                   + +  Y R      L  D        +
Sbjct: 108 DIQSIKRTIDQKMIADQCRADEIEMKPTELAMWLTRVLYNRRTRMNPLFIDVVVGGVNAE 167

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNSAEE---IARKAMSI 168
               +          E+ V+A G     A+   R       + +AEE   + RK M +
Sbjct: 168 GKPFLGNVDLRGRFYEDFVVATGFARHLAIPLVRESKPAGREFTAEEASNLIRKCMEV 225


>gi|256076800|ref|XP_002574697.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
           mansoni]
 gi|238659910|emb|CAZ30930.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
           mansoni]
          Length = 246

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    ++ ++  K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTGIGIKTSEGVVMAVEKRVNS-TLIIPSSIEKIFEVDKHIACA-VSGLVADARTLIER 91

Query: 75  LEKKLEQYP---------NQLLRSSVELAKDWRMDKY-------LRNLEAMILIADKTIT 118
              +   +            + ++   LA  +  D            +  +    D+   
Sbjct: 92  ARTEAAHHWFVYNEKMTIEDVTKAVSNLALAFGDDDMESGAMSRPFGVALLFAGVDERGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A  A + +     +  E  + A+SI
Sbjct: 152 QLYHMDPSGTYIRYEAKAIGSGSEGAQQALQEIYHKNMTLHEGCKHALSI 201


>gi|294658626|ref|XP_460968.2| DEHA2F13904p [Debaryomyces hansenii CBS767]
 gi|202953267|emb|CAG89326.2| DEHA2F13904p [Debaryomyces hansenii]
          Length = 251

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 64/190 (33%), Gaps = 16/190 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    K+ ++    ++A FAG +ADA  L++
Sbjct: 29  RGTCAVGVKGKETVVLGCEKRTTLKLQDPRITPSKICKVDNHVLLA-FAGLNADARILVD 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   L  S         +A   +       +    +        ++  +  +
Sbjct: 88  KARVEAQSHRLTLEDSVTVEYLTKYVAGVQQKYTQSGGVRPFGIATIIAGFDSNDNVPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-N 179
                  +       AIG                  S E+  +  +    ++ V T   N
Sbjct: 148 YQTEPSGVYNAWKAHAIGRSSKTVKEFLEKHYEEDMSDEQTIKLTIKSLLEV-VQTGAKN 206

Query: 180 IVLETLKVGD 189
           I +  LK GD
Sbjct: 207 IEVSVLKSGD 216


>gi|52548649|gb|AAU82498.1| multicatalytic endopeptidase complex subunit alpha [uncultured
           archaeon GZfos18B6]
          Length = 245

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 55/178 (30%), Gaps = 16/178 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    V +  D +++  + +   +  K+ RL      A     +     +  
Sbjct: 32  RGTTAVGIKAQDGVALLVDKRLTS-RLLEGGSVEKIFRLDTHIGAATSGLVADARMLIDR 90

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ +       +   LAK     K        LR     +LI       T +   
Sbjct: 91  GRIESQINKVVYDEPIAVETLAKKICDYKQAFTQYGGLRPFGTALLIGGVYNGDTYLFET 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS--IAADICVYT 176
                  E    AIGSG S                E+   +  +A+       I + T
Sbjct: 151 DPSGALLEYKATAIGSGRSIVTELLEQQYKEGIKLEDAILLGLEALYKVTEGKIDITT 208


>gi|56755093|gb|AAW25726.1| SJCHGC01130 protein [Schistosoma japonicum]
          Length = 184

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 11/153 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + + ++ +       IA D +  +    +  +  KV  LG    + GF G + D  T+ +
Sbjct: 7   NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYV-GFPGLATDNQTVFQ 65

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMI-------LIADKTITLVITGM 124
           RL+ +   Y  +  R+         +    Y R             +    +   V    
Sbjct: 66  RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQN 156
               +   N  +  G+           L     
Sbjct: 126 LIGCVCEANDFVVSGTCTEQMYGMCETLWEENM 158


>gi|156836888|ref|XP_001642484.1| hypothetical protein Kpol_322p3 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113019|gb|EDO14626.1| hypothetical protein Kpol_322p3 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 195

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 12/151 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL ++    V++A    V+ G +++K    K R L K  I+  F G + D     E ++ 
Sbjct: 4   ILGIKVRDSVILATSKAVTRGISILKDTDDKSRELSKH-ILMSFTGEAGDTVQFAEYIQA 62

Query: 78  KLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADKTI--TLVITGMGD 126
            ++ Y  +        A               +    +  +I   D       +      
Sbjct: 63  NIQLYSIRENYELTPHAVSSFVRKELAKSLRSRKPYQVNVLIGGYDTKNAKPELYQIDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS 157
             + E    A G  G Y  S          S
Sbjct: 123 GTKVELPYAAHGYSGFYTFSLLDHHYRPDMS 153


>gi|52550031|gb|AAU83880.1| proteasome alpha subunit [uncultured archaeon GZfos34H10]
          Length = 245

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 16/178 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    V +  D +++  + +   +  K+ RL +    A     +     +  
Sbjct: 32  RGTTAVGIKAQDGVALLVDKRLTS-RLLEGGSVEKIFRLDEHIGAATSGLVADARMLIDR 90

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ +           LAK     K        LR     +LI         +   
Sbjct: 91  GRIESQINKVVYDEPIDVETLAKKICDYKQAFTQYGGLRPFGTALLIGGVYNGDKFLFET 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS--IAADICVYT 176
                  E    AIGSG S                  A  +  +A+       I + T
Sbjct: 151 DPSGALLEYKATAIGSGRSIVTELLEQQYKEGIKLKDAILLGLEALYKVTEGKIDITT 208


>gi|11498101|ref|NP_069326.1| proteasome subunit alpha [Archaeoglobus fulgidus DSM 4304]
 gi|6093781|sp|O29760|PSA_ARCFU RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|2650136|gb|AAB90747.1| proteasome, subunit alpha (psmA) [Archaeoglobus fulgidus DSM 4304]
          Length = 246

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 53/173 (30%), Gaps = 15/173 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    V++  D +V   + +      K+ ++ +    A     +     +  
Sbjct: 33  RGATAIGIKCKEGVILIADKRVGS-KLLEADTIEKIYKIDEHICAATSGLVADARVLIDR 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA--------MILIADKTITLVITGM 124
            R+E ++ +       +  ELAK     K               +++     +  +    
Sbjct: 92  ARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEVPKLYETD 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAMSIAADI 172
                 E    AIG G +              S ++     +    +SI +++
Sbjct: 152 PSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIESEL 204


>gi|185135483|ref|NP_001117779.1| proteasome subunit N3 [Oncorhynchus mykiss]
 gi|13991680|gb|AAK51461.1|AF361366_1 proteasome subunit N3 [Oncorhynchus mykiss]
          Length = 256

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 58/188 (30%), Gaps = 14/188 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+  G V+IA D   S G      N  ++ ++    I+      +   +     
Sbjct: 45  GTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGDYADYQYMKQII 104

Query: 75  LEKKLEQYPNQLLRSSVELAKD--------WRMDKYLRNLEAMILIA-DKTITLVITGMG 125
            +  +++       S    A           R  K       +++       + +     
Sbjct: 105 EQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNDESFLGYVDK 164

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICVYTNHNI 180
             +  E   +A G G   A    R ++      T++ A  +  + + +       + +  
Sbjct: 165 LGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVLYYRDARSYNRH 224

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 225 EIAIVTKE 232


>gi|58332066|ref|NP_001011182.1| proteasome beta 4 subunit [Xenopus (Silurana) tropicalis]
 gi|55778114|gb|AAH86496.1| proteasome (prosome macropain) subunit beta type 4 [Xenopus
           (Silurana) tropicalis]
          Length = 248

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 17/193 (8%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+ DG V+IA D   S G      N  ++ ++ +  I+ G +G  AD 
Sbjct: 32  NPM-VTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNESTIL-GASGDYADY 89

Query: 69  FTLLERLEKKL--EQYPNQLLRSSVELAKDWRMD-KYLRNLEAMILIADKTITLVITGMG 125
             L + +++ +  E+        S +    W     Y R  +   L     I     G  
Sbjct: 90  QYLKQVIDQMVIDEELVGDGHNYSPKAVHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGES 149

Query: 126 DVLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADIC 173
            +          E   +A G G   A    R +       ++  A  +  + M +     
Sbjct: 150 FLGYVDKLGVAFEAPTIATGFGAYLAQPLLREVTERKATLSKEEARALIERCMKVLYYRD 209

Query: 174 VYTNHNIVLETLK 186
             + +   + T+ 
Sbjct: 210 ARSYNRFEIATVT 222


>gi|255570811|ref|XP_002526358.1| proteasome subunit beta type, putative [Ricinus communis]
 gi|223534317|gb|EEF36029.1| proteasome subunit beta type, putative [Ricinus communis]
          Length = 193

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 56/165 (33%), Gaps = 24/165 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    +++A D   S G T+   +  +++ +GK +++ G +G  +D   +L  
Sbjct: 30  GTSVVALKYKDGILMAADMGASYGSTLRYKSVERIKPIGKHSLL-GASGEISDFQEILRY 88

Query: 75  LEK--------------KLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD---- 114
           L++              K +        S         + +  Y R  +   L       
Sbjct: 89  LDELIWEVVLICIACSPKPDDNMWDDGNSLGPKEVHNYLKRVMYNRRNKFNPLWNSVVLG 148

Query: 115 ---KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
                   + T     +  E+  +A G G  +A    R       
Sbjct: 149 GVKNGQKYLGTVSMIGVNYEDNHVATGFGNHFAWPLLRDEWHENL 193


>gi|225719778|gb|ACO15735.1| Proteasome subunit beta type-4 precursor [Caligus clemensi]
          Length = 254

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 16/169 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++  ++ DG V++  D  VS G+     N  ++ ++    +I      +         
Sbjct: 41  GSSVFGIKYDGGVLLGADTLVSYGKMARYPNVPRLFQVNDTTVITCSGDYADFQHITSLV 100

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVITGMG 125
              ++E+   Q        +    + +YL NL +                    +     
Sbjct: 101 ERMQIEEERTQNEVVMQPRSLHRYLTRYLYNLRSKFDPKWTNIVVAGLQDGEPFLGYISM 160

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN-------SAEEIARKAMS 167
             L      +  G GG+ AL   R ++            A +I  +++ 
Sbjct: 161 IGLAFTEDAVTTGLGGAIALPLMRKMLDQNKGKLLTFEEATKIMEESLK 209


>gi|242019946|ref|XP_002430419.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
 gi|212515549|gb|EEB17681.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
          Length = 206

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V++A D   +    VMK +  K+  L    ++A   G S D     E + K 
Sbjct: 5   MGMSCKDFVILAADMTKTQSILVMKNDEEKLFPLTDKMVMA-VCGDSGDTSQFSEFISKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIAD-------KTITLVITGMGDV 127
           ++ Y  +   +    A      +    YLR+     +               +       
Sbjct: 64  IQLYKMRNGYALSPSAASNFTRRNLADYLRSRTPYNVNLLLGGYDDTTDEFELYFCDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +      G GG + LS    L     + EE
Sbjct: 124 SLVKTPYAVHGFGGHFCLSIMDQLHRKDLTIEE 156


>gi|12229923|sp|Q9M4T8|PSA5_SOYBN RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
           proteasome alpha subunit E; AltName: Full=20S proteasome
           subunit alpha-5
 gi|7839485|gb|AAF70292.1|AF255338_1 20S proteasome subunit [Glycine max]
          Length = 237

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 211 NNVDIAK 217


>gi|283468185|emb|CAN84588.1| low molecular mass polyprotein 2 [Melanogrammus aeglefinus]
          Length = 90

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI+ V  DG VV+  D +VS G +V+     K+  L +    A  +GS+ADA T+ E +
Sbjct: 1   TTIMAVEFDGGVVLGSDSRVSAGASVVNRVMNKLSPLHERIYCA-LSGSAADAQTIAETV 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
             +L+ +  +L    +  +    +       
Sbjct: 60  NYQLDVHSMELGEDPLVCSAATLVKNISYKY 90


>gi|297742930|emb|CBI35797.3| unnamed protein product [Vitis vinifera]
          Length = 293

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 67/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 90  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 147

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 148 ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 207

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   +   +   AE IA   +    +  V T 
Sbjct: 208 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNQDLTLQEAETIALSILKQVMEEKV-TP 266

Query: 178 HNIVLET 184
           +N+ +  
Sbjct: 267 NNVDIAK 273


>gi|61612103|gb|AAX47291.1| proteasome beta 2 subunit [Clonorchis sinensis]
          Length = 201

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 47/154 (30%), Gaps = 11/154 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++ +   ++A D + S     MK +  K+  L    I+A   G + D     E +++ 
Sbjct: 5   VGIQANDFCLVAADTRSSRSIITMKHDQNKMFPLST-RILAAACGEAGDTTQFAEFIQQN 63

Query: 79  LEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIAD------KTITLVITGMGDVL 128
           ++ Y  +                 +   LR+ +   +         +    +        
Sbjct: 64  MQLYEIRNGYELSPYGAANFTRSNLANALRSRKPYQVNMIIAGFDTQKGPELFYMDYLAT 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +   +  G G    LS          + ++  
Sbjct: 124 LAKVPFVVHGYGSYLTLSVLDRDYRPDMTVDQAV 157


>gi|148684144|gb|EDL16091.1| mCG13231, isoform CRA_a [Mus musculus]
          Length = 112

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN 105
            T+ +RL+ +L  Y  +  R          +   L  
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYE 97


>gi|51013345|gb|AAT92966.1| YFR050C [Saccharomyces cerevisiae]
          Length = 266

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 67/208 (32%), Gaps = 25/208 (12%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +    + +  T++++++ D  V+IA D   S G  +      ++  +G   ++ G +G
Sbjct: 31  MVNTQQPI-VTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVV-GISG 88

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKT 116
             +D   +   L+  + +       +          + +      Y R  +   L     
Sbjct: 89  DISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAII 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST------------QNSAEEIARK 164
           +  V +     L   N +    S  + A      + +               +  ++A +
Sbjct: 149 VAGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLVRKVVDRESDIPKTTVQVAEE 208

Query: 165 AMSIAA----DICVYTNHNIVLETLKVG 188
           A+  A          ++ N  L  +   
Sbjct: 209 AIVNAMRVLYYRDARSSRNFSLAIIDKN 236


>gi|159042303|ref|YP_001541555.1| proteasome subunit alpha [Caldivirga maquilingensis IC-167]
 gi|157921138|gb|ABW02565.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
          Length = 248

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 62/172 (36%), Gaps = 16/172 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + ++    VV+A + +  LG  +   +  KV  +      A  AG  +DA  L++
Sbjct: 34  RGWATVGLKCSDGVVLAAEKR-KLGPLIDLNSIEKVYMIDTHIG-AASAGLLSDARILID 91

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
              ++ + Y            + +   +L + +     +R     ++I   DK    +  
Sbjct: 92  YAREQAQVYRLLYDEQADVEYITKRISDLEQAYTQHGGVRPFGIALIIGGVDKNGPRLYQ 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
                +       A+GSG +  L         +    S  ++  K++S+ A+
Sbjct: 152 TDPSGIYFGYYATALGSGSTLILEYLEKNYKYEMDINSCIKLTIKSLSLVAE 203


>gi|72387538|ref|XP_844193.1| proteasome beta 7 subunit [Trypanosoma brucei TREU927]
 gi|12656357|gb|AAK00845.1|AF290945_1 20S proteasome beta 7 subunit [Trypanosoma brucei]
 gi|62176539|gb|AAX70645.1| proteasome beta 7 subunit [Trypanosoma brucei]
 gi|70800726|gb|AAZ10634.1| proteasome beta 7 subunit [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|261327337|emb|CBH10312.1| proteasome beta 7 subunit, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 218

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 60/168 (35%), Gaps = 15/168 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++ +G V++A D  +S G      N  +++ +G    +    G  AD   + E+
Sbjct: 4   GGSVIGLKYNGGVLLASDTLLSYGSLAKWPNIPRIKIIGPHTAVCA-TGDYADFQDMTEQ 62

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTITLVITGMG 125
           LE  +E+    +            + +++ +  +                 +  +     
Sbjct: 63  LESHVERQRRYINDVLRPDEIFCYLHRHIYHKRSNFEPCLCSFVVCGCQGGVPFLGGIDS 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
              +  +  +A G G   A+   R  +      ++  A E+ +  + +
Sbjct: 123 VGTQWRDDCVATGYGAYIAIPLLRKALEKPGGLSREEAVEVIKNCLRV 170


>gi|225719784|gb|ACO15738.1| Proteasome subunit beta type-4 precursor [Caligus clemensi]
          Length = 254

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 16/169 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++  ++ DG V++  D  VS G+     N  ++ ++    +I      +         
Sbjct: 41  GSSVFGIKYDGGVLLGADTLVSYGKMARYPNVPRLFQVNDTTVITCSGDYADFQHITSLV 100

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVITGMG 125
              ++E+   Q        +    + +YL NL +                    +     
Sbjct: 101 ERMQIEEERTQNEVVMQPRSLHRYLTRYLYNLRSKFDPKWTNIVVAGLQDGEPFLGYISM 160

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQN-------SAEEIARKAMS 167
             L      +  G GG+ AL   R ++            A +I  +++ 
Sbjct: 161 IGLAFTEDAVTTGLGGAIALPLMRKMLDQNKGKRLTFEEATKIMEESLK 209


>gi|221121088|ref|XP_002158188.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 242

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 55/170 (32%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    ++  +  K+  +      A  +G  AD+ T++++
Sbjct: 34  GSTAIGIQTAEGVVLAVERRITS-PLIIPKSIEKIYEVDTHIGCA-MSGLIADSRTMIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIADKTITL- 119
              + + +           +    +                  R     +LI        
Sbjct: 92  ARIEGQNHWFTYNEPISVESLTQSLSNLALAFGNKDSDKGAMSRPFGVALLIGGVDDKGA 151

Query: 120 -VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A    + +     +  E   +A++I
Sbjct: 152 RLFHLDPSGTFLQYDAKAIGSASEGAQQTLQEVYHKSMTLTEACTQALTI 201


>gi|156379569|ref|XP_001631529.1| predicted protein [Nematostella vectensis]
 gi|156218571|gb|EDO39466.1| predicted protein [Nematostella vectensis]
          Length = 242

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  +      A  +G  AD+ T++++
Sbjct: 34  GSTAIGIQTSEGVVVAVEKRITS-PLMESSSVEKIVEIDSHIGCA-MSGLIADSRTMIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      S    +    +                  R     +L    D+   
Sbjct: 92  ARVEAQNHWFTYNESMSLESITQAVSNLALEFGDDDAREGAMSRPFGVALLFGGFDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A  A +       +  E  + A++I
Sbjct: 152 QLFHLDPSGTFIQYDAKAIGSGSEGAQHALQETYHQSMTLSEACKSALTI 201


>gi|291237254|ref|XP_002738546.1| PREDICTED: proteasome beta 9 subunit isoform 1 proprotein-like
           isoform 2 [Saccoglossus kowalevskii]
          Length = 185

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 52/182 (28%), Gaps = 47/182 (25%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           M  T+I+ V     VVI  D + + G                                  
Sbjct: 27  MTGTSIMAVEFKDGVVIGADSRTTTG---------------------------------- 52

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITGMGDVLE 129
                 +E     L++++  L K+     Y   L A I+ A         V T     + 
Sbjct: 53  ------IEMNEPPLVKTAANLFKEM-CYNYRDELTAGIICAGWDEREGGQVYTIPLGGML 105

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLK 186
                   GSG +Y      +      + EE  +    ++++A +    +   + L  + 
Sbjct: 106 LRQPFSIGGSGSTYIYGYVDSSFKKDMTKEECLKFCAHSLALAMNRDGSSGGVVRLAAIT 165

Query: 187 VG 188
             
Sbjct: 166 KE 167


>gi|225704026|gb|ACO07859.1| Proteasome subunit beta type 4 precursor [Oncorhynchus mykiss]
          Length = 256

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 58/188 (30%), Gaps = 14/188 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+  G V+IA D   S G      N  ++ ++    I+      +   +     
Sbjct: 45  GTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGDYADYQYMKQII 104

Query: 75  LEKKLEQYPNQLLRSSVELAKD--------WRMDKYLRNLEAMILIA-DKTITLVITGMG 125
            +  +++       S    A           R  K       +++       + +     
Sbjct: 105 EQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNDESFLGYVDK 164

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICVYTNHNI 180
             +  E   +A G G   A    R ++      T++ A  +  + + +       + +  
Sbjct: 165 LGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVLYYRDARSYNRH 224

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 225 EIAIVTKE 232


>gi|68470996|ref|XP_720505.1| hypothetical protein CaO19.2755 [Candida albicans SC5314]
 gi|68471452|ref|XP_720274.1| hypothetical protein CaO19.10269 [Candida albicans SC5314]
 gi|46442133|gb|EAL01425.1| hypothetical protein CaO19.10269 [Candida albicans SC5314]
 gi|46442375|gb|EAL01665.1| hypothetical protein CaO19.2755 [Candida albicans SC5314]
          Length = 127

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 2/110 (1%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V +  +      +  T+L +  +   V+AGD +   G ++      K+  +G   I+   
Sbjct: 19  VPIEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDD-ILMTA 77

Query: 62  AGSSADAFTLLERLEKKL-EQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
            G +AD   L++R ++ L     +   +     +    + + L       
Sbjct: 78  NGFAADGVALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFP 127


>gi|256076802|ref|XP_002574698.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
           mansoni]
 gi|238659911|emb|CAZ30931.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
           mansoni]
          Length = 221

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    ++ ++  K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTGIGIKTSEGVVMAVEKRVNS-TLIIPSSIEKIFEVDKHIACA-VSGLVADARTLIER 91

Query: 75  LEKKLEQYP---------NQLLRSSVELAKDWRMDKY-------LRNLEAMILIADKTIT 118
              +   +            + ++   LA  +  D            +  +    D+   
Sbjct: 92  ARTEAAHHWFVYNEKMTIEDVTKAVSNLALAFGDDDMESGAMSRPFGVALLFAGVDERGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A  A + +     +  E  + A+SI
Sbjct: 152 QLYHMDPSGTYIRYEAKAIGSGSEGAQQALQEIYHKNMTLHEGCKHALSI 201


>gi|213402545|ref|XP_002172045.1| proteasome subunit alpha type-3 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000092|gb|EEB05752.1| proteasome subunit alpha type-3 [Schizosaccharomyces japonicus
           yFS275]
          Length = 264

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 63/182 (34%), Gaps = 14/182 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A+T + ++    V++A D  V+      KAN +++  + +   +A   G   D   L+ 
Sbjct: 42  NASTCIGIKCKDGVILALDSVVTSKLLKPKAN-KRIATVDRHVGLAA-TGFIPDGQHLVN 99

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++   + +      +      R+  Y+             + + +   DK    +  
Sbjct: 100 RAREEAMNWRDNYRSPILGDTLADRLGNYVQVFTCYSSVRPFGVMSFLSTYDKQGPHLYM 159

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA-ADICVYTNHNIV 181
              + +       A G G   A +    L     S ++  ++A  I        TN    
Sbjct: 160 IEPNGVYWGYNGAAAGKGRQVARNELEKLDFKNISMKDAVKEAAKILYTTRDEETNKQHE 219

Query: 182 LE 183
           +E
Sbjct: 220 IE 221


>gi|259089494|ref|NP_001158547.1| Proteasome subunit beta type 4 [Oncorhynchus mykiss]
 gi|225704766|gb|ACO08229.1| Proteasome subunit beta type 4 precursor [Oncorhynchus mykiss]
          Length = 256

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 61/194 (31%), Gaps = 15/194 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++    I+      +   
Sbjct: 40  NPM-VTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDTTILGASGDYADYQ 98

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGD 126
           +      +  +++       S    A    + +  Y R  +   L     +     G   
Sbjct: 99  YMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVVGGFYNGESF 158

Query: 127 VLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICV 174
           +          E   +A G G   A    R ++      T++ A  +  + + +      
Sbjct: 159 LGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVLYYRDA 218

Query: 175 YTNHNIVLETLKVG 188
            + +   +  +   
Sbjct: 219 RSYNRHEIAIVTEE 232


>gi|159464144|ref|XP_001690302.1| 20S proteasome alpha subunit G [Chlamydomonas reinhardtii]
 gi|158284290|gb|EDP10040.1| 20S proteasome alpha subunit G [Chlamydomonas reinhardtii]
          Length = 249

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T++ +R    VV+A +  V     V  +N R++  + +   +A  AG + D   +  
Sbjct: 33  NSSTVVGLRCKDGVVLACEKLVLSKLLVEGSN-RRIHNIDRHVGVA-VAGLAPDGRMVAN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIA--DKTITLVIT 122
           R   +   Y               R+  Y         LR   A +L+A  DK    +  
Sbjct: 91  RAWDEAASYKRVYGEPIPGHVLCERVGSYVHMFNLYWSLRPYGAALLLAAYDKNGPALYA 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A+G     A +    L   + SA E   +A+ I
Sbjct: 151 VDPSGTSLRYFGTAVGKARQAAKNEIEKLKLNELSAREAVIEAVKI 196


>gi|149054058|gb|EDM05875.1| rCG33987, isoform CRA_b [Rattus norvegicus]
          Length = 112

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 39/95 (41%), Gaps = 1/95 (1%)

Query: 11  VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D  T
Sbjct: 4   MSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDVQT 62

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN 105
           + +RL+ +L  Y  +  R          +   L  
Sbjct: 63  VAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYE 97


>gi|119567808|gb|EAW47423.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
           CRA_d [Homo sapiens]
          Length = 205

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 47/165 (28%), Gaps = 20/165 (12%)

Query: 44  ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL 103
             +  V   G    + G +G   D  TL + +E +L+ Y +   ++    A    +   L
Sbjct: 29  RFSPYVFNGGTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTIL 88

Query: 104 RNLEAMILIADKTITLV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
            +           I  +         +         +   A GS  +         +  +
Sbjct: 89  YSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFK 148

Query: 156 NS------------AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           N             A  + +     AA+  VYT   + +  +   
Sbjct: 149 NMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKE 193


>gi|124088088|ref|XP_001346958.1| Proteasome subunit [Paramecium tetraurelia strain d4-2]
 gi|145474683|ref|XP_001423364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057347|emb|CAH03331.1| Proteasome subunit, putative [Paramecium tetraurelia]
 gi|124390424|emb|CAK55966.1| unnamed protein product [Paramecium tetraurelia]
          Length = 236

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 57/167 (34%), Gaps = 14/167 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ +  +G V++  D   S G      N +K+ ++ K  I A  +G  +D   +++ 
Sbjct: 21  GGSVIALVYNGGVIVGTDTLCSYGSMAAFKNVKKIAQISKNTIYA-SSGEFSDFQQVVKE 79

Query: 75  LEKKLE---QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG-------M 124
           L K      QY + +  S  +         Y +  +   L     I     G        
Sbjct: 80  LAKIDRSALQYDDGVHPSPKDYGNFLARLSYKKRCKINPLYLQNVIAGFHNGERYLSLVD 139

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSI 168
                 E+  +  G    +  +      +     + A+++ R+   +
Sbjct: 140 IYGTYLESNFITTGFASYFCKAIISNYWNENCTLDQAKQVIRECFKV 186


>gi|157876370|ref|XP_001686541.1| 20s proteasome beta 7 subunit [Leishmania major strain Friedlin]
 gi|157876376|ref|XP_001686544.1| 20s proteasome beta 7 subunit [Leishmania major strain Friedlin]
 gi|157876382|ref|XP_001686547.1| 20s proteasome beta 7 subunit [Leishmania major strain Friedlin]
 gi|157876389|ref|XP_001686550.1| 20s proteasome beta 7 subunit [Leishmania major strain Friedlin]
 gi|157876395|ref|XP_001686553.1| 20s proteasome beta 7 subunit [Leishmania major strain Friedlin]
 gi|157876401|ref|XP_001686556.1| 20s proteasome beta 7 subunit [Leishmania major strain Friedlin]
 gi|157876408|ref|XP_001686559.1| proteasome beta 7 subunit [Leishmania major strain Friedlin]
 gi|23928432|gb|AAN40019.1| 20S proteasome beta 7 subunit [Leishmania major]
 gi|68129615|emb|CAJ08173.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
           Friedlin]
 gi|68129618|emb|CAJ08176.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
           Friedlin]
 gi|68129621|emb|CAJ08179.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
           Friedlin]
 gi|68129624|emb|CAJ08183.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
           Friedlin]
 gi|68129627|emb|CAJ08186.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
           Friedlin]
 gi|68129630|emb|CAJ08189.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
           Friedlin]
 gi|68129633|emb|CAJ08192.1| putative proteasome beta 7 subunit [Leishmania major strain
           Friedlin]
          Length = 220

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 57/151 (37%), Gaps = 11/151 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++ +G V++A D  +S G      N  +++ LG  + +    GS AD   + ++
Sbjct: 4   GASVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCA-TGSYADFQMMAKQ 62

Query: 75  LE---KKLEQYPNQLLRSSVELAKDWRMDKYLRN-------LEAMILIADKTITLVITGM 124
           +E   ++   Y N    +  E+        Y +         + + +    + T +    
Sbjct: 63  VEDNIERQRMYYNVDELNPSEVFSYLHRSIYQKRCDFEPCLCQMVFIGVRDSETFLAAVD 122

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                 E+  +A G G   AL   R  +   
Sbjct: 123 DVGTRWEDDCVATGYGAYIALPLLRQALEKN 153


>gi|294866972|ref|XP_002764910.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|239864746|gb|EEQ97627.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
          Length = 247

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 28/194 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
             TT + VR     V+A + +      + K       RK+ R+ +  ++A FAG +ADA 
Sbjct: 29  KGTTAVGVRGKDTAVLAVERKA-----IPKLQDPRTVRKILRIDQHVMLA-FAGLNADAR 82

Query: 70  TLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMIL------IADKTI 117
            L  +   + + Y   +         +  +A   +   Y        +        ++  
Sbjct: 83  VLANKARVECQSYRLNVEDQPTVDYVARYIAGVQQQYTYKGGARPFGISTLIIGQNEQKK 142

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICV 174
             +               AIG                  S     E+A +A+    D   
Sbjct: 143 PQLYQTDPSGSFNSWKAAAIGRNSKTVSDYLEKNYKEDMSEQETIEMAVRALLEVVDS-- 200

Query: 175 YTNHNIVLETLKVG 188
            +  N+ +  +K  
Sbjct: 201 -SGKNVEVCLMKSD 213


>gi|76156596|gb|AAX27775.2| SJCHGC06458 protein [Schistosoma japonicum]
          Length = 226

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 50/173 (28%), Gaps = 16/173 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSS------ 65
           ++ T + ++    VV A +  V+  +       +++  +      ++ GF   +      
Sbjct: 33  NSGTAIAIQGKDCVVFAVENIVTS-KLYEPGCVKRIFNIDDHIGMVVMGFQTDAKAIVEA 91

Query: 66  --ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
              +          ++  Y      +    A           +  ++   +     +   
Sbjct: 92  AREECANYRNSFGSRIPLYSLTERLAMYMHAHTLYSAVRPFGVSVLLGSYESDGPHLYVV 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
                       AIG     A +    L     S EE+ ++A  I     +YT
Sbjct: 152 EPSGSYFAYFGCAIGKAKQNATTEIEKLKINDLSPEELVKEAAKI-----IYT 199


>gi|325179900|emb|CCA14302.1| proteasome subunit beta type2 putative [Albugo laibachii Nc14]
          Length = 207

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 53/171 (30%), Gaps = 25/171 (14%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           +I  +     V++A D + +    V K +  K+ +L    ++ G AG  +D     E ++
Sbjct: 3   SIFGIVGKDFVLVAADAKAARSILVYKDDEDKMVQLDSHKLLLG-AGPQSDRVEFSEYIQ 61

Query: 77  KKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMIL--------------------I 112
           K L+ Y  +        A        + +YLR     +                      
Sbjct: 62  KNLKLYELRNGVRLDGSATANYIRGELARYLRQGPYQVNLLVGAVDQVSKAEAQLTPEKA 121

Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
           A   I  +          +      G G ++ LS          + EE  R
Sbjct: 122 AGTPIPSLHWIDYLGSMVKMDYGVHGYGSNFCLSILDKEWQPNLTLEEATR 172


>gi|50304199|ref|XP_452049.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641181|emb|CAH02442.1| KLLA0B11660p [Kluyveromyces lactis]
          Length = 195

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 51/153 (33%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +R    V++A    V+ G +++K +  K R+L     +  F+G + D     E ++  
Sbjct: 5   LGIRVKDSVILASSKAVTRGISILKDSDDKTRQLLPHT-LMSFSGEAGDTVQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIAD-------KTITLVITGMGDV 127
           ++ Y  +        A        + K LR+ +   +               +       
Sbjct: 64  MQLYLIRENYELSPHAASSFVRTELAKSLRSRKPFQVNVLIGGYDTKNEKAELYQIDYLG 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
            + E    A G  G Y  S          + +E
Sbjct: 124 TKVELPYAAHGYAGFYTFSLLDRHYREDLTVDE 156


>gi|114051245|ref|NP_001040387.1| proteasome alpha 3 subunit [Bombyx mori]
 gi|95102712|gb|ABF51297.1| proteasome alpha 3 subunit [Bombyx mori]
          Length = 255

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 44/165 (26%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T++ +R    VV A +  ++       AN R        G  +AG    +       
Sbjct: 33  NSGTVIGLRGKDGVVFAVEKLITSKLYEPGANKRIFHIDEHVGMAVAGLISDARQIVETA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLE---AMILIADKTITLVITG 123
                              L          + +   +R       M    D     +   
Sbjct: 93  RSEASNYRSQYGSPVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGTWTDYEGPQMYML 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       A+G     A +    L     + +E+ R+A  I
Sbjct: 153 DPSGVSFSYFGCAVGKAKQAAKTEIEKLKLGDLTVKELVREAARI 197


>gi|71725697|gb|AAZ38994.1| proteasome-like protein [Oxyuranus scutellatus]
          Length = 174

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 40/154 (25%), Gaps = 20/154 (12%)

Query: 55  GNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
              + G +G   D  TL   LE +L+ Y +   +     A    +   L +         
Sbjct: 9   DTTVIGCSGFHGDCLTLTTILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPYYVY 68

Query: 115 KTITLV--------ITGMGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNSAEEI--- 161
             I  +         +         +   A GS  +           +     A ++   
Sbjct: 69  NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGLKNMQGARQLPLS 128

Query: 162 -------ARKAMSIAADICVYTNHNIVLETLKVG 188
                   +     AA+  VYT   +    +   
Sbjct: 129 LEKALQLVKDVFISAAERDVYTGDALETCIITKD 162


>gi|294866970|ref|XP_002764909.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|294866974|ref|XP_002764911.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|239864745|gb|EEQ97626.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|239864747|gb|EEQ97628.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
          Length = 247

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 51/171 (29%), Gaps = 22/171 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
             TT + VR     V+A + +      + K       RK+ R+ +  ++A FAG +ADA 
Sbjct: 29  KGTTAVGVRGKDTAVLAVERKA-----IPKLQDPRTVRKILRIDQHVMLA-FAGLNADAR 82

Query: 70  TLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMIL------IADKTI 117
            L  +   + + Y   +         +  +A   +   Y        +        ++  
Sbjct: 83  VLANKARVECQSYRLNVEDQPTVDYVARYIAGVQQQYTYKGGARPFGISTLIIGQNEQKK 142

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             +               AIG                  S +E    A+  
Sbjct: 143 PQLYQTDPSGSFNSWKAAAIGRNSKTVSDYLEKNYKEDMSEQETIEMAVRA 193


>gi|164661205|ref|XP_001731725.1| hypothetical protein MGL_0993 [Malassezia globosa CBS 7966]
 gi|159105626|gb|EDP44511.1| hypothetical protein MGL_0993 [Malassezia globosa CBS 7966]
          Length = 256

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T+L +     VV+A + +V+        ++ K+ +L  GN+++G AG +ADA +L+ 
Sbjct: 30  HAGTVLGILASDGVVLAAEKKVTSKLLEQDKSSEKIFQL-SGNVLSGVAGMTADANSLVN 88

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
                 ++Y           QL++   +L + +     LR     +L A         + 
Sbjct: 89  YARNAAQKYLLSYDEDIPVEQLVQRLCDLKQGYTQFGGLRPFGVSLLYAGYDAHHAFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
                          IG     A S  +       +     + A+ +AA
Sbjct: 149 QSDPSGNYSGWKATCIGMNNGTATSLLKQEYKDTMT----VKDALGLAA 193


>gi|301110258|ref|XP_002904209.1| proteasome subunit beta type-2, putative [Phytophthora infestans
           T30-4]
 gi|66270177|gb|AAY43418.1| 20S proteasome subunit [Phytophthora infestans]
 gi|262096335|gb|EEY54387.1| proteasome subunit beta type-2, putative [Phytophthora infestans
           T30-4]
          Length = 197

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           +I  +     V++A D +V     V K +  K   L +  ++   +G  +D     E ++
Sbjct: 3   SIFGIVGKDFVLLAADCKVVRSILVYKDDEDKSINLDEHKVMVT-SGPQSDRLAFGEYIQ 61

Query: 77  KKLEQYPNQLLRSSV----------ELAKDWRMDKYLRNLEAMILIADKTI---TLVITG 123
           K ++ Y  +   +            ELA+  R   Y  NL    + A         +   
Sbjct: 62  KNMKLYELRNGVTLNGPATANYVRGELARFLRRAPYQVNLLIGAVDASPEQKAEPSLHWI 121

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                  +    A G G  + LS          + +E A++ + 
Sbjct: 122 DYLGSMVKVNFGAHGYGAHFCLSIFDREWKPDMTLDE-AKETLK 164


>gi|156545990|ref|XP_001607430.1| PREDICTED: similar to proteasome zeta subunit [Nasonia vitripennis]
          Length = 242

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 55/170 (32%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + +     V++A + + +    +M+    +       +I    +G  AD+ T+++R
Sbjct: 34  GWTAIGICTSEGVILAVEKRTT--SFLMEPTMVEKIVEVDKHIGCVSSGLMADSRTMIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     +L A  D+   
Sbjct: 92  ARVECQNHWFTYNEKMSVESATQAVSNLAIQFGDSDDDGSAMSRPFGVALLFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A  + + +     + +E  + A+ I
Sbjct: 152 QLFHMDPSGTFVQYDAKAIGSGSEGAQQSLQEVYHKSMTLKEATKAALKI 201


>gi|126140328|ref|XP_001386686.1| hypothetical protein PICST_63922 [Scheffersomyces stipitis CBS
           6054]
 gi|126093970|gb|ABN68657.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 233

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 65/190 (34%), Gaps = 16/190 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    K+ ++    ++A FAG +ADA  L++
Sbjct: 13  RGTCAVGVKGKESVVLGCEKRTTLKLQDPRITPSKICKIDNHALLA-FAGLNADARILVD 71

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   L  +         +A   +       +    +        ++ T+  +
Sbjct: 72  KARVEAQSHRLTLEDAVSIEYLTKYVAGVQQKYTQSGGVRPFGIATIIAGFDSNDTVPKL 131

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-N 179
                  +       AIG                  S E+  +  +    ++ V T   N
Sbjct: 132 YQTEPSGVYNAWKAHAIGRSSKTVREFLEKHYEEDLSDEQTVKLTIKSLLEV-VQTGAKN 190

Query: 180 IVLETLKVGD 189
           I +  LK G+
Sbjct: 191 IEVSVLKTGN 200


>gi|325116606|emb|CBZ52159.1| proteasome A-type and B-type domain-containing protein [Neospora
           caninum Liverpool]
          Length = 267

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 50/179 (27%), Gaps = 27/179 (15%)

Query: 16  TT--ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
           TT  +L +     +++  D   S G+     +  +   LG    +A  G           
Sbjct: 35  TTSSVLGITYKDGILMVADTLASYGRMTRFKDTSRFFTLGTHTAVASTGDYSDHQMLERT 94

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL------------ 119
           L R   K   + +  +R++ +         Y +            +              
Sbjct: 95  LSRYALKDFLHDDNSVRTAHQYGALLSRLMYQKRSRMNPWWLSVIVGGYQGERTETREVS 154

Query: 120 --------VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
                   +          E  V+A G G  +A++  R       S   A ++  + M 
Sbjct: 155 DKCAKPFVLGYVDMYGTFYEEDVIATGLGRYFAITLMRNRHRPDMSEDEARQLLEECMR 213


>gi|308321153|gb|ADO27730.1| proteasome subunit beta type-4 [Ictalurus furcatus]
          Length = 258

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 59/194 (30%), Gaps = 15/194 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++    I+      +   
Sbjct: 42  NPM-VTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDATILGASGDYADYQ 100

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGD 126
           +      +  +++       S    A    + +  Y R      L     I     G   
Sbjct: 101 YIKQVIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSRMNPLWNTVVIGGFYNGESF 160

Query: 127 VLEP-------ENGVMAIGSGGSYALSAARALMST-----QNSAEEIARKAMSIAADICV 174
           +          E   +A G G   A    R ++       ++ A  +  + + +      
Sbjct: 161 LGYVDKLGVAYEAPAVATGFGAYLAQPLMREVLENKVEVSKDEARALIERCLKVLYYRDA 220

Query: 175 YTNHNIVLETLKVG 188
            + +   +  +   
Sbjct: 221 RSYNRHEIAIVTQE 234


>gi|298674555|ref|YP_003726305.1| proteasome endopeptidase complex subunit alpha [Methanohalobium
           evestigatum Z-7303]
 gi|298287543|gb|ADI73509.1| proteasome endopeptidase complex, alpha subunit [Methanohalobium
           evestigatum Z-7303]
          Length = 255

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 52/171 (30%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT   ++    VV+  D +++  + +   +  K+ ++     +A     +     +  
Sbjct: 35  RGTTAAGIKAKDGVVLLVDKRITS-RLIEAESIEKIFQIDAHIGVATSGLVADARTLVDR 93

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++ +           +AK     K                +I   D     +   
Sbjct: 94  ARVEAQVNRVSFDEPIGVEVIAKKICDHKQTYTQFGGVRPYGTAVLIAGIDDNKPRLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
                  E    AIG+G +  +    A  S      SA  +   A+    +
Sbjct: 154 DPSGALLEYRATAIGAGRNSFMETFEANYSDDMDIDSAIMLGMDALYNVTE 204


>gi|225718548|gb|ACO15120.1| Proteasome subunit alpha type-5 [Caligus clemensi]
          Length = 243

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 19/171 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  +      A F+G   D+  L+++
Sbjct: 34  GSTAIGIQSSAGVVLAVEKRITS-PLMEPSSIEKIVEIDSHMACA-FSGLIPDSKMLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKY--------------LRNLEAMILIADKTI--- 117
              + + +           +    +                  R     +L A       
Sbjct: 92  ARVECQSHWFNYAEKMKIESVAQSVSNLAIQFGDSEVRGAALSRPFGVALLFAGVDAEKG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             +               AIGSG   A  + +       S +E  ++AM+I
Sbjct: 152 PQLFHMDPSGTYIRFDAKAIGSGSEGAQQSLQEKYHASMSIQEAIKEAMTI 202


>gi|326492526|dbj|BAK02046.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 237

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 66/187 (35%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    +  ++  K+  + +  +    +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKDGVVLAVEKRVTS-PLLEPSSVEKIMEIDEH-VGCAMSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPLTVESTTQAICDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   + +     AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKELALQEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVLET 184
            N+ +  
Sbjct: 211 TNVDIAK 217


>gi|257053863|ref|YP_003131696.1| proteasome subunit alpha [Halorhabdus utahensis DSM 12940]
 gi|256692626|gb|ACV12963.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
          Length = 271

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 15/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL- 72
             T  + VR    VV+A D ++     + + +  K+ +      IA     +     +  
Sbjct: 35  RGTASIGVRTADGVVLAVDKRI-RSPLMERDSVEKIHKADDHIGIASAGHVADARQLIDF 93

Query: 73  -------ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--KTITLVITG 123
                   RL          L +   +  + +      R     ++IA        +   
Sbjct: 94  SRRQAQVNRLRYDEAIGVETLTKQVTDHVQQYTQIGGARPFGVALMIAGVSDGEPSLYET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNI 180
                  E   +AIG+          A    + + E    +A KA+   A+  + T   +
Sbjct: 154 DPSGTPYEWKALAIGADRGDIREYLEANYDEEMTLEAGVGLALKALESVAEGGL-TPEGV 212

Query: 181 VLETLKVGD 189
            + T+ V D
Sbjct: 213 GIATIPVED 221


>gi|303388305|ref|XP_003072387.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
 gi|303301527|gb|ADM11027.1| 20S proteasome subunit [Encephalitozoon intestinalis ATCC 50506]
          Length = 206

 Score = 61.9 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 54/177 (30%), Gaps = 13/177 (7%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            +  +IL +  D  V I  D ++ +    +  +  ++ ++G    + G      D   LL
Sbjct: 8   FYGGSILAIASDEAVAIMNDKRLGMSSITVSKDFTRIHKIGPRLYV-GLPVFVPDTQVLL 66

Query: 73  ERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
             + K    +         P +L      L    R   Y+ +     L +D    +    
Sbjct: 67  RSIRKNYNLFKLEEQREMEPEELTSMISFLLYSKREAPYITSPIVAGLRSDGKPYISGMD 126

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTN 177
               +      +A G+     +    AL       E +     +A   + D    + 
Sbjct: 127 SIGSITSPRDFVAAGTSEENLMGICEALYRPGMDEENLFVTCTQAFLNSIDRDALSG 183


>gi|302842257|ref|XP_002952672.1| 20S proteasome alpha subunit G [Volvox carteri f. nagariensis]
 gi|300262016|gb|EFJ46225.1| 20S proteasome alpha subunit G [Volvox carteri f. nagariensis]
          Length = 249

 Score = 61.9 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 60/166 (36%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T+L +R    VV+A +  V     V  +N R++  + +   +A  AG + D   +  
Sbjct: 33  NSSTVLGLRCKDGVVLACEKLVLSKLLVEGSN-RRIHNIDRHVGVA-VAGLAPDGRMVAN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIA--DKTITLVIT 122
           R   +   Y               R+  Y         LR   A +L+A  DK    +  
Sbjct: 91  RAWDEAASYKRVYGEPIPGHVLCERVGSYAHMFNLYWSLRPYGATVLMAVYDKNGPALYA 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A+G G   A +    L  ++ +  E   +A+ I
Sbjct: 151 IDPSGSSLRYFGTAVGKGRQAAKNEIEKLKLSEMTCREAVIEAVKI 196


>gi|118776894|ref|XP_306986.3| Anopheles gambiae str. PEST AGAP012608-PA [Anopheles gambiae str.
           PEST]
 gi|116133232|gb|EAA02777.3| AGAP012608-PA [Anopheles gambiae str. PEST]
          Length = 271

 Score = 61.5 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ +     V+IA D  +S G      +  +V R+    ++ G  G  AD   +   
Sbjct: 58  GTSVVGLMFKDGVIIAADKLISYGSLARFHDVDRVYRINDKTVL-GIGGDFADFQYIKRH 116

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           +++K ++             +    + + + N  +      + + L +   G        
Sbjct: 117 IDQKVIDDQCLDDKNEMKPRSFYNWLTRVMYNRRSEF----QPLYLDLVIGGMQDGEPFL 172

Query: 134 VMAIGSGGSYALSAARALMSTQN 156
                 G SY  +       T  
Sbjct: 173 GHVNLRGRSYTSNVVATGYGTHL 195


>gi|123439006|ref|XP_001310279.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121892042|gb|EAX97349.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 251

 Score = 61.5 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 23/174 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++ + +     V+ A + ++S    +   +  KV  +     +   AG +AD  T++E 
Sbjct: 34  GSSAVAILCPEGVIFAVEKRLSSQLLIAS-SVEKVYAIDDHVGVV-MAGLAADGRTMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR----------------MDKYLRNLEAMILIADKTI- 117
           +  + + +           A                      +  R     +L+A     
Sbjct: 92  MRVEAQNHRFSFDEPIGIKAVTQSVCDLALAFGEGRRKKGDGQMSRPFGTALLVAGIENG 151

Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
              +          E    AIG G   A +  R L     +   AE++A   + 
Sbjct: 152 KCHLFHTDPSGTYTECRARAIGGGSEGAEALLRDLYKDGMTLHEAEDLALSTLR 205


>gi|330893400|gb|EGH26061.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
          mori str. 301020]
          Length = 51

 Score = 61.5 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/50 (70%), Positives = 43/50 (86%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
          TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG++
Sbjct: 2  TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGAT 51


>gi|158297668|ref|XP_317860.3| AGAP011444-PA [Anopheles gambiae str. PEST]
 gi|157014687|gb|EAA12997.3| AGAP011444-PA [Anopheles gambiae str. PEST]
          Length = 271

 Score = 61.5 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ +     V+IA D  +S G      +  +V R+    ++ G  G  AD   +   
Sbjct: 58  GTSVVGLMFKDGVIIAADKLISYGSLARFHDVDRVYRINDKTVL-GIGGDFADFQYIKRH 116

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           +++K ++             +    + + + N  +      + + L +   G        
Sbjct: 117 IDQKVIDDQCLDDKNEMKPRSFYNWLTRVMYNRRSEF----QPLYLDLVIGGMQDGEPFL 172

Query: 134 VMAIGSGGSYALSAARALMSTQN 156
                 G SY  +       T  
Sbjct: 173 GHVNLRGRSYTSNVVATGYGTHL 195


>gi|289672016|ref|ZP_06492906.1| ATP-dependent protease peptidase subunit [Pseudomonas syringae
          pv. syringae FF5]
          Length = 50

 Score = 61.5 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/48 (72%), Positives = 41/48 (85%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
          TTI++VR+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG
Sbjct: 2  TTIVSVRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAG 49


>gi|313127016|ref|YP_004037286.1| proteasome endopeptidase complex, archaeal, alpha subunit
           [Halogeometricum borinquense DSM 11551]
 gi|312293381|gb|ADQ67841.1| proteasome endopeptidase complex, archaeal, alpha subunit
           [Halogeometricum borinquense DSM 11551]
          Length = 255

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 62/197 (31%), Gaps = 29/197 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR    VV+A D + S    +   +  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGTASIGVRTPEGVVLAADKR-SRSPLMEPTSVEKIHKSDDHIGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVIT 122
              ++ +    +         L +   +  + +      R     +LI         +  
Sbjct: 93  FARRQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGIENGTPRLYE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH- 178
                   E   ++IG+                 + +E   +A +A++        TN  
Sbjct: 153 TDPSGTPYEWKAVSIGADRGDLQGFLEENYRDDLTLDEGIGLALRAIAS-------TNDD 205

Query: 179 -----NIVLETLKVGDE 190
                 + + T+    E
Sbjct: 206 EIEEGGVDVATISAETE 222


>gi|148234532|ref|NP_001084761.1| hypothetical protein LOC431796 [Xenopus laevis]
 gi|47125243|gb|AAH70836.1| MGC84496 protein [Xenopus laevis]
          Length = 199

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 16/162 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + ++ +  V++A D  V     + MK +  K+ ++ +  ++    G + D     E ++K
Sbjct: 5   IGIQGNDFVLVAADT-VCANSIIQMKHDMDKMFKMSEKILLLC-VGEAGDTVQFAEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTI-TLVITGMGDV 127
            ++ Y  +        A      + L          ++  ++   D+     +       
Sbjct: 63  NVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHAGPSLYYMDYLS 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
              +    A G G    LS          +   A E+ +K +
Sbjct: 123 ALAKTRFAAHGYGAYLTLSILDRYYKPDLTREDAVELLKKCI 164


>gi|86741593|ref|YP_481993.1| hypothetical protein Francci3_2906 [Frankia sp. CcI3]
 gi|86568455|gb|ABD12264.1| hypothetical protein Francci3_2906 [Frankia sp. CcI3]
          Length = 207

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T I+ V++DG VVI GD     G ++      KV R      I GF  S      L   L
Sbjct: 18  TCIVGVQQDGRVVIGGDSAGVAGWSITVRADTKVFR--NSEFIMGFTDSFRMGQLLRYSL 75

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNL---------EAMILIADKTITLVITGMGD 126
              + Q  +     + +     R                   + L+  +     I     
Sbjct: 76  VPPVPQDWDLDRFMATDFIAVVRDCLRDGGFARNDSGNESGGLFLVGLRGHLYRIDSDYQ 135

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
           +    +   A+GSG  YA  +  +        ++  R A+  AA 
Sbjct: 136 IGRSADNYYAVGSGDEYACGSLHSTR--GLDPKQRVRMALEAAAH 178


>gi|116778950|gb|ABK21070.1| unknown [Picea sitchensis]
          Length = 215

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 15/166 (9%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  DG  +IAGD        V K +  K+  L    ++ G +G S D     E ++K
Sbjct: 4   VFGLVGDGFTLIAGDTSAVQSIVVQKTSEDKIMILDSHKLL-GASGESGDRVQFTEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K   ++  ++   DK +   +        
Sbjct: 63  NVHLYQFRNGIPLSTAATANFTRGELATALRKNPYSVNLLLAGFDKDVGPSLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
             +   +A G G  +ALS          S      +A+  A D C+
Sbjct: 123 LHKVDKVAFGYGAYFALSMMDRYYHKGMS----VEEAIEFA-DKCI 163


>gi|169773719|ref|XP_001821328.1| proteasome subunit beta type-2 [Aspergillus oryzae RIB40]
 gi|238491732|ref|XP_002377103.1| proteasome component Pre1, putative [Aspergillus flavus NRRL3357]
 gi|83769189|dbj|BAE59326.1| unnamed protein product [Aspergillus oryzae]
 gi|220697516|gb|EED53857.1| proteasome component Pre1, putative [Aspergillus flavus NRRL3357]
          Length = 203

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 45/153 (29%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V++A       G T++KA   K R+L K + +  F+G + D     E ++  
Sbjct: 5   LGITGKDFVLVAASKAAMRGPTILKAEDDKTRQLNKHS-LMAFSGEAGDTVQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELAKDW-----------RMDKYLRNLEAMILIADKTITLVITGMGDV 127
           ++ Y  +        A                  Y  NL    +        +       
Sbjct: 64  IQLYTMRNDTELGPNAVANFVRGELARSLRSRSPYTVNLLLAGVDGITQKPHLYWIDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          S EE
Sbjct: 124 SLAPVPYAAHGYAQYYCLSTLDKHHHPDISLEE 156


>gi|312086301|ref|XP_003145022.1| proteasome A-type and B-type family protein [Loa loa]
 gi|307759814|gb|EFO19048.1| proteasome A-type and B-type family protein [Loa loa]
          Length = 238

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 25/181 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++  +  DG V +  D  VS G+     +  +  R+    +I  F G  AD   L   
Sbjct: 22  GTSVCALAYDGGVAVMSDRLVSYGKMARYRHITRQYRVNNH-VIITFGGDHADFQWLQNV 80

Query: 75  LEKK---LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----------ADKTITLV 120
           +E++   L+ +      S   L        Y R      L             D+    +
Sbjct: 81  IERQTCELKSHDPDADLSPKMLHGFLTSLLYYRRTRMNPLWNTLVVAGLQVQNDQLEPFI 140

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN------SAEEIARKAMSIAADICV 174
                  +      +A G G               +       A +I RK++    ++ +
Sbjct: 141 GVITSRGVAYRTKSVATGMGAMLLNQVIETEYRKNDGKLSKEQAVDILRKSL----ELSI 196

Query: 175 Y 175
           Y
Sbjct: 197 Y 197


>gi|195998175|ref|XP_002108956.1| hypothetical protein TRIADDRAFT_19919 [Trichoplax adhaerens]
 gi|190589732|gb|EDV29754.1| hypothetical protein TRIADDRAFT_19919 [Trichoplax adhaerens]
          Length = 230

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 57/170 (33%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    +V+A + +++        +  K+ ++      A  +G  AD+ TL++ 
Sbjct: 34  GSTAIGIKTSEGIVLAVERRITS-PLTEPESMEKILKIDNHIGCA-MSGLIADSRTLVDT 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    + K                R     +L A  D+   
Sbjct: 92  ARVESQSHWFTYNETMTVESVTHTVSKLTLQFGDDDAGAGAMSRPFGVALLFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          E    AIGSG   A S    L     + +E     ++I
Sbjct: 152 QLFHLDPSGTYFECEAKAIGSGSEGAQSQLHELYHQNMNMKEALITVLTI 201


>gi|322822780|gb|EFZ28743.1| proteasome beta 7 subunit, putative [Trypanosoma cruzi]
          Length = 218

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 56/168 (33%), Gaps = 15/168 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ V+ +G V++A D  +S G      N  +++ +G   ++    G  AD   +   
Sbjct: 4   GGSVIGVKYNGGVLLACDTLLSYGSLAKWPNIPRMKLVGAYTVMCA-TGDYADFQEMTTM 62

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN---------LEAMILIADKTITLVITGMG 125
           +E  + +       +         + +++ +            ++         +     
Sbjct: 63  IENHVNRQQMYGGGALTPNEVFCYLQRHVYHKRSQFEPCLCRFVVAGCHGGEPFLGGVDD 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
                 +  +A G G   AL   R  +      T+  A  + +  + +
Sbjct: 123 VGTRWTDDCVAAGYGAYVALPLLRQALEKPGGLTREEAIRVIKDCLRV 170


>gi|225704572|gb|ACO08132.1| Proteasome subunit beta type 4 precursor [Oncorhynchus mykiss]
          Length = 256

 Score = 61.5 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+  G V+IA D   S G      N  ++ ++    I+      +   +     
Sbjct: 45  GTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGDYADYQYMKQII 104

Query: 75  LEKKLEQYPNQLLRSSVELAKD--------WRMDKYLRNLEAMILIA-DKTITLVITGMG 125
            +  +++       S    A           R  K       +++       + +     
Sbjct: 105 EQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNDESFLDYVDK 164

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICVYTNHNI 180
             +  E   +A G G   A    R ++      T++ A  +    + +       + +  
Sbjct: 165 LGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIEHCLKVLYYRDARSYNRH 224

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 225 EIAIVTKE 232


>gi|332016307|gb|EGI57220.1| Proteasome subunit alpha type-5 [Acromyrmex echinatior]
          Length = 242

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    +      K+  + K    A  +G  AD+ T+++R
Sbjct: 34  GSTAIGIATTEGVVLAVEKRITS-TLMEPTTVEKIVEIDKHIGCAA-SGLMADSRTMIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     +L A  D+   
Sbjct: 92  ARVECQNHWFVYNEKMTVESTAQAVSNLAIQFGDSDDDGTAMSRPFGVAMLFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A    + +     + +E  + A++I
Sbjct: 152 QLYHMDPSGTFVQFDAKAIGSGSEGAQQNLQEVYHKSMTLKEALKAALTI 201


>gi|242247664|ref|NP_001156219.1| proteasome subunit N3-like [Acyrthosiphon pisum]
 gi|328699540|ref|XP_003240966.1| PREDICTED: proteasome subunit beta type-4-like [Acyrthosiphon
           pisum]
 gi|239788332|dbj|BAH70854.1| ACYPI006743 [Acyrthosiphon pisum]
          Length = 252

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 31/200 (15%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T++L V  +  V +A D   S G      N  ++  + +  I+A  AG  +D   + + +
Sbjct: 38  TSVLGVVFESGVALAADTLTSYGSMACFQNNPRILTVNQNIIVAA-AGEYSDYQFIRDVV 96

Query: 76  EKKLE-QYPNQLLRSSVELAKD--------WRMDKYLRNLEAMILIA-DKTITLVITGMG 125
           E+K+  +       S    A           R  K        ++      +  +     
Sbjct: 97  EEKVRTEKSLNDGISMKPKALHTWLSRVLYNRRTKMKPLWSTFLVAGIQNDVPFLGEIDK 156

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS----------TQNSAEEIARKAMSIAADIC-- 173
                 +  +A G G   AL   R  +           T++ A ++ +K M +       
Sbjct: 157 LGTAFADEQIASGYGAYLALPLMRKAIDEKREKFNSKLTKDEAIDLLKKCMEVLYYRDAR 216

Query: 174 --------VYTNHNIVLETL 185
                   + T  ++ ++ L
Sbjct: 217 SHDKYQIGIVTKDSVEVQNL 236


>gi|71414883|ref|XP_809527.1| proteasome beta 7 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70873924|gb|EAN87676.1| proteasome beta 7 subunit, putative [Trypanosoma cruzi]
          Length = 218

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 56/168 (33%), Gaps = 15/168 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ V+ +G V++A D  +S G      N  +++ +G   ++    G  AD   +   
Sbjct: 4   GGSVIGVKYNGGVLLACDTLLSYGSLAKWPNIPRMKLVGAYTVMCA-TGDYADFQEMTTM 62

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRN---------LEAMILIADKTITLVITGMG 125
           +E  + +       +         + +++ +            ++         +     
Sbjct: 63  IENHVNRQQMYGGGALTPNEVFCYLQRHVYHKRSQFEPCLCRFVVAGCHGGEPFLGGVDD 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
                 +  +A G G   AL   R  +      T+  A  + +  + +
Sbjct: 123 VGTRWTDDCVAAGYGAYIALPLLRQALEKPGGLTREEAIRVIKDCLRV 170


>gi|332017895|gb|EGI58555.1| Proteasome subunit beta type-2 [Acromyrmex echinatior]
          Length = 207

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +    VMK++  K+ ++    ++A  +G S D     E + K 
Sbjct: 5   IGIQCKDFVLVAADMTTTQSIIVMKSDEHKIHKISDKLVMA-ISGESGDTTQFSEYIGKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIA------DKTITLVITGMGDVL 128
           ++ Y  +        A      +    YLR+     +        D     +        
Sbjct: 64  IQLYKMRNGYELSPKAAACFTRRNLADYLRSRTPYFVNMLLAGYDDDLGAELYFIDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +      G GG +++S          + EE
Sbjct: 124 CVKVPYATHGYGGMFSMSVLDRYHKYNCTEEE 155


>gi|168054345|ref|XP_001779592.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668990|gb|EDQ55586.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 250

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 49/166 (29%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A   + V     VV+A + +V+        +  K+ ++        AG    +      
Sbjct: 30  NAGAAIGVLAKDGVVLAAEKRVTSKLLATLKSTEKMYKIDDHVACAVAGIMADANILINT 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QL++S  +  + +     LR      L A         +  
Sbjct: 90  ARLSAQRYTLAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGYDKNFGFQLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        AIG+    A S  +       + E+  + A+ +
Sbjct: 150 SDPSGNYGGWKAGAIGANNQAAQSMLKQDYKDDMTREQAVQLALKV 195


>gi|13928866|ref|NP_113817.1| proteasome subunit beta type-4 [Rattus norvegicus]
 gi|310214|gb|AAA42054.1| proteasome RN3 subunit [Rattus norvegicus]
          Length = 232

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 62/176 (35%), Gaps = 17/176 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ D  VVIA D   S G         ++ R+    ++ G +G  AD
Sbjct: 15  QNPM-LTGTSVLGVKFDCGVVIAADMLGSYGSLARFRIISRIMRVNDSTML-GASGDYAD 72

Query: 68  AFTLLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
              L + L + +   E + +    S   +        Y R  +   L   K I     G 
Sbjct: 73  FQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTKVIGGYAGGE 132

Query: 125 GDVLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
             +          E   +A G G   A    R ++      +Q  A E+  + M +
Sbjct: 133 SFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 188


>gi|70951412|ref|XP_744948.1| proteasome beta-subunit [Plasmodium chabaudi chabaudi]
 gi|56525107|emb|CAH77641.1| proteasome beta-subunit, putative [Plasmodium chabaudi chabaudi]
          Length = 256

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 40/185 (21%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    ++IA D + S G      N +++ ++     +  F+G  ADA  L E 
Sbjct: 9   GTSVIALKYRNGIMIAADKKASYGSYAKFQNVQRIFKI-SNKTVMSFSGELADAQYLHEL 67

Query: 75  L-----------EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------- 113
           L           + K + +  +   S V      R +K       +I+            
Sbjct: 68  LTRVNVNDVVEKKSKYDLHDTKYYHSYVSRLFYNRKNKLDPLFNNIIIAGLNSQEYDDND 127

Query: 114 ------------------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                             DK    +        +     +  G    +AL+  R      
Sbjct: 128 KDILLYSEKQNNEEYKDIDKKDLYIGFVDMHGTQFCEDYITTGYARYFALTLLRNHYRDN 187

Query: 156 NSAEE 160
            + +E
Sbjct: 188 MTEDE 192


>gi|66823171|ref|XP_644940.1| proteasome subunit alpha type 7 [Dictyostelium discoideum AX4]
 gi|464459|sp|P34120|PSA7_DICDI RecName: Full=Proteasome subunit alpha type-7; AltName:
           Full=Proteasome component DD5
 gi|347511|gb|AAA33234.1| proteasome [Dictyostelium discoideum]
 gi|60473105|gb|EAL71053.1| proteasome subunit alpha type 7 [Dictyostelium discoideum AX4]
          Length = 250

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 17/189 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR   V+V+  + + +        + RK+ +L     +  FAG +AD+  L+ 
Sbjct: 31  KGTVAVGVRGKDVIVLGVEKKATAKLQDA-RSIRKIVKLDDHICL-TFAGLTADSRVLIS 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           +   + + Y   +  S         +A   +       +    +              + 
Sbjct: 89  KALMECQSYRLTVEDSPSVEYISKFIAGIQQRYTQSGGVRPFGISTLIVGFDTDGTPNLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-NI 180
                         AIG               T  S EE  + A+    +I V + + NI
Sbjct: 149 QTDPSGSYSSWKAAAIGRSSKSVGEFLEKNY-TDVSEEESIKLAVRALLEI-VESGNKNI 206

Query: 181 VLETLKVGD 189
            +  ++   
Sbjct: 207 EIAVIRNKQ 215


>gi|259482727|tpe|CBF77481.1| TPA: 20S proteasome beta-type subunit (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 203

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 47/153 (30%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V++A       G T++KA   K R+L +  ++A F+G + D     E ++  
Sbjct: 5   LGITGRDFVILAASKAAMRGPTILKAEDDKTRQLNEHTLVA-FSGEAGDTVQFAEYVQAN 63

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
           ++ Y  +        A               +    +  ++   D       +       
Sbjct: 64  VQLYTMRNDTELSPNAVANFVRGELARSLRSRNPYTVNLLLGGVDPISQKPHLYWIDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          + E+
Sbjct: 124 SLASVPYAAHGYAQYYCLSTLDKHHHPDITLEQ 156


>gi|325185909|emb|CCA20413.1| proteasome subunit alpha type5 putative [Albugo laibachii Nc14]
          Length = 244

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 24/175 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +R     V+A + +++    +   +  KV  + +  + A  +G ++DA  L++ 
Sbjct: 34  GTTAIGIRTKEGAVLAVEKRLTS-PLLEPESIEKVMEIDRH-VGAAMSGITSDAQILIDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAK-----------------DWRMDKYLRNLEAMILIA--DK 115
              +   +           A                  +    K  R     +L+A  D+
Sbjct: 92  ARVEATNHWFSYNDKMRVQALTQAICDLAMSFGEGQDENKHKQKMSRPFGVALLVAGVDE 151

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
               +       L       AIGSG   A +  +   S       AE +A  A+ 
Sbjct: 152 EGPHLFYSEPSGLYFPVQAHAIGSGAEGASTNLKEGYSEDMTLQDAENLAMGALK 206


>gi|256085175|ref|XP_002578798.1| proteasome subunit alpha 7 (T01 family) [Schistosoma mansoni]
 gi|238664184|emb|CAZ35036.1| proteasome subunit alpha 7 (T01 family) [Schistosoma mansoni]
          Length = 264

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + +          RK+  L     +A FAG +ADA  L+ 
Sbjct: 30  KGSTAIGVRGKDCVVLCVEKKATTKLQ-NDRTVRKIALLDDHVAVA-FAGLTADARILIS 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------------MILIADKTITLVI 121
           R+  + + Y   +            M +  +                +          + 
Sbjct: 88  RIRVECKSYKLTVEDPVSLEYIARYMAQLKQKYTQSNGRRPFGVSTLICGFNQDGTPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAM 166
                    E    AIG     A        +    A+E     +A KA+
Sbjct: 148 QTDPSGTHFEWLANAIGKNAKVAREFLEKNYTEDAVADEYGTVKLAVKAL 197


>gi|156095149|ref|XP_001613610.1| proteasome subunit alpha type 7-2 [Plasmodium vivax SaI-1]
 gi|148802484|gb|EDL43883.1| proteasome subunit alpha type 7-2, putative [Plasmodium vivax]
          Length = 256

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 24/197 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  +  V++A + ++     + K +  K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAVGICVNDGVILASERRI-ASALIEKDSVEKLLPIDDHIGCA-MSGLMADARTLIDY 91

Query: 75  LEKKLEQYPNQLLRSS----------------VELAKDWRMDKYLRNLEAMILIA--DKT 116
              +   Y      +                   L+ + R     R     +LI   DK 
Sbjct: 92  ARVECNHYKFIYNENINIKSCVELISELALDFSNLSDNKRKKIMSRPFGVALLIGGVDKN 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
              +               +IGS    A    +   +   + EE   +A   +    +  
Sbjct: 152 GPCLWYTEPSGTNTRFLAASIGSAQEGAELLLQENYNKDMTFEEAEILALTVLRQVME-D 210

Query: 174 VYTNHNIVLETLKVGDE 190
             ++ N+ +  +K  D+
Sbjct: 211 KLSSSNVEIAAVKKSDQ 227


>gi|212537603|ref|XP_002148957.1| proteasome component Pre1, putative [Penicillium marneffei ATCC
           18224]
 gi|210068699|gb|EEA22790.1| proteasome component Pre1, putative [Penicillium marneffei ATCC
           18224]
          Length = 203

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 44/153 (28%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V+IA       G TV+KA   K R L   + +  F+G   D     E ++  
Sbjct: 5   LGITGKDFVIIAASKAAMRGPTVLKATDDKTRNL-NQHTLMAFSGEPGDGVQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELA-----------KDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           ++ Y  +        A                + Y  NL    + A      +       
Sbjct: 64  VQLYSMRNDTELSPAAVGNFVRGELARALRSRNPYTVNLLLGGVDAITNTPSLYWVDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              E    A G    Y LS            E+
Sbjct: 124 SLAEVPYAAHGYAQYYCLSILDKHHHPDIDLEQ 156


>gi|65024|emb|CAA44593.1| proteasome beta subunit [Xenopus laevis]
          Length = 215

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 16/169 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+ DG V+IA D   S G      N  ++ ++ +  I+ G +G  AD   L + 
Sbjct: 4   GTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTIL-GASGDYADYQYLKQV 62

Query: 75  LEKKL--EQYPNQLLRSSVELAKDWRMD-KYLRNLEAMILIADKTITLVITGMGDVLEP- 130
           +++ +  E+        S +    W     Y R  +   L     I     G   +    
Sbjct: 63  IDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYVD 122

Query: 131 ------ENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSI 168
                 E   +A G G   A    R +   + +     A ++  + M +
Sbjct: 123 KLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKV 171


>gi|168041029|ref|XP_001772995.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675728|gb|EDQ62220.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 250

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 49/166 (29%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A   + V     VV+A + +V+        +  K+ ++        AG    +      
Sbjct: 30  NAGAAIGVLAKDGVVLAAEKRVTSKLLATLKSTEKMYKIDDHVACAVAGIMADANILINT 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QL++S  +  + +     LR      L A         +  
Sbjct: 90  ARLSAQRYTLAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGYDKNFGFQLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        AIG+    A S  +       S E+  + A+ +
Sbjct: 150 SDPSGNYGGWKAGAIGANNQAAQSMLKQDYKDDMSREQAVQLALKV 195


>gi|209737686|gb|ACI69712.1| Proteasome subunit beta type-2 [Salmo salar]
          Length = 208

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 11/154 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L    ++    G + D     E ++K 
Sbjct: 5   IGIQGQDFVLVAADNIAANSIIQMKQDQDKMFKLSDKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  IQLYKMRNGYELSPKAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G    LS          + +E  
Sbjct: 124 LAKAPFAAHGYGAYLTLSILDRYYRPDLTRDEAV 157


>gi|145256902|ref|XP_001401555.1| proteasome subunit beta type-2 [Aspergillus niger CBS 513.88]
 gi|134058465|emb|CAL00674.1| unnamed protein product [Aspergillus niger]
          Length = 203

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V++A       G T++KA   K ++L + N +  F+G + D     E ++  
Sbjct: 5   LGITGKDFVILAASKAAMRGPTILKAEDDKTKQLNEHN-LMAFSGEAGDTVQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
           ++ Y  +        A               +    +  ++   D       +       
Sbjct: 64  IQLYTMRNDTELGPSAVASFVRGEMARSLRSRNPYTVNLLLGGVDPITQKPHLYWIDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          S EE
Sbjct: 124 SLAPVPYAAHGYAQYYCLSTLDKHHHPDISLEE 156


>gi|115976544|ref|XP_001190137.1| PREDICTED: similar to proteasome-like protein, partial
           [Strongylocentrotus purpuratus]
          Length = 140

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 33/128 (25%), Gaps = 18/128 (14%)

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPEN 132
           + ++ +    S+  +A       Y R               ++    V +          
Sbjct: 1   MYEHEHHKKMSTTAIAAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSFDPVGSYERE 60

Query: 133 GVMAIGSGGSYALSAARALMS------------TQNSAEEIARKAMSIAADICVYTNHNI 180
              A GS  +         +               + A  + +     AA+  +YT   I
Sbjct: 61  TYRAAGSSSALLQPLLDNQIGGKNQEGWVKEPIPVDKAVALVKDVFISAAERDIYTGDGI 120

Query: 181 VLETLKVG 188
           VL  L   
Sbjct: 121 VLHVLTKD 128


>gi|223646934|gb|ACN10225.1| Proteasome subunit beta type-2 [Salmo salar]
 gi|223672797|gb|ACN12580.1| Proteasome subunit beta type-2 [Salmo salar]
          Length = 208

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 11/154 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L    ++    G + D     E ++K 
Sbjct: 5   IGIQGQDFVLVAADNIAANSIIQMKQDQDKMFKLSDKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  IQLYKMRNGYELSPKAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G    LS          + +E  
Sbjct: 124 LAKAPFAAHGYGAYLTLSILDRYYRPDLTRDEAV 157


>gi|237834583|ref|XP_002366589.1| proteasome subunit alpha type 4, subunit [Toxoplasma gondii ME49]
 gi|211964253|gb|EEA99448.1| proteasome subunit alpha type 4, subunit [Toxoplasma gondii ME49]
 gi|221486124|gb|EEE24394.1| proteasome subunit alpha type 4, subunit, putative [Toxoplasma
           gondii GT1]
 gi|221503621|gb|EEE29312.1| proteasome subunit alpha type 4, subunit, putative [Toxoplasma
           gondii VEG]
          Length = 252

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 55/189 (29%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A++ L +     VV+A D  V+           K+ ++    + A    ++     + +
Sbjct: 30  NASSTLGILATDGVVLAADKMVTSKLLDQGRTKEKIYKVDDHVMCAVAGLTADANILINQ 89

Query: 74  -RLEKKLEQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
            RL  +   Y     +          ++ + +     LR      L A         +  
Sbjct: 90  ARLTGQRYLYAYDEPQPIEQLVLQICDVKQSYTQFGGLRPFGVSFLFAGWDRHYGFQLYH 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHN 179
                        AIG     A S  +           A  +A K ++   D    T   
Sbjct: 150 TDPSGNYSGWKATAIGVNSQSAQSILKQEWKEDLDVDGALLLAAKVLNKTMDTAAPTADK 209

Query: 180 IVLETLKVG 188
           + +  ++  
Sbjct: 210 LEIAIVRKD 218


>gi|322799258|gb|EFZ20649.1| hypothetical protein SINV_00130 [Solenopsis invicta]
          Length = 242

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 57/170 (33%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    +      K+  + +    A  +G  AD+ T+++R
Sbjct: 34  GSTAIGIATTEGVVLAVEKRITS-TLMEPTTVEKIVEIDRHIGCAA-SGLMADSRTMIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     +L A  D+   
Sbjct: 92  ARVECQNHWFVYNERMTVESTAQAVSNLAIQFGDSDDDGTAMSRPFGVAMLFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A    + +     + +E  + A++I
Sbjct: 152 QLYHMDPSGTFVQFDAKAIGSGSEGAQQNLQEVYHKSMTLKEALKTALTI 201


>gi|209732122|gb|ACI66930.1| Proteasome subunit beta type-4 precursor [Salmo salar]
          Length = 256

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 61/194 (31%), Gaps = 15/194 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++    I+      +   
Sbjct: 40  NPM-VTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDTTILGASGDYADYQ 98

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGD 126
           +      +  +++       S    A    + +  Y R  +   L     +     G   
Sbjct: 99  YMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVVGGFYNGESF 158

Query: 127 VLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICV 174
           +          E   +A G G   A    R ++      T++ A  +  + + +      
Sbjct: 159 LGYVDKLGVAYEAPTVATGFGAYLAQPPMREVVENKVEITKDEARALIDRCLKVLYYRDA 218

Query: 175 YTNHNIVLETLKVG 188
            + +   +  +   
Sbjct: 219 RSYNRHEIAIVTEE 232


>gi|307209861|gb|EFN86640.1| Proteasome subunit alpha type-5 [Harpegnathos saltator]
          Length = 242

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    +      K+  + K    A  +G  AD+ T+++R
Sbjct: 34  GSTAIGIATTEGVVLAVEKRITS-TLMEPTTVEKIVEIDKHIGCAA-SGLMADSRTMIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     +L A  D+   
Sbjct: 92  ARVECQNHWFVYNEKMTVESTAQAVSNLAIQFGDSDDDGTAMSRPFGVAMLFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A    + +     + +E  + A++I
Sbjct: 152 QLYHMDPSGTFVQFDAKAIGSGSEGAQQNLQEVYHKSMTLKEALKSALTI 201


>gi|318103394|ref|NP_001188165.1| proteasome subunit beta type-2 [Ictalurus punctatus]
 gi|308322043|gb|ADO28159.1| proteasome subunit beta type-2 [Ictalurus furcatus]
 gi|308323629|gb|ADO28950.1| proteasome subunit beta type-2 [Ictalurus punctatus]
          Length = 199

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 53/162 (32%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L +  ++    G + D     E ++K 
Sbjct: 5   IGIQGQDFVLVAADNVAASSIIKMKHDYDKMFKLSEKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDEADGPALYYMDYMSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A ++ +K + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSIMDRYYRPDLTREEALDLLKKCIE 165


>gi|255950050|ref|XP_002565792.1| Pc22g18890 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592809|emb|CAP99177.1| Pc22g18890 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 203

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 44/153 (28%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V++A       G TV+KA   K R+L K  ++A F+G S D     E ++  
Sbjct: 5   LGIAGKDFVILAASKAAMRGPTVLKAEDDKTRQLNKHTVMA-FSGESGDTVQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELAKDW-----------RMDKYLRNLEAMILIADKTITLVITGMGDV 127
              Y  +        A                  Y  NL    +        +       
Sbjct: 64  AALYSMRNDTELSPSAVANFVRGELARSLRSRSPYTVNLLLGGIDPVTEKPHLYWVDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          S EE
Sbjct: 124 SLAPLPYAAHGYAQYYCLSILDKHHHPDCSLEE 156


>gi|168000352|ref|XP_001752880.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696043|gb|EDQ82384.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 224

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 55/165 (33%), Gaps = 14/165 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L +  +G V+IA D   S G T    +  +++ +    ++ G +G  +D   + + 
Sbjct: 9   GTSVLGLIYEGGVLIAADTAGSYGSTTRFKSVERMKAVSNNTLL-GASGEISDFQAITQL 67

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTITLVITGM 124
           L    +             L     + + +              ++      +  + +  
Sbjct: 68  LDRLIVADAMWDDGNDLGPLDIHNYLTRVMYNRRNKFDPLWNTLILGGVKNGVKHLGSVS 127

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
              +   +  +A G G   A    R       + EE   +  KA+
Sbjct: 128 MIGVHYVDNHIATGFGIHLAQPIFREEWKENMTLEEGTRLLEKAL 172


>gi|145545111|ref|XP_001458240.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426059|emb|CAK90843.1| unnamed protein product [Paramecium tetraurelia]
          Length = 236

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 57/167 (34%), Gaps = 14/167 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ +  +G V++  D   S G      N +K+ ++ K  I A  +G  +D   +++ 
Sbjct: 21  GGSVIALVYNGGVIVGTDTLCSYGSMAAFKNVQKIAQISKNTIYA-SSGEYSDFQQVVKE 79

Query: 75  LEKKLE---QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG-------M 124
           L K      QY + +  S  +         Y +  +   L     I     G        
Sbjct: 80  LAKIDRSALQYDDGVHPSPKDYGNFLARLSYKKRCKINPLYLQNVIAGFHNGERYLGLID 139

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSI 168
                 E+  +  G    +  +      +     + A+++ R+   +
Sbjct: 140 IYGTYLESNFITTGFASYFCKAIISNYWNENCTLDQAKQVIRECFKV 186


>gi|326933508|ref|XP_003212845.1| PREDICTED: proteasome subunit beta type-4-like [Meleagris
           gallopavo]
          Length = 215

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 16/169 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             ++L V+ +G VVIA D   S G      +  ++ R+    ++ G +G  AD   L + 
Sbjct: 4   GASVLGVKFEGGVVIAADMMGSYGSLARFRSISRLLRVNDSTVL-GASGDYADFQYLTQV 62

Query: 75  L-EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGDVLEP- 130
           + +  +++       S    A    + +  Y R  +   L     I     G   +    
Sbjct: 63  INQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKINPLWNTVVIGGFYNGESFLGYVD 122

Query: 131 ------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSI 168
                 E   +A G G   A    R  +      T+  A ++  + M I
Sbjct: 123 MLGVAYEAPTLATGYGAYLAQPLMRETLEKKPSLTKEEARDLIERCMKI 171


>gi|298710464|emb|CBJ25528.1| proteasome subunit alpha type 7 [Ectocarpus siliculosus]
          Length = 251

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 53/169 (31%), Gaps = 18/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             ++++ V+    VV+  + + +          RK+ ++     +A FAG +ADA  L++
Sbjct: 30  RGSSVVCVKGKDCVVLGVERRATAKLQ-DPRTIRKIVKIDSHITLA-FAGLTADARVLVD 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK---------YLRNLEAMILIAD---KTITLVI 121
           +   + + Y      +         + +          +R      ++A         + 
Sbjct: 88  KARLECQSYRLTCEDAPSIEYVARFIARTQQRYTQRGGMRPFGVSSILAGFSQDGTPQIY 147

Query: 122 TGMGDVLEPENGV-MAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                            GS  +          +       A+++  KA+
Sbjct: 148 QTDPAGTYSAWKANAIGGSNSNNMREFLEKNWANDMDEGAAKKLCMKAL 196


>gi|170089715|ref|XP_001876080.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164649340|gb|EDR13582.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 194

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 15/186 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T   +   G V++A D   S    V         +    +++  ++G   D     E +E
Sbjct: 3   TSFAITGKGYVIVAADT-TSARSIVKMKIDEDKIKTLSPHLLMAYSGEPGDTVQFAEYVE 61

Query: 77  KKLEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMG 125
           + +  Y  + L      A                  Y  NL             +     
Sbjct: 62  RNIRLYQIRNLYPLRPSAAASWIRRALAESLRSRKPYSVNLLLGGYDTASHDPHLYWIDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IA--RKAMSIAADICVYTNHNIVL 182
                E    A G G  +ALS      + + + EE +A  ++ +   A   V +     +
Sbjct: 122 LGTMTEVPFAAHGYGSYFALSLLDRYHNPEATIEEGLATLKRCIDEVAKRLVVSPGKYKV 181

Query: 183 ETLKVG 188
           + +   
Sbjct: 182 KIVDQD 187


>gi|168039234|ref|XP_001772103.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676566|gb|EDQ63047.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 250

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 49/166 (29%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A   + V     VV+A + +V+        +  K+ ++        AG    +      
Sbjct: 30  NAGAAIGVLAKDGVVLAAEKRVTSKLLATLKSTEKMYKIDDHVACAVAGIMADANILINT 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QL++S  +  + +     LR      L A         +  
Sbjct: 90  ARLSAQRYTLAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGYDKNFGFQLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        AIG+    A S  +       + E+  + A+ +
Sbjct: 150 SDPSGNYGGWKAGAIGANNQAAQSMLKQDYKDDMTREQAVQLALKV 195


>gi|225712056|gb|ACO11874.1| Proteasome subunit beta type-4 precursor [Lepeophtheirus salmonis]
          Length = 270

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 9/148 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++  ++ D  V++  D  VS G+     N +++ ++ +  +I      +         
Sbjct: 38  GSSVFGIKYDEGVLMGADTLVSYGKMARYPNVQRLYKVNESTVITCTGDFADFQEITSML 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVITGMG 125
              ++E+   Q   +    +    + +YL                      +  +     
Sbjct: 98  ERMQIEEERTQNEVTMQPRSLHIYLTRYLYKKRTDFDPKWTNIVVGGMQDGVPYLGYINM 157

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS 153
             L      +  G GGS AL   R L  
Sbjct: 158 IGLAYTEDAVTTGLGGSIALPLMRKLKD 185


>gi|84490036|ref|YP_448268.1| proteasome subunit alpha [Methanosphaera stadtmanae DSM 3091]
 gi|84373355|gb|ABC57625.1| PsmA [Methanosphaera stadtmanae DSM 3091]
          Length = 287

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 25/194 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +     VV A D ++   + ++ ++  K+ ++    I    +G  ADA  L++
Sbjct: 34  RGTTSVGIISKEGVVFAVDKKIKS-KLIVPSSIEKIFKIDDH-IATASSGLVADARRLID 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------------- 119
               + +    Q             + KYL +LE M   +                    
Sbjct: 92  IARNQAQVNKLQYHEPITVTG----LAKYLGDLEQMYTQSGGVRPFGISLIIGGVSDGEC 147

Query: 120 -VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
            +          E    AIG G    L+          +   A ++A + + +A D  V 
Sbjct: 148 RIYETDPSGALVEYKATAIGLGRDKTLNLFEDKYEDDLTLDEAIDLAIEGIYVATDGKVA 207

Query: 176 TNHNIVLETLKVGD 189
            + +I +  ++  +
Sbjct: 208 -DDSIEISVIEKEN 220


>gi|226941102|ref|YP_002796176.1| ATP-dependent protease peptidase subunit [Laribacter hongkongensis
           HLHK9]
 gi|226716029|gb|ACO75167.1| ATP-dependent protease peptidase subunit [Laribacter hongkongensis
           HLHK9]
          Length = 190

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 60/175 (34%), Gaps = 14/175 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMK-----ANARKVRRLGKGNIIAGFAGSSADAFT 70
           TTI  V+K   V IA D Q + G T +       + +     G    I+G A        
Sbjct: 2   TTITVVKKGREVAIAADCQSTFGDTRLTATHDARSNKIFELDGSFFAISGSAAHDLVLQA 61

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVI 121
            L RL+ +       +  +  +L    + D +L              M ++      +  
Sbjct: 62  ALSRLKSRQFDSRPAIFETFRKLHPKLKDDFFLKTEEEEDDPYESSQMTVLIANPHGIFA 121

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
                 +   N   AIGSG  YA+ A  A       A EIA+  +    +  V T
Sbjct: 122 VYSMREVYEFNQFWAIGSGRDYAVGAMWAAWPHLEGAAEIAQLGVQAGCEFDVGT 176


>gi|47201790|emb|CAF87364.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 202

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 54/197 (27%), Gaps = 52/197 (26%)

Query: 16  TTILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           TTIL     G VVI  D + S+ G+ V      KV ++         AGS ADA  + + 
Sbjct: 1   TTILAATFSGGVVIGSDSRASMGGEYVSSKTINKVIKVHDRIFCC-MAGSLADAQAVTKA 59

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAM-------ILI 112
            + +L  + +   +   +                        +L +L A           
Sbjct: 60  AKFQLSFHRSHTSKPVFKQDNPALTLWSFCPLQHPDGDPPSGHLGSLCAERAVLPKQGGA 119

Query: 113 ADKTITLVITGMGDVLEPEN----------------------------GVMAIGSGGSYA 144
           A +     +   G     E                              V   GSG ++ 
Sbjct: 120 AGRLHHGWLGQQGRATGTEGLGTEAEPSHTFTVPQVYVVSLGGMLLRQPVTIGGSGSTFI 179

Query: 145 LSAARALMSTQNSAEEI 161
                A      S EE 
Sbjct: 180 YGYVDAKYKPNMSREEC 196


>gi|3114282|pdb|1RYP|N Chain N, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114296|pdb|1RYP|2 Chain 2, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513425|pdb|1G65|M Chain M, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513439|pdb|1G65|1 Chain 1, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|14488818|pdb|1FNT|N Chain N, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488832|pdb|1FNT|BB Chain b, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|20150389|pdb|1JD2|M Chain M, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150396|pdb|1JD2|T Chain T, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|75765712|pdb|1Z7Q|N Chain N, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765726|pdb|1Z7Q|BB Chain b, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|93279380|pdb|2F16|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279394|pdb|2F16|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279668|pdb|2FNY|M Chain M, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279682|pdb|2FNY|1 Chain 1, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032214|pdb|2FAK|M Chain M, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032228|pdb|2FAK|1 Chain 1, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490855|pdb|2GPL|M Chain M, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490869|pdb|2GPL|1 Chain 1, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016379|pdb|3D29|M Chain M, Proteasome Inhibition By Fellutamide B
 gi|190016393|pdb|3D29|1 Chain 1, Proteasome Inhibition By Fellutamide B
 gi|197725333|pdb|3E47|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725347|pdb|3E47|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939224|pdb|3DY3|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939238|pdb|3DY3|1 Chain 1, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939252|pdb|3DY4|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939266|pdb|3DY4|1 Chain 1, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828249|pdb|3GPJ|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828263|pdb|3GPJ|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588333|pdb|3GPT|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588347|pdb|3GPT|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588361|pdb|3GPW|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588375|pdb|3GPW|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588555|pdb|3HYE|M Chain M, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588569|pdb|3HYE|1 Chain 1, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|298508235|pdb|1VSY|N Chain N, Proteasome Activator Complex
 gi|298508249|pdb|1VSY|2 Chain 2, Proteasome Activator Complex
 gi|298508451|pdb|3L5Q|R Chain R, Proteasome Activator Complex
 gi|298508465|pdb|3L5Q|4 Chain 4, Proteasome Activator Complex
 gi|330689393|pdb|3MG4|M Chain M, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689407|pdb|3MG4|1 Chain 1, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 233

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 63/197 (31%), Gaps = 24/197 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++++++ D  V+IA D   S G  +      ++  +G   ++ G +G  +D   +   
Sbjct: 8   GTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVV-GISGDISDMQHIERL 66

Query: 75  LEKKLEQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           L+  + +       +          + +      Y R  +   L     +  V +     
Sbjct: 67  LKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQF 126

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN------------SAEEIARKAMSIAA----D 171
           L   N +    S  + A      + +               +  ++A +A+  A      
Sbjct: 127 LRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYY 186

Query: 172 ICVYTNHNIVLETLKVG 188
               ++ N  L  +   
Sbjct: 187 RDARSSRNFSLAIIDKN 203


>gi|325969159|ref|YP_004245351.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
 gi|323708362|gb|ADY01849.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
          Length = 246

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 16/167 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + ++    VV+A + +  +   +   +  KV  +     IA  +G  +DA  L+E
Sbjct: 34  RGWATIGIKCVDGVVLAAEKR-KVSSLIDLGSIEKVYMVDDHVGIAA-SGLLSDARVLIE 91

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
              ++ + +            L +   +L +       +R   A +++   DK    +  
Sbjct: 92  YARQEAQTHRLLYDEPIDVELLTKRISDLKQMHTQYGGVRPFGAALIVGGVDKHGPRLFQ 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
                +      +A+G+  S                    ++A +A+
Sbjct: 152 TDPGGIYFGFYAVAMGAESSRITEFLEKEYKYDMGVNDCVKLAIRAL 198


>gi|289741375|gb|ADD19435.1| 20S proteasome regulatory subunit alpha type PSMA7/PRE6 [Glossina
           morsitans morsitans]
          Length = 248

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 66/193 (34%), Gaps = 24/193 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ Q   +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 29  KGSTAVGVRGANCVVLGVEKR-SVAQLQEERTVRKICALDDH-VVMAFAGLTADARVLIN 86

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R   +L + +      R      LI        + + 
Sbjct: 87  RAQVECQSHKLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDYDGTSHLY 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAMSIAADICVYT 176
                 +  E    A G              + +  AEE     +A KA+   A     T
Sbjct: 147 QTEPSGIYYEWKANATGRSFKTVREFLEKHYTDEEVAEEKGAVKLAIKALLEVAQ----T 202

Query: 177 NH-NIVLETLKVG 188
              N+ +  ++  
Sbjct: 203 GQKNLEIAVMEKN 215


>gi|330793877|ref|XP_003285008.1| hypothetical protein DICPUDRAFT_75973 [Dictyostelium purpureum]
 gi|325085035|gb|EGC38450.1| hypothetical protein DICPUDRAFT_75973 [Dictyostelium purpureum]
          Length = 263

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 61/185 (32%), Gaps = 16/185 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+I+ ++ D  VV+  D  +S G      + +++ + G   II G +G  +D  ++   
Sbjct: 48  GTSIIAIKYDKGVVMGSDMLLSYGSLARFNSIQRMTKFGGNTII-GASGEYSDFQSITTT 106

Query: 75  LEKKL-EQYPNQLLRSSVELAKDWRMDKYLR--NLEAMILIA-------DKTITLVITGM 124
           L + + + +                + + L     +   L             + +    
Sbjct: 107 LNELVTDDHCMDDGSRLSPEEIWNYLARILYNQRNKGNPLWNTCVVIGYQGGKSFLGKVD 166

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALM--STQNS---AEEIARKAMSIAADICVYTNHN 179
                 +  ++  G G   AL   R     +   +   A+++    + +       ++  
Sbjct: 167 LVGTCFKEDIVTCGYGSHIALPLLRKARDDNPNMNLEQAKKLIEDCLRVLFYRDARSSKK 226

Query: 180 IVLET 184
           I +  
Sbjct: 227 IQIAV 231


>gi|124486159|ref|YP_001030775.1| proteasome subunit alpha [Methanocorpusculum labreanum Z]
 gi|124363700|gb|ABN07508.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
          Length = 272

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 54/175 (30%), Gaps = 18/175 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
             TT + ++    VV+  D +V+  + +  ++  K+ R+ +   +A  G  G +      
Sbjct: 36  RGTTAVGIKCKTGVVLLVDKRVNS-RLLEPSSIEKIFRIDEHIGVASSGLVGDARILVDR 94

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIADKT------ITL 119
                +       +      L +   +  + + +    R     +LIA            
Sbjct: 95  ARIEAQINRVSYGEPVDVETLAKKLCDHMQSYTLFGGARPYGTALLIAGAESSPTGTKYH 154

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAAD 171
           +          E     IG G    +           SAEE      KA+  A +
Sbjct: 155 LFETDPSGTLLEYSATGIGIGRPAVIKLFEQEYKETCSAEEAVLLGLKALHTATE 209


>gi|327400935|ref|YP_004341774.1| Proteasome subunit alpha [Archaeoglobus veneficus SNP6]
 gi|327316443|gb|AEA47059.1| Proteasome subunit alpha [Archaeoglobus veneficus SNP6]
          Length = 247

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 51/170 (30%), Gaps = 13/170 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    V++  D +V   + +      K+ ++ +    A     +     +  
Sbjct: 33  RGATAIGIKTKEGVLLLADRRV-ASKLLEITTIEKIYKIDEHICAATSGLVADARVLIDR 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA--------MILIADKTITLVITGM 124
            R+E ++ +       S  ELA+     K               +++        +    
Sbjct: 92  ARIEAQINKLTYDEPISVKELARRICDFKQQYTQYGGVRPFGVSLLIAGVDETPKLYETD 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
                 E    +IG+G +  +               A  +A  AM  A +
Sbjct: 152 PSGALLEYKATSIGAGRNIVVEYLEKEYKEDMALEDAIILAMVAMGKAIE 201


>gi|156082185|ref|XP_001608581.1| proteasome beta-subunit type 4 [Plasmodium vivax SaI-1]
 gi|148801520|gb|EDL42919.1| proteasome beta-subunit type 4, putative [Plasmodium vivax]
          Length = 256

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 66/216 (30%), Gaps = 43/216 (19%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    ++IA D + S G      N  ++ ++     +  F+G  ADA  L E 
Sbjct: 9   GTSVIALKYKHGILIAADKKASYGSYAKFQNVERIFKV-NNKTVMSFSGELADAQYLHET 67

Query: 75  L-----------EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------- 113
           L           + K + + ++   + V      R +K       +I+            
Sbjct: 68  LTRVNVNNVMDKKSKYDLHNSKYYHAYVGRLFYNRKNKIDPLFNTIIVAGLNSQEYDDND 127

Query: 114 ------------------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                             +K    +        +     M  G    +AL+  R      
Sbjct: 128 KDVLLYTGKHTTDEYKEINKEDLYIGFVDMHGTQFAGDYMTTGYARYFALTLLRERYKDY 187

Query: 156 NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
            + EE   +  + + +        ++ I +  +   
Sbjct: 188 MTEEEAKTLLNECLRVLFYRDATASNKIQIVKITSK 223


>gi|257053724|ref|YP_003131557.1| proteasome subunit alpha [Halorhabdus utahensis DSM 12940]
 gi|256692487|gb|ACV12824.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
          Length = 245

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 11/168 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL- 72
             +  + VR D  VV+A D Q +    + + +  K  ++     IA     +     +  
Sbjct: 35  RGSASVGVRTDEGVVLAADRQ-TRSSLIERDSIEKTHKIDDHIAIASAGHVADARKLIDF 93

Query: 73  -------ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVITG 123
                  ERL          L ++  +  +++      R     +++         +   
Sbjct: 94  ARRRAQVERLRYDQPMGVEALTKAITDTIQEYTQTGGARPFGVSLIVGGMENGEPRLFET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
                  E   +A+G G                + E+    A+   A+
Sbjct: 154 DPSGTPYEWSALAVGGGREEIQEYFEDNYEDGMTLEQGVGLALEGLAE 201


>gi|209737634|gb|ACI69686.1| Proteasome subunit beta type-4 precursor [Salmo salar]
          Length = 256

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 61/194 (31%), Gaps = 15/194 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D   S G      N  ++ ++    I+      +   
Sbjct: 40  NPM-VTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDTTILGASGDYADYQ 98

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGD 126
           +      +  +++       S    A    + +  Y R  +   L     +     G   
Sbjct: 99  YMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVVGGFYNGESF 158

Query: 127 VLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICV 174
           +          E   +A G G   A    R ++      T++ A  +  + + +      
Sbjct: 159 LGYVDKLGVAYEAPTVAAGFGAYLAQPLMREVVENKVEITKDEARALIDRCLKVLYYRDA 218

Query: 175 YTNHNIVLETLKVG 188
            + +   +  +   
Sbjct: 219 RSYNRHEIAIVTEE 232


>gi|332847903|ref|XP_511441.3| PREDICTED: proteasome subunit beta type-3-like [Pan troglodytes]
          Length = 169

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 1/110 (0%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 2   SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
            T+ +RL+ +L  Y  +  R          +   L               
Sbjct: 61  QTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRXXXXXXXXXDP 110


>gi|294955778|ref|XP_002788675.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|239904216|gb|EER20471.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
          Length = 245

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 25/172 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
             TT + VR     V+A + +      + K       RK+ ++ +  ++A FAG +ADA 
Sbjct: 29  KGTTAVGVRGKDTAVLAVERKA-----IPKLQDPRTVRKILKIDQHVMLA-FAGLNADAR 82

Query: 70  TLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMIL------IADKTI 117
            L  +   + + Y   +         +  +A   +   Y        +        +   
Sbjct: 83  VLANKARVECQSYRLNVEDQPTVDYVARYIAGVQQQYTYKGGARPFGISTLIIGQNELKK 142

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
             +               AIG                        E+A +A+
Sbjct: 143 PQLYQTDPSGSFNSWKAAAIGRNSKTVSDYLEKNYKEDMAEQETIEMAVRAL 194


>gi|116778764|gb|ABK20984.1| unknown [Picea sitchensis]
          Length = 237

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 65/185 (35%), Gaps = 20/185 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    +++A + +++    +  ++  K+  + +  +    +G  ADA TL+E 
Sbjct: 34  GSTAVGLKTKRGIILAVEKRITS-PLLEPSSVEKIMEIDEH-VGCAMSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM------------DKYLRNLEAMILIA--DKTITLV 120
              + + +           +    +            D   R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMSTESTTQALCDLALRFGEGDEDSMSRPFGVSLLIAGHDENGPCL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    +IGSG   A  A +       +   AE +A   +    +    T 
Sbjct: 152 YYTDPSGTFWQCDAKSIGSGVEAADIALKEQYRKDMTLEEAETLALSILKQVME-DKVTA 210

Query: 178 HNIVL 182
           +N+ +
Sbjct: 211 NNVDI 215


>gi|125554282|gb|EAY99887.1| hypothetical protein OsI_21882 [Oryza sativa Indica Group]
          Length = 226

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A + L V     VV+ G+ +V+        +A K+ ++       +AG    +      
Sbjct: 6   NAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNT 65

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QL++S  +  + +     LR      L A         +  
Sbjct: 66  ARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYM 125

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A+G+    A S  +       + EE    A+ +
Sbjct: 126 SDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKV 171


>gi|154151363|ref|YP_001404981.1| proteasome subunit alpha [Candidatus Methanoregula boonei 6A8]
 gi|166199284|sp|A7I9C7|PSA_METB6 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|153999915|gb|ABS56338.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
          Length = 240

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 16/172 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    VV+  D +VS  + +  ++  K+ ++ +   +A  +G   DA  L++
Sbjct: 34  RGTTAVGIKAHDGVVLIVDKRVSS-KLLESSSIEKIFKIDEHIGVA-SSGLVGDARALVD 91

Query: 74  RLEKKL---------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--KTITLVIT 122
           R   +                L +   +  +       +R     +LIA      + +  
Sbjct: 92  RARIECQINRVSYDERIEVEALAKKLCDHMQTLTQYGGIRPYGTALLIAGVSDGESRLFE 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
                   E     IG G   A+       +       A  +  KA+  A +
Sbjct: 152 TDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADLALKDAILLGLKALHSATE 203


>gi|255637272|gb|ACU18966.1| unknown [Glycine max]
          Length = 250

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 19/190 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A T + +     VV+ G+ +V+        +  K+ ++       +AG    +      
Sbjct: 30  NAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVTCAVAGIMSDTNILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   Y  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH--N 179
           T             AIG+    A S  +       + EE  + A+ + +     T    +
Sbjct: 149 TSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDITREEAVQLALKVLSK----TMDSTS 204

Query: 180 IVLETLKVGD 189
              E L++ +
Sbjct: 205 FTFEKLELAE 214


>gi|332372913|gb|AEE61598.1| unknown [Dendroctonus ponderosae]
          Length = 257

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 59/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  +  VV+A + +++    +      K+  + K    A  +G  AD+ T++ER
Sbjct: 34  GSTAIGISTNQGVVLAVEKRITS-NLMEPTTIEKIVEVDKHIGCA-VSGLIADSRTMIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     IL A  D+   
Sbjct: 92  ARMECQNHWFVYNENMSVESCAQAVSNLAIQFGDSDDDGAAMSRPFGVAILFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A  + + +     + +E    A++I
Sbjct: 152 QLYHMDPSGTFVQFDAKAIGSGSEGAQQSLQEVYHRSMTLDEATTSALTI 201


>gi|257386104|ref|YP_003175877.1| proteasome subunit alpha [Halomicrobium mukohataei DSM 12286]
 gi|257168411|gb|ACV46170.1| Proteasome endopeptidase complex [Halomicrobium mukohataei DSM
           12286]
          Length = 247

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 59/191 (30%), Gaps = 17/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR    VV+A D        + + +  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGTASVGVRTADGVVLAADRHA-RSPLLERDSIEKIHKADDHVGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVIT 122
              ++ +    +         L +   +  + +      R     +L+         +  
Sbjct: 93  LARRQAQVNHLRYGEEIGVESLTKEVTDYIQQYTQTGGARPFGVALLVGGIEDGEPRLFE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                   E   +AIG       +            E    +A +A+   +D        
Sbjct: 153 TDPSGTPYEWQAVAIGGDRDEIQTFLEEEYDEGMDLEAGLSLALRALGSVSD-DGLDATG 211

Query: 180 IVLETLKVGDE 190
           + + T+ V  E
Sbjct: 212 VDVATIDVESE 222


>gi|226372926|gb|ACO52088.1| Proteasome subunit beta type-2 [Rana catesbeiana]
          Length = 199

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 16/184 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + V+    V++A D  V     + MK    K+ ++ +  ++    G + D     E ++K
Sbjct: 5   IGVQGSDYVMVAADT-VCANSIIKMKHEVDKMFKMSEKILLLC-VGEAGDTVQFAEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAM------ILIADKTITLVITGMGDV 127
            ++ Y  +        A      K    YLR+              D     +       
Sbjct: 63  NVQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNLLLAGYDDHDGPSLYYMDHLA 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
              +    A G G    LS          +   A E+ ++ ++      + +  +  +  
Sbjct: 123 ALAKAPFAAHGYGALLTLSILDRYYKPDLTREEAVELLKRCITELQKRFILSLPSFTVRV 182

Query: 185 LKVG 188
           +   
Sbjct: 183 IDKD 186


>gi|50549081|ref|XP_502011.1| YALI0C19382p [Yarrowia lipolytica]
 gi|49647878|emb|CAG82331.1| YALI0C19382p [Yarrowia lipolytica]
          Length = 250

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 15/185 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSAD-AFT 70
           HA T + +     +V+A + +V+        +A K+  L +  +   AG    +      
Sbjct: 31  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKMYTLNESMVCAVAGLNSDAGILVQN 90

Query: 71  LLERLEKKLEQY-----PNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
             +  +  L  Y       QL++    + + +     LR      + A   D     +  
Sbjct: 91  ARKSAQDYLRTYNEEIPCEQLVKHVCNVKQGYTQHGGLRPFGVSFIYAGYDDIRQFQLYQ 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYTNHNIV 181
                        ++G+  + A +  R       +  E    A+ I +  +    N N+ 
Sbjct: 151 SNPSGNYSGWKATSMGANKASAQTLLRQDYKDDMTLAEACELAVKILSKTMD---NTNLT 207

Query: 182 LETLK 186
            E L+
Sbjct: 208 SEKLE 212


>gi|171686844|ref|XP_001908363.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943383|emb|CAP69036.1| unnamed protein product [Podospora anserina S mat+]
          Length = 364

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 45/168 (26%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   VVV+  + + S  +            L   ++   FAG +ADA  L++
Sbjct: 126 RGTCAVGVKGQDVVVLGCEKR-SAMKLQDTRITPSKIGLVDTHVCLAFAGLNADARILVD 184

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   L            +A   +       +    +            +  +
Sbjct: 185 KARLEAQSHRLNLEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDKGSEVPRL 244

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  +       AIG                    E   R A+  
Sbjct: 245 YQTEPSGIYSAWKANAIGRSSKTVREFLERNYKEDMDREATVRLAIKS 292


>gi|145351122|ref|XP_001419934.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580167|gb|ABO98227.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 237

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 60/174 (34%), Gaps = 19/174 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + + +       +  +         +    +G +ADA+T++E 
Sbjct: 34  GSTAIAIKTREGVVLAVEKRATSPLMDASSLEKIAEIDAH--VGCAVSGLTADAWTMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +          L+    +             +  R     +L+A  D+    +
Sbjct: 92  GRAECQNHYFTYNEPMPVLSCTTSLCELAMSFAGEGEKRMSRPFGVALLVAGKDEDGYHL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
           +         +    AIGSG   A +A +       +   AE +A K +    +
Sbjct: 152 VHTDPSGTAVQYKAKAIGSGSEGAQTALQEEYRDDLTLKEAETLALKTLKAVME 205


>gi|318098723|ref|NP_001187839.1| proteasome subunit alpha type-5 [Ictalurus punctatus]
 gi|308324110|gb|ADO29190.1| proteasome subunit alpha type-5 [Ictalurus punctatus]
          Length = 241

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 59/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +   +  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPNSIEKIVEIDTHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R   A +L    D+   
Sbjct: 92  ARLETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGAALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + +++I
Sbjct: 152 QLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLTI 201


>gi|225714454|gb|ACO13073.1| Proteasome subunit beta type-4 precursor [Lepeophtheirus salmonis]
 gi|290462171|gb|ADD24133.1| Proteasome subunit beta type-4 [Lepeophtheirus salmonis]
 gi|290561042|gb|ADD37923.1| Proteasome subunit beta type-4 [Lepeophtheirus salmonis]
          Length = 251

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 9/148 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++  ++ D  V++  D  VS G+     N +++ ++ +  +I      +         
Sbjct: 38  GSSVFGIKYDEGVLMGADTLVSYGKMARYPNVQRLYKVNESTVITCTGDFADFQEITSML 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI---------ADKTITLVITGMG 125
              ++E+   Q   +    +    + +YL                      +  +     
Sbjct: 98  ERMQIEEERTQNEVTMQPRSLHIYLTRYLYKKRTDFDPKWTNIVVGGMQDGVPYLGYINM 157

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS 153
             L      +  G GGS AL   R L  
Sbjct: 158 IGLAYTEDAVTTGLGGSIALPLMRKLKD 185


>gi|145341760|ref|XP_001415971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576194|gb|ABO94263.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 206

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 46/163 (28%), Gaps = 11/163 (6%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVS-LGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             +  +   ++ +     V IA D ++          +  K+ ++     + G  G  AD
Sbjct: 2   SIMSYNGAAVIAMTGKDCVAIASDLRLGINQNQTAAVDYSKLHKIHDRLYL-GLTGLIAD 60

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVEL---------AKDWRMDKYLRNLEAMILIADKTIT 118
             TL ++L+ K + Y  +  R                + R   Y        L AD    
Sbjct: 61  QLTLAQKLKFKHDMYELRENRVMSPKVFGAVVSATLYEKRFSPYYTEPVVAGLDADGKPY 120

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
           +    +       +  +  G           +        E +
Sbjct: 121 ITSMDLIGADASTDDFVVAGDNVESLFGVCESFYKRDLDPEAL 163


>gi|52549531|gb|AAU83380.1| hypothetical protein GZ27G5_10 [uncultured archaeon GZfos27G5]
          Length = 261

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 16/180 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    +V+  D +++  + +   +  K+ ++ +    A     +     +  
Sbjct: 34  RGTTAIGIKAQDGIVLLVDKRLTS-RLLEGGSVEKIFQIDEHIGAATSGLVADARVLVDR 92

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ Q     L     LAK     K        LR     +LI         ++  
Sbjct: 93  GRVEAQINQIAYGELIDVQTLAKKICDFKQAYTQIGGLRPFGTALLIGGVYNGDCYLLET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD--ICVYTNH 178
                  E    AIGSG S          +       A  +  +A+    +  I + T  
Sbjct: 153 DPSGALLEYKATAIGSGRSVVTEMFEEKYNEDILLKDAILLGLEALYTVTEGKIDITTID 212


>gi|312067265|ref|XP_003136661.1| 20S proteasome alpha5 subunit [Loa loa]
 gi|307768173|gb|EFO27407.1| 20S proteasome alpha5 subunit [Loa loa]
          Length = 248

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 17/169 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +R    V++A + + +    V      K+ ++    +   FAG  AD+ TL+ER
Sbjct: 34  GSTSIGIRTTEGVILAAEKRATSKLMV-NDAIEKISKVDSH-VAVTFAGLIADSRTLVER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK-------------YLRNLEAMILIA--DKTITL 119
            + + + +     R          +                 R     +L A  D+    
Sbjct: 92  AQIEAQNFWFTYNRKIRVEDVTMSVANLALQFGDDDAKASMSRPFGVAMLFAGVDQDGPR 151

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           +          +    +IG+    A  + +       S  E  + A+SI
Sbjct: 152 LFHLDPSGTFIDCLAKSIGAASDGAEQSLKEQYHESLSLVEAEKIALSI 200


>gi|255552111|ref|XP_002517100.1| proteasome subunit beta type, putative [Ricinus communis]
 gi|223543735|gb|EEF45263.1| proteasome subunit beta type, putative [Ricinus communis]
          Length = 202

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 49/152 (32%), Gaps = 10/152 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  +   ++A D        V K+N  K+  L    +IA  +G   D     E ++K
Sbjct: 4   VFGLVGNDFAIVASDTSAVHSILVHKSNEDKIMVLDSHKLIAA-SGEPGDRVQFTEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K   ++  ++   DK     +        
Sbjct: 63  NVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +    A G G  ++L+       +  S EE
Sbjct: 123 LHKVDKGAFGYGSYFSLAMMDRHFHSGMSVEE 154


>gi|302758604|ref|XP_002962725.1| hypothetical protein SELMODRAFT_227361 [Selaginella moellendorffii]
 gi|302797208|ref|XP_002980365.1| hypothetical protein SELMODRAFT_178123 [Selaginella moellendorffii]
 gi|300151981|gb|EFJ18625.1| hypothetical protein SELMODRAFT_178123 [Selaginella moellendorffii]
 gi|300169586|gb|EFJ36188.1| hypothetical protein SELMODRAFT_227361 [Selaginella moellendorffii]
          Length = 254

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 50/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           +A   + V     VV+A + +V+        +  K+ ++       +AG    +      
Sbjct: 30  NAGAAIGVLARDGVVLAAEKRVTSKLLAASRSTEKMYKIDGHVAAAVAGIMADANILINT 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                +             QL+RS  +  + +     LR      + A    +    +  
Sbjct: 90  ARVAAQGYTLSYQEPMPVEQLVRSLCDTKQGYTQFGGLRPFGVSFIFAGYDSSYGFQLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        AIG+    A S  +     + + EE    A+ +
Sbjct: 150 SDPSGNYGGWKAGAIGANNQAAQSMLKQDYKDEITREEAVALALKV 195


>gi|195027251|ref|XP_001986497.1| GH21393 [Drosophila grimshawi]
 gi|193902497|gb|EDW01364.1| GH21393 [Drosophila grimshawi]
          Length = 245

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 28/189 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  +  VV+A + +++    ++     K+ ++ +    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTNDSVVLAVEKRITS-PLMVPKTVEKIVKVDEHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKTI- 117
              + + +           +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNEEMTVESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIENG 151

Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
              +               AIGSG   A    +   + + +        +S A D+C+ T
Sbjct: 152 KPQLWHMDPSGTYIRYSAKAIGSGSEGAQQNLQDKYTPEMT--------LSDATDLCLNT 203

Query: 177 NHNIVLETL 185
              ++ E L
Sbjct: 204 LKQVMEEKL 212


>gi|328775859|ref|XP_624341.2| PREDICTED: proteasome subunit alpha type-5 [Apis mellifera]
          Length = 269

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 55/170 (32%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+  + +++    +      K+  + K    A  +G  AD+ T+++R
Sbjct: 34  GSTAIGIATSEGVVLVVEKRITS-SLMEPTTVEKIVEIDKHIGCAA-SGLIADSRTMIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     +L A  D+   
Sbjct: 92  ARVECQNHWFVYNERMSVESTAQAVSNLAIQFGDSDDDGSAMSRPFGVAMLFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A    + +     + +E  + A+ I
Sbjct: 152 QLYHMDPSGTFVQFDAKAIGSGNEGAQQNLQEVYHKSMTLQEAIKAALVI 201


>gi|170120088|ref|XP_001891108.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164633684|gb|EDQ98242.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 174

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 13/122 (10%)

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVLEPEN 132
           +E +  Q  R    +     + + L   +        +   D T   + T        + 
Sbjct: 1   MEMHALQTGRKPRVVTAMTMLKQMLFRYQGQVGAALVLGGVDATGAHLFTIHPHGSTDKL 60

Query: 133 GVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI--CVYTNHNIVLETLKV 187
             + +GSG   A++   +          A  + +  ++IAA I   + +  NI    +  
Sbjct: 61  PYVTMGSGSLAAMAVFESGWKPNMEREDALNLVK--LAIAAGIFNDLGSGSNIDACIITA 118

Query: 188 GD 189
            +
Sbjct: 119 NN 120


>gi|115466708|ref|NP_001056953.1| Os06g0176000 [Oryza sativa Japonica Group]
 gi|109892867|sp|P0C1G8|PSA4A_ORYSJ RecName: Full=Proteasome subunit alpha type-4-1; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit alpha-3
 gi|223635743|sp|A2Y9X7|PSA4A_ORYSI RecName: Full=Proteasome subunit alpha type-4-1; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit alpha-3
 gi|8096319|dbj|BAA95822.1| putative proteasome subunit [Oryza sativa Japonica Group]
 gi|8096329|dbj|BAA95832.1| putative proteasome subunit alpha type 4 [Oryza sativa Japonica
           Group]
 gi|8671496|dbj|BAA96831.1| alpha 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|113594993|dbj|BAF18867.1| Os06g0176000 [Oryza sativa Japonica Group]
 gi|125596234|gb|EAZ36014.1| hypothetical protein OsJ_20320 [Oryza sativa Japonica Group]
          Length = 250

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A + L V     VV+ G+ +V+        +A K+ ++       +AG    +      
Sbjct: 30  NAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNT 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QL++S  +  + +     LR      L A         +  
Sbjct: 90  ARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A+G+    A S  +       + EE    A+ +
Sbjct: 150 SDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKV 195


>gi|330802071|ref|XP_003289044.1| proteasome subunit alpha type 7 [Dictyostelium purpureum]
 gi|325080878|gb|EGC34415.1| proteasome subunit alpha type 7 [Dictyostelium purpureum]
          Length = 248

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 60/189 (31%), Gaps = 17/189 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR   V+++  + + +        + RK+ ++     +  FAG +AD+  L+ 
Sbjct: 31  KGTVAVGVRGKDVIILGVEKKATAKLQDA-RSIRKIVKIDDHICL-TFAGLTADSRVLIN 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKT-ITLVI 121
           +   + + Y   +  S         +    +               +I+  D      + 
Sbjct: 89  KALMECQSYRLTVEDSPSVEYISKYIAGIQQRYTQSGGVRPFGISTLIVGFDSDGTPNLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-NI 180
                         AIG               T  S EE  + A+    +I V + + NI
Sbjct: 149 QTDPSGSYSSWKAAAIGRSSKTVSEFLEKNY-TDTSDEESIKLAVRALLEI-VESGNKNI 206

Query: 181 VLETLKVGD 189
            +  ++   
Sbjct: 207 EVAVIRRNQ 215


>gi|21465646|pdb|1IRU|E Chain E, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465660|pdb|1IRU|S Chain S, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|296740|emb|CAA43962.1| macropain subunit zeta [Homo sapiens]
          Length = 241

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + L     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQELYHKSMTLKEAIKSSLII 201


>gi|321458597|gb|EFX69663.1| hypothetical protein DAPPUDRAFT_300859 [Daphnia pulex]
          Length = 201

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 17/168 (10%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L +  +  V++A D   +    V K +  K+ +L    ++    G S D     E +EK
Sbjct: 4   VLGIACNDFVILASDMTNAHSILVNKQDEDKMFKLSD-RLLMAVTGESGDTTQFAEYIEK 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYL----RNLEAMIL------IADKTITLVITGMGDV 127
            ++ Y  +        A      + L    R+    ++       +++T   +       
Sbjct: 63  NIQLYKMRNGYELSPPAAANFTRRNLADSLRSRSPYMVNFLLAGYSERTGPELYWMDYLA 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
              +      G GG +++           +   A +I +K +   A+I
Sbjct: 123 SMIKTPFATHGYGGMFSIGIMDRYYRPDLTEQEAYDIMKKCV---AEI 167


>gi|256084819|ref|XP_002578623.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
 gi|238664003|emb|CAZ34861.1| proteasome subunit beta 2 (T01 family) [Schistosoma mansoni]
          Length = 201

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 48/155 (30%), Gaps = 11/155 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ ++ +  V++A D + +     +K +  K+ +     ++A   G S D     E +++
Sbjct: 4   IIGIKMNDFVLLAADMRCAHSILTIKHDELKMFKF-SKRVLAAVCGESGDTSQFSEFIQQ 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIADKT---ITLVITGMGDV 127
            ++ Y  +        A        +             +LIA         +       
Sbjct: 63  NMQLYEIRNGYELTPSAAANFTRNNMAESLRSRSPYFVNLLIAGFDLQTGPELYYLDYLA 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
              +      G G   ALS    +     +  E  
Sbjct: 123 SLIKVPFAVHGYGALVALSILDRMHRPDMTVNEAV 157


>gi|255540107|ref|XP_002511118.1| proteasome subunit alpha type, putative [Ricinus communis]
 gi|223550233|gb|EEF51720.1| proteasome subunit alpha type, putative [Ricinus communis]
          Length = 250

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 48/167 (28%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A T + +      V+ G+ +V+        +  K+ ++        AG    +      
Sbjct: 30  NAGTAIGILSKDGAVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   Y  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQCYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         A+G+    A S  +       + EE  + A+ +
Sbjct: 149 MSDPSGNYGGWKAAAVGANNQAAQSMLKQDYKDDITREEAVQLALKV 195


>gi|225705784|gb|ACO08738.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
          Length = 200

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  KV +L    ++    G + D     E ++K 
Sbjct: 5   IGIQGQDFVLVAADNVAAHSIVKMKQDQDKVFKLSDKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A ++ +K + 
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKKCIE 165


>gi|153880554|ref|ZP_02005004.1| ATP-dependent protease hslV [Beggiatoa sp. PS]
 gi|152062982|gb|EDN64996.1| ATP-dependent protease hslV [Beggiatoa sp. PS]
          Length = 40

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/36 (55%), Positives = 27/36 (75%)

Query: 153 STQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           +T  SA+EI  KA+ IAADIC+YTNHN+ +E+L   
Sbjct: 3   NTTLSAQEIVEKALHIAADICIYTNHNLTIESLTTE 38


>gi|52549700|gb|AAU83549.1| multicatalytic endopeptidase complex subunit alpha [uncultured
           archaeon GZfos30H9]
          Length = 241

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 52/178 (29%), Gaps = 16/178 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    V +  D +++  + +   +  K+ RL      A     +     +  
Sbjct: 28  RGTTAVGIKAQDGVALLVDKRLTS-RLLEGGSVEKIFRLDTHIGAATSGLVADARMLIDR 86

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD--KTITLVITG 123
            R+E ++ +       +   LAK     K        LR     +LI       T +   
Sbjct: 87  GRIESQINKVVYDEPIAVETLAKKICDYKQAFTQYGGLRPFGTALLIGGVYNGNTYLFET 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS-----IAADICVYT 176
                  E    AIGSG S                E+     +          I + T
Sbjct: 147 DPSGALLEYKATAIGSGRSIVTELLEQQYKEGIKLEDAILLGLETLYKVTEGKIDITT 204


>gi|302849887|ref|XP_002956472.1| hypothetical protein VOLCADRAFT_110015 [Volvox carteri f.
           nagariensis]
 gi|300258170|gb|EFJ42409.1| hypothetical protein VOLCADRAFT_110015 [Volvox carteri f.
           nagariensis]
          Length = 193

 Score = 60.0 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 48/161 (29%), Gaps = 12/161 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++  D   +     +K +  K+  +    +    AG + D     E +   
Sbjct: 5   VGIKGKDFVMVCSDTSAAQSIISIKQDEDKIVPIDDHKVFC-IAGEAGDRVNFSEYIIAN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADKTI-TLVITGMGDVLE 129
           ++ Y  +        +        L         +   ++   DK     +         
Sbjct: 64  VKLYALRNGTELNTKSVANYTRGELATALRSSPYHCNLLLAGYDKETGPALYWLDYLATL 123

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
            +      G G  + +S    + + + + +E    AM  A 
Sbjct: 124 SKVNTGGTGYGSYFTMSLFDKMWNPELTVDEAV--AMMDAG 162


>gi|66822433|ref|XP_644571.1| proteasome subunit beta type 4 [Dictyostelium discoideum AX4]
 gi|66822651|ref|XP_644680.1| proteasome subunit beta type 4 [Dictyostelium discoideum AX4]
 gi|122057658|sp|Q556Q0|PSB4_DICDI RecName: Full=Proteasome subunit beta type-4
 gi|60472694|gb|EAL70645.1| proteasome subunit beta type 4 [Dictyostelium discoideum AX4]
 gi|60472850|gb|EAL70799.1| proteasome subunit beta type 4 [Dictyostelium discoideum AX4]
          Length = 259

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 59/174 (33%), Gaps = 16/174 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++ D  VV+  D  +S G      +  ++++ G   I+ G +G  +D  ++   
Sbjct: 44  GTSVIAIKYDKGVVMGSDMLLSYGSLARFNSTERMKKFGGYTIV-GASGEYSDFQSITNT 102

Query: 75  LEKKL-EQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTITLVITGM 124
           L   + + +                + + L              +++      + +    
Sbjct: 103 LNDLVTDDHCMDDGSKLSSEEIWNYLARVLYNQRNRGNPLWNTLVVMGYQGGKSFLGKVD 162

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALM--STQNS---AEEIARKAMSIAADIC 173
                 ++ ++  G G   AL   R     +   +   A+++ +  + +     
Sbjct: 163 LVGTCYKDDIITTGYGSHIALPLLRKARDENPNMNLEQAKQLIQDCLRVLFYRD 216


>gi|307104566|gb|EFN52819.1| hypothetical protein CHLNCDRAFT_26444 [Chlorella variabilis]
          Length = 240

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 23/188 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + VR D  VV+A + +V+    +   +  KV  + +   +A  +G +ADA TL++ 
Sbjct: 34  GSTAIAVRTDEGVVMAVEKRVTS-PLLEPTSIEKVAEVDEHIGVA-MSGLTADARTLIDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM--------------DKYLRNLEAMILIADKTI--- 117
              + +Q+           +    +                  R     +L+A       
Sbjct: 92  GRVETQQHRFTYNEPMPLESLTQSLCDLALRFGEDDEGEGGMSRPFGVALLVAGWDAEGG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
            ++          +    AIGSG   A +A +       +   AE +A   +    +  V
Sbjct: 152 PVLFHTDPSGTYVKYEAKAIGSGSEGAQTALQESYRKDMTLKEAEVLALSTLKQVMEEKV 211

Query: 175 YTNHNIVL 182
            T  N+ +
Sbjct: 212 -TATNVDI 218


>gi|256052875|ref|XP_002569974.1| proteasome subunit alpha 3 (T01 family) [Schistosoma mansoni]
 gi|227284733|emb|CAY17535.1| proteasome subunit alpha 3 (T01 family) [Schistosoma mansoni]
          Length = 254

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 51/173 (29%), Gaps = 16/173 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSS------ 65
           ++ T + ++    VV A +  V+  +       +++  +      ++ GF   +      
Sbjct: 33  NSGTAIAIQGKDCVVFAVENIVTS-KLYEPGCVKRIYNIDDHIGMVVMGFQTDAKAIVEA 91

Query: 66  --ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
              +          ++  Y      +    A           +  ++   +     +   
Sbjct: 92  AREECANYRNSFGSRIPLYSLTERLAMYMHAHTLYSAVRPFGVSVLLGSYENDGPHLFVI 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
               L       AIG     A +    L     S EE+ ++A  I     +YT
Sbjct: 152 EPSGLSYAYFGCAIGKAKQNATTEIEKLKMNDLSPEELIKEAAKI-----IYT 199


>gi|219564274|dbj|BAH03705.1| 20S proteasome beta-type subunit [Saccharomyces pastorianus]
          Length = 85

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           T+I+ V     V++  D + + G  +      K+ R+         +GS+AD   + + 
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAVADI 77

Query: 75 LEKKLEQY 82
          ++  LE Y
Sbjct: 78 VQYHLELY 85


>gi|224006550|ref|XP_002292235.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971877|gb|EED90210.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 184

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 17/187 (9%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLG-QTVMKANAR---------KVRRLGKGNIIAGFA 62
            +  +IL +     V IA D +  LG QT+   N           ++  L   N +  + 
Sbjct: 1   FNGGSILAMSGRNSVAIAIDARFGLGMQTIATMNTDNDDASDGNPRIVLLPNSNTLLAWT 60

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           G   D  +  E +    +  P  +      L    R   Y      + L   +    ++T
Sbjct: 61  GLYGDGISFAEEMN---KMSPRAITMLVSHLLYRRRSAPYYVEPVVVGLENVRVPPYLVT 117

Query: 123 GM-GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNH 178
                        +  G         A AL       EE+     +A   A +    + +
Sbjct: 118 TDMLGAQSTSTSFVCSGVASRSLHGTAEALWRPNLEGEELVEVCGRAFVSALERDCLSGY 177

Query: 179 NIVLETL 185
             V+  +
Sbjct: 178 GAVVYLI 184


>gi|198432945|ref|XP_002127299.1| PREDICTED: similar to 20S proteasome alpha5 subunit [Ciona
           intestinalis]
          Length = 273

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 55/169 (32%), Gaps = 20/169 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  KV  +    +    +G  AD+ T+++R
Sbjct: 65  GSTAIGIQTADGVVLAVEKRITS-PLIEASSIEKVFEIDTH-VGCAMSGLIADSKTMIDR 122

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIADKTI--- 117
              + + +           +    +                  R     +L A       
Sbjct: 123 ARVEAQNHWFTFDEKMRVQSITKAVSNLALQFGEEDSEPGAMSRPFGVALLFAGYDEGLG 182

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
             +               AIGS    A ++         + EE A+K++
Sbjct: 183 PQLYHLDPSGTFVSCSAKAIGSASEGAQTSLEEQFHKSMTIEE-AQKSI 230


>gi|307106162|gb|EFN54409.1| hypothetical protein CHLNCDRAFT_135748 [Chlorella variabilis]
          Length = 227

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 41/153 (26%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
             +R    V++  D        VMK +  K+  +    + A  +G + D     E +   
Sbjct: 37  CGIRGKDFVMVCSDTTAVQSIVVMKQDEDKLVPVDSHKLFA-VSGEAGDRVNFSEYIIAN 95

Query: 79  LEQYPNQLLRSSVELAKDW----------RMDKYL-RNLEAMILIADKTITLVITGMGDV 127
           +  Y  +   +    A             R   Y    L A     +     +       
Sbjct: 96  VRLYALRNGATLSTKAVANYTRSELATALRKSPYHTNLLMAGYDQGEGGGPALYWCDYLA 155

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                 +   G G  + LS    L     +  E
Sbjct: 156 TLHHMNICGTGYGSYFVLSMFDKLWHPNVTEAE 188


>gi|316934300|ref|YP_004109282.1| 20S proteasome subunits A/B [Rhodopseudomonas palustris DX-1]
 gi|315602014|gb|ADU44549.1| 20S proteasome A and B subunits [Rhodopseudomonas palustris DX-1]
          Length = 153

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 31/178 (17%)

Query: 17  TILTVRKDGVVVIAGDGQVSL-GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T +  R    V +A DG+V+  G  ++  N +K+RRL  G++ A   G       L+E L
Sbjct: 2   TTIAWR--DGV-LAADGRVTYGGSLILTDNCKKIRRLSDGSLFA-LCGDPVLEERLIEWL 57

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           E        +   S     KD           A+++  D  ++         +   +G  
Sbjct: 58  ENC------EEGESPPPQGKD---------FTAILVDHDGALSTYEGSGDRFMPMYDGFA 102

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLET---LKVGDE 190
           A GSG  +A  A              A +A+  AA   V T   + +E    +   +E
Sbjct: 103 AFGSGMDFAYGAMEVG--------ATAEEAVKAAARRNVSTGGVVQVERPGLIDEDEE 152


>gi|221128953|ref|XP_002160944.1| PREDICTED: similar to Proteasome subunit beta type-4 [Hydra
           magnipapillata]
          Length = 259

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 58/188 (30%), Gaps = 14/188 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF--TLL 72
            T++L +R DG V IA D   S G         ++  +    ++A     +        L
Sbjct: 48  GTSVLAIRFDGGVAIAADMLGSYGSLAKYTRLSRMTEVNPKTVVAASGDYADYQQISEYL 107

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMG 125
           ER+  + +   +    +   +    R+  Y +  +   L             + +     
Sbjct: 108 ERMMIQNDIEDDGHGYTPQSIFSFLRLLMYQKRSKFEPLWNTLVVGGYHNGSSFLGYVDK 167

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIAR---KAMSIAADICVYTNHNI 180
             +  E+  +A G G   A       +  +   S  E  +     + +       +++  
Sbjct: 168 LGVAYEDNTIATGYGAYIARPLMTKALESNPNMSKAEAVKLLIDCLKVLFYRDARSHNRF 227

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 228 EISIITEE 235


>gi|156087519|ref|XP_001611166.1| proteasome A-type and B-type family protein [Babesia bovis]
 gi|154798420|gb|EDO07598.1| proteasome A-type and B-type family protein [Babesia bovis]
          Length = 236

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 49/166 (29%), Gaps = 15/166 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
                L ++    VVIA + + +L   V   +  K+    +    + AG           
Sbjct: 32  KGAPTLGIKSKNGVVIASE-RATLSPLVESDSINKIDYFTRNIGVVAAGMPADFRIVLKK 90

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             +   K +           L++    + +++     +R     +L+A  D     +   
Sbjct: 91  GRKQAIKYKLLYGDDIPGAELVKEVASIMQEYTHSGGVRPFGISLLLASYDSDGPQLYQI 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                       AIG      ++      +     E+    A+ IA
Sbjct: 151 DPSGAYFGWRATAIGDRMQNNMTFLEKRYNPDLELED----AIHIA 192


>gi|225704100|gb|ACO07896.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
          Length = 200

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 52/162 (32%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L    ++    G + D     E ++K 
Sbjct: 5   IGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A ++ +K + 
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKKCIE 165


>gi|158314139|ref|YP_001506647.1| hypothetical protein Franean1_2307 [Frankia sp. EAN1pec]
 gi|158109544|gb|ABW11741.1| conserved hypothetical protein [Frankia sp. EAN1pec]
          Length = 195

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 52/165 (31%), Gaps = 13/165 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T I+ V  DG VVI GD     G ++      KV R   G  + GF  S      L   L
Sbjct: 2   TCIVGVEHDGRVVIGGDSAGVAGWSITVRADTKVFR--NGEFVMGFTDSFRMGQLLRYSL 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNL---------EAMILIADKTITLVITGMGD 126
              +    +     + E     R                   + L+  +     I     
Sbjct: 60  VPPVPHSWDLDRFMATEFVSVVRDCLRDGGFARNDAGNESGGLFLVGIRGQLYRIDSDYQ 119

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
           +    +   A G G  YA  +  + +      EE  RKA+  AA 
Sbjct: 120 IGRTLDNYDAAGCGEEYARGSLHSTV--GEEPEERVRKALEAAAH 162


>gi|116754662|ref|YP_843780.1| proteasome subunit alpha [Methanosaeta thermophila PT]
 gi|116666113|gb|ABK15140.1| Proteasome endopeptidase complex [Methanosaeta thermophila PT]
          Length = 240

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + ++    V +  D +++  + +   +  K+ ++      A     +     +  
Sbjct: 28  RGTTAVGIKATDGVAVLVDKRITS-RLMEPESIEKIFQIDTHIGAATSGLVADARILVDR 86

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITG 123
            R+E ++ +           L+K     K                +I+ A+     +   
Sbjct: 87  ARVECQINRLIYDERIGVEALSKKICDFKQTYTQYGGVRPFGTALLIIGAEDNRVRLFET 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
                  E     IG+G +  +    A      +  E   +  +A+  A++
Sbjct: 147 DPSGALLEYKATGIGAGRAAVMEVFEAKYREDMNMREAILLGLEALYRASE 197


>gi|209878806|ref|XP_002140844.1| proteasome subunit beta type 3 [Cryptosporidium muris RN66]
 gi|209556450|gb|EEA06495.1| proteasome subunit beta type 3, putative [Cryptosporidium muris
           RN66]
          Length = 194

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/171 (9%), Positives = 46/171 (26%), Gaps = 12/171 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE-- 76
           + ++    + IA D ++   Q    + +           + GF+G + D  T+   ++  
Sbjct: 1   MAMKGKNCIAIATDMRMGFNQFSTISTSFNKVINPSSKTLIGFSGLATDIHTVSSTIKFH 60

Query: 77  ---KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMG-DVLE 129
               KL +      ++   +       K         ++A         +        L 
Sbjct: 61  TNLYKLREEREIDAKALSHMTASLLYSKRFSPYLVEPIVAGLDKNNEPYLAGYDLIGCLS 120

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTN 177
             +     G+          +        +++     + M    D    + 
Sbjct: 121 KCSDFAISGTADRQLFGICESFYKPDMDTDQLMETISQCMLAGLDRDALSG 171


>gi|308323675|gb|ADO28973.1| proteasome subunit beta type-4 [Ictalurus punctatus]
          Length = 215

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+  G V+IA D   S G      N  ++ ++    I+      +   +     
Sbjct: 4   GTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDATILGASGDYADYQYIKQVI 63

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGDVLEP-- 130
            +  +++       S    A    + +  Y R      L     I     G   +     
Sbjct: 64  EQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSRMNPLWNTVVIGGFYNGESFLGYVDK 123

Query: 131 -----ENGVMAIGSGGSYALSAARALMST-----QNSAEEIARKAMSIAADICVYTNHNI 180
                E   +A G G   A    R ++       ++ A  +  + + +       + +  
Sbjct: 124 LGVAYEAPAVATGFGAYLAQPLMREVLENKVEVSKDEARALIERCLKVLYYRDARSYNRH 183

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 184 EIAIVTQE 191


>gi|327289111|ref|XP_003229268.1| PREDICTED: proteasome subunit beta type-2-like [Anolis
           carolinensis]
          Length = 201

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 53/162 (32%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L ++    V++A D   +     MK +  K+ ++ +  ++    G + D     E ++K 
Sbjct: 5   LGIQGPDFVLVAADTVAASSIVHMKRDHDKMFKMSEKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHDGPTLYYMDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A E+ +K + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYKPGITREEAIEVLKKCLE 165


>gi|330038504|ref|XP_003239615.1| 26S proteasome SU B6 [Cryptomonas paramecium]
 gi|327206539|gb|AEA38717.1| 26S proteasome SU B6 [Cryptomonas paramecium]
          Length = 245

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 53/158 (33%), Gaps = 9/158 (5%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
                + ++ TI+++      V+  D +   G ++      ++ ++ +  I+A  AG  A
Sbjct: 33  NFNPYQNNSGTIISIANQNYCVVVSDTRYLNGFSIPTRFQTRIFKISEKIILA-SAGMFA 91

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------ 120
           DAF   ++ +  ++ Y   + ++    +  + +   L +           ++ +      
Sbjct: 92  DAFFFQKKTKTSIKDYEYGIKKAISVESCAFYISSLLYSKRFFPYYVFNVLSGLDENDKG 151

Query: 121 --ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
              +        +     IG   +       +    Q 
Sbjct: 152 SVYSFDSVGSFEKLKFNCIGESCAAIQPLLDSYFEHQL 189


>gi|209730324|gb|ACI66031.1| Proteasome subunit beta type-2 [Salmo salar]
          Length = 200

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 52/162 (32%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L    ++    G + D     E ++K 
Sbjct: 5   IGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLPC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A ++ +K + 
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAVDLLKKCVE 165


>gi|213511474|ref|NP_001134432.1| Proteasome subunit alpha type-5 [Salmo salar]
 gi|209733218|gb|ACI67478.1| Proteasome subunit alpha type-5 [Salmo salar]
 gi|303663916|gb|ADM16120.1| Proteasome subunit alpha type-5 [Salmo salar]
          Length = 241

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 59/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDTHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGLDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + +++I
Sbjct: 152 QLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLTI 201


>gi|223646410|gb|ACN09963.1| Proteasome subunit beta type-2 [Salmo salar]
 gi|223672257|gb|ACN12310.1| Proteasome subunit beta type-2 [Salmo salar]
          Length = 200

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 52/162 (32%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L    ++    G + D     E ++K 
Sbjct: 5   IGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A ++ +K + 
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAVDLLKKCVE 165


>gi|160331789|ref|XP_001712601.1| prsB6 [Hemiselmis andersenii]
 gi|159766050|gb|ABW98276.1| prsB6 [Hemiselmis andersenii]
          Length = 251

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 53/156 (33%), Gaps = 9/156 (5%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
                  + +  T+L +      +IA D + S G  +      ++ ++    I+A  AG 
Sbjct: 38  NSDFNFYQNNGGTVLGISTKNFSLIASDTRFSFGMALPTRTTTRIIKISSNIILA-SAGM 96

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM-----DKYLRNLEAMILIADKT--- 116
            +D F L   ++  ++++  + L   +  +  + +      K      +  L+A      
Sbjct: 97  YSDIFFLQNLIQIGIKKFKTENLEKCLISSCAFYLSYILYSKRFFPYYSFNLLAGLEKNR 156

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM 152
              +          +  +  +G+G S        + 
Sbjct: 157 EGSIFCFDAIGSFEKTSISCVGNGQSQIQPILDGIF 192


>gi|183979272|dbj|BAG30797.1| similar to CG1519-PA [Papilio xuthus]
          Length = 255

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 45/165 (27%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T++ +R    VV A +  V+       AN R        G  +AG    +       
Sbjct: 33  NSGTVIGLRGKDGVVFAVEKLVTSKLYEPGANKRIFHVDAHVGMAVAGLISDARQIVETA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLE---AMILIADKTITLVITG 123
                              L          + +   +R       M   ++     +   
Sbjct: 93  RTEAPNYRSQYGIQVPLKYLNERVSMYMHAYTLYSAVRPYGCSVVMGSWSEHEGPQMYML 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       A+G     A +    L     + +E+ ++A  I
Sbjct: 153 DPSGVSFSYFGCAVGKAKQAAKTEIEKLKLADMTVKELVKEAARI 197


>gi|259089098|ref|NP_001158587.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
 gi|225705056|gb|ACO08374.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
          Length = 200

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 52/162 (32%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L    ++    G + D     E ++K 
Sbjct: 5   IGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A ++ +K + 
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKKCIE 165


>gi|292655249|ref|YP_003535146.1| proteasome subunit alpha [Haloferax volcanii DS2]
 gi|300669661|sp|Q9V2V6|PSA1_HALVD RecName: Full=Proteasome subunit alpha 1; AltName: Full=20S
           proteasome alpha subunit 1; AltName: Full=Proteasome
           core protein PsmA 1; Contains: RecName: Full=Proteasome
           subunit alpha 1, N-terminally processed
 gi|291372203|gb|ADE04430.1| proteasome alpha subunit [Haloferax volcanii DS2]
          Length = 252

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 57/190 (30%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR    VV+A D + S    +   +  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGTASIGVRTPEGVVLAADKR-SRSPLMEPTSVEKIHKADDHIGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQLLRSS------VELAKDWRMDKYLRNLEAMILI-----ADKTITLVIT 122
              ++ +    +            E+    +    +       +       +     +  
Sbjct: 93  FARRQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGVENGTPRLYE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS-IAADICVYTN-HNI 180
                   E   ++IG+                 + +E    A+  IA+     T    +
Sbjct: 153 TDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLDEGIELALEAIASTSDEGTAPDGV 212

Query: 181 VLETLKVGDE 190
            + T+    E
Sbjct: 213 DVATVSAETE 222


>gi|115466646|ref|NP_001056922.1| Os06g0167600 [Oryza sativa Japonica Group]
 gi|75287537|sp|Q5VRG3|PSA4B_ORYSJ RecName: Full=Proteasome subunit alpha type-4-2; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit alpha-3
 gi|229564386|sp|P0C8Y9|PSA4B_ORYSI RecName: Full=Proteasome subunit alpha type-4-2; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit alpha-3
 gi|5091520|dbj|BAA78755.1| alpha 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|55296221|dbj|BAD67962.1| alpha 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|113594962|dbj|BAF18836.1| Os06g0167600 [Oryza sativa Japonica Group]
 gi|215695502|dbj|BAG90693.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218197662|gb|EEC80089.1| hypothetical protein OsI_21826 [Oryza sativa Indica Group]
 gi|222635030|gb|EEE65162.1| hypothetical protein OsJ_20263 [Oryza sativa Japonica Group]
          Length = 250

 Score = 59.2 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A + L V     VV+ G+ +V+        +A K+ ++       +AG    +      
Sbjct: 30  NAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNT 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QL++S  +  + +     LR      L A         +  
Sbjct: 90  ARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A+G+    A S  +       + EE    A+ +
Sbjct: 150 SDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKV 195


>gi|255717723|ref|XP_002555142.1| KLTH0G02376p [Lachancea thermotolerans]
 gi|238936526|emb|CAR24705.1| KLTH0G02376p [Lachancea thermotolerans]
          Length = 251

 Score = 59.2 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + V     +V+A + +V+       +++ K+ +L       +AG    +      
Sbjct: 31  HAGTAIGVMAKDGIVLAAERKVTSKLLEQGSSSEKLYKLNDNITVAVAGLTADAEILINT 90

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                +   +  N+      L+R   ++ + +     LR   A  + A   D+    + T
Sbjct: 91  ARLFAQNYLKSYNEEIPVEILVRRLSDVKQGYTQHGGLRPFGASFIYAGYDDRYGYQLYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                       +++G+  S A +  +       + EE    A+  
Sbjct: 151 SNPSGNYSGWKAISVGANTSAAQTLLQMDYKDDITVEEATELALKT 196


>gi|170033319|ref|XP_001844525.1| proteasome subunit beta type 4 [Culex quinquefasciatus]
 gi|167874263|gb|EDS37646.1| proteasome subunit beta type 4 [Culex quinquefasciatus]
          Length = 268

 Score = 59.2 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 6/143 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    V+I  D  VS G      +  +V ++     I G  G  AD   +   
Sbjct: 55  GTSVVGLKFANGVIITADKLVSYGSLARFHDVDRVYKV-NDKTIIGIGGDFADFQFIKRH 113

Query: 75  LEKK-LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           +++K ++             +    + + + N  +      K + L I   G        
Sbjct: 114 IDQKVVDDMCLADKNELKPKSLYNWLTRVMYNRRSEF----KPLYLDIVVGGMQDGEPFL 169

Query: 134 VMAIGSGGSYALSAARALMSTQN 156
                 G +Y  +       T  
Sbjct: 170 GHVNLRGRAYTSNVVATGYGTHL 192


>gi|48477876|ref|YP_023582.1| proteasome subunit alpha [Picrophilus torridus DSM 9790]
 gi|59798286|sp|Q6L0W3|PSA_PICTO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|48430524|gb|AAT43389.1| proteasome alpha subunit [Picrophilus torridus DSM 9790]
          Length = 234

 Score = 59.2 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL-- 71
             +T L ++    V +  + +V   + V K +  K++ +            +     +  
Sbjct: 33  KGSTALGIKFKDGVALISEKKV-RSRLVEKTSLEKIQLIDDRVAAVTSGLVADARVLIDF 91

Query: 72  ------LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
                  E++          L++   +  + +     +R     I+ A  D     +   
Sbjct: 92  ARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLDSIGPRLFDC 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
                  E   ++IG+G     +          S +E  R  M IAA
Sbjct: 152 DPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSEDEAIR--MGIAA 196


>gi|148233324|ref|NP_001085788.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Xenopus
           laevis]
 gi|49118346|gb|AAH73346.1| MGC80760 protein [Xenopus laevis]
          Length = 247

 Score = 59.2 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 60/170 (35%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTAEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILI--ADKTIT 118
              + + +      +    +    +                  R     +L   AD+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGADEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + +++I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLTI 201


>gi|323448817|gb|EGB04711.1| hypothetical protein AURANDRAFT_55099 [Aureococcus anophagefferens]
          Length = 274

 Score = 59.2 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 51/189 (26%), Gaps = 23/189 (12%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           K      +  ++      G  +IA D Q   G  +  +   +V  L    ++ G +G +A
Sbjct: 50  KFRPYANNGGSLAAACGHGFALIAADSQFLHGMMITSSVFDRVVPLSD-VVLMGTSGCAA 108

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D  ++   +  + E+Y      S             +             +  + +    
Sbjct: 109 DCESMTHDVRTEAERYIVGAKLSMDASVAAQLCSGAMYARRGFPHHMSLVVCGLDSVGFG 168

Query: 127 VLE--------PENGVMAIGSGGSYALSAARAL--------------MSTQNSAEEIARK 164
            +          E   +  GS      S    L                  + A E+   
Sbjct: 169 RVFVFDSIGSLMEGPTVTAGSAREVLQSVLDGLTPWHCSSCGKRVPNFQCADDAREVLLA 228

Query: 165 AMSIAADIC 173
           A  +AA   
Sbjct: 229 AFRVAARRD 237


>gi|307202328|gb|EFN81786.1| Proteasome subunit alpha type-3 [Harpegnathos saltator]
          Length = 254

 Score = 59.2 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 45/164 (27%), Gaps = 9/164 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +  T++ +R    VV A +  V+       AN R +      G  ++G    +       
Sbjct: 33  NGGTVIGLRGKDGVVFAVEKIVTSKLFESGANKRILNIDQHVGMAVSGIISDARQVAETA 92

Query: 73  ERLEKKLEQYPN--------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
                  +                S    A              ++   +     +    
Sbjct: 93  RVEAASYKAQYGVGIPLKYLNERVSMYMHAYTLYSAVRPYGCSVLLGAYEADGPAMYMID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +       A+G     A +    L  ++ + +E+ ++A  I
Sbjct: 153 PSGVSYGYYGCAVGKAKQSAKTEIEKLKLSEMTCKELVKEAARI 196


>gi|219853090|ref|YP_002467522.1| proteasome subunit alpha [Methanosphaerula palustris E1-9c]
 gi|254783492|sp|B8GEZ3|PSA_METPE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|219547349|gb|ACL17799.1| Proteasome endopeptidase complex [Methanosphaerula palustris E1-9c]
          Length = 241

 Score = 59.2 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 57/171 (33%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
             TT + ++ +  +V+  D +V+  + +  ++  K+ ++     +A  G  G +      
Sbjct: 34  RGTTAVGIKCNDGIVLLVDKRVNS-KLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDR 92

Query: 72  LE------RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITG 123
                   R+    +     L +   +  + +      R     +LIA  +     +   
Sbjct: 93  ARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFGGARPYGTALLIAGISDGQFRLFET 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
                  E     IG G +  +       + + S  +   +  KA+  A +
Sbjct: 153 DPSGTLLEYKATGIGIGRNAVMKVFEEEYNPEASIRDAILLGLKALHAATE 203


>gi|74141404|dbj|BAE35982.1| unnamed protein product [Mus musculus]
          Length = 241

 Score = 59.2 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIKTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 201


>gi|162606130|ref|XP_001713580.1| 26S proteasome SU B6 [Guillardia theta]
 gi|13794500|gb|AAK39875.1|AF165818_83 26S proteasome SU B6 [Guillardia theta]
          Length = 239

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 48/155 (30%), Gaps = 11/155 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKA-NARKVRRLGKGNIIAGFA 62
           +       + +   +L +  +   V+A D ++S+G ++    N R ++       + G +
Sbjct: 26  LNRNFDPYQNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRILKI--SNLCLLGSS 83

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV-- 120
           G  +D   L ++L  ++ +               +     L +           +T +  
Sbjct: 84  GMISDINILHQKLRNEIFRLKYLNNTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGINE 143

Query: 121 ------ITGMGDVLEPENGVMAIGSGGSYALSAAR 149
                  T         N    +G+  S A     
Sbjct: 144 LGKASNYTYDAIGSFDCNHASTVGNCQSSAQCIMD 178


>gi|110667477|ref|YP_657288.1| proteasome subunit alpha [Haloquadratum walsbyi DSM 16790]
 gi|121689860|sp|Q18K08|PSA_HALWD RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|109625224|emb|CAJ51644.1| proteasome alpha-1subunit [Haloquadratum walsbyi DSM 16790]
          Length = 250

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 23/198 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + +R    +V+A D + S    +   +  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGTASVGIRTPDGIVLAADKR-SRSPLMEPTSVEKIHKTDDHVGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQLLRSSVELAK-DWRMDKYL--------RNLEAMILIADKTI--TLVIT 122
              ++ +    +               D           R     +LI         +  
Sbjct: 93  FARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIEDGSPRLYE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI-------AADI 172
                   E   ++IG+  S          + + S +E   +A + ++I       AA +
Sbjct: 153 TDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRTIAISNDDELTAAGV 212

Query: 173 CVYTNHNIVLETLKVGDE 190
            V T  +   E +++ ++
Sbjct: 213 DVATVASDTEEFIELTND 230


>gi|7527332|dbj|BAA94260.1| proteasome subunit LMP7 [Xenopus laevis]
 gi|7527338|dbj|BAA94263.1| proteasome subunit LMP7B [Xenopus laevis/gilli]
 gi|7527340|dbj|BAA94264.1| proteasome subunit LMP7B [Xenopus laevis/gilli]
 gi|7527365|dbj|BAA94274.1| proteasome subunit LMP7B [Xenopus ruwenzoriensis]
 gi|7527367|dbj|BAA94275.1| proteasome subunit LMP7B [Xenopus ruwenzoriensis]
          Length = 87

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 1/88 (1%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++A D + S G  +    A KV  +    ++   +GS+AD       L K+   Y  +  
Sbjct: 1   IVAVDSRASAGSYIASLKANKVIEINPY-LLGTMSGSAADCQHWERLLAKECRLYQLRNN 59

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADK 115
                 +    +   +       L    
Sbjct: 60  SRISVSSASKLLCNMMLQYRGSGLSVGS 87


>gi|7527359|dbj|BAA94271.1| proteasome subunit LMP7B [Xenopus vestitus]
          Length = 87

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 1/88 (1%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++A D + S G  +    A KV  +    ++   +GS+AD       L K+   Y  +  
Sbjct: 1   IVAVDSRASAGSYIASLKANKVIEINPY-LLGTMSGSAADCQHWERLLAKECRLYQLRNN 59

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADK 115
                 +    +   +       L    
Sbjct: 60  SRISVSSASKLLCNMMLQYRGSGLSMGS 87


>gi|454256|emb|CAA82203.1| Pre2p [Saccharomyces cerevisiae]
          Length = 114

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
           K    +     D    +  +  +GSG ++A     +      S E+   + ++++  AA 
Sbjct: 9   KEGPTIYYVDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAH 68

Query: 172 ICVYTNHNIVL 182
              Y+  ++ L
Sbjct: 69  RDAYSGGSVNL 79


>gi|58042495|gb|AAV66402.2| proteasome subunit alpha-type 5 [Macaca fascicularis]
          Length = 210

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 18  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 76  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 135

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 136 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 185


>gi|76802504|ref|YP_327512.1| proteasome subunit alpha [Natronomonas pharaonis DSM 2160]
 gi|121708068|sp|Q3IPJ1|PSA_NATPD RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|76558369|emb|CAI49960.1| proteasome alpha subunit [Natronomonas pharaonis DSM 2160]
          Length = 255

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 65/191 (34%), Gaps = 17/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + +R +  VV+  D ++     + + +  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGTASIGIRTEDGVVLVVDKRI-RSPLMERTSVEKIHKADDHIGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVIT 122
              ++ +    +         L ++  +  + +      R     ++I         +  
Sbjct: 93  FARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIEDGEPRLYE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                   E   +A+G+             S     E    +A +A++   D    T   
Sbjct: 153 TDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALASVND-DSLTPEG 211

Query: 180 IVLETLKVGDE 190
           I L T+ V D+
Sbjct: 212 IGLATVTVDDD 222


>gi|226358525|gb|ACO51115.1| proteasome subunit beta type-8 precursor [Hypophthalmichthys
           nobilis]
          Length = 87

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 1/87 (1%)

Query: 27  VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQL 86
           V++A D + S G  V     +KV  +    ++   +GS+AD       L ++   Y  + 
Sbjct: 1   VMVAVDSRASAGSYVSTQMFKKVIEINPY-LLGTMSGSAADCVYWERVLARECRIYKLRN 59

Query: 87  LRSSVELAKDWRMDKYLRNLEAMILIA 113
                  A    +   + N   M L  
Sbjct: 60  KERISVSAASKLLANMVANYRGMGLSM 86


>gi|326433120|gb|EGD78690.1| proteasome subunit alpha type-4 [Salpingoeca sp. ATCC 50818]
          Length = 281

 Score = 59.2 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     VV+A +   +     M ++A K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILSSEGVVLAAEKISTAKLLDMSSSAEKIFKLDEHVACSVAGITADANILVNY 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L    ++            +L+    ++ + +     +R     ++           +  
Sbjct: 90  LRLTAQRHYLTYQEPIPLERLITLVCDVKQAYTQYGGMRPFGTSLIFMGWDRHFGFQLYR 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                          GS    A S  ++    + + EE   +A K ++
Sbjct: 150 SDPSGNFGGWKATCTGSNSQSAESILKSEYKEECTLEEALLLAVKVLN 197


>gi|56757988|gb|AAW27134.1| SJCHGC06662 protein [Schistosoma japonicum]
          Length = 248

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 16/164 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+A D  VS G      +  ++ ++ +  ++   +G  AD   L   
Sbjct: 30  GTSVIGIKYKDGVVLAADLLVSYGSLAKYMDFERMFKVNESTVMCC-SGDVADFQFLKHH 88

Query: 75  LEK------------KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           +++            KL  +      + +   +  R++          + A+    +   
Sbjct: 89  VKELTHVDNLLSDGFKLSPHALHSWITRILYNRRSRLEPLWNTYLVGGIEANGEPFIGYC 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNSAEEIARK 164
            M  V   EN  +A G G   A    R    +  +N  + I  +
Sbjct: 149 NMLGVSFSEN-YVATGFGAYLATPILRECLEIKAKNDPKNITEE 191


>gi|47216874|emb|CAG11681.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 180

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 51/159 (32%), Gaps = 11/159 (6%)

Query: 38  GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW 97
           G+ V      KV ++         AGS ADA  + +  + +L  +  Q+    + ++   
Sbjct: 3   GEYVSSKTINKVIKVHDRIFCC-MAGSLADAQAVTKAAKFQLSFHSIQMETPPLVISAAS 61

Query: 98  ----RMDKYLRNLEAMILIADKTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
                  +    L+A  + A         V       +     V   GSG ++      A
Sbjct: 62  VLKELCYQNKEELQAGFITAGWDSRDGPQVYVVSLGGMLLRQPVTIGGSGSTFIYGYVDA 121

Query: 151 LMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLK 186
                 S EE    A  A+++A      +     L  + 
Sbjct: 122 KYKPNMSREECLQFATNALALAMGRDNVSGGVANLVVIT 160


>gi|193666831|ref|XP_001943723.1| PREDICTED: proteasome subunit alpha type-4-like [Acyrthosiphon
           pisum]
          Length = 271

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 21/195 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L    +   AG    +    + 
Sbjct: 30  HAGTCLGILTNDGVLLAAEKRNVNKLLDETCGSEKIYKLNDDMVCSVAGITADANVLVSE 89

Query: 72  LERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++        +          ++ + +      R     IL           +  
Sbjct: 90  LRSISERYRMQYGDSIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDSHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMS---IAADICVY 175
                         IG+  + A+++ +          + A+++A K +S    A  +   
Sbjct: 150 SDPSGNYCGWKATCIGTNSAAAIASLKTEYKEGQMTLDEAKKLAVKILSKTLDATKL--- 206

Query: 176 TNHNIVLETLKVGDE 190
           T   + + TLK   +
Sbjct: 207 TADKVEMATLKRESD 221


>gi|47227266|emb|CAF96815.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 241

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +   +  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPNSIEKIVEIDSHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETLTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + ++  + +++I
Sbjct: 152 QLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKDAIKSSLTI 201


>gi|145490251|ref|XP_001431126.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398229|emb|CAK63728.1| unnamed protein product [Paramecium tetraurelia]
          Length = 243

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 59/195 (30%), Gaps = 23/195 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             + L ++ +  VV+AG+ +++    +   +  K+  +    I    +G   DA TL+E 
Sbjct: 34  GASALAIKVNDGVVLAGERKLNS-TLLEPRSIEKIYEIDTH-IACTASGFIPDARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELA---------------KDWRMDKYLRNLEAMILIAD--KTI 117
              + + +           A                     K  R     +LIA      
Sbjct: 92  ARVESQNHKFNYGEPINVRALTQIVCDQALDFGESDSKSKTKMSRPYGVALLIAGVSDHG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
             +          E     IG+      S  +       +   AE +A   +    +  +
Sbjct: 152 PQIYQTDPTGTMIEYQAKGIGAADEGIQSILKEQYKQDLTLEQAERLAILCLKNVMEEKI 211

Query: 175 YTNHNIVLETLKVGD 189
             N N+ L  +   +
Sbjct: 212 -NNSNVELAVITTAE 225


>gi|5833206|gb|AAD53404.1|AF126260_1 alpha-1 subunit of 20S proteasome [Haloferax volcanii DS2]
          Length = 252

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 56/190 (29%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR    VV+A D + S    +   +  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGTASIGVRTPEGVVLAADKR-SRSPLMEPTSVEKIHKADDHIGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQLLRSS------VELAKDWRMDKYLRNLEAMILI-----ADKTITLVIT 122
               + +    +            E+    +    +       +       +     +  
Sbjct: 93  FARHQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGVENGTPRLYE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS-IAADICVYTN-HNI 180
                   E   ++IG+                 + +E    A+  IA+     T    +
Sbjct: 153 TDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLDEGIELALEAIASTSDEGTAPDGV 212

Query: 181 VLETLKVGDE 190
            + T+    E
Sbjct: 213 DVATVSAETE 222


>gi|91095213|ref|XP_968869.1| PREDICTED: similar to proteasome subunit beta type 6 [Tribolium
           castaneum]
          Length = 181

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 9/117 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M   H       T+I+    +G V+I  D + + G  +      K+ ++         +G
Sbjct: 17  MNAAHS----TGTSIMAAEFNGGVIIGADSRTTTGAYIANRVTDKLTKVTDHIYCC-RSG 71

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKT 116
           S+AD   + + +   L  +  +L    +              Y  +L A IL+A   
Sbjct: 72  SAADTQAIADIVAYHLSFHGMELGEEPLVETGAAVFRELCYNYRDSLMAGILVAGWD 128


>gi|88603528|ref|YP_503706.1| proteasome subunit alpha [Methanospirillum hungatei JF-1]
 gi|88188990|gb|ABD41987.1| Proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
          Length = 239

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 60/193 (31%), Gaps = 21/193 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
             TT + ++    VV+  D +++  + +   +  K+ R+ +   +A  G  G +      
Sbjct: 34  RGTTAVGIKCQEGVVLIVDKRINS-RLLEANSIEKIFRIDEHIGVASSGLVGDARALVDR 92

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR--------NLEAMILIADKTITL-VIT 122
              +E ++ +           LAK                    A+++         +  
Sbjct: 93  AR-IEAQINRVTYDEPIDVETLAKKLGDHMQTYTQFGGARPYGTALLITGISDGQFRLFE 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAAD--ICVYTN 177
                   E     IG+G    +       + +     A  +  KA+  A +    V T 
Sbjct: 152 TDPSGTLLEYKATGIGTGRPAVMKLFEEEYTHECSIKDAITLGLKALHEATEGKFDVNT- 210

Query: 178 HNIVLETLKVGDE 190
             + +  +   +E
Sbjct: 211 --VEIGVITREEE 221


>gi|195123867|ref|XP_002006423.1| GI18573 [Drosophila mojavensis]
 gi|193911491|gb|EDW10358.1| GI18573 [Drosophila mojavensis]
          Length = 245

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 28/189 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    ++     K+ ++      A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTKDSVVLAVEKRITS-PMMVPKTVEKIVKVDDHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKTI- 117
              + + +      S    +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNESMTVESCAQAVSTLAIQFGDSGDGDGASAMSRPFGVAILFAGIENG 151

Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
              +               AIGSG   A    +   + + +        ++ A  +C+ T
Sbjct: 152 EPQLWHMDPSGTYIRYSAKAIGSGSEGAQQNLQDKYTPEMT--------LNDAITLCLNT 203

Query: 177 NHNIVLETL 185
              ++ E L
Sbjct: 204 LKQVMEEKL 212


>gi|195437296|ref|XP_002066576.1| GK24489 [Drosophila willistoni]
 gi|194162661|gb|EDW77562.1| GK24489 [Drosophila willistoni]
          Length = 210

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 52/163 (31%), Gaps = 14/163 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V++A D   +     MK +  K+ RL   +++A   G   D     + + 
Sbjct: 5   TILGIKGRDFVMLASDTMQAKSLIFMKDDQSKIHRLSDFSMMAT-VGDGGDTIQFSDYIS 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADKTI--TLVITGMGD 126
           K L  Y           A      K L        R   AM+L          +      
Sbjct: 64  KNLHLYKISNGYHLSPKAAAHFTRKNLADYLRTNTRYQVAMLLAGYDESEGPDLHYIDSY 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                      G G  +  S  +     Q +   A EI +K++
Sbjct: 124 GASQSINHAGHGWGSIFCGSILQRYWHQQLTQQEAYEILKKSV 166


>gi|226487134|emb|CAX75432.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
           japonicum]
          Length = 247

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 16/164 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+A D  VS G      +  ++ ++ +  ++   +G  AD   L   
Sbjct: 30  GTSVIGIKYKDGVVLAADLLVSYGSLAKYMDFERMFKVNESTVMCC-SGDVADFQFLKHH 88

Query: 75  LEK------------KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           +++            KL  +      + +   +  R++          + A+    +   
Sbjct: 89  VKELTHVDNLLSDGFKLSPHALHSWITRILYNRRSRLEPLWNTYLVGGIEANGEPFIGYC 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNSAEEIARK 164
            M  V   EN  +A G G   A    R    +  +N  + I  +
Sbjct: 149 NMLGVSFSEN-YVATGFGAYLATPILRECLEIKAKNDPKNITEE 191


>gi|50285089|ref|XP_444973.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524275|emb|CAG57866.1| unnamed protein product [Candida glabrata]
          Length = 265

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 72/207 (34%), Gaps = 25/207 (12%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T++++++ +  VVIA D   + G  +      ++  +G+  I+ G +G 
Sbjct: 31  MNTQDPI-VTGTSVISMKYNNGVVIAADNLAAYGSLLRFNGVERLIPVGENTIV-GVSGD 88

Query: 65  SADAFTLLERL-EKKLEQYPNQLLRS----------SVELAKDW--RMDKYLRNLEAMIL 111
            +D   +   L E K+E   +                  LA     R  K      A+I+
Sbjct: 89  VSDMQHIEYLLDEMKIENNYDNSSPDDEEALQPSYVFEYLAAVMYQRRSKMDPLWNAVIV 148

Query: 112 IADKTI--TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEEI 161
              +      +       +   +  +A G G   A+   R ++  +          AE+ 
Sbjct: 149 AGIEKDGSPFLRYVNLLGVTYSSPTLATGFGAHLAIPLLRRVIDKETDIEKTDLALAEQT 208

Query: 162 ARKAMSIAADICVYTNHNIVLETLKVG 188
            R++M +       ++    L  +   
Sbjct: 209 IRESMKVLFYRDARSSKKYSLAIIDKD 235


>gi|226487136|emb|CAX75433.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
           japonicum]
 gi|226487138|emb|CAX75434.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
           japonicum]
 gi|226487140|emb|CAX75435.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
           japonicum]
          Length = 247

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 16/164 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+A D  VS G      +  ++ ++ +  ++   +G  AD   L   
Sbjct: 30  GTSVIGIKYKDGVVLAADLLVSYGSLAKYMDFERMFKVNESTVMCC-SGDVADFQFLKHH 88

Query: 75  LEK------------KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           +++            KL  +      + +   +  R++          + A+    +   
Sbjct: 89  VKELTHVDNLLSDGFKLSPHALHSWITRILYNRRSRLEPLWNTYLVGGIEANGEPFIGYC 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNSAEEIARK 164
            M  V   EN  +A G G   A    R    +  +N  + I  +
Sbjct: 149 NMLGVSFSEN-YVATGFGAYLATPILRECLEIKAKNDPKNITEE 191


>gi|225710708|gb|ACO11200.1| Proteasome subunit beta type-4 precursor [Caligus rogercresseyi]
          Length = 258

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 46/123 (37%), Gaps = 3/123 (2%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +++  ++ +G V++  D  VS G+        ++ ++ +  +I      +         
Sbjct: 45  GSSVFGIKYEGGVLLGADTLVSYGKMARYPGTPRLYKVNETTVITCSGDFADFQCITALV 104

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
              ++E+            +    + +YL NL +     D   T ++ G     EP  G 
Sbjct: 105 ERMQIEEERTNNEVVMQPRSLHRYLTRYLYNLRSKF---DPKWTNIVVGGLQDGEPYLGY 161

Query: 135 MAI 137
           +++
Sbjct: 162 VSM 164


>gi|50421075|ref|XP_459082.1| DEHA2D13904p [Debaryomyces hansenii CBS767]
 gi|49654749|emb|CAG87250.1| DEHA2D13904p [Debaryomyces hansenii]
          Length = 194

 Score = 58.8 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 16/165 (9%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R     +IA     + G +V+K    K R+L   N++A F G + D     E ++ 
Sbjct: 4   ILGIRVQDSTIIATSKAATRGISVLKDTDDKTRKLNTHNLVA-FTGEAGDTVQFAEYIQA 62

Query: 78  KLEQYPNQLL------------RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
            ++ +  +                +           Y  N+       +     +     
Sbjct: 63  NIQLHTMRENDVELSPKATASFVRNQLATSIRSRKPYQVNVLIGGYDVNNDQPSLNWIDY 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
              + E    A G    Y  S            +E   + ++ + 
Sbjct: 123 LGTQVELPYAAHGYAAFYCTSLLDRHYRKDMKFDEGLKLLKECLK 167


>gi|226470558|emb|CAX70559.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
           japonicum]
          Length = 247

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 16/164 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+A D  VS G      +  ++ ++ +  ++   +G  AD   L   
Sbjct: 30  GTSVIGIKYKDGVVLAADLLVSYGSLAKYMDFERMFKVNESTVMCC-SGDVADFQFLKHH 88

Query: 75  LEK------------KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           +++            KL  +      + +   +  R++          + A+    +   
Sbjct: 89  VKELTHVDNLLSDGFKLSPHALHSWITRILYNRRSRLEPLWNTYLVGGIEANGEPFIGYC 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAAR--ALMSTQNSAEEIARK 164
            M  V   EN  +A G G   A    R    +  +N  + I  +
Sbjct: 149 NMLGVSFSEN-YVATGFGAYLATPILRECLEIKAKNDPKNITEE 191


>gi|219115922|ref|XP_002178756.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409523|gb|EEC49454.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 199

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 13/162 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+  V+ +G V++A D Q +    ++        +    +   G +G + D     E + 
Sbjct: 3   TVFGVQYEGGVILAAD-QSNARSILLYQTNLDKVKELTSHSAMGVSGPNCDMVNFCEFVA 61

Query: 77  KKLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDV 127
           K ++ Y           A+           + K    +  ++   D  +   +       
Sbjct: 62  KNIKLYELSNDIKLSTHAQANFARGELATALRKGPFQVNTLLGGFDNKVGASLYYLDYMA 121

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
              +    + G   ++ LS              A +I  + +
Sbjct: 122 ALQKVNYGSQGYASNFCLSIMDKEYRDDLNEADAVKIVEQCI 163


>gi|291230976|ref|XP_002735446.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 180

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/128 (11%), Positives = 33/128 (25%), Gaps = 18/128 (14%)

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD------KTITLVITGMGDVLEPEN 132
           + +  +    S   +A       Y R      +         +    V +          
Sbjct: 41  MYKNDHHKEMSCPAIAAMISTILYYRRFFPYYVYNIVAGLDTEGKGCVYSYDPVGSYERE 100

Query: 133 GVMAIGSGGSYALSAARA--LMSTQ----------NSAEEIARKAMSIAADICVYTNHNI 180
              + GS  +              Q          + A  +A+     AA+  +YT  +I
Sbjct: 101 SYRSAGSASAMLQPLLDNQIGFKNQEGVEQVALSRDKAVNLAKDVFISAAERDIYTGDSI 160

Query: 181 VLETLKVG 188
           ++  +   
Sbjct: 161 IINVIDKN 168


>gi|270015986|gb|EFA12434.1| hypothetical protein TcasGA2_TC016019 [Tribolium castaneum]
          Length = 169

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 9/117 (7%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M   H       T+I+    +G V+I  D + + G  +      K+ ++         +G
Sbjct: 17  MNAAHS----TGTSIMAAEFNGGVIIGADSRTTTGAYIANRVTDKLTKVTDHIYCC-RSG 71

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADKT 116
           S+AD   + + +   L  +  +L    +              Y  +L A IL+A   
Sbjct: 72  SAADTQAIADIVAYHLSFHGMELGEEPLVETGAAVFRELCYNYRDSLMAGILVAGWD 128


>gi|168016366|ref|XP_001760720.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688080|gb|EDQ74459.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 221

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 13/183 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I  +  DG  ++  D        V K N  K+  L    ++ G  G S D     E ++K
Sbjct: 4   IFGLVGDGFALLVADTSQVQSIVVQKTNEDKIMILDSHKLL-GVTGESGDRVQFSEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K    +  MI   +K     +        
Sbjct: 63  NILLYQYRNGIPLSTAAAANFTRGELATALRKSPYQVNMMIAGWEKDQGPSLYYLDYIST 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +     +G G  + LS          S   A E+  K +       V +  N +++ +
Sbjct: 123 LHKLEKGGMGYGAYFLLSLMDRYYEKNMSLEKALELVDKCIKEVRSRLVASPPNFIVKIV 182

Query: 186 KVG 188
              
Sbjct: 183 DKD 185


>gi|167526395|ref|XP_001747531.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773977|gb|EDQ87611.1| predicted protein [Monosiga brevicollis MX1]
          Length = 248

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 65/198 (32%), Gaps = 27/198 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V+IA + +++    +  ++  K+  +      A  +G +ADA TL+ER
Sbjct: 34  GSTAIGIQTKEGVIIAVEKRITS-PLMDPSSIEKIVEIDSHIACA-MSGLTADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK---------------YLRNLEAMILIADKT--- 116
              + + Y           +    +                   R     +L A      
Sbjct: 92  ARVEAQNYWFTYNEPMSVESVTQAVCNLAMQFGEGEDAESGSMSRPFGVALLFAGVDTEG 151

Query: 117 ---ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
                ++               AIGSG   A S  +       S   AE +A   +    
Sbjct: 152 TDKRPVLYHADPSGTFIRFDAKAIGSGSQGAQSTLQEKYDATMSFADAETLALSTLKQVM 211

Query: 171 DICVYTNHNIVLETLKVG 188
           +  V T+ N+ +  +K  
Sbjct: 212 E-EVITSKNVEVAAVKAD 228


>gi|309262253|ref|XP_003085765.1| PREDICTED: proteasome subunit alpha type-5-like [Mus musculus]
 gi|148689471|gb|EDL21418.1| mCG13747 [Mus musculus]
          Length = 241

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 201


>gi|256081367|ref|XP_002576942.1| proteasome subunit beta 4 (T01 family) [Schistosoma mansoni]
 gi|238662232|emb|CAZ33179.1| proteasome subunit beta 4 (T01 family) [Schistosoma mansoni]
          Length = 247

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 61/173 (35%), Gaps = 20/173 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+A D  VS G      +  ++ ++ +  ++   +G  AD   L   
Sbjct: 30  GTSVIGIKYRNGVVLAADMLVSYGSLAKYMDFERMFKVNQSTVMCC-SGDVADFQFLKHH 88

Query: 75  LEK------------KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           +E+            +L  +      + V   +  R+           L A+    +   
Sbjct: 89  IEELTHQDSLLSDGFRLSPHALHSWITRVLYNRRSRLQPLWNTCLVGGLEANGEPFIGYC 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAAR------ALMSTQNSAEEIARKAMSIA 169
            M  V   EN  +A G G   A+   R      A     N  EE A   M+ A
Sbjct: 149 SMLGVSFTEN-YVATGFGAYLAMPILRECLEIKAGGDPNNITEEDAISTMTSA 200


>gi|16943777|emb|CAD10778.1| 20S proteasome subunit alpha V [Physcomitrella patens]
          Length = 237

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 20/187 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +   +  K+  + +    A  +G +ADA TL+E 
Sbjct: 34  GSTAVGLKTKEGVVLAVEKRITS-VLLEPTSVEKIMEIDEHIGCA-MSGLTADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D++   +
Sbjct: 92  GRVETQNHRFSYNEPMSVESTTQALCDLALRFGEFDEESMSRPFGVSLLIAGHDESGPCL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A ++ +   +   +   AE +A   +    +  V T+
Sbjct: 152 YHTDPSGTFWQCDAKAIGSGSEGADTSLQEHFNKNMTLEEAETLALSTLKHVMEEKV-TS 210

Query: 178 HNIVLET 184
            N+ +  
Sbjct: 211 CNVDIAK 217


>gi|242054733|ref|XP_002456512.1| hypothetical protein SORBIDRAFT_03g037640 [Sorghum bicolor]
 gi|241928487|gb|EES01632.1| hypothetical protein SORBIDRAFT_03g037640 [Sorghum bicolor]
          Length = 249

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 60/164 (36%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ TI+ ++    +V+  +  V+  + +++ + R++  +   + +A  AG +AD   ++ 
Sbjct: 33  NSGTIVGIKCKDGIVLGVEKLVTS-KMILEGSNRRIHSVHHHSGLA-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RTKSEAASYEKVYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                +  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|147225180|emb|CAN13312.1| proteasome (prosome, macropain) subunit, beta type, 9 (large
           multifunctional protease 2) [Sus scrofa]
          Length = 100

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 5/101 (4%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V  DG VV+  D +VS G+ V+     K+  L      A  +GS+ADA  + +    +
Sbjct: 1   MAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHHRIYCA-LSGSAADAQAIADMAAYQ 59

Query: 79  LEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIADK 115
           LE +  +L    + LA          KY  +L A +++A  
Sbjct: 60  LELHGMELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGW 100


>gi|54696298|gb|AAV38521.1| proteasome (prosome, macropain) subunit, alpha type, 5 [synthetic
           construct]
 gi|61367252|gb|AAX42972.1| proteasome subunit alpha type 5 [synthetic construct]
          Length = 242

 Score = 58.8 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 201


>gi|332375913|gb|AEE63097.1| unknown [Dendroctonus ponderosae]
          Length = 232

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 53/167 (31%), Gaps = 14/167 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T+++ +  +  +V+AGD   S G     +N  ++ ++    ++A     +   F      
Sbjct: 22  TSLVALTYNNGIVVAGDLLASYGSLARYSNCPRIVKINNNLLLAASGDYADFQFVKNLVE 81

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD-------KTITLVITGMGD 126
           +K + +       S    A    + +  Y R  +   L  +            + T    
Sbjct: 82  QKVISEECLDDGLSLKPKALYCWLTRVLYNRRSQMDPLWNNFIIAGIQDGEPFLGTVDKQ 141

Query: 127 VLEPENGVMAIGSGGSYALSAARALMST----QN-SAEEIARKAMSI 168
               E+  +  G G   A    R ++          A     + M +
Sbjct: 142 GTAYEDKAICTGYGAHIATPLLRDVLDKTSQLDMAEARAQVARCMEV 188


>gi|119576786|gb|EAW56382.1| proteasome (prosome, macropain) subunit, alpha type, 5, isoform
           CRA_b [Homo sapiens]
          Length = 270

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 58/172 (33%), Gaps = 18/172 (10%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+
Sbjct: 22  WLGSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLI 79

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKT 116
           ++   + + +      +    +    +                  R     +L    D+ 
Sbjct: 80  DKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEK 139

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 140 GPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 191


>gi|45387823|ref|NP_991271.1| proteasome subunit alpha type-5 [Danio rerio]
 gi|37681911|gb|AAQ97833.1| proteasome subunit, alpha type, 5 [Danio rerio]
 gi|47938031|gb|AAH71495.1| Proteasome (prosome, macropain) subunit, alpha type,5 [Danio rerio]
          Length = 241

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 59/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDSHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + ++  + +++I
Sbjct: 152 QLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKDAIKSSLTI 201


>gi|91080807|ref|XP_969972.1| PREDICTED: similar to proteasome alpha 3 subunit [Tribolium
           castaneum]
 gi|270005897|gb|EFA02345.1| hypothetical protein TcasGA2_TC008015 [Tribolium castaneum]
          Length = 254

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 62/166 (37%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ +R    VV+A +  V + +       +++  + +   +A F+G  ADA  +++
Sbjct: 33  NSGTVIGLRGKDGVVLAAEKLV-MSKLHEPGTNKRIFNVDRHVGMA-FSGLIADARQIVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
              ++   Y +Q   S      + R+  Y+                ++    +    + T
Sbjct: 91  IARREAANYRSQYGVSIPLNYLNDRVSMYMHAYTLYSAVRPYGCSVILASCGEEGPTMYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG     A +    L  +  +  E+ ++A  I
Sbjct: 151 IDPSGVSYGYHGCAIGKAKQSAKTEIEKLKLSGMTCRELVKEAAKI 196


>gi|312198571|ref|YP_004018632.1| hypothetical protein FraEuI1c_4772 [Frankia sp. EuI1c]
 gi|311229907|gb|ADP82762.1| hypothetical protein FraEuI1c_4772 [Frankia sp. EuI1c]
          Length = 182

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 52/165 (31%), Gaps = 13/165 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T I+ V  +G VVI GD     G +V      KV R   G  I GF  S      L   L
Sbjct: 2   TCIVGVEYNGRVVIGGDSAGVAGWSVTVRADTKVFR--NGAYIMGFTDSFRMGQLLRYSL 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE---- 131
              +    +     + E     R               +     ++   G +   +    
Sbjct: 60  VPPMPHTWDLDRFMATEFVAAVRDCLRDGGYARNDSGNESGGQFLVGIQGRLYRIDSDFQ 119

Query: 132 -----NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
                +   A+G+G  +A  +           +   RKA++ AA 
Sbjct: 120 IGRSVDDYQAVGAGEDFARGSLHTSA--DQPPDYRVRKALAAAAH 162


>gi|170042005|ref|XP_001848734.1| proteasome subunit alpha type 7-1 [Culex quinquefasciatus]
 gi|167865546|gb|EDS28929.1| proteasome subunit alpha type 7-1 [Culex quinquefasciatus]
          Length = 249

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + S+ +   +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGKDVVVLGVEKK-SVAKLQEERTVRKICLLDDH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R    L + +      R      LI          + 
Sbjct: 88  RAQVECQSHKLNVEDPVTLEYITRFIAGLKQKYTQSNGRRPFGISCLIGGFDYDGLPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                 +  E    A G              + +       A ++A KA+
Sbjct: 148 QTEPSGIYYEWKANATGRSAKTVREFLEKYYTPELVESEEGAIKLAIKAL 197


>gi|7106387|ref|NP_036097.1| proteasome subunit alpha type-5 [Mus musculus]
 gi|23110942|ref|NP_002781.2| proteasome subunit alpha type-5 isoform 1 [Homo sapiens]
 gi|62751982|ref|NP_001015566.1| proteasome subunit alpha type-5 [Bos taurus]
 gi|222136590|ref|NP_001138373.1| proteasome subunit alpha type-5 [Sus scrofa]
 gi|73959335|ref|XP_547244.2| PREDICTED: similar to Proteasome subunit alpha type 5 (Proteasome
           zeta chain) (Macropain zeta chain) (Multicatalytic
           endopeptidase complex zeta chain) isoform 1 [Canis
           familiaris]
 gi|109013215|ref|XP_001090512.1| PREDICTED: proteasome subunit alpha type-5 [Macaca mulatta]
 gi|194211033|ref|XP_001918089.1| PREDICTED: similar to zeta proteasome chain; PSMA5 [Equus caballus]
 gi|296208738|ref|XP_002751222.1| PREDICTED: proteasome subunit alpha type-5-like isoform 1
           [Callithrix jacchus]
 gi|297664206|ref|XP_002810542.1| PREDICTED: proteasome subunit alpha type-5-like [Pongo abelii]
 gi|301767678|ref|XP_002919250.1| PREDICTED: proteasome subunit alpha type-5-like [Ailuropoda
           melanoleuca]
 gi|332237497|ref|XP_003267940.1| PREDICTED: proteasome subunit alpha type-5-like isoform 1 [Nomascus
           leucogenys]
 gi|12229953|sp|Q9Z2U1|PSA5_MOUSE RecName: Full=Proteasome subunit alpha type-5; AltName:
           Full=Macropain zeta chain; AltName: Full=Multicatalytic
           endopeptidase complex zeta chain; AltName:
           Full=Proteasome zeta chain
 gi|38258905|sp|P28066|PSA5_HUMAN RecName: Full=Proteasome subunit alpha type-5; AltName:
           Full=Macropain zeta chain; AltName: Full=Multicatalytic
           endopeptidase complex zeta chain; AltName:
           Full=Proteasome zeta chain
 gi|75060919|sp|Q5E987|PSA5_BOVIN RecName: Full=Proteasome subunit alpha type-5
 gi|3805976|gb|AAC69149.1| zeta proteasome chain [Mus musculus]
 gi|14715088|gb|AAH10709.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Mus
           musculus]
 gi|38014563|gb|AAH60575.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Rattus
           norvegicus]
 gi|48145811|emb|CAG33128.1| PSMA5 [Homo sapiens]
 gi|53734656|gb|AAH83342.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Mus
           musculus]
 gi|55663929|emb|CAH70887.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
           sapiens]
 gi|55959330|emb|CAI13171.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
           sapiens]
 gi|59858431|gb|AAX09050.1| proteasome alpha 5 subunit [Bos taurus]
 gi|74137676|dbj|BAE35866.1| unnamed protein product [Mus musculus]
 gi|74179944|dbj|BAE36528.1| unnamed protein product [Mus musculus]
 gi|74228645|dbj|BAE25389.1| unnamed protein product [Mus musculus]
 gi|74353432|gb|AAI03752.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
           sapiens]
 gi|74354487|gb|AAI02020.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
           sapiens]
 gi|74354509|gb|AAI02021.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
           sapiens]
 gi|74354585|gb|AAI02344.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Bos taurus]
 gi|74355765|gb|AAI02019.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
           sapiens]
 gi|80478701|gb|AAI08369.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Mus
           musculus]
 gi|119576785|gb|EAW56381.1| proteasome (prosome, macropain) subunit, alpha type, 5, isoform
           CRA_a [Homo sapiens]
 gi|123122317|emb|CAM19481.1| proteasome (prosome, macropain) subunit, alpha type 5 [Mus
           musculus]
 gi|123122760|emb|CAM27268.1| proteasome (prosome, macropain) subunit, alpha type 5 [Mus
           musculus]
 gi|148670013|gb|EDL01960.1| mCG4051 [Mus musculus]
 gi|149025685|gb|EDL81928.1| proteasome (prosome, macropain) subunit, alpha type 5, isoform
           CRA_a [Rattus norvegicus]
 gi|189053884|dbj|BAG36153.1| unnamed protein product [Homo sapiens]
 gi|261860718|dbj|BAI46881.1| proteasome (prosome, macropain) subunit, alpha type, 5 [synthetic
           construct]
 gi|296489341|gb|DAA31454.1| proteasome alpha 5 subunit [Bos taurus]
          Length = 241

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 201


>gi|326936240|ref|XP_003214164.1| PREDICTED: proteasome subunit alpha type-5-like, partial [Meleagris
           gallopavo]
          Length = 231

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 24  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDSHIGCA-MSGLIADAKTLIDK 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 82  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 141

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 142 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLVI 191


>gi|323452552|gb|EGB08426.1| hypothetical protein AURANDRAFT_60080 [Aureococcus anophagefferens]
          Length = 247

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 66/197 (33%), Gaps = 26/197 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    +  ++  KV  +      A  +G  ADA TL++ 
Sbjct: 34  GSTSIGIKTADGVVLAVEKRVTS-TLMESSSIEKVMEIDSHCG-AAMSGLIADARTLVDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM------------------DKYLRNLEAMILIA--D 114
              + + +           A    +                   K  R     +L+A  D
Sbjct: 92  ARVEAQNHRFTYDEPMPTTALTQSVCDLALSFGEDSEEREGGGSKMSRPFGVALLVAGYD 151

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                +          +    A+GSGG  A S  +   S   S   AE +A   +    +
Sbjct: 152 DDGAQLYYADPSGTFTQYKAKAMGSGGEGAQSNLQESYSESMSFADAEVLALSTLKQVME 211

Query: 172 ICVYTNHNIVLETLKVG 188
               T  N+ + ++   
Sbjct: 212 -DKLTTDNVDVASVTKD 227


>gi|156717484|ref|NP_001096282.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Xenopus
           (Silurana) tropicalis]
 gi|134025463|gb|AAI35541.1| LOC100124849 protein [Xenopus (Silurana) tropicalis]
          Length = 241

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 60/170 (35%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILI--ADKTIT 118
              + + +      +    +    +                  R     +L   AD+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGADEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + +++I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLTI 201


>gi|149616489|ref|XP_001516559.1| PREDICTED: similar to zeta proteasome chain; PSMA5, partial
           [Ornithorhynchus anatinus]
          Length = 236

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 24  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 82  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 141

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 142 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 191


>gi|281341626|gb|EFB17210.1| hypothetical protein PANDA_007870 [Ailuropoda melanoleuca]
          Length = 209

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 2   GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 59

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 60  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 119

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 120 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 169


>gi|291398347|ref|XP_002715852.1| PREDICTED: proteasome alpha 5 subunit [Oryctolagus cuniculus]
          Length = 241

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTAEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 201


>gi|260947434|ref|XP_002618014.1| hypothetical protein CLUG_01473 [Clavispora lusitaniae ATCC 42720]
 gi|238847886|gb|EEQ37350.1| hypothetical protein CLUG_01473 [Clavispora lusitaniae ATCC 42720]
          Length = 231

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 57/166 (34%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    +V+A +  ++    V   N ++++ + +   +A ++G   D    ++
Sbjct: 6   NGGTSIGIKAKDGIVLAVEKIINSKLLVPGRN-KRIQTIDRHVGVA-YSGLLPDGRHFVK 63

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTITLVIT 122
           R   + + + +             R+  Y++              +++   D+    +  
Sbjct: 64  RGRDEAQSFRSLYKTPVSLPYLMDRLGLYVQMYTCYNSVRPFGVSSIVGGMDENGPHLYM 123

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A G G   A S    L   Q +A E  + A  I
Sbjct: 124 VEPSGTYWGYTGAATGRGRQTAKSELEKLDFEQLTAREAVKHAARI 169


>gi|229367530|gb|ACQ58745.1| Proteasome subunit alpha type-5 [Anoplopoma fimbria]
          Length = 241

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +   +  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPNSIEKIVEIDTHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + ++  + +++I
Sbjct: 152 QLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKDAIKSSLTI 201


>gi|320581587|gb|EFW95807.1| Alpha 3 subunit of the 20S proteasome [Pichia angusta DL-1]
          Length = 252

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + V     VV+A + +V+        +A K+  L    +   AG    +      
Sbjct: 30  HAGTAIGVMAKDGVVLAAERKVTSKLLEQDTSAEKMYVLNDKTVCAVAGMTADAGILINS 89

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
           +    ++  +   +      L++   ++ + +     LR      + A   D+    + T
Sbjct: 90  IRYSAQQYLKTYGEDIPIETLVKRICDVKQGYTQHGGLRPFGVSFIFAGYDDRYGFQLYT 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                        +IG+  + A +  +       + EE   +A K +S   D    T+  
Sbjct: 150 SNPSGNYSGWKATSIGANNTSAQTLLKQDYKDGMTLEEAQNLALKVLSKTTDSNKLTSEK 209

Query: 180 IVLETLKVG 188
           +   T+ + 
Sbjct: 210 VEFSTIGLD 218


>gi|303389207|ref|XP_003072836.1| proteasome type-4 subunit beta [Encephalitozoon intestinalis ATCC
           50506]
 gi|303301979|gb|ADM11476.1| proteasome type-4 subunit beta [Encephalitozoon intestinalis ATCC
           50506]
          Length = 235

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 57/180 (31%), Gaps = 22/180 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++++ R    +++  D + S G+       +++ + G    + G +G  +D   L++ 
Sbjct: 16  GTSVVSFRYKDGIIMGADAKASYGRLTKFNGVQRMFKFGS-RTLVGISGEVSDMQYLIKT 74

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------------DKTITL 119
           L    E+   ++            +      +  + L                 +     
Sbjct: 75  LNILTEEDNREIDPKGYHKMVQRILYSARSRISPLNLSVCVGGVKTVRNSEEEFETNEKT 134

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADIC 173
           +           + V+  G G   AL   R+ +       T+  A  +  +AM I     
Sbjct: 135 LGCVDRLGNFYFSDVICTGIGSYLALPFLRSKVEGREQEITREEAIRLVEEAMEILCYRD 194


>gi|296412651|ref|XP_002836036.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629836|emb|CAZ80193.1| unnamed protein product [Tuber melanosporum]
          Length = 285

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 50/166 (30%), Gaps = 12/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +     V+ +N +++  +     IA              
Sbjct: 53  NGGTAIGIRCKDGVVLAVEKLIGSKLLVLGSN-KRIASVDSHIGIACSGLIPDARHFTSR 111

Query: 74  RLEK---KLEQYPNQLLR-----SSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
              +     + Y + +       +    A+ + +   +R      +I          +  
Sbjct: 112 ARSEASNWRKLYRSPIPISSMADAMGGYAQAYTLYSSVRPFGVTAIIGGMDEAGGPGLWM 171

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       A G G   A +    L     + EE  R+A  I
Sbjct: 172 VEPSGVGWGYFGAATGRGRQAAKAELEKLPLPNITVEEAVRQAARI 217


>gi|118101652|ref|XP_417777.2| PREDICTED: similar to MGC84496 protein [Gallus gallus]
          Length = 201

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 51/162 (31%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ ++ +  ++    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVAADTVAASSIVQMKHDHDKMFKMSEKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAM------ILIADKTITLVITGMGDVL 128
           ++ Y  +        A      +    YLR+              D     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDDHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A E+ +K + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYKPGITREEAVELLKKCLE 165


>gi|50080306|gb|AAT69640.1| putative proteasome subunit alpha type 3 [Oryza sativa Japonica
           Group]
 gi|215768678|dbj|BAH00907.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218197017|gb|EEC79444.1| hypothetical protein OsI_20428 [Oryza sativa Indica Group]
 gi|222632058|gb|EEE64190.1| hypothetical protein OsJ_19022 [Oryza sativa Japonica Group]
          Length = 249

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 61/164 (37%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  V+  + ++K + R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVLGVEKLVTS-KMILKGSNRRLHSVHRHSGLA-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEAASYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                L  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGLSYKYFGAALGKGRQAAKTEIEKLNLSELTCREGIVEVA 194


>gi|51968292|dbj|BAD42871.1| 20S proteasome alpha5 subunit [Xenopus laevis]
          Length = 241

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 60/170 (35%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTAEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILI--ADKTIT 118
              + + +      +    +    +                  R     +L   AD+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGADEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + +++I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLTI 201


>gi|126459549|ref|YP_001055827.1| proteasome subunit alpha [Pyrobaculum calidifontis JCM 11548]
 gi|126249270|gb|ABO08361.1| transcriptional regulator, Fis family [Pyrobaculum calidifontis JCM
           11548]
          Length = 242

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 14/188 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
                + V+  G VV+A + +  +       +  K+  + +   I  +G    +      
Sbjct: 34  RGWPTVGVKCKGGVVLAAEKR-KISALFDPTSLEKIYLVDEHVAISPSGLLADARILIDY 92

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
              +        ++      L ++   L + +      R     +LIA  D     +   
Sbjct: 93  ARDVALSHRFIYDEPIDVEYLTKAVCNLKQQYTQFGGARPFGVALLIAGIDGRGARLFQT 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNI 180
               +       AIG+  S  +                 E+A +A++ A +I   TN  +
Sbjct: 153 DPSGVYIGYYATAIGADSSTIMEFLEKNYKHDLDIGGCVELAVRALATAVEISDGTNVEV 212

Query: 181 VLETLKVG 188
              T++  
Sbjct: 213 AYATVEEK 220


>gi|212721808|ref|NP_001131770.1| hypothetical protein LOC100193140 [Zea mays]
 gi|194692490|gb|ACF80329.1| unknown [Zea mays]
          Length = 250

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 60/189 (31%), Gaps = 17/189 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A + L +     VV+ G+ +V+        +A K+ ++       +AG    +      
Sbjct: 30  NAGSALGILAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QL++S  +  + +     LR      L A         +  
Sbjct: 90  ARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH--NI 180
                        A+G+    A S  +       + EE    A+ + +     T    ++
Sbjct: 150 SDPSGNYGGWKAAAVGANSQAAQSMLKQDYKDGLTREEAVALALKVLSK----TMDSTSL 205

Query: 181 VLETLKVGD 189
             E L++ +
Sbjct: 206 TAEKLELAE 214


>gi|3122620|sp|Q29576|PSB8_PIG RecName: Full=Proteasome subunit beta type-8; AltName:
           Full=Macropain subunit C13; AltName: Full=Multicatalytic
           endopeptidase complex subunit C13; AltName:
           Full=Proteasome component C13; AltName: Full=Proteasome
           subunit beta-5i
          Length = 104

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 28/104 (26%), Gaps = 10/104 (9%)

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPEN 132
             Y  +        A        +     M L         DK    +     +      
Sbjct: 1   RLYYLRNGARISVSAASKLXSNMMYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSG 60

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADIC 173
            + + GSG +YA     +      S EE   + R+A+  A    
Sbjct: 61  NMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 104


>gi|149632396|ref|XP_001509813.1| PREDICTED: similar to proteasome beta 7 subunit proprotein
           [Ornithorhynchus anatinus]
          Length = 206

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 9/94 (9%)

Query: 99  MDKYLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
           +  Y   + A +++   D T   + +        +   + +GSG   A++          
Sbjct: 59  LGGYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDNFKPDM 118

Query: 157 SAEE---IARKAMSIAADI--CVYTNHNIVLETL 185
             EE   + R A  IAA I   + +  NI L  +
Sbjct: 119 EEEEAKQLVRDA--IAAGIYNDLGSGSNIDLCVI 150


>gi|7527334|dbj|BAA94261.1| proteasome subunit LMP7 [Xenopus laevis]
          Length = 87

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 1/88 (1%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++A D + S G  +    A KV  +    ++   +GS+AD       L K+   Y  +  
Sbjct: 1   IVAVDSRASAGSYIESLKANKVIEINPY-LLGTMSGSAADCQHWERLLAKECRLYQLRNN 59

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADK 115
                 +    +   +       L    
Sbjct: 60  SRISVSSASKLLCNMMLQYRGSGLSVGS 87


>gi|71897167|ref|NP_001026578.1| proteasome subunit alpha type-5 [Gallus gallus]
 gi|311771753|ref|NP_001185745.1| putative proteasome alpha 5 subunit [Taeniopygia guttata]
 gi|53133117|emb|CAG31964.1| hypothetical protein RCJMB04_14i9 [Gallus gallus]
          Length = 241

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDSHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLVI 201


>gi|197129876|gb|ACH46374.1| putative proteasome alpha 5 subunit [Taeniopygia guttata]
          Length = 241

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  ++  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEEIVEIDSHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLVI 201


>gi|149238401|ref|XP_001525077.1| proteasome component PRE4 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451674|gb|EDK45930.1| proteasome component PRE4 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 289

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 64/210 (30%), Gaps = 26/210 (12%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T+++  +    +++A D   S G  +   N +++ R+G   ++ G +G 
Sbjct: 46  MNTQQPI-ITGTSVIASKFSNGIIMAADHVGSYGSLLRFNNIQRLIRVGSETVV-GISGD 103

Query: 65  SADAFTLLERLEKKLEQYPNQLLRS--------SVELAKDWRMDKYLRNLEAMILIA--- 113
            +D   +   L++   +       +        +  + +      Y R  +   L     
Sbjct: 104 ISDLQYIERLLDELEIEEEVYDNEADGANAFLRAPNVHEYLSRVMYNRRSKMNPLWNSIV 163

Query: 114 -----DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS--------AEE 160
                 +    +       +      +A G G   A+   R L+             A +
Sbjct: 164 VGGFDSERKPFLKYVDLLGVTYHASTIATGFGSHLAIPLLRQLIPEDKDYVKVNETEARK 223

Query: 161 IARKAMSIAADICVYTNHNIVLETLKVGDE 190
           +    M +       +        +   DE
Sbjct: 224 VVDDCMRVLFYRDARSGEQFSRVVITFDDE 253


>gi|50304213|ref|XP_452056.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641188|emb|CAH02449.1| KLLA0B11836p [Kluyveromyces lactis]
          Length = 254

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 59/192 (30%), Gaps = 19/192 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + ++    VV+  + + +L     +    K+ ++    +++ FAG +AD+  L+E
Sbjct: 29  RGTCAVGLKGADCVVLGCERRSTLKLQDPRITPSKISKIDNHVVLS-FAGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD-------KTITLV 120
           +   + + +   L            +A   +       +    +               +
Sbjct: 88  KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSVLIAGFDPRDNKPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTN 177
                  +       +IG   +          +        +E  +  +    ++ V T 
Sbjct: 148 YQTEPSGIYSAWCAQSIGRNSNTVREFLEKNYNKNEPPADEKECVKLTIKSLLEV-VQTG 206

Query: 178 -HNIVLETLKVG 188
             NI +  +K  
Sbjct: 207 ARNIEITVVKPD 218


>gi|74137638|dbj|BAE35848.1| unnamed protein product [Mus musculus]
          Length = 241

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQGVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 201


>gi|225462543|ref|XP_002266917.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
 gi|225462545|ref|XP_002266877.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
 gi|147799989|emb|CAN77245.1| hypothetical protein VITISV_018657 [Vitis vinifera]
          Length = 250

 Score = 58.1 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A T + +     VV+ G+ +V+        +  K+ ++        AG    +      
Sbjct: 30  NAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   Y  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         AIG+    A S  +       S E+  + A+ +
Sbjct: 149 MSDPSGNYGGWKAAAIGANNQAAQSMLKQDYKDDISREDAVQLALKV 195


>gi|154343830|ref|XP_001567859.1| proteasome alpha 5 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134065193|emb|CAM40619.1| putative proteasome alpha 5 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 244

 Score = 58.1 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 63/194 (32%), Gaps = 22/194 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T L +R    VV+A + +V     V+ ++  K+  +    I A  +G  ADA  L+E 
Sbjct: 34  GSTSLGIRTPEGVVLAAEKRVPS-NLVISSSMSKIMEIDSH-IAAVMSGMVADARILVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDW--------------RMDKYLRNLEAMILIA--DKTIT 118
              + + +           +                 +     R     +LIA  D+   
Sbjct: 92  ARVESQNHRFTYNEPMHVESCTLATCDLSIQFGESGGKRKLMSRPFGVSLLIAGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +               AIG G   A S          + EE   +A   +    +  + 
Sbjct: 152 QLWQTDPSGTYTRYDAQAIGGGAEAAQSVFTERYHRNMTLEEGETLAVDILRQVMEEHL- 210

Query: 176 TNHNIVLETLKVGD 189
           +  NI +  ++  D
Sbjct: 211 SPENIEVAVVRADD 224


>gi|156837451|ref|XP_001642751.1| hypothetical protein Kpol_380p12 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113315|gb|EDO14893.1| hypothetical protein Kpol_380p12 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 265

 Score = 58.1 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 66/180 (36%), Gaps = 20/180 (11%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
            +    + +  T++++++ +  V+IA D   + G  +   +  ++  +G+  ++ G +G 
Sbjct: 32  MNTQQPI-ITGTSVISMKYNNGVIIAADNLGAYGSLLRFNDVERLFAIGENTVV-GVSGD 89

Query: 65  SADAFTLLERL-EKKLEQYPNQLLRSSVELAK------------DWRMDKYLRNLEAMIL 111
            +D   +   L E ++E   +       E  K              R  K      A+I+
Sbjct: 90  ISDMQYIERLLDELQIENNYDNSTGDGAESLKPSYVFEYLAAVMYSRRSKMNPLWNAIIV 149

Query: 112 IADKTI-TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE----EIARKAM 166
              +     +       +   +  +A G G   A    R ++  +        E A+KA+
Sbjct: 150 AGMEDNKPFLRYVNLLGVTYSSQTLATGFGAHMANPLLRKVVDKEEDVANTDLETAKKAI 209


>gi|297835264|ref|XP_002885514.1| hypothetical protein ARALYDRAFT_898737 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331354|gb|EFH61773.1| hypothetical protein ARALYDRAFT_898737 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 204

 Score = 58.1 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 13/161 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  +G  ++A D        + K N  K+  L    ++A  +G   D     E ++K
Sbjct: 4   VFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAA-SGEPGDRVQFTEYVQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            +  Y  +        A            + K   ++  ++   D      +        
Sbjct: 63  NVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDNESGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
             +    A G G  ++LS       +  S   A E+  K +
Sbjct: 123 LHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCI 163


>gi|6984140|gb|AAF34770.1|AF227625_1 proteasome 27 kDa subunit [Euphorbia esula]
          Length = 242

 Score = 58.1 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 51/167 (30%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A T + +     VV+ G+ +V+        +  K+ ++       +AG    +      
Sbjct: 22  NAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVSCAVAGIMSDANILINT 81

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      + A         + 
Sbjct: 82  AR-VQAQRYYFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFIFAGWDKNFGFQLY 140

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           T             AIG+    A    +     + + EE  + A+ +
Sbjct: 141 TSDPSGNYGGWKAAAIGANNQAAQFMLKQDYKDEITREEAVQLALKV 187


>gi|225706970|gb|ACO09331.1| Proteasome subunit beta type 2 [Osmerus mordax]
          Length = 199

 Score = 58.1 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 54/162 (33%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L +  ++    G + D     E ++K 
Sbjct: 5   IGIQGTDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNLLLAGYDESDGPGLFYMDHLSA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS        + +   A ++ +K + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYRPELTRDEAVDLLKKCVE 165


>gi|195111614|ref|XP_002000373.1| GI22558 [Drosophila mojavensis]
 gi|193916967|gb|EDW15834.1| GI22558 [Drosophila mojavensis]
          Length = 203

 Score = 58.1 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 53/190 (27%), Gaps = 22/190 (11%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
             ++ +R    V I+ D +  L          K+  L     I G  G   D  T+ +RL
Sbjct: 7   GCVIAMRGKDCVAISTDRRFCLPSYTAGEEFEKIFNLAPRLYI-GLTGLQTDILTVQQRL 65

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE---- 131
             +   Y                + + L               ++       LEP     
Sbjct: 66  VHRRHAYEVNTGSLITPKILTELLSQMLYEHRFAPFYV---EPIIAGMDPYTLEPYVSSM 122

Query: 132 ---------NGVMAIGSGGSYALSAARALMSTQNSA----EEIARKAMSIAADICVYTNH 178
                       + +G+     L    +L      +    E I+R +++      + + +
Sbjct: 123 DLLGCTIDSPDFVVVGTCTDQMLGTCESLWHPNLDSDGLFEAISRASVAS-GGRDIISGY 181

Query: 179 NIVLETLKVG 188
              +  ++  
Sbjct: 182 GARVYLIEHD 191


>gi|2511584|emb|CAA73624.1| multicatalytic endopeptidase [Arabidopsis thaliana]
          Length = 250

 Score = 58.1 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        +A K+ ++        AG    +      
Sbjct: 30  NAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         A+G+    A S  +       + EE    A+ +
Sbjct: 149 MSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKV 195


>gi|242808715|ref|XP_002485222.1| proteasome component Pre1, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218715847|gb|EED15269.1| proteasome component Pre1, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 203

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 44/153 (28%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V+IA       G TV+KA   K R L +   +  F+G   D     E ++  
Sbjct: 5   LGITGKDFVIIAASKAAMRGPTVLKATDDKTRNLSQHT-LMAFSGEPGDGVQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELA-----------KDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           ++ Y  +        A                + Y  NL    + A      +       
Sbjct: 64  VQLYSMRNDSELSPAAVGNFVRGELARALRSRNPYTVNLLLGGVDAITNTPSLYWVDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +    A G    Y LS            E+
Sbjct: 124 SLAQVPYAAHGYAQYYCLSILDKHHHPDIELEQ 156


>gi|15233268|ref|NP_188850.1| PAC1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|12643237|sp|O81148|PSA4_ARATH RecName: Full=Proteasome subunit alpha type-4; AltName: Full=20S
           proteasome alpha subunit C-1; AltName: Full=Proteasome
           27 kDa subunit; AltName: Full=Proteasome component 9;
           AltName: Full=Proteasome subunit alpha type-3
 gi|14423432|gb|AAK62398.1|AF386953_1 20S proteasome subunit PAC1 [Arabidopsis thaliana]
 gi|3421077|gb|AAC32057.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
 gi|11994731|dbj|BAB03060.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
 gi|21554045|gb|AAM63126.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
 gi|23197586|gb|AAN15320.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
 gi|332643070|gb|AEE76591.1| proteasome subunit alpha type-4 [Arabidopsis thaliana]
          Length = 250

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        +A K+ ++        AG    +      
Sbjct: 30  NAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         A+G+    A S  +       + EE    A+ +
Sbjct: 149 MSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKV 195


>gi|226481411|emb|CAX73603.1| 20S proteasome subunit alpha 8 [Schistosoma japonicum]
          Length = 264

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + +          RK+  L     +A FAG +ADA  L+ 
Sbjct: 30  KGSTAIGVRGKDCVVLCVEKKATTKLQ-NDRTVRKIALLDDHVAVA-FAGLTADARILIS 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------------MILIADKTITLVI 121
           R+  + + Y   +            M +  +                +          + 
Sbjct: 88  RIRVECKSYKLTVEDPVSLEYIARYMAQLKQKYTQSNGRRPFGVSTLICGFNQDGTPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                    E    AIG     A             ST+    ++A K++
Sbjct: 148 QTDPSGTHFEWLANAIGKNAKVAREFLEKNYTEDAVSTEYGTVKLAVKSL 197


>gi|224082072|ref|XP_002198635.1| PREDICTED: proteasome (prosome, macropain) subunit, beta type, 2
           [Taeniopygia guttata]
          Length = 201

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 46/154 (29%), Gaps = 11/154 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ ++ +  ++    G   D     E ++K 
Sbjct: 5   IGIQGPDYVLVAADTVAATSIIQMKHDHDKMFKMSEKILLLC-VGEPGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAM------ILIADKTITLVITGMGDVL 128
           ++ Y  +        A      +    YLR+              D     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDDHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G    LS          + EE  
Sbjct: 124 LAKTPFAAHGYGAFLTLSILDRYYKPGITREEAV 157


>gi|15228805|ref|NP_188902.1| PBD1 (20S PROTEASOME BETA SUBUNIT D1); peptidase/ threonine-type
           endopeptidase [Arabidopsis thaliana]
 gi|17380179|sp|O23714|PSB2A_ARATH RecName: Full=Proteasome subunit beta type-2-A; AltName: Full=20S
           proteasome beta subunit D-1; AltName: Full=Proteasome
           component GB; AltName: Full=Proteasome subunit beta
           type-4
 gi|2511590|emb|CAA74026.1| multicatalytic endopeptidase complex, proteasome component, beta
           subunit [Arabidopsis thaliana]
 gi|3421111|gb|AAC32070.1| 20S proteasome beta subunit PBD1 [Arabidopsis thaliana]
 gi|11994294|dbj|BAB01477.1| multicatalytic endopeptidase complex, proteasome component, beta
           subunit [Arabidopsis thaliana]
 gi|15529250|gb|AAK97719.1| AT3g22630/F16J14_20 [Arabidopsis thaliana]
 gi|23505793|gb|AAN28756.1| At3g22630/F16J14_20 [Arabidopsis thaliana]
 gi|332643138|gb|AEE76659.1| proteasome subunit beta type-2-A [Arabidopsis thaliana]
          Length = 204

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 13/161 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  +G  ++A D        + K N  K+  L    ++A  +G   D     E ++K
Sbjct: 4   VFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAA-SGEPGDRVQFTEYVQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            +  Y  +        A            + K   ++  ++   D      +        
Sbjct: 63  NVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
             +    A G G  ++LS       +  S   A E+  K +
Sbjct: 123 LHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCI 163


>gi|170592761|ref|XP_001901133.1| Proteasome A-type and B-type family protein [Brugia malayi]
 gi|158591200|gb|EDP29813.1| Proteasome A-type and B-type family protein [Brugia malayi]
          Length = 238

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 54/181 (29%), Gaps = 25/181 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++  +  D  V +  D  VS G+T    +  +  R+    +I  F G  AD   L   
Sbjct: 22  GTSVCALAYDDGVAVMTDRLVSYGKTAQYRHITRQYRV-NNRVIIAFGGDHADFQWLQNV 80

Query: 75  LE---KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI-----------ADKTITLV 120
           +E    +L+ +      S   L        Y R      L             D+    +
Sbjct: 81  IERQTYELKSHDPNADLSPKMLHGFLTSLLYYRRTRMNPLWNTLVVAGLQTQNDQLEPFI 140

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN------SAEEIARKAMSIAADICV 174
                  +       A G G               +       A +I RK++    ++ +
Sbjct: 141 GVITSRGVAYRTKSXATGMGAMLLNQVIETEQRKNDGKLSKEQAIDILRKSL----ELSI 196

Query: 175 Y 175
           Y
Sbjct: 197 Y 197


>gi|219114683|ref|XP_002176500.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402501|gb|EEC42514.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 130

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 14/116 (12%)

Query: 87  LRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGDVLEPENGVMAIGSGGSY 143
             S  ++  +    K      A  ++          V +         +   A GSG +Y
Sbjct: 3   TPSIAQMLSNTLYYKRFFPYYAFNVMGGVDAQGKGAVYSYDAIGSFERSTYSANGSGQAY 62

Query: 144 ALSAARALMS--------TQNSAEEIA---RKAMSIAADICVYTNHNIVLETLKVG 188
            +     ++            +AEE+    + A   A +  +YT   + +  ++  
Sbjct: 63  IIPLLDNVIGNRNRLDEPPNLTAEEVVEILKDAFLSAGERDIYTGDQVEICVVRAD 118


>gi|31211921|ref|XP_314945.1| AGAP008816-PA [Anopheles gambiae str. PEST]
 gi|30176407|gb|EAA10150.2| AGAP008816-PA [Anopheles gambiae str. PEST]
          Length = 242

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 22/171 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    +  +   K+  + +    A  +G  AD+ TLL+R
Sbjct: 34  GSTAIGISTPDGVVMAVEKRITS-SLIEPSKMEKIVEVDRHIGCAT-SGLMADSRTLLDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIADKTI--T 118
              + + +           +    +                  R     IL A       
Sbjct: 92  ARIECQNHWFVYNERMSVESCAQAVSNVAIQFGDGDDTDSAMSRPFGVAILFAGIENGEP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
            +               AIGSG   A    +       +     ++A+++A
Sbjct: 152 QLWHMDPSGTYIRFDAKAIGSGSEGAQQNLQEYYLPTMT----IKEAINLA 198


>gi|312385966|gb|EFR30350.1| hypothetical protein AND_00124 [Anopheles darlingi]
          Length = 246

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 11/145 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ +     VVIA D  +S G      +  +V R+    I+ G  G  AD   +   
Sbjct: 33  GSSVVGLMFQDGVVIAADKLISYGSLARFHDVDRVYRVNDKTIL-GIGGDFADFQYIKRH 91

Query: 75  LEKK------LEQYPNQLLRS----SVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +++K      L+       RS       +  + R D     L+ +I         +    
Sbjct: 92  IDQKVIDDQCLDDKNQLKPRSFYNWLTRVMYNRRSDFNPLYLDLVIGGMQDGEPFLGHVN 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAAR 149
                  + V+A G G   AL   R
Sbjct: 152 LRGRSYTSNVVATGYGTHLALPLLR 176


>gi|57231694|gb|AAW47560.1| proteasome 28kD subunit 1 [Drosophila ezoana]
 gi|156536449|gb|ABU80379.1| proteasome 28kD subunit 1 [Drosophila montana]
          Length = 224

 Score = 58.1 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 17  KGSTAVGVRGGNCVVLGVEKK-SVAKLQEDRTVRKICVLDHH-VVMAFAGLTADARILIN 74

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +              +L + +      R      LI          + 
Sbjct: 75  RAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPHLF 134

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T+  A ++A +A+
Sbjct: 135 QTEPSGIFYEYKANATGRSAKTVREFFEKQYREEEVSTERGAVKLAIRAL 184


>gi|255627727|gb|ACU14208.1| unknown [Glycine max]
          Length = 204

 Score = 58.1 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  +G  ++  D        V K+N  K+  L    +IA  +G   D     E ++K
Sbjct: 4   VFGLVGNGFAIVVADSSAVHSILVHKSNEDKIMLLDSHKLIAA-SGEPGDRVQFTEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K   ++  ++   DK     +        
Sbjct: 63  NVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPELYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  ++LS       +  S EE  
Sbjct: 123 LHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAV 156


>gi|288917395|ref|ZP_06411762.1| conserved hypothetical protein [Frankia sp. EUN1f]
 gi|288351260|gb|EFC85470.1| conserved hypothetical protein [Frankia sp. EUN1f]
          Length = 192

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 51/165 (30%), Gaps = 13/165 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T I+ V  DG VVI GD     G ++      KV R   G  I GF  S      L   L
Sbjct: 2   TCIVGVEHDGRVVIGGDSAGVAGWSITVRADTKVFR--NGEFIMGFTDSFRMGQLLRYSL 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNL---------EAMILIADKTITLVITGMGD 126
              +    +     + E     R                     L+  +     I     
Sbjct: 60  VPPVPHTWDLDRFMATEFVSVVRDCLREGGFARNEAGNESGGQFLVGIRGQLYRIDSDYQ 119

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
           +    +   A G G  YA  +  + +      EE  RKA+  AA 
Sbjct: 120 IGRTVDNYDAAGCGEEYARGSLHSTI--GEEPEERVRKALEAAAH 162


>gi|57231588|gb|AAW47507.1| proteasome 28kD subunit 1 [Drosophila virilis]
 gi|57231590|gb|AAW47508.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231592|gb|AAW47509.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231594|gb|AAW47510.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231596|gb|AAW47511.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231598|gb|AAW47512.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231600|gb|AAW47513.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231602|gb|AAW47514.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231604|gb|AAW47515.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231606|gb|AAW47516.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231608|gb|AAW47517.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231610|gb|AAW47518.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231612|gb|AAW47519.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231614|gb|AAW47520.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231616|gb|AAW47521.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231618|gb|AAW47522.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231620|gb|AAW47523.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231622|gb|AAW47524.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231624|gb|AAW47525.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231626|gb|AAW47526.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231628|gb|AAW47527.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231630|gb|AAW47528.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231632|gb|AAW47529.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231634|gb|AAW47530.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231636|gb|AAW47531.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231638|gb|AAW47532.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231640|gb|AAW47533.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231642|gb|AAW47534.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231644|gb|AAW47535.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231646|gb|AAW47536.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231648|gb|AAW47537.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231650|gb|AAW47538.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231652|gb|AAW47539.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231654|gb|AAW47540.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231656|gb|AAW47541.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231658|gb|AAW47542.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231660|gb|AAW47543.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231662|gb|AAW47544.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231664|gb|AAW47545.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231666|gb|AAW47546.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231668|gb|AAW47547.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231670|gb|AAW47548.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231672|gb|AAW47549.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231674|gb|AAW47550.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231676|gb|AAW47551.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231678|gb|AAW47552.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231680|gb|AAW47553.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231682|gb|AAW47554.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231684|gb|AAW47555.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231686|gb|AAW47556.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231688|gb|AAW47557.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231690|gb|AAW47558.1| proteasome 28kD subunit 1 [Drosophila americana]
 gi|57231692|gb|AAW47559.1| proteasome 28kD subunit 1 [Drosophila americana]
          Length = 224

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 17  KGSTAVGVRGGNCVVLGVEKK-SVAKLQEDRTVRKICVLDHH-VVMAFAGLTADARILIN 74

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 75  RAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPHLF 134

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T+  A ++A +A+
Sbjct: 135 QTEPSGIFYEYKANATGRSAKTVREFFEKQYREEEVSTERGAVKLAIRAL 184


>gi|326519578|dbj|BAK00162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 249

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 60/164 (36%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ TI+ ++    +V+  +  ++  + ++  + R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTIVGIKCKDGIVLGVEKLITS-KMILAGSNRRLHSVHRNSGLA-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEAANYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                L  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGLSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|262368047|pdb|3JRM|A Chain A, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368048|pdb|3JRM|B Chain B, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368049|pdb|3JRM|C Chain C, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368050|pdb|3JRM|D Chain D, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368051|pdb|3JRM|E Chain E, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368052|pdb|3JRM|F Chain F, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368053|pdb|3JRM|G Chain G, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368073|pdb|3JSE|A Chain A, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368074|pdb|3JSE|B Chain B, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368075|pdb|3JSE|C Chain C, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368076|pdb|3JSE|D Chain D, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368077|pdb|3JSE|E Chain E, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368078|pdb|3JSE|F Chain F, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368079|pdb|3JSE|G Chain G, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368094|pdb|3JTL|A Chain A, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368095|pdb|3JTL|B Chain B, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368096|pdb|3JTL|C Chain C, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368097|pdb|3JTL|D Chain D, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368098|pdb|3JTL|E Chain E, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368099|pdb|3JTL|F Chain F, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
 gi|262368100|pdb|3JTL|G Chain G, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With Mutated P26 Activator
          Length = 227

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L ++    V++  D +V   + + + +  K++ +            +     +  
Sbjct: 27  KGSTALGMKFANGVLLISDKKV-RSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDF 85

Query: 74  -RLEKKLEQ-------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+  + E+           L++   +  + +     +R     ++ A  D+    +   
Sbjct: 86  ARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDC 145

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSI 168
                  E    AIGSG    +S            +E      KA+  
Sbjct: 146 DPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKS 193


>gi|237835989|ref|XP_002367292.1| proteasome subunit alpha type 5, putative [Toxoplasma gondii ME49]
 gi|211964956|gb|EEB00152.1| proteasome subunit alpha type 5, putative [Toxoplasma gondii ME49]
 gi|221484916|gb|EEE23206.1| proteasome subunit alpha type, putative [Toxoplasma gondii GT1]
 gi|221506028|gb|EEE31663.1| proteasome subunit alpha type, putative [Toxoplasma gondii VEG]
          Length = 258

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 55/174 (31%), Gaps = 23/174 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V++A + +++    +   + +K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAVGIQTKDGVILASERRITS-CLLDHRSIQKIVEIDDHIACA-MSGLIADARTLIDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKD----------------WRMDKYLRNLEAMILIA--DKT 116
              +   +           +                   R     R     +L+A  D  
Sbjct: 92  ARVECANHFFTYNEKMSIHSCIDSVADLALDFSDVSDGRRKKMMSRPFGVALLVAGVDDQ 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
              +          +   +AIGS    A +  +   S   S   AE +    + 
Sbjct: 152 GPSLWCADPSGTVTKYQAVAIGSAQEGAETMLQEQYSQSMSFEDAEALVLVVLR 205


>gi|167395003|ref|XP_001733546.1| proteasome subunit beta type 7,10 [Entamoeba dispar SAW760]
 gi|165894307|gb|EDR22340.1| proteasome subunit beta type 7,10, putative [Entamoeba dispar
           SAW760]
          Length = 216

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 3/95 (3%)

Query: 15  ATTILTVRKDGV--VVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            TTI  +  +    VV+A D + ++G  V      K+ +L       G AG++AD     
Sbjct: 25  GTTICGLVCEQGQTVVLACDSRATVGPIVADKACMKLHKLAPNIYCGG-AGTAADLTHAT 83

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE 107
             +  KL  +   + +          + ++L    
Sbjct: 84  NFIATKLGVHRFTIGQMPRVDTAVTMLKRHLFPYG 118


>gi|195447436|ref|XP_002071213.1| GK25669 [Drosophila willistoni]
 gi|194167298|gb|EDW82199.1| GK25669 [Drosophila willistoni]
          Length = 249

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGGNCVVLGVEKK-SMVKLQEDRTVRKICMLDSH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDTDGSPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T++ A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKVVREFFEKTYREEDVATEHGAVKLAIRAL 197


>gi|300706947|ref|XP_002995703.1| hypothetical protein NCER_101331 [Nosema ceranae BRL01]
 gi|239604901|gb|EEQ82032.1| hypothetical protein NCER_101331 [Nosema ceranae BRL01]
          Length = 193

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 12/181 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V+I  D  +     V+K +           +I  + G   DAF     +++K
Sbjct: 5   IALKGKDFVIIGTDASIKNSYLVLKRD-ENKFINVNDRVIFTYLGDQGDAFRTASFVKEK 63

Query: 79  L--EQYPNQLLRSSVELA----KDWRMDKYLRNLEAMILIAD--KTITLVITGMGDVLEP 130
           L  E+  N +  +    A    K        R +E   LI         + +        
Sbjct: 64  LIYEEIQNNVEITPKVTANIIQKSIYRSLRSRPIENYFLIGGLTDNGPELYSVDVYGSMY 123

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETLKV 187
           EN  MA+G    +         +   +   A E+  K   +  + C     NI +  +  
Sbjct: 124 ENNFMAVGIATYFCYGVLDKEYTEDINKDKAIEVLYKCFDVLKERCSVDISNIDIRIISK 183

Query: 188 G 188
            
Sbjct: 184 E 184


>gi|73535638|pdb|1YAR|A Chain A, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535639|pdb|1YAR|B Chain B, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535640|pdb|1YAR|C Chain C, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535641|pdb|1YAR|D Chain D, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535642|pdb|1YAR|E Chain E, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535643|pdb|1YAR|F Chain F, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
 gi|73535644|pdb|1YAR|G Chain G, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
           Pa26 Complex
          Length = 233

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L ++    V++  D +V   + + + +  K++ +            +     +  
Sbjct: 33  KGSTALGMKFANGVLLISDKKV-RSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDF 91

Query: 74  -RLEKKLEQ-------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+  + E+           L++   +  + +     +R     ++ A  D+    +   
Sbjct: 92  ARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDC 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSI 168
                  E    AIGSG    +S            +E      KA+  
Sbjct: 152 DPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKS 199


>gi|332017285|gb|EGI58053.1| Proteasome subunit beta type-7 [Acromyrmex echinatior]
          Length = 111

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 6/107 (5%)

Query: 57  IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--- 113
           +    AG++AD     E +  +LE +     R       +  + + L   +  I  A   
Sbjct: 1   MYCCGAGTAADTEMTTEMIASQLELHRLNTGRVVPVCTANTLIKQMLFRYQGHIGAALIL 60

Query: 114 ---DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
              D     +          +     +GSG   A+S   +   +  S
Sbjct: 61  GGFDLDGPQLYCIYPHGSTEKLKYTTMGSGSLAAMSVLESTWKSDMS 107


>gi|262401103|gb|ACY66454.1| proteasome beta 7 subunit [Scylla paramamosain]
          Length = 79

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
           TTI  +     VV+  D + + G  V   N  K+  L     
Sbjct: 37 GTTIAGIVFKDGVVLGADTRATEGDIVADKNCCKIHYLQPNMY 79


>gi|291001023|ref|XP_002683078.1| proteasome subunit alpha type 5 [Naegleria gruberi]
 gi|284096707|gb|EFC50334.1| proteasome subunit alpha type 5 [Naegleria gruberi]
          Length = 251

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 28/198 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  +      A  +G +ADA TL+E 
Sbjct: 34  GSTAVGIQTPDGVVLAVEKRLTS-SLLEPSSVEKIMEIDSHIGCA-MSGLTADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSS--------------------VELAKDWRMDKYLRNLEAMILIA- 113
              + +Q+                             +   +       R     +LIA 
Sbjct: 92  ARVETQQHRFTYNEPMGVESCTQAVCDLALRFGENGDDSDDEDSGAGMSRPFGVALLIAG 151

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIA 169
            D+    +               AIG+G   A +  +   +       AE +A   +  A
Sbjct: 152 IDENGPSLYHTDPSGTFTRYEAKAIGAGSEGAQTTLQEEYNKSMFLEQAENLAISILKQA 211

Query: 170 ADICVYTNHNIVLETLKV 187
            +  V +  N+ + ++ V
Sbjct: 212 MEEKVNS-SNVEIASITV 228


>gi|126138826|ref|XP_001385936.1| hypothetical protein PICST_61383 [Scheffersomyces stipitis CBS
           6054]
 gi|126093214|gb|ABN67907.1| proteasome component YC1 [Scheffersomyces stipitis CBS 6054]
          Length = 250

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 56/166 (33%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    +V+A +  ++    V   N ++++ + +   +  ++G   D    + 
Sbjct: 29  NGGTSIGIKCKDGIVLAVEKIINSKLLVPGKN-KRIQTIDRHIGVV-YSGLLPDGRHFVN 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-----------AMILIADKTITLVIT 122
           R   + + + +             R+  Y++N             +++   D+    +  
Sbjct: 87  RGRDEAQSFKSIYKTPVSVPHLMDRLGIYVQNYTCYNSVRPFGVVSIVGGVDENGPHLYM 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A G G   A S    L   + +A E  + A  I
Sbjct: 147 IEPSGSCWGYSGAATGKGRQTAKSELEKLNYDELTAREAVKSAAKI 192


>gi|73535659|pdb|1YAU|A Chain A, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535660|pdb|1YAU|B Chain B, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535661|pdb|1YAU|C Chain C, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535662|pdb|1YAU|D Chain D, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535663|pdb|1YAU|E Chain E, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535664|pdb|1YAU|F Chain F, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
 gi|73535665|pdb|1YAU|G Chain G, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
          Length = 233

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L ++    V++  D +V   + + + +  K++ +            +     +  
Sbjct: 33  KGSTALGMKFANGVLLISDKKV-RSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDF 91

Query: 74  -RLEKKLEQ-------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+  + E+           L++   +  + +     +R     ++ A  D+    +   
Sbjct: 92  ARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDC 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSI 168
                  E    AIGSG    +S            +E      KA+  
Sbjct: 152 DPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKS 199


>gi|156536447|gb|ABU80378.1| proteasome 28kD subunit 1 [Drosophila littoralis]
          Length = 224

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 17  KGSTAVGVRGGNCVVLGVEKK-SVAKLQEDRTVRKICVLDHH-VVMAFAGLTADARILIN 74

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +  S           +L + +      R      LI          + 
Sbjct: 75  RAQVECQSHRLNVEDSVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPHLF 134

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T+  A ++A +A+
Sbjct: 135 QTEPSGIFYEYKANATGRSAKTVREFFEKQYREEEVSTERGAVKLAIRAL 184


>gi|126310923|ref|XP_001372468.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 241

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKAMTLKEAIKSSLII 201


>gi|321457997|gb|EFX69073.1| hypothetical protein DAPPUDRAFT_231717 [Daphnia pulex]
          Length = 242

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +      K+  + K    A  +G  AD+ T+++R
Sbjct: 34  GSTAIGIQTSEGVVLAVEKRITS-PLMEPTTIEKIVEIDKHIGCA-VSGLMADSRTMVDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     IL A  D+   
Sbjct: 92  ARVEAQNHWFTYDEKMSVESVAQAVSNLAIQFGDSDDDGNAMSRPFGVAILFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A  + +   +   + +   + A++I
Sbjct: 152 QLFHMDPSGTYVQYDAKAIGSGSEGAQQSLQEAYNKSMTLKSAMKAALTI 201


>gi|117670154|gb|ABK56721.1| unknown [Hordeum vulgare]
          Length = 249

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 60/164 (36%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ TI+ ++    +V+  +  ++  + ++  + R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTIVGIKCKDGIVLGVEKLITS-KMILAGSNRRLHSVHRNSGLA-VAGLAADGRQVVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEAANYEKVYGEPMPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                L  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGLSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|7527361|dbj|BAA94272.1| proteasome subunit LMP7A [Xenopus vestitus]
          Length = 87

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 1/88 (1%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++A D + S G  +      KV  +    ++   +GS+AD       L K+   Y  +  
Sbjct: 1   IVAVDSRASSGSYISNVKFNKVIEINPY-LLGTMSGSAADCQYWERLLAKECRLYQLRNN 59

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADK 115
                 A    M   +       L    
Sbjct: 60  SRISVSAASKLMCNMMLQYRGTGLSVGS 87


>gi|3914421|sp|Q29384|PSB4_PIG RecName: Full=Proteasome subunit beta type-4; Short=Proteasome beta
           chain; AltName: Full=Macropain beta chain; AltName:
           Full=Multicatalytic endopeptidase complex beta chain;
           AltName: Full=Proteasome chain 3; Flags: Precursor
          Length = 154

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 5/108 (4%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G VVIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI 112
              L + L + +   E   +    S   +        Y R  +   L 
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYNRRFKMNPLW 152


>gi|16082284|ref|NP_394744.1| proteasome subunit alpha [Thermoplasma acidophilum DSM 1728]
 gi|585729|sp|P25156|PSA_THEAC RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|1633359|pdb|1PMA|A Chain A, Proteasome From Thermoplasma Acidophilum
 gi|1633361|pdb|1PMA|C Chain C, Proteasome From Thermoplasma Acidophilum
 gi|1633362|pdb|1PMA|D Chain D, Proteasome From Thermoplasma Acidophilum
 gi|1633363|pdb|1PMA|E Chain E, Proteasome From Thermoplasma Acidophilum
 gi|1633364|pdb|1PMA|F Chain F, Proteasome From Thermoplasma Acidophilum
 gi|1633365|pdb|1PMA|G Chain G, Proteasome From Thermoplasma Acidophilum
 gi|1633366|pdb|1PMA|H Chain H, Proteasome From Thermoplasma Acidophilum
 gi|1633367|pdb|1PMA|I Chain I, Proteasome From Thermoplasma Acidophilum
 gi|1633368|pdb|1PMA|J Chain J, Proteasome From Thermoplasma Acidophilum
 gi|1633369|pdb|1PMA|K Chain K, Proteasome From Thermoplasma Acidophilum
 gi|1633370|pdb|1PMA|L Chain L, Proteasome From Thermoplasma Acidophilum
 gi|1633371|pdb|1PMA|M Chain M, Proteasome From Thermoplasma Acidophilum
 gi|1633372|pdb|1PMA|N Chain N, Proteasome From Thermoplasma Acidophilum
 gi|1633373|pdb|1PMA|O Chain O, Proteasome From Thermoplasma Acidophilum
 gi|73535599|pdb|1YA7|A Chain A, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535600|pdb|1YA7|B Chain B, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535601|pdb|1YA7|C Chain C, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535602|pdb|1YA7|D Chain D, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535603|pdb|1YA7|E Chain E, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535604|pdb|1YA7|F Chain F, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|73535605|pdb|1YA7|G Chain G, Implications For Interactions Of Proteasome With Pan And
           Pa700 From The 1.9 A Structure Of A Proteasome-11s
           Activator Complex
 gi|195927401|pdb|3C91|A Chain A, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927402|pdb|3C91|B Chain B, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927403|pdb|3C91|C Chain C, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927404|pdb|3C91|D Chain D, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927405|pdb|3C91|E Chain E, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927406|pdb|3C91|F Chain F, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927407|pdb|3C91|G Chain G, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927415|pdb|3C91|O Chain O, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927416|pdb|3C91|P Chain P, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927417|pdb|3C91|Q Chain Q, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927418|pdb|3C91|R Chain R, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927419|pdb|3C91|S Chain S, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927420|pdb|3C91|T Chain T, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927421|pdb|3C91|U Chain U, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
 gi|195927429|pdb|3C92|A Chain A, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927430|pdb|3C92|B Chain B, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927431|pdb|3C92|C Chain C, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927432|pdb|3C92|D Chain D, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927433|pdb|3C92|E Chain E, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927434|pdb|3C92|F Chain F, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927435|pdb|3C92|G Chain G, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927443|pdb|3C92|O Chain O, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927444|pdb|3C92|P Chain P, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927445|pdb|3C92|Q Chain Q, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927446|pdb|3C92|R Chain R, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927447|pdb|3C92|S Chain S, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927448|pdb|3C92|T Chain T, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|195927449|pdb|3C92|U Chain U, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
 gi|282403709|pdb|3IPM|A Chain A, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403710|pdb|3IPM|B Chain B, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403711|pdb|3IPM|C Chain C, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403712|pdb|3IPM|D Chain D, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403713|pdb|3IPM|E Chain E, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403714|pdb|3IPM|F Chain F, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|282403715|pdb|3IPM|G Chain G, Crystal Structure Of Archaeal 20s Proteasome In Complex
           With The C- Terminus Of Pan
 gi|395159|emb|CAA42094.1| alpha-subunit of the proteasome [Thermoplasma acidophilum]
 gi|10640633|emb|CAC12411.1| proteasome alpha subunit [Thermoplasma acidophilum]
          Length = 233

 Score = 57.7 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L ++    V++  D +V   + + + +  K++ +            +     +  
Sbjct: 33  KGSTALGMKFANGVLLISDKKV-RSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDF 91

Query: 74  -RLEKKLEQ-------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+  + E+           L++   +  + +     +R     ++ A  D+    +   
Sbjct: 92  ARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDC 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSI 168
                  E    AIGSG    +S            +E      KA+  
Sbjct: 152 DPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKS 199


>gi|221112997|ref|XP_002166116.1| PREDICTED: similar to predicted protein isoform 1 [Hydra
           magnipapillata]
          Length = 255

 Score = 57.7 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +V +  + + S+ +       RK+  L     +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGTNIVALGVE-RKSVAKLQEARTVRKICPLDDHVFLA-FAGLTADARILVN 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
               + + +   +               L + +     +R     +LI    D     + 
Sbjct: 88  AARVECQSHKLNVEDPVSLEYITRYIASLKQKYTQSNGMRPFGISMLIVGFDDDGSAHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                    E    AIG                      +S  ++A KA+
Sbjct: 148 QTDPSGTYHEWKANAIGRSSKTVQEYLEKNYSDEEADNDDSIVKLALKAL 197


>gi|147919678|ref|YP_686578.1| proteasome subunit alpha [uncultured methanogenic archaeon RC-I]
 gi|110621974|emb|CAJ37252.1| 20S proteasome, alpha subunit [uncultured methanogenic archaeon
           RC-I]
          Length = 254

 Score = 57.3 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 57/167 (34%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T++ ++    + +  D ++S  + +   +  K+ ++            +     +  
Sbjct: 33  RGATVMGLKSKDGIALLVDKRIST-KLLEAESIEKIFKIDDHIGAVASGLVADGRALVDR 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAK-------DWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+E ++         S   LAK              +R   + +LIA  D+T   +   
Sbjct: 92  ARVEAQINHITYDEPISIGILAKKISDHIQQLTQYGGMRPYGSALLIAGVDETGQRLFET 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                  E   ++IG+  +  +    +   T  S EE   +  KA+ 
Sbjct: 152 DPSGALYEYKAVSIGANRNTVMEMLESQYRTDMSLEEAIVLGIKALY 198


>gi|332373238|gb|AEE61760.1| unknown [Dendroctonus ponderosae]
          Length = 200

 Score = 57.3 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 11/152 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L V+ +  V+IA D   +    VMK++  K+ +L    ++A  +G S D     E + K 
Sbjct: 5   LGVKFNDFVIIAADRTAANSIMVMKSDENKIYKLSNQLVMA-VSGESGDTTQFAEYIAKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIAD---KTITLVITGMGDVL 128
           ++ Y  +               + L             +L+A    K    +        
Sbjct: 64  IQLYKMRNTYELSPKEASSFTRRILADTLRTRSPYMVNLLLAGYDEKEGPQLFYMDHLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +    A G GG ++LS          + E+
Sbjct: 124 VAKVDYAAHGYGGFFSLSIMDRNYLKTMTQEQ 155


>gi|91087635|ref|XP_973117.1| PREDICTED: similar to proteasome zeta subunit [Tribolium castaneum]
 gi|270009423|gb|EFA05871.1| hypothetical protein TcasGA2_TC008671 [Tribolium castaneum]
          Length = 242

 Score = 57.3 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 57/170 (33%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    +      K+  + K    A  +G  AD+ T+++R
Sbjct: 34  GSTAIGICTSEGVVLAVEKRITS-PLMEPTTIEKIVEVDKHIGCA-VSGLMADSRTMIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     IL A  D+   
Sbjct: 92  ARVECQNHWFVYNENMSVESCAQAVSNLAIQFGDSDDDGAAMSRPFGVAILFAGIDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A  + + +     +  E    A++I
Sbjct: 152 QLYHMDPSGTFVQFDAKAIGSGSEGAQQSLQEVYHRSMTLSEATTAALTI 201


>gi|330893830|gb|EGH26491.1| ATP-dependent protease subunit HslV [Pseudomonas syringae pv.
          mori str. 301020]
          Length = 54

 Score = 57.3 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/54 (72%), Positives = 46/54 (85%)

Query: 21 VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
          +R+ G VV+AGDGQVSLG TVMK NA+KVRRL  G +IAGFAG++ADAFTL ER
Sbjct: 1  MRRHGKVVMAGDGQVSLGNTVMKGNAKKVRRLYHGEVIAGFAGATADAFTLFER 54


>gi|323308434|gb|EGA61679.1| Pre3p [Saccharomyces cerevisiae FostersO]
          Length = 123

 Score = 57.3 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
          + V     V++  D + + G  +      K+ R+         +GS+AD   + + ++  
Sbjct: 1  MAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC-RSGSAADTQAIADIVQYH 59

Query: 79 LEQYPNQLLRSSVELAKD 96
          LE Y +Q    S E A  
Sbjct: 60 LELYTSQYGTPSTETAAS 77


>gi|157111349|ref|XP_001651498.1| proteasome subunit alpha type [Aedes aegypti]
 gi|108878439|gb|EAT42664.1| proteasome subunit alpha type [Aedes aegypti]
          Length = 249

 Score = 57.3 bits (137), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + S+ +   +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGKDVVVLGVEKK-SVAKLQEERTVRKICLLDHH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R    L + +      R      LI          + 
Sbjct: 88  RAQVECQSHKLNVEDPVTLEYITRFIAGLKQKYTQSNGRRPFGISCLIGGFDYDGQPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                    +++ A ++A KA+
Sbjct: 148 QTEPSGIYYEWKANATGRSAKTVREFLEKYYTPEQVESEDGAIKLAIKAL 197


>gi|226528124|ref|NP_001149468.1| proteasome subunit alpha type 3 [Zea mays]
 gi|194703092|gb|ACF85630.1| unknown [Zea mays]
 gi|195625734|gb|ACG34697.1| proteasome subunit alpha type 3 [Zea mays]
 gi|195627414|gb|ACG35537.1| proteasome subunit alpha type 3 [Zea mays]
          Length = 249

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 59/164 (35%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ TI+ ++    +V+  +  V+    +  +N R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTIVGIKCKDGIVLGVEKLVTSKMMLEGSN-RRIHSVHRHSGLA-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RTKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                +  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|157869192|ref|XP_001683148.1| 20S proteasome subunit alpha 5; proteasome alpha 5 subunit
           [Leishmania major strain Friedlin]
 gi|68224031|emb|CAJ05127.1| putative proteasome alpha 5 subunit [Leishmania major strain
           Friedlin]
          Length = 244

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 62/194 (31%), Gaps = 22/194 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T L +R    VV+A + +V     V+ ++  K+  +    I A  +G  ADA  L+E 
Sbjct: 34  GSTSLGIRTPKGVVLAAEKRVPS-TLVVPSSMSKIMEIDSH-IAAVMSGMVADARILVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDW--------------RMDKYLRNLEAMILIA--DKTIT 118
              + + +           +                 +     R     +LIA  D+   
Sbjct: 92  ARVESQNHRFTYNEPMSVESCTLATCDLSIQFGESGGKRKLMSRPFGVSLLIAGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +               AIG G   A S          + EE   +A   +    +    
Sbjct: 152 QLWQTDPSGTHTRYDAQAIGGGAEAAQSVFTERYHRNMTLEEGETLAVDILKQVME-DQL 210

Query: 176 TNHNIVLETLKVGD 189
           +  NI +  ++  D
Sbjct: 211 SPENIEVAVVRADD 224


>gi|307171285|gb|EFN63210.1| Proteasome subunit alpha type-3 [Camponotus floridanus]
          Length = 254

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 45/164 (27%), Gaps = 9/164 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +  T++ +R    VV A +  V+       AN R        G  ++G    +       
Sbjct: 33  NGGTVIGLRGKDSVVFAVEKIVTSKLYEAGANKRIFNIDQHVGMAVSGIISDARQIAETA 92

Query: 73  ERLEKKLEQYPN--------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
                  +                S    A              ++   +     +    
Sbjct: 93  RSEAASYKAQYGVGIPLKYLNERVSMYMHAYTLYSAVRPYGCSVLLSAYETDGPALYMID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +       A+G     A +    L  ++ S++++ ++A  I
Sbjct: 153 PSGVSYGYYGCAVGKAKQSAKTEIEKLKLSEMSSKDLVKEAARI 196


>gi|322491688|emb|CBZ26961.1| 20S proteasome subunit alpha 5, (putative) [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 244

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 62/194 (31%), Gaps = 22/194 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T L +R    VV+A + +V     V+ ++  K+  +    I A  +G  ADA  L+E 
Sbjct: 34  GSTSLGIRTPEGVVLAAEKRVPS-TLVIPSSMSKIMEVDSH-IAAVMSGMVADARILVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDW--------------RMDKYLRNLEAMILIA--DKTIT 118
              + + +           +                 +     R     +LIA  D+   
Sbjct: 92  ARVESQNHRFTYNEPMSVESCTLATCDLSIRFGESGGKRKLMSRPFGVSLLIAGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +               AIG G   A S          + EE   +A   +    +    
Sbjct: 152 QLWQTDPSGTHTRYDAQAIGGGAEAAQSIFTERYHRNMTLEEGETLAVDILKQVME-DQL 210

Query: 176 TNHNIVLETLKVGD 189
           +  NI +  ++  D
Sbjct: 211 SPENIEVAVVRADD 224


>gi|225717446|gb|ACO14569.1| Proteasome subunit beta type-2 [Caligus clemensi]
          Length = 204

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 47/155 (30%), Gaps = 12/155 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +  +  V+IA D Q      +M  +  +       +++    G S D     E + 
Sbjct: 3   TSIGIAFNDFVMIATD-QTCAQSILMMKDTCEKTYSLSNHLLMSAIGQSGDTTEFAEFMT 61

Query: 77  KKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITL--VITGMG 125
           K ++ Y  +                        +   ++  +I   DK  +   + +   
Sbjct: 62  KNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNPFHVNLLIAGYDKKSSKAELYSMDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                +    + G GG ++            + EE
Sbjct: 122 LAGMVKTEHASHGYGGIFSSGILDRHYRPDMTVEE 156


>gi|240848541|ref|NP_001155462.1| proteasome alpha 4 subunit-like [Acyrthosiphon pisum]
 gi|239788330|dbj|BAH70853.1| ACYPI002153 [Acyrthosiphon pisum]
          Length = 272

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 61/193 (31%), Gaps = 21/193 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L    +   AG    +    + 
Sbjct: 30  HAGTCLGILTNDGVLLAAEKRNVNKLLDETCGSEKIYKLNDDMVCSVAGITADANVLVSE 89

Query: 72  LERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++        +          ++ + +      R     IL           +  
Sbjct: 90  LRSISERYRMQYGDSIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDAHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMS---IAADICVY 175
                         IG+  + A+++ +          + A+++A K +S    A  +   
Sbjct: 150 SDPSGNYCGWKATCIGTNSAAAIASLKTEYKEGQMTLDEAKKLAVKILSKTLDATKL--- 206

Query: 176 TNHNIVLETLKVG 188
           T   + + TLK  
Sbjct: 207 TADKVEMATLKRE 219


>gi|296734|emb|CAA43963.1| macropain subunit delta [Homo sapiens]
          Length = 180

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 46/155 (29%), Gaps = 11/155 (7%)

Query: 41  VMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD 100
           +      K+  +         +GS+AD   + + +  +L  +  +L    +         
Sbjct: 1   IANRVTDKLTPIHDRIFCC-RSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFK 59

Query: 101 KYLRNLEAMILIA-------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS 153
           +        ++          +    V +     +         GSG SY      A   
Sbjct: 60  EMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYR 119

Query: 154 TQNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
              + EE  +    A+++A +    +   I L  +
Sbjct: 120 EGMTKEECLQFTANALALAMERDGSSGGVIRLAAI 154


>gi|58266240|ref|XP_570276.1| hypothetical protein CND01660 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134111192|ref|XP_775738.1| hypothetical protein CNBD4670 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258402|gb|EAL21091.1| hypothetical protein CNBD4670 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226509|gb|AAW42969.1| hypothetical protein CND01660 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 289

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 15/163 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR    VV+  + + +L Q       RKV  L    +   FAG +AD   L++
Sbjct: 30  RGTCAVGVRGKSCVVLGVEKKSTL-QLQDPRTVRKVAMLDDH-VCVAFAGLTADGRILID 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD-------KTITLV 120
           +   + + +   +            +A   +       +    + A         TI  +
Sbjct: 88  KARIECQSHRLTVEDPVSIEYITKHIAGIQQRYTQSGGVRPFGISALIVGFDPHDTIPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
            +     +       +IG                    E+  +
Sbjct: 148 YSTEPSGIYSAWKACSIGRASKTVREFLEKNYVEDLEREQAIK 190


>gi|168024139|ref|XP_001764594.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684172|gb|EDQ70576.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 237

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 16/160 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +   +  K+  + +    A  +G +ADA TL+E 
Sbjct: 34  GSTAVGLKTKEGVVLAVEKRITS-VLLEPTSVEKIMEIDEHIGCA-MSGLTADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D++   +
Sbjct: 92  GRVETQNHRFSYNEPMSVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDESGPCL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                     +    AIGSG   A ++ +   +   + EE
Sbjct: 152 YHTDPSGTFWQCDAKAIGSGSEGADTSLQEHFNKNMTLEE 191


>gi|56567040|gb|AAV98549.1| proteasome subunit beta type 5 [Macaca mulatta]
          Length = 108

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 3/84 (3%)

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---A 158
              ++  MI   DK    +     +         ++GSG  YA        S       A
Sbjct: 3   MGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVGSGSVYAYGVMDRGYSYDLEVEQA 62

Query: 159 EEIARKAMSIAADICVYTNHNIVL 182
            ++AR+A+  A     Y+   + L
Sbjct: 63  YDLARRAIYQATYRDAYSGGAVNL 86


>gi|302696841|ref|XP_003038099.1| hypothetical protein SCHCODRAFT_83883 [Schizophyllum commune H4-8]
 gi|300111796|gb|EFJ03197.1| hypothetical protein SCHCODRAFT_83883 [Schizophyllum commune H4-8]
          Length = 194

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 46/152 (30%), Gaps = 12/152 (7%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +     V++A D   +     MKA+  K++ L    ++  ++G   D     E +E+ +
Sbjct: 6   ALTGKDYVIVAADTTAARSIVKMKADEDKIKTLSPH-LLMAYSGEPGDTVQFAEYVERNI 64

Query: 80  EQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
             Y  +   +    A                  Y  NL        +    +        
Sbjct: 65  RLYQIRHHYALRPSAAASWIRRSLAESLRSRHPYSVNLLVGGFDTAQETAHLYWIDYLGT 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                  A G G  +ALS      +   + EE
Sbjct: 125 STPVPFAAHGYGSYFALSTFDRYHNPDATVEE 156


>gi|320582204|gb|EFW96422.1| proteasome subunit [Pichia angusta DL-1]
          Length = 194

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 11/153 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R    V++A     + G +V+K    K R L + N++A F G S D     + ++ 
Sbjct: 4   ILGIRVKDSVIVATSKAFTRGISVLKDTDDKTRVLNQYNLLA-FTGESGDTTQFADYIQA 62

Query: 78  KLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIA------DKTITLVITGMGDV 127
            ++ +  +        A       ++   +R+     +        + +   +       
Sbjct: 63  NIQLFTMRENTELNSKAIASFVRQQLATSIRSRTPYQVQVLLGGLHNGSEPFLSLIDYLG 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +    A G    Y +S          + +E
Sbjct: 123 TRVDLPYCAHGYAAFYTMSLLDHHYRPDMALDE 155


>gi|308499719|ref|XP_003112045.1| CRE-PAS-4 protein [Caenorhabditis remanei]
 gi|308268526|gb|EFP12479.1| CRE-PAS-4 protein [Caenorhabditis remanei]
          Length = 253

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 19/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    +VI  + + S+         RK+  +    ++A FAG SADA  L++
Sbjct: 29  KGSTAVGVRGKDCIVIGVEKK-SIPALQDDRTIRKIHMIDDHVMLA-FAGLSADARVLVD 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTI---TLVI 121
           R   + + Y   L            +             R     +LI          + 
Sbjct: 87  RARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAMS 167
                    E    + G G            S +N+A+E     +  K+++
Sbjct: 147 KTEPSGAYYEYVANSTGRGEKPVREYLEEHYSEENTADEATTLKLVVKSLA 197


>gi|159125011|gb|EDP50128.1| proteasome component Pre1, putative [Aspergillus fumigatus A1163]
          Length = 212

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V++A       G T++KA   K R+L +   +  F+G + D     E ++  
Sbjct: 14  LGITGKDFVILAASKAAMRGPTILKAEDDKTRQLSQHT-LMAFSGEAGDTVQFAEYIQAN 72

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK--TITLVITGMGDV 127
           +  Y  +        A               +    +  ++   D       +       
Sbjct: 73  VALYTMRNDTELRPNAVANFVRGELARSLRSRNPYTVNLLLGGVDSITQEPHLYWIDYLS 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          S E+
Sbjct: 133 ALARVPYAAHGYAQYYCLSILDKHHHPDISLEQ 165


>gi|302417720|ref|XP_003006691.1| proteasome component PRE6 [Verticillium albo-atrum VaMs.102]
 gi|261354293|gb|EEY16721.1| proteasome component PRE6 [Verticillium albo-atrum VaMs.102]
          Length = 283

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   VVV+  + + S  +           +L   ++   F G +ADA  L++
Sbjct: 45  RGTCAVGVKGQDVVVLGCEKR-SAMKLQDTRITPSKLQLLDTHVCLAFVGLNADARILVD 103

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   +   +        +A   +       +    +            +  +
Sbjct: 104 KARLEAQSHKLTVEDPASIEYMTKYVAGVQQRYTQSGGVRPFGISTLIVGFDNGSKVPRL 163

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  +       AIG                    E   R A+  
Sbjct: 164 YQTEPSGIYSAWKANAIGRSSKTVREFLERNYKDDMDREATIRLAIKS 211


>gi|156847815|ref|XP_001646791.1| hypothetical protein Kpol_1023p108 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117471|gb|EDO18933.1| hypothetical protein Kpol_1023p108 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 254

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 59/194 (30%), Gaps = 19/194 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + ++ +  VV+  + + +L     +    K+ ++    +I  F+G +AD+  L+E
Sbjct: 29  RGTCSVGIKGENCVVLGCERRSTLKLQDTRITPSKISKIDNH-VILSFSGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   L            +A   +       +    +         +     +
Sbjct: 88  KARIEAQSHKLTLEDPISVEYLTRYVAGVQQRYTQSGGVRPFGISTLIAGFDPNDKTPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTN 177
                  +        IG                     + EE  +  +    ++ V T 
Sbjct: 148 YQTEPSGIYSSWTAQTIGRNSKTVREFLENNYDRNEPPKTVEECVKLTVKSLLEV-VQTG 206

Query: 178 H-NIVLETLKVGDE 190
             NI +  +K   E
Sbjct: 207 AKNIEITVVKPDSE 220


>gi|119501034|ref|XP_001267274.1| proteasome component Pre1, putative [Neosartorya fischeri NRRL 181]
 gi|119415439|gb|EAW25377.1| proteasome component Pre1, putative [Neosartorya fischeri NRRL 181]
          Length = 212

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 45/153 (29%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V++A       G T++KA   K R+L +   +  F+G + D     E ++  
Sbjct: 14  LGITGKDFVILAASKAAMRGPTILKAEDDKTRQLSQHT-LMAFSGEAGDTVQFAEYIQAN 72

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK--TITLVITGMGDV 127
           +  Y  +        A               +    +  ++   D       +       
Sbjct: 73  VALYTMRNDTELRPNAVANFVRGELARSLRSRNPYTVNLLLGGVDSITEEPHLYWIDYLS 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS       +  S E+
Sbjct: 133 ALARVPYAAHGYAQYYCLSILDKHHHSDISLEQ 165


>gi|116192001|ref|XP_001221813.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88181631|gb|EAQ89099.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 269

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 46/174 (26%), Gaps = 15/174 (8%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
           ++   +  T  + V+   VVV+  + + S  +            L   ++   FAG +AD
Sbjct: 25  NFPYHI-GTCAVGVKGTDVVVLGCEKR-SAMKLQDTRITPSKIGLLDTHVCLAFAGLNAD 82

Query: 68  AFTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------D 114
           A  L+++   + + +   L            +A   +       +    +          
Sbjct: 83  ARILVDKARLEAQSHRLNLEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLVVGFDKG 142

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       +       AIG                    E   R A   
Sbjct: 143 SEQPRLYQTEPSGIYSAWKANAIGRSSKTVREFLERNYKEDMDREATVRLAFKS 196


>gi|321257298|ref|XP_003193540.1| proteasome subunit alpha type 7 [Cryptococcus gattii WM276]
 gi|317460010|gb|ADV21753.1| Proteasome subunit alpha type 7, putative [Cryptococcus gattii
           WM276]
          Length = 289

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 15/163 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR    VV+  + + +L Q       RKV  L    +   FAG +AD   L++
Sbjct: 30  RGTCAVGVRGKSCVVLGVEKKSTL-QLQDPRTVRKVAMLDDH-VCVAFAGLTADGRILID 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD-------KTITLV 120
           +   + + +   +            +A   +       +    + A         TI  +
Sbjct: 88  KARIECQSHRLTVEDPVSIEYITKHIAGIQQRYTQSGGVRPFGISALIVGFDPHDTIPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
            +     +       +IG                    EE  +
Sbjct: 148 YSTEPSGIYSAWKACSIGRASKTVREFLEKNYVDDLGREEAIK 190


>gi|302696943|ref|XP_003038150.1| hypothetical protein SCHCODRAFT_63608 [Schizophyllum commune H4-8]
 gi|300111847|gb|EFJ03248.1| hypothetical protein SCHCODRAFT_63608 [Schizophyllum commune H4-8]
          Length = 248

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + ++    +V+A +  V     V  AN R+++ + +   +A  AG  AD   L  
Sbjct: 33  NSGTAIGIKCKDGIVLAVEKLVHSKLLVPGAN-RRIQTIDRHVGLAT-AGLLADGRHLAN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   +   Y +             R+  Y+             + +++   DK    +  
Sbjct: 91  RARDETASYRDLYKAPVTMKHLVERLSLYVQAYTLYSSVRPFGISSILGAIDKDGPQLFV 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       A+G G   A +    L   + SA E    A  I
Sbjct: 151 VEPSGVFYGYHGAAVGKGRQLAKTELEKLKLQELSAREAVTDAARI 196


>gi|296088721|emb|CBI38171.3| unnamed protein product [Vitis vinifera]
          Length = 246

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 42/133 (31%), Gaps = 1/133 (0%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  + + +      VI    ++S+G  ++  +  K+ +L    ++A 
Sbjct: 89  MTKQQANWSLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMA- 147

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   L + L  +   Y +Q  +     A    +   L         +   +  +
Sbjct: 148 SSGFQADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGL 207

Query: 121 ITGMGDVLEPENG 133
                  + P   
Sbjct: 208 DNEGKGWVLPRCC 220


>gi|195403133|ref|XP_002060149.1| Pros28.1 [Drosophila virilis]
 gi|194140993|gb|EDW57419.1| Pros28.1 [Drosophila virilis]
          Length = 249

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGGNCVVLGVEKK-SVAKLQEDRTVRKICVLDHH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T+  A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKTVREFFEKQYREEEVSTERGAVKLAIRAL 197


>gi|294979289|pdb|2KU2|A Chain A, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979290|pdb|2KU2|B Chain B, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979291|pdb|2KU2|C Chain C, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979292|pdb|2KU2|D Chain D, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979293|pdb|2KU2|E Chain E, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979294|pdb|2KU2|F Chain F, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979295|pdb|2KU2|G Chain G, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
          Length = 237

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L ++    V++  D +V   + + + +  K++ +            +     +  
Sbjct: 37  KGSTALGMKFANGVLLISDKKV-RSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDF 95

Query: 74  -RLEKKLEQ-------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+  + E+           L++   +  + +     +R     ++ A  D+    +   
Sbjct: 96  ARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDC 155

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSI 168
                  E    AIGSG    +S            +E      KA+  
Sbjct: 156 DPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKS 203


>gi|255540109|ref|XP_002511119.1| proteasome subunit alpha type, putative [Ricinus communis]
 gi|223550234|gb|EEF51721.1| proteasome subunit alpha type, putative [Ricinus communis]
          Length = 250

 Score = 57.3 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 48/167 (28%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A T + +      V+ G+ +V+        +  K+ ++        AG    +      
Sbjct: 30  NAGTAIGILSKDGAVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   Y  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         A+G+    A S  +       + EE  + A+ +
Sbjct: 149 MSDPSGNYGGWKAAAVGANNQAAQSMLKQDYKDDITREEAVQLALKV 195


>gi|221052130|ref|XP_002257641.1| proteasome beta-subunit [Plasmodium knowlesi strain H]
 gi|193807471|emb|CAQ37977.1| proteasome beta-subunit, putative [Plasmodium knowlesi strain H]
          Length = 256

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 43/216 (19%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    ++IA D + S G      N  ++ ++     +  F+G  ADA  L E 
Sbjct: 9   GTSVIALKYKHGILIAADKKASYGSYAKFQNVERIFKI-NNKTVMSFSGELADAQYLHEA 67

Query: 75  L-----------EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------- 113
           L           + K + +  +   S V      R +K       +I+            
Sbjct: 68  LTRVNVNNVMDKKSKYDVHNTKYYHSYVGRLFYNRKNKIDPLFNTIIVAGVNSQDYDDND 127

Query: 114 ------------------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                             +K    +        +     M  G    +AL+  R      
Sbjct: 128 KDVLLYSDKHTTDEYKIINKEDLYIGFVDMHGTQFSADYMTTGYARYFALTLLRDHYKDY 187

Query: 156 NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
            + EE   +  + + +        ++ I +  +   
Sbjct: 188 MTEEEAKTLLNECLRVLYYRDATASNKIQIVKITSK 223


>gi|84997475|ref|XP_953459.1| proteasome subunit [Theileria annulata strain Ankara]
 gi|65304455|emb|CAI76834.1| proteasome subunit, putative [Theileria annulata]
          Length = 236

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
               ++ V+ + VVVIA + + +      + N +K+ +L +   +A FAG +ADA  L  
Sbjct: 28  RGGCVVGVKSNDVVVIAAERKSTTKLQDPRCN-KKILQLDENLALA-FAGLNADARVLAN 85

Query: 74  RLEKKLEQYPNQLLRSSV--ELAK--DWRMDKYLRNLEAMILIAD--------KTITLVI 121
           +   + ++Y   +  ++    +AK       KY       +                 + 
Sbjct: 86  KTRLECQRYKLNMDEAATVGYIAKYIARLQQKYTHKGGVRLFGVSLLVVGFDYNGKPALF 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                 +       +IG    +             S++E   +A KA+
Sbjct: 146 QTEPSGIYSSWKAQSIGKNSKHVQEYLEKNYKEDLSSDEAVMLAVKAL 193


>gi|70994594|ref|XP_752074.1| proteasome component Pre1 [Aspergillus fumigatus Af293]
 gi|66849708|gb|EAL90036.1| proteasome component Pre1, putative [Aspergillus fumigatus Af293]
          Length = 212

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V++A       G T++KA   K R+L +   +  F+G + D     E ++  
Sbjct: 14  LGITGKDFVILAASKAAMRGPTILKAEDDKTRQLSQHT-LMAFSGEAGDTVQFAEYIQAN 72

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK--TITLVITGMGDV 127
           +  Y  +        A               +    +  ++   D       +       
Sbjct: 73  VALYTMRNDTELRPNAVANFVRGELARSLRSRNPYTVNLLLGGVDSITQEPHLYWIDYLS 132

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          S E+
Sbjct: 133 ALARVPYAAHGYAQYYCLSILDKHHHPDISLEQ 165


>gi|242006680|ref|XP_002424175.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
 gi|212507516|gb|EEB11437.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
          Length = 242

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 55/170 (32%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+A + +++    +  +   K+  +      A  +G  AD+  +++R
Sbjct: 34  GSTAIGVCTSEGVVLAVEKRITS-PLMEPSTIEKIVEIDSHIGCA-VSGLMADSRIMIDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     IL A  D+   
Sbjct: 92  ARVEAQNHWFIYNEKMSVESCAQAVSNLAVQFGDSDEEGSAMSRPFGVAILFAGCDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A  + +   +   + +E     ++I
Sbjct: 152 QLYHMDPSGTFMQFDAKAIGSGSEGAQQSLQEAFNKSLTLKEAVTTVLTI 201


>gi|255647791|gb|ACU24356.1| unknown [Glycine max]
          Length = 227

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 16/168 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                     +     IGSG   A S  +   S   + +E    A SI
Sbjct: 152 YYTDPFGTFWQCNGKGIGSGSEGADSFLQEQFSKDLTLQEAGTIAFSI 199


>gi|170063523|ref|XP_001867140.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
 gi|167881114|gb|EDS44497.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
          Length = 222

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 27/69 (39%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H TT L     G V++A D + + GQ +     +K+  + +  +     G++       +
Sbjct: 107 HGTTTLGFLFQGEVILAVDSRATGGQFIGSQTVKKIVEINEYLLGTLADGAADCVVYYYK 166

Query: 74  RLEKKLEQY 82
            +   +   
Sbjct: 167 GMGISMRMM 175


>gi|294979282|pdb|2KU1|A Chain A, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979283|pdb|2KU1|B Chain B, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979284|pdb|2KU1|C Chain C, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979285|pdb|2KU1|D Chain D, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979286|pdb|2KU1|E Chain E, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979287|pdb|2KU1|F Chain F, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
 gi|294979288|pdb|2KU1|G Chain G, Dynamic Regulation Of Archaeal Proteasome Gate Opening As
           Studied By Trosy-Nmr
          Length = 237

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L ++    V++  D +V   + + + +  K++ +            +     +  
Sbjct: 37  KGSTALGMKFANGVLLISDKKV-RSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDF 95

Query: 74  -RLEKKLEQ-------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+  + E+           L++   +  + +     +R     ++ A  D+    +   
Sbjct: 96  ARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDC 155

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSI 168
                  E    AIGSG    +S            +E      KA+  
Sbjct: 156 DPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKS 203


>gi|170593213|ref|XP_001901359.1| Proteasome subunit alpha type 7-1 [Brugia malayi]
 gi|158591426|gb|EDP30039.1| Proteasome subunit alpha type 7-1, putative [Brugia malayi]
          Length = 258

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VVI  + + S+         RK+  + +  ++A FAG SADA  L++
Sbjct: 29  KGSTAVGVRGKNCVVIGVEKK-SIPTLQDDRTIRKIHSIDEHVMLA-FAGLSADARVLVD 86

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + Y   L         +  +A   +            +              + 
Sbjct: 87  RARIECQSYKLTLEDPVTVGYIARFIANTKQRFTQSPGRRPFGISMLIGGFDFDGTPRLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAM 166
                    E    + G G            + + +A+E     +  KA+
Sbjct: 147 KTEPSGAYYEYSANSTGRGEKPVREYLEEHYNDETTADEASVLKLVVKAL 196


>gi|50287193|ref|XP_446026.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525333|emb|CAG58950.1| unnamed protein product [Candida glabrata]
          Length = 254

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 49/173 (28%), Gaps = 21/173 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + ++    VV+  + + +L     +  A KV  +    +++ FAG +AD+  L+ 
Sbjct: 29  RGTCAVGLKGKDCVVLGCERRSTLKLQDTRVIASKVLPIDSHLVLS-FAGLNADSRILVN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE--------------AMILIADKTITL 119
               + + +   L            +    +                 A     D     
Sbjct: 88  MARVEAQSHRLTLEDPVTVEYMARYVAGVQQKYTQSGGVRPFGVSTLIAGFDPRDTENPR 147

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIAR---KAM 166
           +       +       AIG              + +      EE  R   KA+
Sbjct: 148 LYQTEPSGIYSSWCAQAIGRNSKTVREFLEKNYNREEPPSNKEECIRLTVKAL 200


>gi|149591845|ref|XP_001517317.1| PREDICTED: similar to proteasome subunit RC10-II [Ornithorhynchus
           anatinus]
          Length = 181

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 52/180 (28%), Gaps = 36/180 (20%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  +   ++ ++    V IA D +  +   ++  + +K+  +G    I G AG + D 
Sbjct: 26  SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYI-GLAGLATDV 84

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
            T+  R                          +   + E   L  D+  + +        
Sbjct: 85  QTVPPR-------------------------SRCAPSGEGRPLPGDRGCSPLSDADPSRR 119

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                      G     +   +         E   +AM  A D    +   +V+  ++  
Sbjct: 120 ----------GGSQSPHARCESSRREPEHLFETISQAMLNAVDRDAVSGMGVVVHVIEKN 169


>gi|242001472|ref|XP_002435379.1| proteasome alpha subunit, putative [Ixodes scapularis]
 gi|215498709|gb|EEC08203.1| proteasome alpha subunit, putative [Ixodes scapularis]
          Length = 253

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 38/164 (23%), Gaps = 9/164 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + +R    VV A +  V+       AN R        G  +AG    +       
Sbjct: 33  NSGTAVALRGKDGVVFAVEKLVTSKLYEAGANKRIFTVDRHVGVAVAGLLADAKQIVETA 92

Query: 73  ERLEKKLE--------QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
                               +        A              ++   D     +    
Sbjct: 93  RVEASNYRSDYGVPIPLKYLKDRVGLYMHAYTLYSAVRPFGCSVLMGSHDSDGPQLYCID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                      AIG     A +            +++ ++A  I
Sbjct: 153 PSGTSWGYYGCAIGKARQAAKTEMEKQQLRDLCCKDLIKEAAKI 196


>gi|291241738|ref|XP_002740767.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 208

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +    T++L ++ DG V+IA D   S G         ++       I+ G +G  AD 
Sbjct: 41  QPM-TTGTSVLGIKFDGGVMIAADTLGSYGSLARFRQISRIYAANNNTILGG-SGDVADF 98

Query: 69  FTLLERLEKKLEQYPNQLLRSS 90
             L   +E+++      ++ ++
Sbjct: 99  QFLKAVVEQRIFLGYVNMVGTA 120


>gi|170588333|ref|XP_001898928.1| 20S proteasome alpha5 subunit [Brugia malayi]
 gi|158593141|gb|EDP31736.1| 20S proteasome alpha5 subunit, putative [Brugia malayi]
          Length = 248

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +R    V++A + + +    V      K+ ++    +   FAG  AD+ TL+ER
Sbjct: 34  GSTSIGIRTIEGVILAAEKRATSKLMV-NDAIEKISKVDSH-VAVTFAGLIADSRTLVER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK-------------YLRNLEAMILIA--DKTITL 119
            + + + +     R          +                 R     +L A  D+    
Sbjct: 92  AQIEAQNFWFTYNRKIRVEDVTMSVANLALQFGDDDAKASMSRPFGVAMLFAGVDQDGPR 151

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           +          +    +IG+    A    +       S  E  + A+SI
Sbjct: 152 LFHLDPSGTFIDCLAKSIGAASDGAEQTLKEQYHESISLVEAEKIALSI 200


>gi|70941290|ref|XP_740951.1| proteasome precursor [Plasmodium chabaudi chabaudi]
 gi|56519018|emb|CAH76013.1| proteasome precursor, putative [Plasmodium chabaudi chabaudi]
          Length = 268

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 68/222 (30%), Gaps = 62/222 (27%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            TTI+ +  +  V++A D + S G  V    +RK+ R+ +   +   G +  S     ++
Sbjct: 22  GTTIIGIIYEHGVMLACDTRTSSGTFVSNKCSRKINRINENIYVCRSGASAHSQKVIEVI 81

Query: 73  ERLEKKLEQYPNQLLR---------------------------SSVELAKDWRMDKYL-- 103
           +     ++    +  R                           S +   K +  DK++  
Sbjct: 82  KHYCASMKSENRKKGRFHEDEIITDDINDEEIDVNQINNINNNSVIAQNKYYYDDKFMDY 141

Query: 104 -------RNLEAMILIADKT---ITLVITGMG-------------DVLEPENGVMAIGSG 140
                    +   ++ A+       L+  G                 +  ++     GSG
Sbjct: 142 NPLVENVAYITKKLIYANNNFLSCGLIFGGYDKVKKQQLYSVNLNGSIIQKHDYAVSGSG 201

Query: 141 GSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
             Y  S  +       + +E   +    +  A    +Y N N
Sbjct: 202 SIYIQSYLQDKYKQNMTKKECFDLILNCVKYA----IY-NDN 238


>gi|24654389|ref|NP_725669.1| proteasome alpha5 subunit, isoform A [Drosophila melanogaster]
 gi|24654391|ref|NP_477202.2| proteasome alpha5 subunit, isoform B [Drosophila melanogaster]
 gi|12643296|sp|Q95083|PSA5_DROME RecName: Full=Proteasome subunit alpha type-5
 gi|7302800|gb|AAF57875.1| proteasome alpha5 subunit, isoform A [Drosophila melanogaster]
 gi|16769466|gb|AAL28952.1| LD33318p [Drosophila melanogaster]
 gi|21645223|gb|AAM70874.1| proteasome alpha5 subunit, isoform B [Drosophila melanogaster]
 gi|220944274|gb|ACL84680.1| ProsMA5-PA [synthetic construct]
 gi|220954210|gb|ACL89648.1| ProsMA5-PA [synthetic construct]
          Length = 244

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 20/164 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    V      K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTPEGVVLAVEKRITSPLMVPS-TVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKT-- 116
              + + +           +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAG 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +           +G  AIGSG   A    + L     + +E
Sbjct: 152 QPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDE 195


>gi|71020191|ref|XP_760326.1| hypothetical protein UM04179.1 [Ustilago maydis 521]
 gi|46100035|gb|EAK85268.1| hypothetical protein UM04179.1 [Ustilago maydis 521]
          Length = 194

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 49/162 (30%), Gaps = 15/162 (9%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +   G  +IA D   +     MK +  K + L    ++A ++G   D     E +E+  
Sbjct: 6   GITGKGYTIIASDSNAARSIVKMKTDVDKQKVLSDHLVMA-YSGEPGDTLQFSEWIERNS 64

Query: 80  EQYPNQLLRSSVELAKD---------WRMDKYLRNLEAMILIAD--KTITLVITGMGDVL 128
             Y  +        +               +    +  ++   D   +   +        
Sbjct: 65  RLYSIRNHVELRPKSAAAWIRKQLAESLRSRNPYQVNYLLGGFDLPNSEPALYWIDYLGT 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                  A G G  +A+S          S EE   + R+ ++
Sbjct: 125 LATVPFAAHGYGAFFAMSTLDRYHRPDMSLEEGLDLLRRCIN 166


>gi|83314992|ref|XP_730601.1| proteasome subunit beta type 1 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23490372|gb|EAA22166.1| proteasome subunit beta type 1-related [Plasmodium yoelii yoelii]
          Length = 214

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 20/161 (12%)

Query: 45  NARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYP--NQLLRSSVELAKDWRMDKY 102
           N  K+ ++     I G +G  +D  TL   L+KK++ +   +    S   +AK   +  Y
Sbjct: 41  NCPKISKITD-KCIIGSSGMQSDIKTLHSLLQKKIQLFYLEHSHYPSIHVIAKLLCVTLY 99

Query: 103 LRNLEAM-----ILIADKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
            R          +   D+     + +         +     GSG S  L      +  +N
Sbjct: 100 SRRFFPYYTFNILAGIDEDGKGVLYSYDAIGSYYMSTHACTGSGSSLILPILDNRVEQKN 159

Query: 157 -----------SAEEIARKAMSIAADICVYTNHNIVLETLK 186
                            + AM+ A +  +YT     +  + 
Sbjct: 160 QLIKNIDFNLRDDINFVKDAMTSATERDIYTGDQAEIYIID 200


>gi|328354240|emb|CCA40637.1| 20S proteasome subunit alpha 3 [Pichia pastoris CBS 7435]
          Length = 288

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 59/189 (31%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T + V  +  VV+A + +V+       ++A K+  L    I A    ++     +  
Sbjct: 66  HAGTAIGVLANDGVVLAAEKKVTSKLLEQDSSAEKMYILNDNMICAVAGMTADAGILINN 125

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VIT 122
            R+  +              L +     K        LR      + A         + T
Sbjct: 126 VRITAQGYLKTYNENIPCEMLVRHLCDIKQGYTQHGGLRPFGVSFIYAGYDERYGFQLYT 185

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                        ++G+  S A +  +       + EE   +A K +S   D    T+  
Sbjct: 186 SNPSGNYSGWKATSVGANNSSAQTLLKQDYKNDINLEEAKNLALKVLSKTMDSSSLTSEK 245

Query: 180 IVLETLKVG 188
           I   T+   
Sbjct: 246 IEFATITKN 254


>gi|167518918|ref|XP_001743799.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777761|gb|EDQ91377.1| predicted protein [Monosiga brevicollis MX1]
          Length = 256

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 20/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +R    VV+A + + S  +       RK+ +L     +A FAG +ADA  L+ 
Sbjct: 30  KGTTAVGIRGKDCVVLAVERR-SAAKLQDTRTVRKICKLDDHIFMA-FAGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           +   + + Y   +            +A+  +            + A            + 
Sbjct: 88  KTCVECQSYRLTVEDPPTVEYITRFVAQIKQKYTQSNGRRPFGISALIVGFDPDGTPRLF 147

Query: 122 TGMGDVLEPENGVMAIGSG-GSYALSAARALMSTQNSAE-----EIARKAM 166
                         +IG               S +  A+     ++A KA+
Sbjct: 148 QTDPSGTYSAWSANSIGGPRSKTVREYLEKQYSEEAVADVEGCQKLAVKAL 198


>gi|7527369|dbj|BAA94276.1| proteasome subunit LMP7A [Xenopus (Silurana) tropicalis]
          Length = 87

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 1/88 (1%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++A D + S G  +      KV  +    ++   +GS+AD       L K+   Y  +  
Sbjct: 1   IVAVDSRASAGSYISNVKFNKVIEINPY-LLGTMSGSAADCQYWERVLAKECRLYQLRNN 59

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADK 115
                 A    M   +       L    
Sbjct: 60  SRISVSAASKLMCNMMLQYRGTGLSVGS 87


>gi|298508225|pdb|1VSY|D Chain D, Proteasome Activator Complex
 gi|298508239|pdb|1VSY|R Chain R, Proteasome Activator Complex
 gi|298508441|pdb|3L5Q|I Chain I, Proteasome Activator Complex
 gi|298508455|pdb|3L5Q|U Chain U, Proteasome Activator Complex
          Length = 227

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 19/194 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    KV ++    +++ F+G +AD+  L+E
Sbjct: 13  RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLS-FSGLNADSRILIE 71

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
           +   + + +   L               + + +     +R      LIA          +
Sbjct: 72  KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 131

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTN 177
                  +        IG                     + EE  +  +    ++ V T 
Sbjct: 132 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEV-VQTG 190

Query: 178 H-NIVLETLKVGDE 190
             NI +  +K   +
Sbjct: 191 AKNIEITVVKPDSD 204


>gi|226358651|gb|ACO51178.1| proteasome (prosome, macropain) subunit alpha type 5
           [Hypophthalmichthys nobilis]
          Length = 228

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/170 (11%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDTHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIG     A S+ + +     + ++  + +++I
Sbjct: 152 QLYHMDPSGTFVQCDARAIGPASEGAQSSLQEVYHKSMTLKDAIKSSLTI 201


>gi|3114272|pdb|1RYP|D Chain D, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114286|pdb|1RYP|R Chain R, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513415|pdb|1G65|C Chain C, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513429|pdb|1G65|Q Chain Q, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|20150379|pdb|1JD2|C Chain C, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150400|pdb|1JD2|X Chain X, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|93279370|pdb|2F16|C Chain C, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279384|pdb|2F16|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279658|pdb|2FNY|C Chain C, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279672|pdb|2FNY|Q Chain Q, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032204|pdb|2FAK|C Chain C, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032218|pdb|2FAK|Q Chain Q, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490845|pdb|2GPL|C Chain C, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490859|pdb|2GPL|Q Chain Q, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016369|pdb|3D29|C Chain C, Proteasome Inhibition By Fellutamide B
 gi|190016383|pdb|3D29|Q Chain Q, Proteasome Inhibition By Fellutamide B
 gi|197725323|pdb|3E47|C Chain C, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725337|pdb|3E47|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939214|pdb|3DY3|C Chain C, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939228|pdb|3DY3|Q Chain Q, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939242|pdb|3DY4|C Chain C, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939256|pdb|3DY4|Q Chain Q, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828239|pdb|3GPJ|C Chain C, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828253|pdb|3GPJ|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588323|pdb|3GPT|C Chain C, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588337|pdb|3GPT|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588351|pdb|3GPW|C Chain C, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588365|pdb|3GPW|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588545|pdb|3HYE|C Chain C, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588559|pdb|3HYE|Q Chain Q, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|330689383|pdb|3MG4|C Chain C, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689397|pdb|3MG4|Q Chain Q, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 241

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 19/194 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    KV ++    +++ F+G +AD+  L+E
Sbjct: 27  RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLS-FSGLNADSRILIE 85

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
           +   + + +   L               + + +     +R      LIA          +
Sbjct: 86  KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 145

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTN 177
                  +        IG                     + EE  +  +    ++ V T 
Sbjct: 146 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEV-VQTG 204

Query: 178 H-NIVLETLKVGDE 190
             NI +  +K   +
Sbjct: 205 AKNIEITVVKPDSD 218


>gi|11513994|pdb|1G0U|C Chain C, A Gated Channel Into The Proteasome Core Particle
 gi|11514008|pdb|1G0U|Q Chain Q, A Gated Channel Into The Proteasome Core Particle
          Length = 243

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 19/194 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    KV ++    +++ F+G +AD+  L+E
Sbjct: 29  RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLS-FSGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
           +   + + +   L               + + +     +R      LIA          +
Sbjct: 88  KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTN 177
                  +        IG                     + EE  +  +    ++ V T 
Sbjct: 148 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEV-VQTG 206

Query: 178 H-NIVLETLKVGDE 190
             NI +  +K   +
Sbjct: 207 AKNIEITVVKPDSD 220


>gi|6324535|ref|NP_014604.1| Pre6p [Saccharomyces cerevisiae S288c]
 gi|730374|sp|P40303|PSA7_YEAST RecName: Full=Proteasome component PRE6; AltName: Full=Macropain
           subunit PRE6; AltName: Full=Multicatalytic endopeptidase
           complex subunit PRE6; AltName: Full=Proteinase YSCE
           subunit PRE6
 gi|14488808|pdb|1FNT|D Chain D, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488822|pdb|1FNT|R Chain R, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765702|pdb|1Z7Q|D Chain D, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765716|pdb|1Z7Q|R Chain R, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|178847462|pdb|2ZCY|C Chain C, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847476|pdb|2ZCY|Q Chain Q, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847504|pdb|3BDM|C Chain C, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847518|pdb|3BDM|Q Chain Q, Yeast 20s Proteasome:glidobactin A-Complex
 gi|323462938|pdb|3NZJ|C Chain C, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462952|pdb|3NZJ|Q Chain Q, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462966|pdb|3NZW|C Chain C, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462980|pdb|3NZW|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462994|pdb|3NZX|C Chain C, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463008|pdb|3NZX|Q Chain Q, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|511905|gb|AAA34903.1| proteasome alpha-subunit [Saccharomyces cerevisiae]
 gi|1419833|emb|CAA99040.1| PRE6 [Saccharomyces cerevisiae]
 gi|151945595|gb|EDN63836.1| 20S proteasome alpha-type subunit [Saccharomyces cerevisiae YJM789]
 gi|190407307|gb|EDV10574.1| 20S proteasome alpha-type subunit [Saccharomyces cerevisiae
           RM11-1a]
 gi|207341354|gb|EDZ69436.1| YOL038Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273955|gb|EEU08874.1| Pre6p [Saccharomyces cerevisiae JAY291]
 gi|259149448|emb|CAY86252.1| Pre6p [Saccharomyces cerevisiae EC1118]
 gi|285814852|tpg|DAA10745.1| TPA: Pre6p [Saccharomyces cerevisiae S288c]
 gi|323303038|gb|EGA56841.1| Pre6p [Saccharomyces cerevisiae FostersB]
 gi|323331689|gb|EGA73103.1| Pre6p [Saccharomyces cerevisiae AWRI796]
 gi|323335672|gb|EGA76955.1| Pre6p [Saccharomyces cerevisiae Vin13]
 gi|323346599|gb|EGA80885.1| Pre6p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 254

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 19/194 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    KV ++    +++ F+G +AD+  L+E
Sbjct: 29  RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLS-FSGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
           +   + + +   L               + + +     +R      LIA          +
Sbjct: 88  KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTN 177
                  +        IG                     + EE  +  +    ++ V T 
Sbjct: 148 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEV-VQTG 206

Query: 178 H-NIVLETLKVGDE 190
             NI +  +K   +
Sbjct: 207 AKNIEITVVKPDSD 220


>gi|196008819|ref|XP_002114275.1| hypothetical protein TRIADDRAFT_50465 [Trichoplax adhaerens]
 gi|190583294|gb|EDV23365.1| hypothetical protein TRIADDRAFT_50465 [Trichoplax adhaerens]
          Length = 199

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 47/158 (29%), Gaps = 12/158 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +  +  V++A D        VM     K  +LG   ++   +G   D+    E + K 
Sbjct: 5   IGLTGEDFVLVASDSTAGRSVVVMNEAYDKTFKLGD-KVMMACSGDPGDSVQFAEFVAKN 63

Query: 79  LEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIADK------TITLVITGMGDVL 128
           +E Y  +   S    A        + + LR+     +              +        
Sbjct: 64  VELYRIKNGYSMTPNAAANYTRHQLAQSLRSSTPYTVNMLIGGYDEYDGPSLYYLDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
             +    A G G  +  S          S  E A K +
Sbjct: 124 LQKLPFGAHGYGSYFTFSILDRYYKKGMSKAE-ALKVL 160


>gi|48096769|ref|XP_392518.1| PREDICTED: proteasome subunit alpha type-3 [Apis mellifera]
          Length = 254

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 43/164 (26%), Gaps = 9/164 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +  T++ +R    +V A +  V+        N R        G  ++G    +     + 
Sbjct: 33  NGGTVIGLRGKDGIVFAVEKIVTSKLYEAGTNKRIFNIDQHVGMAVSGLISDARQIVEIA 92

Query: 73  ERLEKKLEQYPN--------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
                  +                S    A              ++   +     +    
Sbjct: 93  RSEASSYKSQYGIGIPLKYLNERVSMYMHAYTLYSAVRPYGCSVILGAYEHDGPAMYMID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +       A+G     A +    L  ++ +  E+ ++A  I
Sbjct: 153 PSGVSYGYYGCAVGKAKQSAKTEIEKLKLSEMTCNELVKEAARI 196


>gi|221054918|ref|XP_002258598.1| proteasome [Plasmodium knowlesi strain H]
 gi|193808667|emb|CAQ39370.1| proteasome, putative [Plasmodium knowlesi strain H]
          Length = 282

 Score = 56.9 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 5/87 (5%)

Query: 7   KHYAVKMH-----ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           +     +       TTI+ +  +  V++A D + S G  +    +RK+ R+ +       
Sbjct: 16  REDPYDIKTPISDGTTIIGIIYEHGVMLACDTRTSSGTLISNKCSRKINRINENIYACRS 75

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLR 88
             S+     +       L        +
Sbjct: 76  GASAHSQKVIELIKYFCLSMKCENRKK 102


>gi|71029644|ref|XP_764465.1| proteasome subunit alpha type [Theileria parva strain Muguga]
 gi|68351419|gb|EAN32182.1| proteasome subunit alpha type, putative [Theileria parva]
          Length = 239

 Score = 56.5 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
               ++ V+ +  VVIA + + +      + N +K+ +L +   +A FAG +ADA  L  
Sbjct: 28  RGGCVVGVKSNDAVVIAAERKSTTKLQDPRCN-KKILQLDENLALA-FAGLNADARVLAN 85

Query: 74  RLEKKLEQYPNQLLRSSV--ELAK--DWRMDKYLRNLEAMILIAD--------KTITLVI 121
           +   + ++Y   +  ++    +AK       KY       +                 + 
Sbjct: 86  KTRLECQRYKLNMDEAASVGYIAKYIARLQQKYTHKGGVRLFGVSLLIVGFDYNGKPALF 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                 +       +IG    +             S++E   +A KA+
Sbjct: 146 QTEPSGIYSSWKAQSIGKNSKHVQEYLEKNYKDDLSSDEAVMLAVKAL 193


>gi|146086176|ref|XP_001465480.1| 20S proteasome subunit alpha 5 [Leishmania infantum JPCM5]
 gi|134069578|emb|CAM67901.1| 20S proteasome subunit alpha 5, (putative) [Leishmania infantum
           JPCM5]
 gi|322498958|emb|CBZ34031.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 244

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 61/194 (31%), Gaps = 22/194 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T L +R    VV+A + +V     V+ ++  K+  +    I    +G  ADA  L+E 
Sbjct: 34  GSTSLGIRTPEGVVLAAEKRVPS-TLVVPSSMSKIMEIDSH-IATVMSGMVADARILVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDW--------------RMDKYLRNLEAMILIA--DKTIT 118
              + + +           +                 +     R     +LIA  D+   
Sbjct: 92  ARVESQNHRFTYNEPMSVESCTLATCDLSIQFGESGGKRKLMSRPFGVSLLIAGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +               AIG G   A S          + EE   +A   +    +    
Sbjct: 152 QLWQTDPSGTHTRYDAQAIGGGAEAAQSVFTERYHRNMTLEEGETLAVDILKQVME-DQL 210

Query: 176 TNHNIVLETLKVGD 189
           +  NI +  ++  D
Sbjct: 211 SPENIEVAVVRADD 224


>gi|68069127|ref|XP_676474.1| beta3 proteasome subunit [Plasmodium berghei strain ANKA]
 gi|56496189|emb|CAH97578.1| beta3 proteasome subunit, putative [Plasmodium berghei]
          Length = 204

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 56/206 (27%), Gaps = 38/206 (18%)

Query: 21  VRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           +     V IA D ++ S   T +  N  K+ ++     + G +G + D  +L E L  ++
Sbjct: 1   MTGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYV-GLSGLATDIQSLYELLRYRV 59

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------------- 120
             Y  +             +   L +        +  +                      
Sbjct: 60  NLYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKTNVYEPY 119

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADIC- 173
                 +G   E  +  +  G           ++           E   + +  A D   
Sbjct: 120 LNAYDLIGAKCETSD-FVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDC 178

Query: 174 -------VY--TNHNIVLETLKVGDE 190
                  VY  T   I+ + LK   +
Sbjct: 179 LSGWGAEVYVLTPDKIIKKKLKARMD 204


>gi|238496413|ref|XP_002379442.1| proteasome component Pup2, putative [Aspergillus flavus NRRL3357]
 gi|317147200|ref|XP_001821944.2| proteasome subunit alpha type-5 [Aspergillus oryzae RIB40]
 gi|220694322|gb|EED50666.1| proteasome component Pup2, putative [Aspergillus flavus NRRL3357]
          Length = 246

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V  +  V++  + +V+    +  ++  K+  + +    A  +G  ADA  L+E 
Sbjct: 34  GSTAIGVATNEGVILGVEKRVTS-TLLEASSVEKIVEIDQHIGCA-MSGLQADARNLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQNHAFHYAEPLRVESCTQAICDLALRFGETGDDEESVMSRPFGVALLIAGFDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLEEAETLVLKTLK 204


>gi|118429509|gb|ABK91802.1| endopeptidase subunit C8 [Clonorchis sinensis]
          Length = 257

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 18/174 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + +R    VV   +  V+  +   K   ++V  + K   +    G   DA  L+ 
Sbjct: 36  NSGTAIAIRGKDCVVFGVENIVTS-KLYEKGCVKRVYNIDKHIGMV-VVGFQVDAKALVN 93

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----------ILIADKTITLVIT 122
              ++   +     +     +   R+  Y+                 +   ++    +  
Sbjct: 94  VAREECSNFKENFGKPIPLYSLVERIGMYMHAHTLYSAIRPFGVSLLLGSYEEDGPHLYV 153

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
                L       AIG     A +    L  T+ S+ ++ ++A  I     +YT
Sbjct: 154 VEPSGLSFAYRGCAIGKAKQNATTEIEKLKPTELSSNDLVKEAAKI-----IYT 202


>gi|326501362|dbj|BAJ98912.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326508742|dbj|BAJ95893.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 237

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 67/185 (36%), Gaps = 20/185 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +V+    +  ++  K+  + +  +    +G  ADA TL+E 
Sbjct: 34  GSTAIGLMTKYGVVLAVEKRVTS-PLLEPSSVEKIMEIDEH-VGCAMSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                     +    AIGSG   A S+ +   + + +   AE IA   +    +  V T 
Sbjct: 152 YYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTIAEAETIALSILKQVMEEKV-TP 210

Query: 178 HNIVL 182
           +N+ +
Sbjct: 211 NNVDI 215


>gi|13541135|ref|NP_110823.1| proteasome subunit alpha [Thermoplasma volcanium GSS1]
 gi|20532212|sp|Q97BZ8|PSA_THEVO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|239061207|emb|CAZ48527.1| 20S proteasome alpha subunit [Thermoplasma volcanium GSS1]
          Length = 233

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 54/168 (32%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L ++    V++  D ++   + + + +  K++ +            +     +  
Sbjct: 33  KGSTALGLKFSNGVLLISDKKI-RSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDF 91

Query: 74  -RLEKKLEQ-------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+  + E+           L++   +  + +     +R     ++ A  D+    +   
Sbjct: 92  ARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDC 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSI 168
                  E    AIGSG    +S          S +E      KA+  
Sbjct: 152 DPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKA 199


>gi|227827674|ref|YP_002829454.1| proteasome subunit alpha [Sulfolobus islandicus M.14.25]
 gi|227830371|ref|YP_002832151.1| proteasome subunit alpha [Sulfolobus islandicus L.S.2.15]
 gi|229579189|ref|YP_002837587.1| proteasome subunit alpha [Sulfolobus islandicus Y.G.57.14]
 gi|229582059|ref|YP_002840458.1| proteasome subunit alpha [Sulfolobus islandicus Y.N.15.51]
 gi|229584878|ref|YP_002843380.1| proteasome subunit alpha [Sulfolobus islandicus M.16.27]
 gi|238619845|ref|YP_002914671.1| proteasome subunit alpha [Sulfolobus islandicus M.16.4]
 gi|284997877|ref|YP_003419644.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
 gi|259535055|sp|C3N5R0|PSA_SULIA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|259535059|sp|C4KHD9|PSA_SULIK RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|259535063|sp|C3MQ43|PSA_SULIL RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|259535067|sp|C3MVG1|PSA_SULIM RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|259535070|sp|C3NHC6|PSA_SULIN RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|259535074|sp|C3NEC6|PSA_SULIY RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|227456819|gb|ACP35506.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.S.2.15]
 gi|227459470|gb|ACP38156.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
 gi|228009903|gb|ACP45665.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
 gi|228012775|gb|ACP48536.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
 gi|228019928|gb|ACP55335.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
 gi|238380915|gb|ACR42003.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
 gi|284445772|gb|ADB87274.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
 gi|323474732|gb|ADX85338.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
 gi|323477460|gb|ADX82698.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
          Length = 241

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    VVIA + +      +   +  KV  +    +   FAG ++D   L++
Sbjct: 35  KGWTAIGIKSKSGVVIASEKR-KAQSLLDVDSIEKVFLIDDH-VGCSFAGLASDGRVLID 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
                  Q+            L +S  ++ + +     +R     ++IA  DK++  +  
Sbjct: 93  YARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYM 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
                       +AIG G   A            + E+   +A KA+S 
Sbjct: 153 TEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSA 201


>gi|68072469|ref|XP_678148.1| proteasome precursor [Plasmodium berghei strain ANKA]
 gi|56498519|emb|CAH93985.1| proteasome precursor, putative [Plasmodium berghei]
          Length = 270

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 62/222 (27%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            TTI+ +  +  V++A D + S G  V    +RK+ R+ +   +   G +  S     ++
Sbjct: 24  GTTIIGIIYEHGVMLACDTRTSSGTFVSNKCSRKINRINENIYVCRSGASAHSQKVIEVI 83

Query: 73  ERLEKKLEQYPNQLLR-------------------------SSVELAKDWRMDK------ 101
           +     ++    +  R                         ++  +AK+           
Sbjct: 84  KHYCASMKSENRKKGRFHENEVITDDINDEEIDIDQINNINNNNVIAKNKYYYNDKFMDY 143

Query: 102 -----YLRNLEAMILIADKT---ITLVITGMG-------------DVLEPENGVMAIGSG 140
                 +  +   ++ A+       L+  G                 +  +      GSG
Sbjct: 144 NPLVENVAYITKKLIYANNNFLSCGLIFGGYDKIKKQQLYSVNLNGSIIQKYDYAVSGSG 203

Query: 141 GSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
             Y  S  +       + +E   +    +  A    +Y N N
Sbjct: 204 SIYIQSYLQDKYKKNMTKKECFDLILNCVKYA----IY-NDN 240


>gi|281206885|gb|EFA81069.1| proteasome subunit alpha type 5 [Polysphondylium pallidum PN500]
          Length = 243

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 73/196 (37%), Gaps = 23/196 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++ +  VV+A + +++    +  ++ +KV  +   ++I   +G +AD+ T+++ 
Sbjct: 34  GSTAIGIQCEEGVVLAVEKRLTS-TLLEPSSIQKVVEID-YHLICAMSGLTADSRTIIDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD---------------KYLRNLEAMILIA--DKTI 117
              + + +           +    +                K  R     +LIA  D+  
Sbjct: 92  ARIETQNHRFNFDEPMGVESCVQSICDLALRFGENRKEGEEKMSRPFGVALLIAGVDERG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
             +          +    AIG+G   A    +   S   +   A+++A   +    +  +
Sbjct: 152 PSLYHSDPSGTFTQYNAKAIGAGSEGAQITLQEKYSKTLTLIEAQQLALTTLKQVMEEAI 211

Query: 175 YTNHNIVLETLKVGDE 190
            T  N+ +  +   D+
Sbjct: 212 -TTTNVEVAVITKKDK 226


>gi|222479394|ref|YP_002565631.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
 gi|222452296|gb|ACM56561.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
          Length = 267

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 61/194 (31%), Gaps = 23/194 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR +  VV+A D +      +   +  K+ +      +A  AG  ADA  L++
Sbjct: 35  RGTASVGVRAEDGVVLAADKRA-RSPLMEPESIEKLHKADDHVGVA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTI--TLVIT 122
              ++ +    +   +           +  + +      R     +++         +  
Sbjct: 93  FARRQAQINRLRYGEAIGIETLTKNITDHIQQYTQIGGARPFGVALIVGGIENGEPRLFE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH---- 178
                   E   ++IGS  S              S +E    A+   A     +N     
Sbjct: 153 TDPSGTPYEWQALSIGSDRSDLRDYLEEEYEEGLSTDEAVALALDTLAQ----SNDGELS 208

Query: 179 --NIVLETLKVGDE 190
              + + T+ V DE
Sbjct: 209 PEGVGVATITVDDE 222


>gi|328773136|gb|EGF83173.1| hypothetical protein BATDEDRAFT_84713 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 250

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + +R    VV+A +  V     V  +N R+++ + +   + G AG  AD+  L+ 
Sbjct: 33  NSGTCIGIRAKDGVVLAHEKLVQSKLLVPGSN-RRIQTVDQHIGMVG-AGLLADSRHLVT 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++   Y +             R+ +Y+             +  +I   D     +  
Sbjct: 91  RARQEAANYKDNYKSPIPSKMIADRVAQYVSAFTLYSSVRPFGIATIIASMDTHGPALYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       A+G G   A +    L  T+ +A E  ++A  I
Sbjct: 151 IEPSGVFYGYNGCAVGKGKQVAKTEIEKLKFTELTAREAVKEAARI 196


>gi|299470780|emb|CBN79826.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 218

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 14/157 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L +  +G VV+A D QV+    + K N  K+  L     +A  AG  +D  +  E + 
Sbjct: 3   TLLGIAGEGFVVLAADAQVARSILLYKNNMDKIAHLADNKALAC-AGPQSDCVSFTEYIS 61

Query: 77  KKLEQYPNQLLRSSV----------ELAKDWRMDKYLRNLEAMILI---ADKTITLVITG 123
           K +  Y                   ELAK  R   +   L    +    A K    +   
Sbjct: 62  KNMALYELNNDVKLTTKAAATFIRGELAKALRKGPFQTQLLMGGVDKREAGKDEASLFWL 121

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                  +    A G G ++ LS          S +E
Sbjct: 122 DYLGTLQKVPYGAHGYGAAFTLSVMDREYVKGLSLDE 158


>gi|7527328|dbj|BAA94258.1| proteasome subunit LMP7 [Xenopus laevis]
 gi|7527330|dbj|BAA94259.1| proteasome subunit LMP7 [Xenopus laevis]
 gi|7527336|dbj|BAA94262.1| proteasome subunit LMP7A [Xenopus laevis/gilli]
 gi|7527342|dbj|BAA94265.1| proteasome subunit LMP7A [Xenopus laevis/gilli]
 gi|7527346|dbj|BAA94267.1| proteasome subunit LMP7A [Xenopus muelleri]
 gi|7527348|dbj|BAA94268.1| proteasome subunit LMP7A [Xenopus muelleri]
 gi|7527363|dbj|BAA94273.1| proteasome subunit LMP7A [Xenopus ruwenzoriensis]
          Length = 87

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 1/88 (1%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++A D + S G  +      KV  +    ++   +GS+AD       L K+   Y  +  
Sbjct: 1   IVAVDSRASAGSYISTIKFNKVIEINPY-LLGTMSGSAADCQYWERLLAKECRLYQLRNN 59

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADK 115
                 A    M   +       L    
Sbjct: 60  SRISVSAASKLMCNMMLQYRGTGLSVGS 87


>gi|328873688|gb|EGG22055.1| proteasome subunit alpha type 7 [Dictyostelium fasciculatum]
          Length = 252

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 61/191 (31%), Gaps = 21/191 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR   V+++  + + +        + RK+ ++     +  FAG +AD+  L+ 
Sbjct: 31  KGTVAIGVRGKDVIILGVEKKSTAKLQDA-RSIRKIVKIDDHICL-TFAGLTADSRVLIN 88

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           +   + + Y   L  +      +  +A   +       +    +              + 
Sbjct: 89  KALVECQSYRLSLDDTPTVEYIAKYIAGIQQRYTQSGGVRPFGISTLIVGFDSDGTPRLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE--EIARKAMSIAADICVYTNH- 178
                         AIG              +  + AE  ++A +A+    +    + + 
Sbjct: 149 QTDPSGSFSSWKAAAIGRNSKAVSEFLEKNYTDNSDAESIKLAVRALLEVVE----SGNK 204

Query: 179 NIVLETLKVGD 189
           NI +  ++   
Sbjct: 205 NIEIAIIRRNQ 215


>gi|238879914|gb|EEQ43552.1| proteasome component PRE6 [Candida albicans WO-1]
          Length = 250

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 59/187 (31%), Gaps = 16/187 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    K+ ++    ++A FAG +ADA  L++
Sbjct: 29  RGTCAVGVKGKNTVVLGCEKRTALKLQDPRITPSKICKVDHHILLA-FAGLNADARILVD 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   L            +A   +       +    +            +  +
Sbjct: 88  KARVEAQSHKLTLEDPVSVEYLTKYVAGVQQKYTQSGGVRPFGIATLIAGFDVRDDVPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-N 179
                  +       AIG                  S EE  +  +    ++ V T   N
Sbjct: 148 FQTEPSGVFNAWKAHAIGRSSKTVKEFLEKHYEEDLSEEETIKLTVKSLLEV-VQTGAKN 206

Query: 180 IVLETLK 186
           I +  LK
Sbjct: 207 IEVSVLK 213


>gi|168018248|ref|XP_001761658.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687029|gb|EDQ73414.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 219

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 54/183 (29%), Gaps = 13/183 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I  +  DG  ++  D        V K N  K+  L    ++ G  G S D     E ++K
Sbjct: 4   IFGLVGDGFALVVTDTSQVQSIVVQKTNEDKIMILDSHKLL-GVTGESGDRVQFSEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K    +  MI   DK     +        
Sbjct: 63  NILLYQYRNGIPLSTSAAANFTRGELATALRKNPYEVNMMIAGWDKDQGPSLYYLDYIST 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLETL 185
             +     +G G  + LS          S   A E+    +       V +  N +++ +
Sbjct: 123 LHKVEKGGMGYGAYFLLSLMDRYYEKNMSLEKALELVDMCIEEVRSRLVVSPPNFIIKIV 182

Query: 186 KVG 188
              
Sbjct: 183 DKD 185


>gi|242209688|ref|XP_002470690.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730267|gb|EED84127.1| predicted protein [Postia placenta Mad-698-R]
          Length = 194

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 48/152 (31%), Gaps = 12/152 (7%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +   G V++A D   +     MK +  K++ L    ++  F+G   D     E +E+ +
Sbjct: 6   ALTGKGYVIVAADTTAARSIVKMKTDEDKIKVLSPH-LLMAFSGEPGDTLQFAEYVERNI 64

Query: 80  EQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIADKTI----TLVITGMGDVL 128
             Y  +   +    +    + + L       R     +LI           +        
Sbjct: 65  RLYQIRNTYALRPPSAASWIRRSLADSLRSRRPYAVNLLIGGYDTSTSTPHLYWVDYLGT 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                  A G G  + LS        + + EE
Sbjct: 125 LSPVPFGAHGYGSYFGLSLLDRYHDPEATLEE 156


>gi|325120595|emb|CBZ56149.1| Alpha 2 subunit of 20S proteasome (ISS), related [Neospora caninum
           Liverpool]
          Length = 258

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 55/174 (31%), Gaps = 23/174 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V++A + +++    +   + +K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAVGIQTKDGVILASERRITS-CLLDHQSIQKIVEIDDHIACA-MSGLIADARTLIDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKD----------------WRMDKYLRNLEAMILIA--DKT 116
              +   +           +                   R     R     +L+A  D  
Sbjct: 92  ARVECANHFFTYNEKMSIHSCIDSVADLALDFSDVSDGRRKKMMSRPFGVALLVAGVDDQ 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
              +          +   +A+GS    A +  +   S   S   AE +    + 
Sbjct: 152 GPSLWCADPSGTVTKYQAVALGSAQEGAETMLQEQYSQSMSFEDAEALVLVVLR 205


>gi|67623727|ref|XP_668146.1| proteasome subunit beta type 1 (20S proteasome alpha subunit F)
           (20S proteasome subunit beta-6) [Cryptosporidium hominis
           TU502]
 gi|54659317|gb|EAL37899.1| proteasome subunit beta type 1 (20S proteasome alpha subunit F)
           (20S proteasome subunit beta-6) [Cryptosporidium
           hominis]
          Length = 107

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 23/70 (32%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                   +  + + V  D  VVIA D ++S    +   +  K  +L    I+A     +
Sbjct: 35  HNFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGMLA 94

Query: 66  ADAFTLLERL 75
                    L
Sbjct: 95  DINALRKTLL 104


>gi|297835202|ref|XP_002885483.1| hypothetical protein ARALYDRAFT_479726 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331323|gb|EFH61742.1| hypothetical protein ARALYDRAFT_479726 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 258

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        +A K+ ++        AG    +      
Sbjct: 38  NAGSAIGILSTDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINT 97

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 98  AR-VQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLY 156

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         A+G+    A S  +       + EE    A+ +
Sbjct: 157 MSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKV 203


>gi|255626205|gb|ACU13447.1| unknown [Glycine max]
          Length = 204

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 49/152 (32%), Gaps = 10/152 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  +G  ++  D        V K+N  K+  L    +IA  +G   D     E ++K
Sbjct: 4   VFGLVGNGFAIVVADSSAVHSILVHKSNEDKIMLLDSHKLIAA-SGEPGDRVQFTEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K   ++  ++   DK     +        
Sbjct: 63  NVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPELYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +    A G G  ++LS       +  S EE
Sbjct: 123 LHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEE 154


>gi|156081746|ref|XP_001608366.1| proteasome precursor [Plasmodium vivax SaI-1]
 gi|148800937|gb|EDL42342.1| proteasome precursor, putative [Plasmodium vivax]
          Length = 282

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)

Query: 7   KHYAVKMH-----ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           +     +       TTI+ +  +  V++A D + S G  V    +RK+ R+ +       
Sbjct: 16  REDPYNIKTPISDGTTIIGIIYEHGVMLACDTRTSSGTLVSNKCSRKINRINENIYACRS 75

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLR 88
             S+     +       L        +
Sbjct: 76  GASAHSQKVIELIKHFCLSMKCENRKK 102


>gi|7527344|dbj|BAA94266.1| proteasome subunit LMP7A [Xenopus borealis]
          Length = 87

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 1/88 (1%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++A D + S G  +      KV  +    ++   +GS+AD       L K+   Y  +  
Sbjct: 1   IVAVDSRASAGSYISDVKFNKVIEINPY-LLGTMSGSAADCQYWERLLAKECRLYQLRNN 59

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADK 115
                 A    M   +       L    
Sbjct: 60  SRISVSAASKLMCNMMLQYRGTGLSVGS 87


>gi|294658445|ref|XP_460784.2| DEHA2F09724p [Debaryomyces hansenii CBS767]
 gi|202953136|emb|CAG89125.2| DEHA2F09724p [Debaryomyces hansenii]
          Length = 259

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 59/170 (34%), Gaps = 17/170 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    +V+A +  ++    V   N ++++ + +   +A ++G   D    + 
Sbjct: 33  NGGTSIGIKCKDGIVLAVEKIINSKLLVPGKN-KRIQTIDRHIGVA-YSGLLPDGRHFVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   + + + N             R+  Y+             + +++   D+    +  
Sbjct: 91  RGRDEAQNFKNIYKTPISVPHLMDRLGIYIQNYTCYNSVRPFGIVSIVGGVDENGPHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                        A G G   A S    L   + +     ++A+ +AA I
Sbjct: 151 IEPSGTCWGYTGAATGKGRQTAKSELEKLNFEELT----VKEAVKVAAKI 196


>gi|115932371|ref|XP_001175833.1| PREDICTED: similar to Psmb3 protein [Strongylocentrotus purpuratus]
          Length = 99

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             +  + + ++ +     V IA D +  +    +  NA+K+  +G    + G +G + D 
Sbjct: 2   SIMSYNGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYL-GLSGLATDI 60

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN 105
            T+  RL+ +L  Y  +  R          +   L  
Sbjct: 61  TTVSNRLKFRLNLYTLRENRDVKPETFMSMVSNLLYE 97


>gi|254573664|ref|XP_002493941.1| Alpha 3 subunit of the 20S proteasome, the only nonessential 20S
           subunit [Pichia pastoris GS115]
 gi|238033740|emb|CAY71762.1| Alpha 3 subunit of the 20S proteasome, the only nonessential 20S
           subunit [Pichia pastoris GS115]
          Length = 252

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 59/189 (31%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T + V  +  VV+A + +V+       ++A K+  L    I A    ++     +  
Sbjct: 30  HAGTAIGVLANDGVVLAAEKKVTSKLLEQDSSAEKMYILNDNMICAVAGMTADAGILINN 89

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VIT 122
            R+  +              L +     K        LR      + A         + T
Sbjct: 90  VRITAQGYLKTYNENIPCEMLVRHLCDIKQGYTQHGGLRPFGVSFIYAGYDERYGFQLYT 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                        ++G+  S A +  +       + EE   +A K +S   D    T+  
Sbjct: 150 SNPSGNYSGWKATSVGANNSSAQTLLKQDYKNDINLEEAKNLALKVLSKTMDSSSLTSEK 209

Query: 180 IVLETLKVG 188
           I   T+   
Sbjct: 210 IEFATITKN 218


>gi|195035353|ref|XP_001989142.1| GH11559 [Drosophila grimshawi]
 gi|193905142|gb|EDW04009.1| GH11559 [Drosophila grimshawi]
          Length = 206

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ ++    +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHAHSVIVMKEDENKIHKVADNLLIST-VGESGDTEQFTEFIA 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIAD--KTITLVITGMGD 126
           K +  Y  +        +      K L        R    M +          +      
Sbjct: 62  KNIALYKMRNGYDLSPRSAAHFTRKNLAESLRSRTRYQVFMFVAGYDPNEGPELTFIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G G  +  S          + EE
Sbjct: 122 ASSKSLNYAGHGYGSMFCASIFDRYWHPNITQEE 155


>gi|15233580|ref|NP_193216.1| PBD2 (20S PROTEASOME BETA SUBUNIT 2); peptidase/ threonine-type
           endopeptidase [Arabidopsis thaliana]
 gi|17380180|sp|O24633|PSB2B_ARATH RecName: Full=Proteasome subunit beta type-2-B; AltName: Full=20S
           proteasome beta subunit D-2; AltName: Full=Proteasome
           component GA; AltName: Full=Proteasome subunit beta
           type-4
 gi|2244837|emb|CAB10259.1| proteasome chain protein [Arabidopsis thaliana]
 gi|2511572|emb|CAA73618.1| multicatalytic endopeptidase [Arabidopsis thaliana]
 gi|3421114|gb|AAC32071.1| 20S proteasome beta subunit PBD2 [Arabidopsis thaliana]
 gi|7268226|emb|CAB78522.1| proteasome chain protein [Arabidopsis thaliana]
 gi|21592467|gb|AAM64418.1| proteasome chain protein [Arabidopsis thaliana]
 gi|88193794|gb|ABD42986.1| At4g14800 [Arabidopsis thaliana]
 gi|110735665|dbj|BAE99813.1| proteasome chain protein [Arabidopsis thaliana]
 gi|332658100|gb|AEE83500.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
          Length = 199

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 13/161 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  +G  ++A D        + K    K+  L    ++A  +G   D     E ++K
Sbjct: 4   VFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAA-SGEPGDRVQFTEYVQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            +  Y  +        A            + K   ++  ++   DK     +        
Sbjct: 63  NVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
             +    A G G  ++LS       +  S   A E+  K +
Sbjct: 123 LHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCI 163


>gi|217071348|gb|ACJ84034.1| unknown [Medicago truncatula]
          Length = 204

 Score = 56.5 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 16/167 (9%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +      ++  D        V K+N  K+  L    ++A  +G   D     E ++K
Sbjct: 4   VFGLVGTDFAIVVADTSAVHSILVHKSNEDKIMFLDSHKLVAA-SGEPGDRVQFTEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K   ++  ++   DK     +        
Sbjct: 63  NVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI 172
             +    A G G  ++LS       +  S EE   +  K +   A+I
Sbjct: 123 LHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCI---AEI 166


>gi|74317865|ref|YP_315605.1| hypothetical protein Tbd_1847 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057360|gb|AAZ97800.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 190

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 52/173 (30%), Gaps = 18/173 (10%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG------QTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           TT+  VRK+G + IA D     G        V     + +R       I G A       
Sbjct: 2   TTVAVVRKEGRIAIAADTLTKWGGGKESADYVANHE-KIIRVGDSYVAITGSATFKLILA 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA----------MILIADKTITL 119
              E L++         +            + Y                M ++      +
Sbjct: 61  DYFESLDEPPRLDSVGEIFRVWNTLHGALKEHYYLQTGDDKEEDLESSRMDVLIASPRGI 120

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEEIARKAMSIAAD 171
                   ++  +   A GSG  YAL A  A        AE +AR  +  AA+
Sbjct: 121 FGVAAHRTVQEFSKFYAYGSGSPYALGAMYAAFRAPSLDAEGVARLGVMAAAE 173


>gi|66813358|ref|XP_640858.1| proteasome subunit alpha type 4 [Dictyostelium discoideum AX4]
 gi|464458|sp|P34119|PSA4_DICDI RecName: Full=Proteasome subunit alpha type-4; AltName:
           Full=Proteasome component DD4
 gi|347509|gb|AAA33233.1| proteasome [Dictyostelium discoideum]
 gi|60468781|gb|EAL66781.1| proteasome subunit alpha type 4 [Dictyostelium discoideum AX4]
          Length = 250

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 21/189 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL-- 71
           HA   + +     +V+A + + +        +  +       +++   AG ++DA  L  
Sbjct: 30  HAGATVGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGITSDANILIN 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKD-------WRMDKYLRNLEAMILIADKTITL---VI 121
             RL  +   Y  Q      +L          +     LR      L A         + 
Sbjct: 90  YARLSSQRFFYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGFQLY 149

Query: 122 TGMGDVLEPENGVMAIGS-GGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                         +IG      A S  R+      S   A ++A K ++   D      
Sbjct: 150 QSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPDISLKEALQLALKVLTKTMDR----- 204

Query: 178 HNIVLETLK 186
            NI  E L+
Sbjct: 205 SNINSEKLE 213


>gi|1498589|gb|AAB93421.1| 20S proteasome alpha subunit PSMA5 [Drosophila melanogaster]
          Length = 244

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 20/164 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    V      K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTPEGVVLAVEKRITSPLMVPS-TVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKT-- 116
              + + +           +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAG 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +           +G  AIGSG   A    + L     + +E
Sbjct: 152 QPQLWHMDPSGTFVGHGAKAIGSGSEGAQQNLQDLFRPDLTLDE 195


>gi|71008188|ref|XP_758193.1| hypothetical protein UM02046.1 [Ustilago maydis 521]
 gi|46097865|gb|EAK83098.1| hypothetical protein UM02046.1 [Ustilago maydis 521]
          Length = 272

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 17/171 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T++ +     +V+A + +V+        ++ K+  +    ++AG AG +ADA +L+ 
Sbjct: 30  HAGTVIGILAKDGIVLAAEKKVTSKLLEQDQSSEKIFAVSDN-VMAGVAGYTADANSLVN 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIA---DKTITLVI 121
                 +QY               R+  Y         LR     IL A   D     + 
Sbjct: 89  FARNAAQQYLASYDDDMPVEQLAQRLCDYKQGYTQFGGLRPFGVSILYAGYDDHHHFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                          IG+    A S  +             + AM++A  I
Sbjct: 149 HSDPSGNYSGWKATCIGNNNGTATSLLKQDYKDDLG----IQDAMAMAVKI 195


>gi|332376360|gb|AEE63320.1| unknown [Dendroctonus ponderosae]
          Length = 254

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 60/166 (36%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+A +  +         N R        +I  GF+G  ADA  +++
Sbjct: 33  NSGTVIGLKGSDGIVLAAEKLILSKLHERTTNQRLFNI--DKHIGMGFSGLIADARQIVQ 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
              K+  +Y  Q   S      + R+  Y+                +++  +    ++ T
Sbjct: 91  IARKEAAEYRQQFGTSIPLKYLNDRVSMYMHAYTLYSAIRPYGCSVILISYENDEPVMYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +   N   A G     A +    L   + +  E+ ++A  I
Sbjct: 151 IDPSGISYGNHGCATGKAKQSAKTEIEKLKLGRLTCRELVKEAAKI 196


>gi|320168542|gb|EFW45441.1| proteasome beta 4 subunit [Capsaspora owczarzaki ATCC 30864]
          Length = 268

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 55/192 (28%), Gaps = 24/192 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L ++  G VV+A D   S G      N  ++  +G   ++A     +   +     
Sbjct: 57  GTSVLAIKYAGGVVVAADTCGSYGSLAKFRNISRMNTVGSKTLLAMSGDYADYQYVKKTL 116

Query: 75  LEKKLEQYPNQLLRSSVELAKD--------WRMDKYLRNLEAMILIADKT-ITLVITGMG 125
            +  +E             +           R  K        ++         + T   
Sbjct: 117 DDLVIEDECVNDGHQLSSSSIFSYLSRVMYNRRSKIDPLWNTFVVAGSSNGQPFLGTVDK 176

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM--STQNS---AEEIARKAMSIAADIC------- 173
             +      +A G G   AL   R     +   +   A+ +  + + +            
Sbjct: 177 VGVAYTENHIATGYGAYMALPLMRDAYAANPNMTLEQAQTVINECLKVMYYRDARSWNQY 236

Query: 174 ---VYTNHNIVL 182
              V TN  + +
Sbjct: 237 EMAVITNDGVSI 248


>gi|268566107|ref|XP_002639636.1| C. briggsae CBR-PAS-4 protein [Caenorhabditis briggsae]
 gi|187029485|emb|CAP31341.1| CBR-PAS-4 protein [Caenorhabditis briggsae AF16]
          Length = 253

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 19/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    +VI  + + S+         RK+  +    ++A FAG SADA  L++
Sbjct: 29  KGSTAVGVRGKDCIVIGVEKK-SIPALQDDRTIRKIHMIDDHVMLA-FAGLSADARVLVD 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTI---TLVI 121
           R   + + Y   L            +             R     +LI          + 
Sbjct: 87  RARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAMS 167
                    E    + G G            S + +A+E     +  K+++
Sbjct: 147 KTEPSGAYYEYVANSTGRGEKPVREYLEEHYSEETTADEATTLKLVVKSLA 197


>gi|224031643|gb|ACN34897.1| unknown [Zea mays]
          Length = 249

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 59/164 (35%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  V+    +  +N R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSN-RRIHSVHRHSGLA-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RTKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                +  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|242019386|ref|XP_002430142.1| proteasome subunit alpha type 7-1, putative [Pediculus humanus
           corporis]
 gi|212515233|gb|EEB17404.1| proteasome subunit alpha type 7-1, putative [Pediculus humanus
           corporis]
          Length = 251

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 31  KGSTAVGVRGQNCVVLGVEKK-SVAKLQEDRTVRKICLLDDH-VVMAFAGLTADARILIN 88

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R      + +      R      L+A         + 
Sbjct: 89  RAQIECQSHKLTVEDPVTLEYITRYIASKNQKYTQSNGRRPFGISCLVAGFDYDGAPHLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                    T++ A ++A KA+
Sbjct: 149 QTEPSGIFYEWKANATGRSAKTVKEFLEKYYADEEVETESGAVKLAIKAL 198


>gi|45198836|ref|NP_985865.1| AFR318Wp [Ashbya gossypii ATCC 10895]
 gi|44984865|gb|AAS53689.1| AFR318Wp [Ashbya gossypii ATCC 10895]
          Length = 251

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 54/166 (32%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        ++ K+ RL       +AG    +      
Sbjct: 31  HAGTAIGIMAKDGIVLAAERKVTSKLLEQDTSSEKLYRLNDNITVAVAGLTADAEILVNT 90

Query: 72  LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                +  L+ Y  +     L+R   ++ + +     LR      + A         + T
Sbjct: 91  ARLHAQNYLKMYNEEIPVEVLVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDARYGYQLYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                       +++G+      +  +       + ++  + A+  
Sbjct: 151 SNPSGNYSGWKAISVGANTQAVQTLLQMDYKDDLTFDDAIKLALKT 196


>gi|54696300|gb|AAV38522.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
           sapiens]
          Length = 241

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 59/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           A+T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  ASTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLII 201


>gi|242787874|ref|XP_002481105.1| proteasome component Pup2, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218721252|gb|EED20671.1| proteasome component Pup2, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 245

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-SLLETSSVEKIVEIDQHIGCA-MSGLQADARSMIEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +      S    +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQNHAFHFAESLRVESCTQAICDLALRFGEGAEGEESVMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|193638896|ref|XP_001945383.1| PREDICTED: proteasome subunit alpha type-5-like [Acyrthosiphon
           pisum]
          Length = 262

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 53/194 (27%), Gaps = 23/194 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+  + +++    +      K+  + K    A  +G  AD+ T++ER
Sbjct: 34  GSTAIGICTPEGVVLGVEKRITSPLMITSK-IEKIFEVDKHIGCA-VSGLIADSRTMVER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-----------------MILIADKTI 117
              + + +           +    +                          M    D   
Sbjct: 92  ARAESQNHWFTYNEQMSVESVAQAVSNLAIQFSGDYDSKEPAMSRPFGVAIMFAGIDNNG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICV 174
             +          +    AIGSG   A    +           A  +    +    +   
Sbjct: 152 PQLFHLDPSGTYVQYNAKAIGSGSEGAQQTLQEKYHKSMGLNEAINVILNILKQVME-DK 210

Query: 175 YTNHNIVLETLKVG 188
            +  NI + T+   
Sbjct: 211 LSPTNIEIVTVTPD 224


>gi|201066706|gb|ACH92666.1| 20S proteasome subunit alpha 5 [Leishmania donovani]
          Length = 244

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 61/194 (31%), Gaps = 22/194 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T L +R    VV+A + +V     V+ ++  K+  +    I    +G  ADA  L+E 
Sbjct: 34  GSTSLGIRTPEGVVLAAEKRVPS-TLVVPSSMSKIMEIDSH-IATVMSGMVADARILVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDW--------------RMDKYLRNLEAMILIA--DKTIT 118
              + + +           +                 +     R     +LIA  D+   
Sbjct: 92  ARVESQNHRFTYNEPMSVESCTLATCDLSIQFGEGGGKRKLMSRPFGVSLLIAGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +               AIG G   A S          + EE   +A   +    +    
Sbjct: 152 QLWQTDPSGTHTRYDAQAIGGGAEAAQSVFTERYHRNMTLEEGETLAVDILKQVME-DQL 210

Query: 176 TNHNIVLETLKVGD 189
           +  NI +  ++  D
Sbjct: 211 SPENIEVAVVRADD 224


>gi|212276233|ref|NP_001130843.1| hypothetical protein LOC100191947 [Zea mays]
 gi|194690254|gb|ACF79211.1| unknown [Zea mays]
 gi|195606230|gb|ACG24945.1| proteasome subunit alpha type 4 [Zea mays]
          Length = 250

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A + L +     VV+ G+ +V+        +A K+ ++       +AG    +      
Sbjct: 30  NAGSALGILAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QL++S  +  + +     LR      L A         +  
Sbjct: 90  ARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A+G+    A S  +       + EE    A+ +
Sbjct: 150 SDPSGNYGGWKAAAVGANSQAAQSMLKQDYKDALTREEAVGLALKV 195


>gi|32401291|gb|AAP80818.1| proteasome chain protein [Griffithsia japonica]
          Length = 187

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 17/159 (10%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTV--MKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            +I+ ++    V+IA D  VS  +++  MK +  K+R+L +G + A  AG   D     E
Sbjct: 3   GSIIALQGADYVLIAAD--VSCARSIVVMKDDMDKIRQLDEGKLFAA-AGVPGDVTKFSE 59

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR----MDKYLRN--------LEAMILIADKTITLVI 121
            ++K +  Y  +   S    A        +  +LR         +       +     + 
Sbjct: 60  HVQKDVRLYSLRSGISMSTAAVANYTRGELAHFLRRSPFQCNVIIGGYDKAPNGDGPSLY 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           +        +    A G    + LS          S +E
Sbjct: 120 SCDYLGTLTKLTFAAEGYAQYFVLSTLDRYWKKGMSLDE 158


>gi|326437164|gb|EGD82734.1| hypothetical protein PTSG_03383 [Salpingoeca sp. ATCC 50818]
          Length = 196

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 42/152 (27%), Gaps = 11/152 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     V+ A D   +     MK++  K+  L     +   AG   D     + ++  
Sbjct: 5   IALVGKDFVLTAADSASARSIMRMKSDMDKMIPLSSH-ALMLLAGPVGDCSNFGDYIQAN 63

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK-TITLVITGMGDVL 128
           L+         +   A               +    + ++I   D+     +        
Sbjct: 64  LKLQALTNGFEASTHATANYVRKNIADALRSRGAYQVNSLIAGVDEQDGPSLYYLDYLGT 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +    A G G  +  +          S EE
Sbjct: 124 MVKVPYGAHGYGSFFTFATLDHHYREGMSLEE 155


>gi|19115284|ref|NP_594372.1| 20S proteasome component alpha 5, Pup2 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|12229941|sp|Q9UT97|PSA5_SCHPO RecName: Full=Probable proteasome subunit alpha type-5
 gi|5777696|emb|CAB53405.1| 20S proteasome component alpha 5, Pup2 (predicted)
           [Schizosaccharomyces pombe]
          Length = 247

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 19/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V+    VV+  + +++    +   +  K+  +      A  +G +ADA T++E 
Sbjct: 34  GSTAIGVKTKDAVVLGVEKRLTS-PLMESHSVEKLFEIDSHIGCA-ISGLTADARTIIEH 91

Query: 75  LEKKLEQYPNQ---------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTI 117
              + + +              +S  +LA         + R+      +  +I   D+  
Sbjct: 92  ARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A S          + EE
Sbjct: 152 PQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEE 194


>gi|303314849|ref|XP_003067433.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240107101|gb|EER25288.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320037788|gb|EFW19725.1| proteasome component Pre1 [Coccidioides posadasii str. Silveira]
          Length = 205

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 45/153 (29%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++K+   K R+L K  ++A ++G + D     E ++  
Sbjct: 5   LGITGKDFTLIAASKAAMRGPTILKSTDDKTRKLNKHTLLA-YSGEAGDTVQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELAKDW-----------RMDKYLRNLEAMILIADKTITLVITGMGDV 127
            + Y  +        A                  Y  NL    +        +       
Sbjct: 64  AQLYSMRNETELSPSAVANFVRGELARSLRSRSPYTVNLLLGGVDPITQKPSLYWLDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +    A G    Y LS          S EE
Sbjct: 124 SLAQVPYAAHGYAQYYCLSILDKHHHPDISYEE 156


>gi|195041456|ref|XP_001991259.1| GH12557 [Drosophila grimshawi]
 gi|193901017|gb|EDV99883.1| GH12557 [Drosophila grimshawi]
          Length = 249

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGGNCVVLGVEKK-SVAKLQEDRTVRKICVLDHH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +              +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T+  A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKTVREFFEKTYREEEVATERGAVKLAIRAL 197


>gi|222479869|ref|YP_002566106.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
 gi|222452771|gb|ACM57036.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
          Length = 194

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 3/177 (1%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ V     + IAGD QV  G++V     ++V  +    +       +   F     + 
Sbjct: 3   TVVAVETPTGIAIAGDTQVVDGESVSSDQFQRVFDVRGVGVGVVGESGAVQQFRQWFDVA 62

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-ITLVITGMGDVLEPENGVM 135
            +   +          +A+    +     ++A++   D      +     D    ++GV 
Sbjct: 63  LQDRGFEGDDTIDIDAVARIAARETERAGVDAVVGAHDDDGAASLRQIASDGRVLDSGVA 122

Query: 136 AIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNHNIVLETLKVGDE 190
           A+G+G + AL    AL   +  N      R  +    +  V T   I + TL   D+
Sbjct: 123 ALGTGSAVALGLLEALDMDEAANDPATAVRNVLETVMERDVDTGGEIDVWTLGSADQ 179


>gi|209730414|gb|ACI66076.1| Proteasome subunit beta type-4 precursor [Salmo salar]
          Length = 256

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 60/194 (30%), Gaps = 15/194 (7%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L V+  G V+IA D     G      N  ++ ++    I+      +   
Sbjct: 40  NPM-VTGTSVLGVKFTGGVIIAADMLGFYGSLARFRNISRLMKVNDTTILGASGDYADYQ 98

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIADKTITLVITGMGD 126
           +      +  +++       S    A    + +  Y R  +   L     +     G   
Sbjct: 99  YMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVVGGFYNGESF 158

Query: 127 VLEP-------ENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICV 174
           +          E   +A G G   A    R ++      T++ A  +  + + +      
Sbjct: 159 LGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIDRCLKVLYYRDA 218

Query: 175 YTNHNIVLETLKVG 188
            + +   +  +   
Sbjct: 219 RSYNRHEIAIVTEE 232


>gi|1709761|sp|P52427|PSA4_SPIOL RecName: Full=Proteasome subunit alpha type-4; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit alpha-3; AltName: Full=Proteasome 27 kDa subunit
 gi|1262146|emb|CAA65660.1| proteasome subunit [Spinacia oleracea]
          Length = 250

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 48/167 (28%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        +  K+ ++        AG    +      
Sbjct: 30  NAGSAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         AIG+    A S  +       + E+  + A+  
Sbjct: 149 MSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDVTREDAVKLALKA 195


>gi|12229904|sp|O82530|PSA4_PETHY RecName: Full=Proteasome subunit alpha type-4; AltName: Full=20S
           proteasome alpha subunit C; AltName: Full=20S proteasome
           subunit alpha-3
 gi|3608483|gb|AAC35982.1| proteasome alpha subunit [Petunia x hybrida]
          Length = 249

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        ++ K+ ++        AG    +      
Sbjct: 30  NAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITL-VI 121
              ++ +   +  Q      +L +     K                +    DK     + 
Sbjct: 90  AR-VQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         AIG+    A S  +       + EE  + A+ +
Sbjct: 149 MSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDDITREEAVQLALKV 195


>gi|289582959|ref|YP_003481425.1| proteasome endopeptidase complex, subunit alpha [Natrialba magadii
           ATCC 43099]
 gi|289532512|gb|ADD06863.1| proteasome endopeptidase complex, alpha subunit [Natrialba magadii
           ATCC 43099]
          Length = 251

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 58/169 (34%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR D  VV+A D +V     +  ++  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGTASIGVRTDDGVVLAVDKRVPS-PLLEDSSVEKIHKADDHIGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVIT 122
              ++ +    +         L +   +  + +      R     +++         +  
Sbjct: 93  FARRQSQVNQLRYGEPIGVETLTKEVTDHIQQYTQVGGARPFGVALIVGGVENGEPRLFE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSI 168
                   E   +A+G+  S   +        +   +   ++A  A++ 
Sbjct: 153 TDPSGTPYEWKALAVGADRSELQTYLEENYDEEADLDGGIQLALDALAS 201


>gi|126179622|ref|YP_001047587.1| proteasome subunit alpha [Methanoculleus marisnigri JR1]
 gi|166199287|sp|A3CW55|PSA_METMJ RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|125862416|gb|ABN57605.1| Proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
          Length = 240

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 19/192 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
             TT + ++    VV+  D +V+  + +   +  K+ ++     +A  G  G +      
Sbjct: 34  RGTTAVGIKCSEGVVLIVDKRVTS-RLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDR 92

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVIT 122
              +E ++ +       +   LAK                      +I         +  
Sbjct: 93  AR-VESQINRVSYNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVSDGEARLFE 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD--ICVYTN 177
                   E     IG+G    +               A  +  KA+  A +  + V + 
Sbjct: 152 TDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFSGAIRLGIKALHAATEGKLDV-SA 210

Query: 178 HNIVLETLKVGD 189
             I + +++ G+
Sbjct: 211 IEIGVVSIETGE 222


>gi|55377980|ref|YP_135830.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
 gi|59798452|sp|Q5V2X8|PSA1_HALMA RecName: Full=Proteasome subunit alpha 1; AltName: Full=20S
           proteasome alpha subunit 1; AltName: Full=Proteasome
           core protein PsmA 1
 gi|55230705|gb|AAV46124.1| proteasome alpha subunit [Haloarcula marismortui ATCC 43049]
          Length = 260

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 17/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR    VV+A D ++     + +++  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGTASIGVRTSDGVVLAVDKRI-RSPLMERSSVEKIHKADDHIGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIAD--KTITLVIT 122
              ++ +    +             +  Y+         R     ++I         +  
Sbjct: 93  FARRQAQVNQLRYGEPVGVETLTKEITDYIQQYTQVGGARPFGVALIIGGIVNGEPRLFE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                   E   +A+G+                   +E   +A  A++   D    +   
Sbjct: 153 TDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLALAALASVND-DELSPEG 211

Query: 180 IVLETLKVGDE 190
           I + T+ V  E
Sbjct: 212 IGVATVDVETE 222


>gi|224139550|ref|XP_002323165.1| predicted protein [Populus trichocarpa]
 gi|222867795|gb|EEF04926.1| predicted protein [Populus trichocarpa]
          Length = 250

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 51/167 (30%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        +  K+ ++       +AG    +      
Sbjct: 30  NAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVAVAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-IQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         AIG+    A S  +     + + EE  + A+ +
Sbjct: 149 MSDPSGNYAGWKAAAIGANNQAAQSMLKQDYRDEITREEAVQLALKV 195


>gi|7527355|dbj|BAA94269.1| proteasome subunit LMP7A [Xenopus amieti]
 gi|7527357|dbj|BAA94270.1| proteasome subunit LMP7A [Xenopus amieti]
          Length = 87

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 1/88 (1%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           ++A D + S G  +      KV  +    ++   +GS+AD       L K+   Y  +  
Sbjct: 1   IVAVDSRASAGSYISTIKFNKVIEINPY-LLGTMSGSAADCQYWERMLAKECRLYQLRNN 59

Query: 88  RSSVELAKDWRMDKYLRNLEAMILIADK 115
                 A    M   +       L    
Sbjct: 60  SRISVSAASKLMCNMMLQYRGTGLSVGS 87


>gi|297804794|ref|XP_002870281.1| hypothetical protein ARALYDRAFT_493416 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316117|gb|EFH46540.1| hypothetical protein ARALYDRAFT_493416 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 199

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 13/161 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  +G  ++A D        + K    K+  L    ++A  +G   D     E ++K
Sbjct: 4   VFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMVLDSHKLVAA-SGEPGDRVQFTEYVQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDVL 128
            +  Y  +        A            + K   ++  ++   DK     +        
Sbjct: 63  NVSLYQFRNGLPLTTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYIAT 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
             +    A G G  ++LS       +  S   A E+  K +
Sbjct: 123 LHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCI 163


>gi|226495745|ref|NP_001150029.1| LOC100283656 [Zea mays]
 gi|195636202|gb|ACG37569.1| proteasome subunit alpha type 3 [Zea mays]
          Length = 249

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 59/164 (35%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  V+    +  +N R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSN-RRIHSVHRHSGLA-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RTKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYI 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                +  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|145232021|ref|XP_001399476.1| proteasome subunit alpha type-5 [Aspergillus niger CBS 513.88]
 gi|134056386|emb|CAK47620.1| unnamed protein product [Aspergillus niger]
          Length = 246

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +L+E 
Sbjct: 34  GSTAIGVATSEGVILGVEKRVTS-SLLEASSVEKIVEIDQHIGCA-MSGLQADARSLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +L+A  D+  
Sbjct: 92  ARVECQNHAFHYAEPLRVESCTQAICDLALRFGETGDDEESVMSRPFGVALLLAGIDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLGEAETLVLKTLK 204


>gi|242019368|ref|XP_002430133.1| proteasome subunit alpha type 7-1, putative [Pediculus humanus
           corporis]
 gi|212515224|gb|EEB17395.1| proteasome subunit alpha type 7-1, putative [Pediculus humanus
           corporis]
          Length = 251

 Score = 56.1 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 31  KGSTAVGVRGQNCVVLGVEKK-SVAKLQEDRTVRKICLLDDH-VVMAFAGLTADARILIN 88

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R    L + +      R      L+A         + 
Sbjct: 89  RAQIECQSHKLTVEDPVTLEYITRYIATLKQKYTQSNGRRPFGISCLVAGFDYDGAPHLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                    T++ A ++A KA+
Sbjct: 149 QTEPSGIFYEWKANATGRSAKTVKEFLEKYYADEEVQTESGAVKLAIKAL 198


>gi|67617211|ref|XP_667536.1| proteasome subunit alpha type 7 (Proteasome component DD5)
           [Cryptosporidium hominis TU502]
 gi|54658677|gb|EAL37302.1| proteasome subunit alpha type 7 (Proteasome component DD5)
           [Cryptosporidium hominis]
          Length = 244

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 17/163 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR    VV+A + +          +A+K+  +     +A FAG  ADA  L+ ++  +
Sbjct: 34  IGVRGAECVVLAVERKAVAKLQ-DPRSAKKLLLVDDNTCLA-FAGLHADARVLVNKIRLE 91

Query: 79  LEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
            + +   +  +      +   A+  +   +   +    +        +     +      
Sbjct: 92  CQNFRLNIEDAPPVDYIARFTAQQQQKYTHRGGVRPFGVSTLIAGVHNDGSPGLYQTDPS 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
            +  E    A+G                  + EE   +A  A+
Sbjct: 152 GIALEWKAQAVGQNSKTVQEFLEKNYKHDMAKEETINLAISAL 194


>gi|225716302|gb|ACO13997.1| Proteasome subunit alpha type-5 [Esox lucius]
          Length = 241

 Score = 56.1 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 59/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDTHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESATQAVSNLALQFGEEDADPGAMSRPFGVALLFGGLDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + ++  + +++I
Sbjct: 152 QLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSTTLKDAIKSSLTI 201


>gi|195134694|ref|XP_002011772.1| GI11210 [Drosophila mojavensis]
 gi|193906895|gb|EDW05762.1| GI11210 [Drosophila mojavensis]
          Length = 249

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+G+       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEKK-SVGKLQEDRTVRKICVLDHH-VLMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +              +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T++   ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKTVREFFEKNYREEDVSTEHGTVKLAIRAL 197


>gi|146420386|ref|XP_001486149.1| hypothetical protein PGUG_01820 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 267

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 11/165 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTLL 72
           A T + +     VV+A + + +        +A K+  L    I  +AG    ++      
Sbjct: 31  AGTAIGILAKDGVVLACEKKFTSKLLDDDGSAEKLYALNDNMIAAVAGMTADASILVNHA 90

Query: 73  ERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVITG 123
               +K       +     L++   ++ + +     LR      L A   DK    + T 
Sbjct: 91  RYAAQKYLKTYNEQMPCEMLIKRVCDIKQGYTQHGGLRPFGVSFLYAGYDDKYQFQLFTS 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                       +IG+  S A +  +       S EE  + A+ +
Sbjct: 151 NPSGNYSGWRATSIGANNSAAQTLLKKDYKDDLSLEEACQLAVKV 195


>gi|308322205|gb|ADO28240.1| proteasome subunit alpha type-5 [Ictalurus furcatus]
          Length = 241

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 57/170 (33%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +   +  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPNSIEKIVEIDTHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +   + +++I
Sbjct: 152 QLYHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKGAIKSSLTI 201


>gi|299753757|ref|XP_001833467.2| proteasome subunit alpha type-7 [Coprinopsis cinerea okayama7#130]
 gi|298410449|gb|EAU88401.2| proteasome subunit alpha type-7 [Coprinopsis cinerea okayama7#130]
          Length = 265

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 15/163 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR   VVV+  + + S+ Q       RKV  L     +A FAG +AD   L++
Sbjct: 28  KGTCAVGVRGKDVVVLGVEKK-SVLQLQDPRTVRKVVMLDDHICLA-FAGLTADGRVLID 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +         +     +
Sbjct: 86  KARIECQSHRLTVEDPVTVEYITRYIAGIQQKYTQSGGVRPFGISTLIVGFDPNDNKPRL 145

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                  +       AIG                  S EE  +
Sbjct: 146 YQTEPSGIYSAWKANAIGRSSKTVREFLEKNHKDDLSREETIK 188


>gi|294930707|ref|XP_002779664.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
 gi|239889072|gb|EER11459.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
           50983]
          Length = 198

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 48/182 (26%), Gaps = 14/182 (7%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +     V+IA D  V     V              N +   AG  AD+   LE + + +
Sbjct: 7   GIAGKDWVIIAADSHV-EQSIVKFKTTEDKIYEMDNNKLVAAAGPQADSNQFLEFISRNV 65

Query: 80  EQYPNQLLRSSV----------ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           E Y                   ELA   R   Y  N+             +         
Sbjct: 66  ELYALVNGVQLTTHALASFTRNELADALRKGPYQVNMLIGGYDDKDGSASLYYMDYLASC 125

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLETLK 186
            +    A G    + L     L     + E   +  ++ +       +    N +++ + 
Sbjct: 126 QKITRGAHGYAAYFVLGLLDKLYKKDMTQEDGLDAIKQCIKECKKRFIIDKSNFIIKAVD 185

Query: 187 VG 188
             
Sbjct: 186 KD 187


>gi|209880066|ref|XP_002141473.1| proteasome subunit beta type 2 [Cryptosporidium muris RN66]
 gi|209557079|gb|EEA07124.1| proteasome subunit beta type 2, putative [Cryptosporidium muris
           RN66]
          Length = 201

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 48/159 (30%), Gaps = 14/159 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V+IA D     G + +K +  K+  +    +IA  AG   D     E ++  
Sbjct: 5   IGIKGPDFVIIAADSTSISGISRIKHDEDKILSIDGNKLIAT-AGDIGDRNQFGEFIKCN 63

Query: 79  LEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           +  Y  +   +    A          +            +    D+   L+         
Sbjct: 64  INLYSLRNNVNLGTSATASFTRLELAELLRSNPHNVRMLIGGYNDREGPLLYWIDEIASM 123

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 A G GG            +  + +E    A++I
Sbjct: 124 ASVNKAAHGYGGLLVTGILDRFYKSNLTQDE----ALNI 158


>gi|156045147|ref|XP_001589129.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154694157|gb|EDN93895.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 242

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V   G VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 31  GSTAIGVATGGGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 89  ARVESQNHSFHYNEPLRVESCTQAICDLALRFGEGADGEESIMSRPFGVALLIAGYDEDG 148

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 149 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHKSLTIEEAETLVLKTLK 201


>gi|170091952|ref|XP_001877198.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164648691|gb|EDR12934.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 247

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + ++    +V+A +  V     V  AN R+++ + +   +A  AG  AD   L  
Sbjct: 33  NSGTAIGLKVKDGIVLAVEKLVHSKLLVPDAN-RRIQTIDRHIGLAT-AGLLADGRHLSN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----------ILIADKTITLVIT 122
           R   +   Y +    +    A   R+  Y++                +   DK    +  
Sbjct: 91  RARDEASNYRDTYNSAPPLKAVADRLGLYVQAYTLYSSVRPFGISTILGAVDKDGPSLFV 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       A+G G   A +    L  T+ S  E   +A  I
Sbjct: 151 VEPSGVFFGYNGAAVGKGRQLAKTELEKLNLTELSTREAVMEAARI 196


>gi|70944654|ref|XP_742236.1| beta3 proteasome subunit [Plasmodium chabaudi chabaudi]
 gi|56521097|emb|CAH75996.1| beta3 proteasome subunit, putative [Plasmodium chabaudi chabaudi]
          Length = 204

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 56/206 (27%), Gaps = 38/206 (18%)

Query: 21  VRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           +     V IA D ++ S   T +  N  K+ ++     + G +G + D  +L E L  ++
Sbjct: 1   MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYV-GLSGLATDIQSLYELLRYRV 59

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------------- 120
             Y  +             +   L +        +  +                      
Sbjct: 60  NLYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPY 119

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADIC- 173
                 +G   E  +  +  G           ++           E   + +  A D   
Sbjct: 120 LNAYDLIGAKCETND-FVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDC 178

Query: 174 -------VY--TNHNIVLETLKVGDE 190
                  VY  T   I+ + LK   +
Sbjct: 179 LSGWGAEVYVLTPDKIIKKKLKARMD 204


>gi|296419027|ref|XP_002839126.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635121|emb|CAZ83317.1| unnamed protein product [Tuber melanosporum]
          Length = 249

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 58/190 (30%), Gaps = 14/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L V     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGVLAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  +             QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQNYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDSQREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHN 179
                        ++G+  + A S  +           A  IA K +S   D    +N  
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACAIAVKVLSKTMDSTTLSNEK 209

Query: 180 IVLETLKVGD 189
           I   T+   +
Sbjct: 210 IEFATVGKTE 219


>gi|156359803|ref|XP_001624954.1| predicted protein [Nematostella vectensis]
 gi|156211762|gb|EDO32854.1| predicted protein [Nematostella vectensis]
          Length = 197

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 14/160 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++ DG V++A D   S    V   +          N++    G S D     E +EK 
Sbjct: 5   IGIQGDGFVLVAADC-ASGRSIVRMKDDYDKMTKLSDNLLMLVTGESGDTAQFAEYIEKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILI------ADKTITLVITGMGDVL 128
           ++ Y  +        A      +    YLR+    ++       +      +        
Sbjct: 64  VQLYKMRNGYDLTPHAAANFTRRTLAEYLRSRTPYMVNLLLAGHSSNEGPALYHMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKA 165
             +    A G G  + LS          +   A E+  + 
Sbjct: 124 LSKVPFAAHGYGSFFVLSIMDRYFKPNMTKDQALELLERC 163


>gi|313231827|emb|CBY08939.1| unnamed protein product [Oikopleura dioica]
 gi|313241521|emb|CBY33769.1| unnamed protein product [Oikopleura dioica]
          Length = 239

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 19/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +IL +  +G V++AGD   + G      +  ++ ++    ++  + G  AD   + E 
Sbjct: 25  GGSILGIMFEGGVLLAGDRLGAYGGLHRFRDIDRIIKVNDN-VLITYTGDVADFQYIEEI 83

Query: 75  LEKKLEQYPNQL---LRSSVELAKDWRMDKYLRNLEAMILIA---------DKTITLVIT 122
           LE +  +   +         E         Y R  +   L                 +  
Sbjct: 84  LEDEQRENDMRNDGYELGPSEYFNLMGRIMYNRRSKGNPLWNRIIVAGYDKAADKPFMGQ 143

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSI 168
                   E+ ++  G GG          +       T+  A +I  +A+ +
Sbjct: 144 IDSKGTVFESHLIGTGFGGFLVHPLMERELEKIDGRPTKEQATQILERALKV 195


>gi|268566775|ref|XP_002639810.1| C. briggsae CBR-PAS-5 protein [Caenorhabditis briggsae]
          Length = 249

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 57/169 (33%), Gaps = 16/169 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V++A + + +    V      K+ ++ +      FAG  AD+ TL+ER
Sbjct: 34  GSTSIGIKTSEGVLLAAEKRSTSKLMV-NDAIEKISKVDQHIGNVTFAGLIADSRTLVER 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK-------------YLRNLEAMILIA--DKTITL 119
            + + + +     R          +                 R     +L A  D+    
Sbjct: 93  AQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEGAK 152

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           +          +    +IG+    A    +       + +E  + A++I
Sbjct: 153 LFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAI 201


>gi|195134534|ref|XP_002011692.1| GI10953 [Drosophila mojavensis]
 gi|193906815|gb|EDW05682.1| GI10953 [Drosophila mojavensis]
          Length = 448

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 45/145 (31%), Gaps = 10/145 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           A++++ V+ D  V+IA D  V  G      +  +V R+ +  I+ G    +     +   
Sbjct: 237 ASSVVGVKFDDGVMIAADTLVVYGNACRYQDVDRVMRINRNTILGGGRDFADVQAVVRTI 296

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMILIAD--------KTITLVITGM 124
             K +E +  Q        +    M +  Y R  +   L  D             +    
Sbjct: 297 SHKIIEDHCFQDGHHLSPKSLHSWMTRLLYSRRNKRDKLDVDLVIGGMTPNNKPYLGYVD 356

Query: 125 GDVLEPENGVMAIGSGGSYALSAAR 149
                  + V+  G          R
Sbjct: 357 SRGTALTSDVVTTGFSRVLVEPLIR 381


>gi|66358378|ref|XP_626367.1| proteasome regulatory subunit, NTN hydrolase fold [Cryptosporidium
           parvum Iowa II]
 gi|46227998|gb|EAK88918.1| putative proteasome regulatory subunit, NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
          Length = 256

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 53/163 (32%), Gaps = 17/163 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR    VV+A + +          +A+K+  +     +A FAG  ADA  L+ ++  +
Sbjct: 46  IGVRGAECVVLAVERKAVAKLQ-DPRSAKKLLLVDDNTCLA-FAGLHADARVLVNKIRLE 103

Query: 79  LEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
            + +   +  +      +   A+  +   +   +    +        +     +      
Sbjct: 104 CQNFRLNIEDAPPVDYIARFTAQQQQKYTHRGGVRPFGVSTLIAGVHNDGSPGLYQTDPS 163

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
            +  E    A+G                  + EE   +A  A+
Sbjct: 164 GIALEWKAQAVGQNSKTVQEFLEKNYKHDMAKEETINLAISAL 206


>gi|146165189|ref|XP_001014581.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|146145493|gb|EAR94553.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 249

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 55/201 (27%), Gaps = 36/201 (17%)

Query: 17  TILTVRKDGVVVIAG----DGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           T + ++  G V++A     D        ++  N +         I    AG   DA TL+
Sbjct: 36  TSIGIKVKGGVILAAERKFDSLQESRLMILNHNIKIQEIDTH--ICCVPAGIIPDARTLI 93

Query: 73  ERLEKKLEQYPNQLLRSSVELAK----------------DWRMDKYLRNLEAMILIA--D 114
           +    + + +           +                   +     R     +LIA  D
Sbjct: 94  DYARVESQNHRFTYNEPMSVRSLTQTVSDLALNFGEGDPSLKRKPMPRPFGVALLIAGVD 153

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIA----RKAMS 167
           +T   +          E     IG G                S   AE +A    ++ M 
Sbjct: 154 ETGPRLFKTDPSGSMMEYQATCIGCGQEGIQPTLVEKYDENMSIREAEVLALSCLKETME 213

Query: 168 IAADICVYTNHNIVLETLKVG 188
             A        N+ L  + + 
Sbjct: 214 QTASRD-----NLELAVIPIE 229


>gi|190345778|gb|EDK37722.2| hypothetical protein PGUG_01820 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 267

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 11/165 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTLL 72
           A T + +     VV+A + + +        +A K+  L    I  +AG    ++      
Sbjct: 31  AGTAIGILAKDGVVLACEKKFTSKLLDDDGSAEKLYALNDNMIAAVAGMTADASILVNHA 90

Query: 73  ERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVITG 123
               +K       +     L++   ++ + +     LR      L A   DK    + T 
Sbjct: 91  RYAAQKYLKTYNEQMPCEMLIKRVCDIKQGYTQHGGLRPFGVSFLYAGYDDKYQFQLFTS 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                       +IG+  S A +  +       S EE  + A+ +
Sbjct: 151 NPSGNYSGWRATSIGANNSAAQTLLKKDYKDDLSLEEACQLAVKV 195


>gi|14324522|dbj|BAB59449.1| proteasome alpha subunit [Thermoplasma volcanium GSS1]
          Length = 242

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 54/168 (32%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L ++    V++  D ++   + + + +  K++ +            +     +  
Sbjct: 42  KGSTALGLKFSNGVLLISDKKI-RSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDF 100

Query: 74  -RLEKKLEQ-------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+  + E+           L++   +  + +     +R     ++ A  D+    +   
Sbjct: 101 ARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDC 160

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSI 168
                  E    AIGSG    +S          S +E      KA+  
Sbjct: 161 DPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKA 208


>gi|327310393|ref|YP_004337290.1| proteasome subunit alpha [Thermoproteus uzoniensis 768-20]
 gi|326946872|gb|AEA11978.1| proteasome subunit alpha [Thermoproteus uzoniensis 768-20]
          Length = 239

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 15/174 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
                + V+    VV+A + +  + Q    ++  K+  +     I+  G    +      
Sbjct: 34  RGWPTVGVKCSSGVVLAAEKR-KISQLFDPSSLEKIYIVDDHVAISPSGLLADARVLVDY 92

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
              +        ++      L +    L + +      R     +L+A  D+    +   
Sbjct: 93  ARSVALAHRFLYDEPIDVEVLTKDICNLKQQYTQFGGARPFGVALLVAGIDRQGPKLFQT 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD-IC 173
               +       AIG+  +  +       S         E+A +A+S A + I 
Sbjct: 153 DPGGVYLGYYATAIGAESTAIVEFLEKNYSHDMDVPQCIELALRALSTAMESID 206


>gi|326428761|gb|EGD74331.1| proteasome subunit beta type-1 [Salpingoeca sp. ATCC 50818]
          Length = 180

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 41/164 (25%), Gaps = 30/164 (18%)

Query: 55  GNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
              +   AG   D  TL++R+  +++ Y  Q  +     A    +   L           
Sbjct: 5   DKTVLASAGFHGDVLTLVKRIGVRMQNYEYQHRKPMSTPACAQMLATMLYGKRFFPYYTY 64

Query: 115 KTITLV--------ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------------- 153
             +  +         +             A G+  +                        
Sbjct: 65  NILAGLDADGKGCVFSYDPVGSYEREHYRAAGTASALLQPFLDNQARALARIPDYIGRKN 124

Query: 154 ---------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                    ++  A  I +   + AA+  +YT   + +  +   
Sbjct: 125 QQGVVFEPISKERAMTIIKDVFTSAAERDIYTGDAVDIRIVTKD 168


>gi|66359220|ref|XP_626788.1| proteasome subunit alpha type 3, NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
 gi|46228188|gb|EAK89087.1| proteasome subunit alpha type 3, NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
          Length = 251

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 51/169 (30%), Gaps = 18/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + +  +  +V A D  V+    V   N R         I    AG   D+  ++ 
Sbjct: 33  NSGTTIAMIYNSGIVFAVDKYVASKMMVAGTNRRVFAI--DNQIGCCVAGFVTDSNKIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTIT-LVI 121
               +   Y               R+  Y+                ++   D+     + 
Sbjct: 91  IARSESLNYQKIYGNPIPIRVLAERIAMYMHNFTLYGSVRPFGCSILLGGLDQDRGVELY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
                    +   MA+G G  +A +    LM    S E+    A+  AA
Sbjct: 151 CIHPSGSCYKYCAMAVGKGRQFARTDLEKLMEKNLSEED----ALYEAA 195


>gi|194755311|ref|XP_001959935.1| GF13117 [Drosophila ananassae]
 gi|190621233|gb|EDV36757.1| GF13117 [Drosophila ananassae]
          Length = 243

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 19/160 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    V      K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTPEGVVLAVEKRITSPLMVPS-TVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK---------------YLRNLEAMILIADKT--I 117
              + + +           +    +                   R     IL A      
Sbjct: 92  ARVECQNHWFVYDERMSIESCAQAVSTLAIQFGDSGESDGAAMSRPFGVAILFAGIEDGQ 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
             +           +   AIGSG   A    +    +Q +
Sbjct: 152 PQLWHMDPSGTFLRDSTKAIGSGSEGAQQTLKEEYHSQMT 191


>gi|126649191|ref|XP_001388268.1| proteasome subunit alpha type 5 [Cryptosporidium parvum Iowa II]
 gi|126117190|gb|EAZ51290.1| proteasome subunit alpha type 5 [Cryptosporidium parvum Iowa II]
          Length = 255

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 74/198 (37%), Gaps = 27/198 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V++A + ++S    +   N  K+  + +  +    +G  ADA T+++ 
Sbjct: 34  GSTAVGIKTKEGVILASEKRISS-PLLEPRNLEKIMIIDRH-VGCCMSGLVADAKTMIDH 91

Query: 75  LEKKLEQYPNQ---------LLRSSVELAKDWRMDK-------YLRNLEAMILIADKTIT 118
              + + Y            +++S  +LA D+   K         R     +LIA     
Sbjct: 92  ARVESQNYFFTYNENIPTQSVVQSISDLALDFSDIKEKGKKKSMSRPFGVAMLIAGADSD 151

Query: 119 L---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +          +    AIG+    A +      ++  S   AE++A   +    + 
Sbjct: 152 GSSSLWMTDPSGTYTQYSAAAIGTAQEGAEAILLENYNSNMSLKEAEDLALIVLRQVMEE 211

Query: 173 CVYTNHNIVLETLKVGDE 190
            +   +++ +E   V ++
Sbjct: 212 KI---NSVNVEVAAVKEK 226


>gi|310791603|gb|EFQ27130.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 270

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 48/168 (28%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   VVV+  + + S  +           +L   ++   FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGSDVVVLGCEKR-SAMKLQDTRITPSKIQLLDTHVCLAFAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   +   +        +A   +       +    +        +   +  +
Sbjct: 89  KARLEAQSHRLTVEDPASIEYMTKYVAGVQQRYTQSGGVRPFGISTLIVGFDSGSKVPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  +       AIG                    E   R A+  
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNYKEDMDREATIRLAIKS 196


>gi|82704967|ref|XP_726772.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482323|gb|EAA18337.1| 7006-8626 [Plasmodium yoelii yoelii]
          Length = 204

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 56/206 (27%), Gaps = 38/206 (18%)

Query: 21  VRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           +     V IA D ++ S   T +  N  K+ ++     + G +G + D  +L E L  ++
Sbjct: 1   MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYV-GLSGLATDIQSLYELLRYRV 59

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------------- 120
             Y  +             +   L +        +  +                      
Sbjct: 60  NLYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKINVYEPY 119

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADIC- 173
                 +G   E  +  +  G           ++           E   + +  A D   
Sbjct: 120 LNAYDLIGAKCETND-FVVNGVSNEQLYGMCESMYIKDQDENGLFETVSQCLLSALDRDC 178

Query: 174 -------VY--TNHNIVLETLKVGDE 190
                  VY  T   I+ + LK   +
Sbjct: 179 LSGWGAEVYVLTPDKIIKKKLKARMD 204


>gi|255637334|gb|ACU18997.1| unknown [Glycine max]
          Length = 250

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A T + +     VV+ G+ +V+        +  K+ ++        AG    +      
Sbjct: 30  NAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   Y  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         AIG+    A S  +       + EE  + A+ +
Sbjct: 149 MSDPSGNYGGWKAGAIGANNQAAQSILKQDYKDGITREEAVQLALKV 195


>gi|293331913|ref|NP_001169594.1| hypothetical protein LOC100383475 [Zea mays]
 gi|195657431|gb|ACG48183.1| proteasome subunit alpha type 3 [Zea mays]
 gi|224030269|gb|ACN34210.1| unknown [Zea mays]
          Length = 249

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 59/164 (35%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  V+    +  +N R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSN-RRIHSVHRHSGLA-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RTKSEAASYEKVYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                +  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|195393548|ref|XP_002055416.1| Pros28.1B [Drosophila virilis]
 gi|194149926|gb|EDW65617.1| Pros28.1B [Drosophila virilis]
          Length = 251

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 57/178 (32%), Gaps = 20/178 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R    VV+  + +  +    ++  +RK++++ +      FAG +ADA  L+ 
Sbjct: 29  KGSTVVGLRTKECVVLGVEKRA-IDSLQIERTSRKIKKIDQHMA-MTFAGLTADARVLVS 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKT---ITLVI 121
           R + + + +     R +        + +           R      LI          + 
Sbjct: 87  RAQVEAQSHRLNFDRPASVEYITRYLARLKQTYTQSVARRPFGVSCLIGGFDEDGRPRLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARAL-----MSTQ-NSAEEIARKAMSIAADIC 173
                 +  E      G  G                +    SA +   +A+  A  + 
Sbjct: 147 QTDPSGIYYEWSANTTGRLGQTVNEYLEKNTAAISRAPDAASAMKHVVRALFTATSLD 204


>gi|76160982|gb|ABA40454.1| proteasome alpha subunit-like protein [Solanum tuberosum]
          Length = 256

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 58/190 (30%), Gaps = 19/190 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        ++ K+ ++        AG    +      
Sbjct: 30  NAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH--N 179
                         AIG+    A S  +       + EE  + A+ +       T    +
Sbjct: 149 MSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDITREEAVQLALKVLGK----TMDSTS 204

Query: 180 IVLETLKVGD 189
           +  E L++ +
Sbjct: 205 LTSEKLELAE 214


>gi|225437070|ref|XP_002279370.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147843860|emb|CAN79443.1| hypothetical protein VITISV_006154 [Vitis vinifera]
          Length = 205

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  DG  ++  D        V K+N  K+  L    ++ G +G   D     E ++K
Sbjct: 4   VFGLVGDGFALVVADSSAVHSILVHKSNEDKIMVLDSHKLL-GASGEGGDRAQFTEYIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTI-TLVITGMGDVL 128
            +  Y  +        A            + K    +  ++   DK I   +        
Sbjct: 63  NVALYQFRNGIPLTTAAAANFTRGELATALRKNPYAVNILLAGYDKDIGPSLYYIDYIAS 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +    A G G  ++L+       +  + EE  
Sbjct: 123 LHKIEKGAFGYGSYFSLAMMDRHYHSGMTVEEAV 156


>gi|84999618|ref|XP_954530.1| proteasome subunit beta type 2 [Theileria annulata]
 gi|65305528|emb|CAI73853.1| proteasome subunit beta type 2, putative [Theileria annulata]
          Length = 212

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 41/154 (26%), Gaps = 8/154 (5%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ +     V +A D         +K +          + +   AG S D     E + 
Sbjct: 3   TLIGICGRDFVAVATDTYEKSSIVTLKNDDESKIMQIDDSKLLLLAGPSGDRMQFGEYIR 62

Query: 77  KKLEQYPNQLLRSSVELAKDW--------RMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           K +  +  +   S    +            + K    ++ ++   D     +        
Sbjct: 63  KSVHYHRYKTSFSMTTKSMAHFVRQQLAEYLRKSPYQVDLLVAGFDNNGPKLYWIDYLAS 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             E      G GG +             + EE  
Sbjct: 123 STEVDRAVHGYGGHFLRGLLDKEYHENLTVEEAV 156


>gi|154294634|ref|XP_001547757.1| 20S proteasome alpha subunit E [Botryotinia fuckeliana B05.10]
 gi|150844666|gb|EDN19859.1| 20S proteasome alpha subunit E [Botryotinia fuckeliana B05.10]
          Length = 245

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V   G VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATGGGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVESQNHSFHYNEPLRVESCTQAICDLALRFGEGADGEESIMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHKSLTIEEAETLVLKTLK 204


>gi|302895295|ref|XP_003046528.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256727455|gb|EEU40815.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 245

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVILGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD---------------KYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQSHSFNYNEPLRVESCTQAICDLALRFGEGADGEETIMSRPFGVALLIAGFDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A +  +           AE +  K + 
Sbjct: 152 PQLFHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTLTDAETLVLKTLK 204


>gi|224086367|ref|XP_002307867.1| predicted protein [Populus trichocarpa]
 gi|118484506|gb|ABK94128.1| unknown [Populus trichocarpa]
 gi|222853843|gb|EEE91390.1| predicted protein [Populus trichocarpa]
          Length = 250

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 50/167 (29%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        +  K+ ++        AG    +      
Sbjct: 30  NAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-IQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         AIG+    A S  +     + + EE  + A+ +
Sbjct: 149 MSDPSGNYSGWKAGAIGANNQAAQSMLKQDYKDEITREEAVQLALKV 195


>gi|256076798|ref|XP_002574696.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
           mansoni]
 gi|238659909|emb|CAZ30929.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
           mansoni]
          Length = 237

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 18/167 (10%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I   +    VV+A + +V+    ++ ++  K+  + K    A  +G  ADA TL+ER   
Sbjct: 28  IEATKTSEGVVMAVEKRVNS-TLIIPSSIEKIFEVDKHIACA-VSGLVADARTLIERART 85

Query: 78  KLEQYP---------NQLLRSSVELAKDWRMDKY-------LRNLEAMILIADKTITLVI 121
           +   +            + ++   LA  +  D            +  +    D+    + 
Sbjct: 86  EAAHHWFVYNEKMTIEDVTKAVSNLALAFGDDDMESGAMSRPFGVALLFAGVDERGPQLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         AIGSG   A  A + +     +  E  + A+SI
Sbjct: 146 HMDPSGTYIRYEAKAIGSGSEGAQQALQEIYHKNMTLHEGCKHALSI 192


>gi|255731768|ref|XP_002550808.1| proteasome component C1 [Candida tropicalis MYA-3404]
 gi|240131817|gb|EER31376.1| proteasome component C1 [Candida tropicalis MYA-3404]
          Length = 259

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 17/170 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    VV+A +  +     V   N R   +    ++   ++G   D    + 
Sbjct: 33  NGGTSIGIKCKDGVVLAVEKIIQSKLLVPGKNKRI--QTVDRHVGVVYSGLLPDGRHFVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-----------AMILIADKTITLVIT 122
           R   + + Y +             RM  Y++N             +++   D     +  
Sbjct: 91  RCRDEAQSYKSIFKTPIPVPNLMDRMGIYVQNYTCYNSVRPFGVVSIVAGVDDNGPHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                        A G G   A S    L   + +  E    A+  AA I
Sbjct: 151 IEPSGTCWGYSGAATGKGRQSAKSELEKLNYEELTCAE----AIKHAARI 196


>gi|302413898|ref|XP_003004781.1| proteasome component PUP2 [Verticillium albo-atrum VaMs.102]
 gi|261355850|gb|EEY18278.1| proteasome component PUP2 [Verticillium albo-atrum VaMs.102]
          Length = 243

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 32  GSTAIGVATADGVILGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 89

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD---------------KYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 90  ARVESQSHTFNYAEPLRVESATQAICDLALRFGEGADGEETIMSRPFGVALLIAGYDEDG 149

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A +  +           AE +  K + 
Sbjct: 150 PQLYHAEPSATFYRYDAKAIGSGSEGAQAELQNEYHKSLTIEDAETLVLKTLK 202


>gi|323455458|gb|EGB11326.1| hypothetical protein AURANDRAFT_52492 [Aureococcus anophagefferens]
          Length = 229

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 48/165 (29%), Gaps = 16/165 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              +  H  ++L +     V +  D ++  G  ++   A +V   G   ++A   G   D
Sbjct: 18  SDPLSYHGGSVLAMAGKKSVALVLDKRLGQGNALVGDEACRVLECGPRAVLA-LRGLQGD 76

Query: 68  AFTLLERLEKKLEQYPNQLLRSSV--ELAKDWRMDKYLRNLE-------------AMILI 112
             TLLE ++ KL     +   S+     A    +   L                    L 
Sbjct: 77  VQTLLEDVDAKLRLRRLEEGPSAASEPKAVSALVSVMLYGGRLSGGAPGYAVEPVICGLG 136

Query: 113 ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
           AD    L            +  +  G+  S    A  A       
Sbjct: 137 ADGAPYLCAQDGLGARMVSDTFVVAGTAASSLYGACEATFEADLE 181


>gi|225425168|ref|XP_002264176.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 132

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 42/132 (31%), Gaps = 1/132 (0%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           M            +  + + +      VI    ++S+G  ++  +  K+ +L    ++A 
Sbjct: 1   MTKQQANWSLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMA- 59

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
            +G  AD   L + L  +   Y +Q  +     A    +   L         +   +  +
Sbjct: 60  SSGFQADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGL 119

Query: 121 ITGMGDVLEPEN 132
                  + P  
Sbjct: 120 DNEGKGWVLPRC 131


>gi|225679898|gb|EEH18182.1| proteasome subunit alpha type-5 [Paracoccidioides brasiliensis
           Pb03]
          Length = 272

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 61  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 118

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 119 ARVESQNHAFNYSEPLRVESCTQAICDLALRFGEGADGEESVMSRPFGVALLIAGYDEDG 178

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       S   AE +  K + 
Sbjct: 179 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQTEYHRSLSLAEAETLVLKTLK 231


>gi|85091201|ref|XP_958786.1| proteasome component Y13 [Neurospora crassa OR74A]
 gi|28920171|gb|EAA29550.1| proteasome component Y13 [Neurospora crassa OR74A]
          Length = 251

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPQRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        + G+  + A S  +       + +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSAGANNASAQSLLKQDYKEDCTLKEACAMAVKV 195


>gi|328874968|gb|EGG23333.1| proteasome subunit alpha type 4 [Dictyostelium fasciculatum]
          Length = 250

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 52/190 (27%), Gaps = 23/190 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKAN-ARKVRRLGKGNII--AGFAGSSADAFT 70
           HA   + +     +V+A + +            A K+ ++    +   AG    +     
Sbjct: 30  HAGATVGILASDGIVLAAEKKTIAKLLDSSKTQAEKMFKIDDHVVCAVAGITSDANILIN 89

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKD-------WRMDKYLRNLEAMILIADKTITL---V 120
              RL  +   Y  Q      +L          +     LR      L A         +
Sbjct: 90  -HARLSSQRYFYTYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDSQFGFQL 148

Query: 121 ITGMGDVLEPENGVMAIGS-GGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYT 176
                          +IG      A S  R+          A E+A K ++   D     
Sbjct: 149 YQSDPSGNFAGWKATSIGGENSQVAQSVLRSSYKPDMQLKEALELALKVLTKTMDR---- 204

Query: 177 NHNIVLETLK 186
             NI  E L+
Sbjct: 205 -SNINSEKLE 213


>gi|302500718|ref|XP_003012352.1| hypothetical protein ARB_01311 [Arthroderma benhamiae CBS 112371]
 gi|291175910|gb|EFE31712.1| hypothetical protein ARB_01311 [Arthroderma benhamiae CBS 112371]
          Length = 329

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + +V+    +  ++  K+  + +    A  G    +       
Sbjct: 118 GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDQHIGCAMSGLQADARSMVEHA 176

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDK------------YLRNLEAMILIA--DKTIT 118
               +    + ++ LR          +                R     +LIA  D+   
Sbjct: 177 RVETQNHRFHYSEPLRVESCTQAICDLALRFGEGADGEESIMSRPFGVALLIAGYDEDGP 236

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
            +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 237 QLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 288


>gi|255716994|ref|XP_002554778.1| KLTH0F13574p [Lachancea thermotolerans]
 gi|238936161|emb|CAR24341.1| KLTH0F13574p [Lachancea thermotolerans]
          Length = 254

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 20/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + ++    VVI  + + +L     +    K+ ++    +++ FAG +AD+  L+E
Sbjct: 29  RGTCAVGIKGKDCVVIGCERRSTLKLQDPRITPSKIAKIDSHVVLS-FAGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   L               + + +     +R      LIA          +
Sbjct: 88  KARVEAQSHKLTLEDPVSVDYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDPRDTTPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALM------STQNSAEEIARKAM 166
                  +       AIG                    +T+    ++  KA+
Sbjct: 148 YQTEPSGVYSAWSAQAIGRNSKTVREFLEKNYARDAPPATEQECVKLTVKAL 199


>gi|289618688|emb|CBI54754.1| unnamed protein product [Sordaria macrospora]
          Length = 251

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  +K            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQKYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPQRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        + G+  + A S  +       + +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSAGANNASAQSLLKQDYKEDCNLKEACAMAVKV 195


>gi|125807908|ref|XP_001360561.1| GA10654 [Drosophila pseudoobscura pseudoobscura]
 gi|195150345|ref|XP_002016115.1| GL11421 [Drosophila persimilis]
 gi|54635733|gb|EAL25136.1| GA10654 [Drosophila pseudoobscura pseudoobscura]
 gi|194109962|gb|EDW32005.1| GL11421 [Drosophila persimilis]
          Length = 244

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 28/189 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +  +  VV+A + +++    V   +  K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTNEGVVLAVEKRITSPLMVPS-SVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKTI- 117
              + + +           +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGVENK 151

Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
              +           +   AIGSG   A    +   + + S        ++ A D+C+ T
Sbjct: 152 KPQLWHMDPSGTFVRHSAKAIGSGSEGAQQNLQDTFTAEMS--------LNEAIDLCLNT 203

Query: 177 NHNIVLETL 185
              ++ E L
Sbjct: 204 LKQVMEEKL 212


>gi|323449973|gb|EGB05857.1| hypothetical protein AURANDRAFT_60228 [Aureococcus anophagefferens]
          Length = 256

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 44/166 (26%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A T + +     VV+AG+ Q          ++ K+ +L      ++AG    +      
Sbjct: 30  NAGTAVGLLATDGVVMAGEKQKVTKLLEPPKSSEKIYKLDDHVACVVAGLTADANILINE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QL+       + +      R      L A         +  
Sbjct: 90  ARVASQRYTYQYGEAIPVEQLVEKVCNHKQLYTQYGGQRPFGVKFLFAGYDDHFGYQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         +G   +   S  +        A    + ++ +
Sbjct: 150 SDPSGNYSGWKATCMGQNANSGQSLLKNEYDETMDAAACVKLSLKV 195


>gi|323352352|gb|EGA84887.1| Pre6p [Saccharomyces cerevisiae VL3]
          Length = 210

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 50/166 (30%), Gaps = 17/166 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    KV ++    +++ F+G +AD+  L+E
Sbjct: 29  RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLS-FSGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
           +   + + +   L               + + +     +R      LIA          +
Sbjct: 88  KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIAR 163
                  +        IG                     + EE  +
Sbjct: 148 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVK 193


>gi|323307097|gb|EGA60380.1| Pre6p [Saccharomyces cerevisiae FostersO]
          Length = 252

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 50/166 (30%), Gaps = 17/166 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    KV ++    +++ F+G +AD+  L+E
Sbjct: 29  RGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLS-FSGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
           +   + + +   L               + + +     +R      LIA          +
Sbjct: 88  KARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIAR 163
                  +        IG                     + EE  +
Sbjct: 148 YQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVK 193


>gi|289724871|gb|ADD18371.1| 20S proteasome regulatory subunit beta type PSMB2/PRE1 [Glossina
           morsitans morsitans]
          Length = 195

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 11/152 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           ++ +  V++A D + +     +K +  K+ +     ++A   G S D     E +++ ++
Sbjct: 1   IKMNDFVLLAADMRCAHSILTIKHDELKMFKF-SKRVLAAVCGESGDTSQFSEFIQQNMQ 59

Query: 81  QYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIADKT---ITLVITGMGDVLEP 130
            Y  +        A        +             +LIA         +          
Sbjct: 60  LYEIRNGYELTPSAAANFTRNNMAESLRSRSPYFVNLLIAGFDLQTGPELYYLDYLASLI 119

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
           +      G G   ALS    +     +  E  
Sbjct: 120 KVPFAVHGYGALVALSILDRMHRPDMTVNEAV 151


>gi|217075150|gb|ACJ85935.1| unknown [Medicago truncatula]
          Length = 229

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 46/161 (28%), Gaps = 13/161 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A T + +     VV+ G+ +V+        +  K+ ++    +   AG    +      
Sbjct: 30  NAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVVCAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-IQAQRYSFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
                         AIG+    A S  +       + EE  
Sbjct: 149 MSDPSGNYGGWKAGAIGANNQAAQSILKQDYKDDITREEAV 189


>gi|169869498|ref|XP_001841312.1| proteasome component Pre1 [Coprinopsis cinerea okayama7#130]
 gi|116497590|gb|EAU80485.1| proteasome component Pre1 [Coprinopsis cinerea okayama7#130]
          Length = 194

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 58/186 (31%), Gaps = 15/186 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T   +   G  ++A D   +     MK +  K++ LG   ++  ++G   D     E  E
Sbjct: 3   TSFAITGKGYTIVAADTTAARSIVKMKIDEDKIKVLGPH-LLMAYSGEPGDTVQFAEYAE 61

Query: 77  KKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK--TITLVITGMG 125
           + +  Y  +   +    A               +   ++  ++   D       +     
Sbjct: 62  RNIRLYQIRNTYALRPSAAASWIRRALADSLRSRNPYSVNLLLGGYDTATHDPHLYWIDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVL 182
                     A G G  +ALS      + + S E   E  ++ +   A   V +     +
Sbjct: 122 LGTITRVPFAAHGYGAYFALSLLDRYHNPEASLEEGLETLKRCIDEVAKRLVVSPGKYKV 181

Query: 183 ETLKVG 188
           + +   
Sbjct: 182 KVVDKD 187


>gi|241958592|ref|XP_002422015.1| proteasome component, putative [Candida dubliniensis CD36]
 gi|223645360|emb|CAX40016.1| proteasome component, putative [Candida dubliniensis CD36]
          Length = 250

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 59/187 (31%), Gaps = 16/187 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+    VV+  + + +L     +    K+ ++    ++A FAG +ADA  L++
Sbjct: 29  RGTCAVGVKGKNTVVLGCEKRTALKLQDPRITPSKICKVDHHILLA-FAGLNADARILVD 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   L            +A   +       +    +            +  +
Sbjct: 88  KARVEAQSHKLTLEDPVSVEYLTKYVAGVQQKYTQSGGVRPFGIATLIAGFDVRDDVPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-N 179
                  +       AIG                  S E+  +  +    ++ V T   N
Sbjct: 148 FQTEPSGVFNAWKAHAIGRSSKTVKEFLEKHYEEDLSEEDTIKLTVKSLLEV-VQTGAKN 206

Query: 180 IVLETLK 186
           I +  LK
Sbjct: 207 IEVSVLK 213


>gi|124507175|ref|XP_001352184.1| proteasome precursor, putative [Plasmodium falciparum 3D7]
 gi|23505215|emb|CAD51995.1| proteasome precursor, putative [Plasmodium falciparum 3D7]
          Length = 282

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI+ +  D  V++A D + S G  +    +RK+ R+ +   +     S+     +   
Sbjct: 30  GTTIIGIIYDNGVMLACDSRTSSGTFISNKCSRKINRINENLYVCRSGASAHSQKIIEII 89

Query: 75  LEKKLEQYPNQLLR 88
               +        +
Sbjct: 90  KHYCVSMKNENRKK 103


>gi|67469471|ref|XP_650714.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
 gi|67475615|ref|XP_653498.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
 gi|12229916|sp|Q94561|PSA5_ENTHI RecName: Full=Proteasome subunit alpha type-5
 gi|17980210|gb|AAL50554.1| proteasome alpha subunit [Entamoeba histolytica]
 gi|56467364|gb|EAL45327.1| proteasome alpha subunit, putative [Entamoeba histolytica
           HM-1:IMSS]
 gi|56470455|gb|EAL48112.1| proteasome alpha subunit, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 247

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 18/162 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
            +T++ ++    VV+A + ++S    ++ ++  K+  +      A  +G +ADA TL++ 
Sbjct: 34  GSTVIGIQTKEGVVLAVEKRISS-PLMLGSSIEKIIEIDDHIG-AAVSGLTADARTLIDN 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKD------------WRMDKYLRNLEAMILIA--DKTIT 118
            RLE +  ++      +   +A+              +     R     +LIA  D+T  
Sbjct: 92  ARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDETGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
            +       +  E    A G+G   A S      +   +  E
Sbjct: 152 RLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLRE 193


>gi|258577477|ref|XP_002542920.1| proteasome component PUP2 [Uncinocarpus reesii 1704]
 gi|237903186|gb|EEP77587.1| proteasome component PUP2 [Uncinocarpus reesii 1704]
          Length = 246

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 50/172 (29%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + +V+    +  ++  K+  + +    A  G    +       
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCAMSGLQADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDK------------YLRNLEAMILIA--DKTIT 118
               +  E +  + LR          +                R     +LIA  D+   
Sbjct: 93  RVESQNHEFHYKEPLRVESCTQAICDLALRFGEGADGEESVMSRPFGVALLIAGHDEDGP 152

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
            +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 153 QLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|77999303|gb|ABB16998.1| proteasome-like protein alpha subunit [Solanum tuberosum]
          Length = 248

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 50/167 (29%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        ++ K+ ++        AG    +      
Sbjct: 30  NAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
              ++ +   +  Q      +L +     K        LR      L A         + 
Sbjct: 90  AR-VQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         AIG+    A S  +       + EE  + A+ +
Sbjct: 149 MSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDITREEAVQLALKV 195


>gi|156083220|ref|XP_001609094.1| proteasome beta 2 subunit [Babesia bovis T2Bo]
 gi|154796344|gb|EDO05526.1| proteasome beta 2 subunit, putative [Babesia bovis]
          Length = 218

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 42/152 (27%), Gaps = 8/152 (5%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ ++    V IA D         +K +          + +   AG   D     + ++
Sbjct: 4   TLIGIKGPDFVAIACDTYEKYSIITIKNDDESKIMKIGDSKVMMLAGPLGDRSQFSKMIK 63

Query: 77  KKLEQYPNQLLRSSVELAKDW--------RMDKYLRNLEAMILIADKTITLVITGMGDVL 128
             L+ +  +  +     A            + +    ++ +I   D+    +        
Sbjct: 64  ATLDYHKYKNSKELSTNAAAHFVRLELAEYLRQSPYQVDMLIAGIDQDGPKLFWIDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +      G GG               + EE
Sbjct: 124 CTQADTAVHGYGGFLLRGLLDKEYKPNMTREE 155


>gi|8394072|ref|NP_058978.1| proteasome subunit alpha type-5 [Rattus norvegicus]
 gi|464457|sp|P34064|PSA5_RAT RecName: Full=Proteasome subunit alpha type-5; AltName:
           Full=Macropain zeta chain; AltName: Full=Multicatalytic
           endopeptidase complex zeta chain; AltName:
           Full=Proteasome zeta chain
 gi|286254|dbj|BAA01588.1| proteasome subunit R-ZETA [Rattus sp.]
          Length = 241

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 58/170 (34%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +      +    +    +                  R     +L    D+   
Sbjct: 92  ARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 QLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSTTLKEAIKSSLII 201


>gi|241569237|ref|XP_002402653.1| 20S proteasome, regulatory subunit alpha type PSMA7/PRE6, putative
           [Ixodes scapularis]
 gi|215500070|gb|EEC09564.1| 20S proteasome, regulatory subunit alpha type PSMA7/PRE6, putative
           [Ixodes scapularis]
          Length = 247

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 64/192 (33%), Gaps = 24/192 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + ++   +VV+A + + S+ +   +   RK+  L    ++  FAG +ADA  L++
Sbjct: 31  KGSTAVGIKGANIVVLAVEKK-SVAKLQEERTVRKICLLDDH-VVMAFAGLTADARILID 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A+  +            + A            + 
Sbjct: 89  RARVECQSHKLTVEDPVTLEYITRYIAQLKQRYTQSNGRRPFGISALIAGFDFDGTPRLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAMSIAADICVYT 176
                 +  E    A G                        A ++A +A+     + V  
Sbjct: 149 QTDPSGVYHEWKANATGRSAKTVREYLEKNYAVDKMQPDEGAVKLAIRAL-----LEVIQ 203

Query: 177 NHNIVLETLKVG 188
            HN+ +  ++ G
Sbjct: 204 GHNLEVAIMERG 215


>gi|167389391|ref|XP_001738943.1| proteasome subunit alpha type-5 [Entamoeba dispar SAW760]
 gi|165897610|gb|EDR24708.1| proteasome subunit alpha type-5 [Entamoeba dispar SAW760]
          Length = 247

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 55/161 (34%), Gaps = 16/161 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
            +T++ ++    VV+A + ++S    ++ ++  K+  +      A    ++     +   
Sbjct: 34  GSTVIGIQTKEGVVLAVEKRISS-PLMLGSSIEKIIEIDDHIGAAVSGLTADARTLIDHA 92

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW-----------RMDKYLRNLEA---MILIADKTITL 119
           RLE +  ++      +   +A+             R  K +        +I   D+T   
Sbjct: 93  RLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDETGPR 152

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           +       +  E    A G+G   A S      +   +  E
Sbjct: 153 LFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLRE 193


>gi|240281182|gb|EER44685.1| proteasome component [Ajellomyces capsulatus H143]
          Length = 227

 Score = 55.4 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++KA+  K R L K  I+A F+G + D     E ++  
Sbjct: 29  LGITGKDFTLIAASKAAMRGATILKASDDKTRELSKHTIMA-FSGEAGDTVQFAEYIQAN 87

Query: 79  LEQYPNQLLRSSVELAKD---------WRMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
           ++ Y  +        A               +    +  ++   D       +       
Sbjct: 88  VQLYSMRNEAELSPSAVASFVRGELARSLRSRRPYTVNLLLGGVDPITEKPSLYWLDYLA 147

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          + E+
Sbjct: 148 ALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQ 180


>gi|226489759|emb|CAX75030.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
           japonicum]
          Length = 243

 Score = 55.0 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 47/172 (27%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +           + K+ ++        AG    +      
Sbjct: 26  HAGTCLGIVAKDGIVLAAEKRFINNLLDETVFSEKIYKINDDIACAVAGITADATVLINE 85

Query: 72  LERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITL-VIT 122
           +  + ++     Q P  + +    +                      +  DK     +  
Sbjct: 86  MRLIAQRYLLSYQEPMPVEQLVCHICDLQHGYTMYGGRRPFGVSMLFIGWDKRYGYQLYQ 145

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
                         IGS  + A S      + + + EE        A  +CV
Sbjct: 146 TDPSGNFLGWNATCIGSNSTAAGSILEQDYNPEATVEE--------ATKLCV 189


>gi|167381649|ref|XP_001735801.1| proteasome subunit alpha type-5 [Entamoeba dispar SAW760]
 gi|165902059|gb|EDR27981.1| proteasome subunit alpha type-5 [Entamoeba dispar SAW760]
          Length = 247

 Score = 55.0 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 18/162 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
            +T++ ++    VV+A + ++S    ++ ++  K+  +      A  +G +ADA TL++ 
Sbjct: 34  GSTVIGIQTKEGVVLAVEKRISS-PLMLGSSIEKIIEIDDHIG-AAVSGLTADARTLIDN 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKD------------WRMDKYLRNLEAMILIA--DKTIT 118
            RLE +  ++      +   +A+              +     R     +LIA  D+T  
Sbjct: 92  ARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDETGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
            +       +  E    A G+G   A S      +   +  E
Sbjct: 152 RLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLRE 193


>gi|50546813|ref|XP_500876.1| YALI0B14267p [Yarrowia lipolytica]
 gi|49646742|emb|CAG83127.1| YALI0B14267p [Yarrowia lipolytica]
          Length = 249

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 58/190 (30%), Gaps = 16/190 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   VV++  + + +L     +    K+ +L     +A FAG +ADA  L++
Sbjct: 29  RGTAAVGVKGKDVVILGCEKRSALKLQDPRITPSKICKLDTHVSLA-FAGLNADARILVD 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +         +  +  +
Sbjct: 88  KARVEAQSHRLTVEDPVSVEYISRYIAGVQQRYTQSGGVRPFGISTLIVGFDPNDKVPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-N 179
                  +       AIG                        R A+    ++ V T   N
Sbjct: 148 YQTEPSGIYNAWKANAIGKSSKTVRDFLEKNYEEDMDKAATIRLAIKSLLEV-VQTGAKN 206

Query: 180 IVLETLKVGD 189
           I +  L   +
Sbjct: 207 IEIAILSADN 216


>gi|168022987|ref|XP_001764020.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684759|gb|EDQ71159.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 240

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 70/194 (36%), Gaps = 27/194 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +   +  K+  + +    A  +G +ADA TL+E 
Sbjct: 30  GSTAVGLKTKEGVVLAVEKRITS-VLLEPTSVEKIMEIDEHIGCA-MSGLTADARTLVEH 87

Query: 75  ---------LEKKLEQYPNQLLRSSVELAKDWRM----------DKYLRNLEAMILIA-- 113
                    L  +  ++      S     +              +   R     +LIA  
Sbjct: 88  GRVYHDPACLVLQNHRFSYNEPMSVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGH 147

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
           D++   +          +    AIGSG   A ++ +   +   +   AE +A   +    
Sbjct: 148 DESGPCLYHTDPSGTFWQCDAKAIGSGSEGADTSLQEHFNKNMTLEEAETLALSTLKQVM 207

Query: 171 DICVYTNHNIVLET 184
           +  V T+ N+ +  
Sbjct: 208 EEKV-TSSNVDIAK 220


>gi|289618222|emb|CBI54946.1| unnamed protein product [Sordaria macrospora]
          Length = 245

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVILGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQSHAFNYNEKLRVESCTQAICDLALRFGESADGEESIMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A +  +           AE +  K + 
Sbjct: 152 PSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTIEDAETLVLKTLK 204


>gi|226496753|ref|NP_001152346.1| proteasome subunit alpha type 3 [Zea mays]
 gi|195655367|gb|ACG47151.1| proteasome subunit alpha type 3 [Zea mays]
          Length = 249

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 58/164 (35%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  V+    +  +N R++  + + + +   AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSN-RRIHSVHRHSGLV-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEAASYEKVYGEPIPVKDLADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                +  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|209732934|gb|ACI67336.1| Proteasome subunit beta type-4 precursor [Salmo salar]
 gi|303662096|gb|ADM16064.1| Proteasome subunit beta type-4 precursor [Salmo salar]
          Length = 222

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 60/179 (33%), Gaps = 30/179 (16%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T++L V+  G V+IA D   S G      N  ++ ++    I+ G +G  AD   + + 
Sbjct: 45  GTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTIL-GASGDYADYQYMKQI 103

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
           +E                        + + + E +I       + +       +  E   
Sbjct: 104 IE------------------------QMVIDEELLIGGFYNDESFLGYVDKLGVAYEAPT 139

Query: 135 MAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           +A G G   A    R ++      T++ A  +  + + +       + +   +  +   
Sbjct: 140 VATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVLYYRDARSYNRHEIAIVTKE 198


>gi|170061479|ref|XP_001866250.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
 gi|167879714|gb|EDS43097.1| proteasome subunit beta type 5,8 [Culex quinquefasciatus]
          Length = 264

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%)

Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
          H TT L+ R  G V++A D + + GQ +     +K+  + +  +     G++       
Sbjct: 33 HGTTTLSFRFQGEVIVAVDSRATGGQFIGSQTIKKIVEINEYLLGTLADGAADLVRFTR 91


>gi|115440617|ref|NP_001044588.1| Os01g0811100 [Oryza sativa Japonica Group]
 gi|12229919|sp|Q9LSU0|PSA3_ORYSJ RecName: Full=Proteasome subunit alpha type-3; AltName: Full=20S
           proteasome alpha subunit G; AltName: Full=20S proteasome
           subunit alpha-7
 gi|8671500|dbj|BAA96833.1| alpha 7 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|55297486|dbj|BAD68202.1| putative proteasome subunit alpha type 3 [Oryza sativa Japonica
           Group]
 gi|55297673|dbj|BAD68244.1| putative proteasome subunit alpha type 3 [Oryza sativa Japonica
           Group]
 gi|113534119|dbj|BAF06502.1| Os01g0811100 [Oryza sativa Japonica Group]
 gi|215737208|dbj|BAG96137.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218189257|gb|EEC71684.1| hypothetical protein OsI_04163 [Oryza sativa Indica Group]
 gi|222619429|gb|EEE55561.1| hypothetical protein OsJ_03826 [Oryza sativa Japonica Group]
          Length = 249

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 58/164 (35%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  V+    +  +N R++  +   + +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSN-RRIHSVHWHSGLA-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y               R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                +  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|212543835|ref|XP_002152072.1| proteasome component Pup2, putative [Penicillium marneffei ATCC
           18224]
 gi|210066979|gb|EEA21072.1| proteasome component Pup2, putative [Penicillium marneffei ATCC
           18224]
          Length = 245

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDQHIGCA-MSGLQADARSMIEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +      S    +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQNHAFHFAESLRVESCTQAICDLALRFGEGADGEESVMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|167524615|ref|XP_001746643.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774913|gb|EDQ88539.1| predicted protein [Monosiga brevicollis MX1]
          Length = 263

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 16/190 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +     +++A + +         + A K+ +L    +  G AG +ADA  L+ 
Sbjct: 30  HAGTCLGILAKDGILLAAEKKHVAKLLDQSSAAEKIYKLDDH-VACGVAGITADANILVN 88

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L +  +++            L+    +  + +     LR     +L           + 
Sbjct: 89  SLRQSAQRHLLTFQTPIPIENLVTLVCDTKQAYTQFGGLRPFGTALLFMGWDKHYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
                          IG+    A S  +   S   + +E   +A K ++   D    T+ 
Sbjct: 149 QSDPSGNFGGWKAACIGANSQAAESILKTEYSEDCTLKEALLLAVKVLNKTMDSASLTSD 208

Query: 179 NIVLETLKVG 188
            +   TL   
Sbjct: 209 KLEFATLSRQ 218


>gi|225680870|gb|EEH19154.1| proteasome component Pre1 [Paracoccidioides brasiliensis Pb03]
          Length = 210

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 43/153 (28%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G TV+KA   K R L K   +  F+G + D     E ++  
Sbjct: 12  LGITGKDFTLIAASKAAMRGPTVLKAADDKTRELNKHT-LMAFSGEAGDTVQFAEYIQAN 70

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
           ++ Y  +        A               +    +  ++   D       +       
Sbjct: 71  VQLYSMRNETELSPSAVANFVRGELSRSLRSRRPYTVNLLLGGVDPITEKPSLYWLDYLA 130

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          + E+
Sbjct: 131 ALAPVPYAAHGYAQYYCLSILDKHHHPDITFEQ 163


>gi|322710739|gb|EFZ02313.1| proteasome component Y13 [Metarhizium anisopliae ARSEF 23]
          Length = 251

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYVLNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPRRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        + G+  + A S  +       + +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSAGANNASAQSLLKQDYKEDCTLKEACAMAVKV 195


>gi|221052302|ref|XP_002257727.1| beta3 proteasome subunit [Plasmodium knowlesi strain H]
 gi|193807558|emb|CAQ38063.1| beta3 proteasome subunit, putative [Plasmodium knowlesi strain H]
          Length = 204

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 55/205 (26%), Gaps = 36/205 (17%)

Query: 21  VRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           +     V IA D ++     T +  N  KV ++    +  G +G + D  TL E L  ++
Sbjct: 1   MSGAQCVAIACDLRLGANNFTTISTNFTKVFKMNDY-VYVGLSGLATDIQTLYELLRYRV 59

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLR-----NLEAMILIADKTITLVITGMGDVLEPENGV 134
             Y  +             +   L            ++    +       G  +      
Sbjct: 60  NLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVKHTFDDEGKKIRTFEPY 119

Query: 135 MAI----------------GSGGSYALSAARALMSTQNSAE---EIARKAMSIAADIC-- 173
           +                  G           +L       +   E   + +  A D    
Sbjct: 120 LTAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQCLLSALDRDCL 179

Query: 174 ------VY--TNHNIVLETLKVGDE 190
                 VY  T  +I+ + LK   +
Sbjct: 180 SGWGAEVYVLTPDSIMKKKLKARMD 204


>gi|83317531|ref|XP_731201.1| proteasome subunit beta [Plasmodium yoelii yoelii str. 17XNL]
 gi|23491164|gb|EAA22766.1| proteasome beta-subunit, putative [Plasmodium yoelii yoelii]
          Length = 275

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 67/222 (30%), Gaps = 62/222 (27%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            TTI+ +  +  V++A D + S G  V    +RK+ R+ +   +   G +  S     ++
Sbjct: 29  GTTIIGIIYEHGVMLACDTRTSSGTFVSNKCSRKINRINENIYVCRSGASAHSQKVIEVI 88

Query: 73  ERLEKKLEQYPNQLLR---------------------------SSVELAKDWRMDKYL-- 103
           +     ++    +  R                           + +   K +  DK++  
Sbjct: 89  KHYCASMKSENRKKGRFHENEVITDDINDEEIDINQINNINNNNVIAKNKYYYDDKFMDY 148

Query: 104 -------RNLEAMILIADKT---ITLVITGMG-------------DVLEPENGVMAIGSG 140
                    +   ++ A+       L+  G                 +  +      GSG
Sbjct: 149 NPLVENVAYITKKLVYANNNFLSCGLIFGGYDKIKKQQLYSVNLNGSIIQKYDYAVSGSG 208

Query: 141 GSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
             Y  S  +       + +E   +    +  A    +Y N N
Sbjct: 209 SIYIQSYLQDKYKKNMTKKECFDLILNCVKYA----IY-NDN 245


>gi|322694126|gb|EFY85964.1| proteasome component Y13 [Metarhizium acridum CQMa 102]
          Length = 251

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYVLNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPRRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        + G+  + A S  +       + +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSAGANNASAQSLLKQDYKEDCTLKEACAMAVKV 195


>gi|255570823|ref|XP_002526364.1| proteasome subunit beta type, putative [Ricinus communis]
 gi|223534323|gb|EEF36035.1| proteasome subunit beta type, putative [Ricinus communis]
          Length = 290

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    +++A D   S G T+   +  +++ +GK +++ G +G  +D   +L  
Sbjct: 30  GTSVVALKYKDGILMAADMGASYGSTLRYKSVERIKPIGKHSLL-GASGEISDFQEILRY 88

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           L++ +     +L  S     +   +++     +  +L A   I+  
Sbjct: 89  LDELIFYCIMKLPASYGSTLRYKSVERIKPIGKHSLLGASGEISDF 134



 Score = 43.0 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 48/141 (34%), Gaps = 13/141 (9%)

Query: 35  VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK---KLEQYPNQLLRSSV 91
            S G T+   +  +++ +GK +++ G +G  +D   +L  L++   K +        S  
Sbjct: 102 ASYGSTLRYKSVERIKPIGKHSLL-GASGEISDFQEILRYLDELIPKPDDNMWDDGNSLG 160

Query: 92  ELAKDWRMDKYLR---------NLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGS 142
                  + + +              ++         + T     +  E+  +A G G  
Sbjct: 161 PKEVHNYLKRVMYNRRNKFNPLWNSVVLGGVKNGQKYLGTVSMIGVNYEDNHVATGFGNH 220

Query: 143 YALSAARALMSTQNSAEEIAR 163
           +A    R       S E+  +
Sbjct: 221 FAWPLLRDEWHENLSFEDGVK 241


>gi|302916049|ref|XP_003051835.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732774|gb|EEU46122.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 269

 Score = 55.0 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 49/168 (29%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   VVV+  + + ++     +    K++ L     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGTDVVVLGCEKRSAMKLQDTRITPSKIQLLDNHVALA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 89  KARLEAQSHRLSVEDPVTIDYITKYVAGVQQRYTQAGGVRPFGISTLIVGFDNGSKVPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  +       AIG                    E   R A+  
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNYKEDMDREATIRLAIKS 196


>gi|209878941|ref|XP_002140911.1| proteasome subunit alpha type 4 [Cryptosporidium muris RN66]
 gi|209556517|gb|EEA06562.1| proteasome subunit alpha type 4, putative [Cryptosporidium muris
           RN66]
          Length = 251

 Score = 55.0 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 39/154 (25%), Gaps = 11/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLERL 75
            + +     V++A D  V            K+  +    I   AG    +    +     
Sbjct: 34  TIGILCKDGVILAADKAVVSKLLDPGRTLEKLYTIDNHIICAVAGLTADANILISQARID 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGD 126
            ++ +          QL+    +  + +     LR      L A         +      
Sbjct: 94  AQRYQYTYGERQPVEQLVIQICDRKQSYTQFGGLRPFGVSFLFAGYDHYHGYQLYQSDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                    AIG     A S  +       S +E
Sbjct: 154 GNYSGWMATAIGQNNQTATSMLKQEWKNDLSVDE 187


>gi|294928984|ref|XP_002779246.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
           50983]
 gi|239888275|gb|EER11041.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
           50983]
          Length = 175

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 39/151 (25%), Gaps = 11/151 (7%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +     V+IA D  V     V              N +   AG  AD+   LE + + +
Sbjct: 7   GIAGKDWVIIAADSHV-EQSIVKFKTTEDKIYEMDNNKLVAAAGPQADSNQFLEFISRNV 65

Query: 80  EQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTIT--LVITGMGDVLE 129
           E Y           A            + K    +  +I   D       +         
Sbjct: 66  ELYALVNGIQLTTHALANFTRNELADALRKGPYQVNMLIGGYDDKDGSASLYYMDYLASC 125

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE 160
            +    A G    + L     L     + EE
Sbjct: 126 QKITRGAHGYAAYFVLGLLDKLYKKDMTQEE 156


>gi|225713306|gb|ACO12499.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
 gi|290562017|gb|ADD38406.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
          Length = 206

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 47/155 (30%), Gaps = 12/155 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +  +  V++A D Q      +M  +  +       +++    G S D     E + 
Sbjct: 3   TSIGIAFNDFVMVATD-QTCAQSILMLKDTCEKTYPLTNHLLMSALGESGDTTQFAEFMA 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAM-----ILIADK--TITLVITGMG 125
           K ++ Y  +               +    YLR+         I   DK      + T   
Sbjct: 62  KNIQLYKMRNAYEMSPSEAANFTRRNLADYLRSRTPFHVNLLIAGYDKKSDKAELYTMDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                +    + G GG ++            + EE
Sbjct: 122 LAGMVKTEHASHGYGGIFSSGILDRNYRPDMTVEE 156


>gi|321468217|gb|EFX79203.1| hypothetical protein DAPPUDRAFT_231056 [Daphnia pulex]
          Length = 250

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +V++  + + S+ +   +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 31  KGSTAVGVRGKNLVILGVEKK-SVAKLQEERTVRKICLLDDH-VVMAFAGLTADARILIN 88

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R   + + +   +               L + +      R      L+A         + 
Sbjct: 89  RARIECQSHKLTVEDPVTLEYITRYIAGLKQRYTQSNGRRPFGISCLLAGFDFDGTPHLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-TQNSAEE----IARKAM 166
                    E    A G              +  +   EE    +A +A+
Sbjct: 149 QTDPSGTYHEWKANATGRNAKTVREFLEKNYNVEEMEDEEKVIKLAIRAL 198


>gi|119481163|ref|XP_001260610.1| proteasome component Pup2, putative [Neosartorya fischeri NRRL 181]
 gi|119408764|gb|EAW18713.1| proteasome component Pup2, putative [Neosartorya fischeri NRRL 181]
          Length = 252

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +L+E 
Sbjct: 40  GSTAIGVATSEGVILGVEKRVTS-TLLEASSVEKIVEIDQHIGCA-MSGLQADARSLVEH 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 98  ARVECQNHAFHYAEPLRVESTTQAICDLALRFGETGDDDESVMSRPFGVALLIAGYDEDG 157

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 158 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLPEAETLVLKTLK 210


>gi|289644453|ref|ZP_06476531.1| conserved hypothetical protein [Frankia symbiont of Datisca
           glomerata]
 gi|289505743|gb|EFD26764.1| conserved hypothetical protein [Frankia symbiont of Datisca
           glomerata]
          Length = 180

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 52/165 (31%), Gaps = 13/165 (7%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T I+ +  DG V+I GD     G ++      KV R   G  I GF  S      L   L
Sbjct: 2   TCIVGLEHDGRVIIGGDSAGVAGYSITVRADTKVFR--NGEFIMGFTSSFRMGQLLRYSL 59

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE---- 131
                Q  +     + +     R              ++     +    G +   +    
Sbjct: 60  IPPAPQTWDVDRFMATDFISAVRDCLREGGYTRTESGSEAGGVFLAGIRGRLYRIDSDFQ 119

Query: 132 -----NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
                +   A+G G  +AL +         S E+  + A+  AA 
Sbjct: 120 IGRSIDLYDAVGCGEEFALGSLHGSGH--LSPEDRVQLALEAAAH 162


>gi|50555423|ref|XP_505120.1| YALI0F07469p [Yarrowia lipolytica]
 gi|49650990|emb|CAG77927.1| YALI0F07469p [Yarrowia lipolytica]
          Length = 252

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +T + ++    VV A +  V+    V  AN R   +    +I   ++G   D   ++ 
Sbjct: 33  NGSTSIAIKCKDGVVFALEKIVTSKLLVPGANQRI--QTVDKHIGVVYSGLVPDGRHMVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY-----------LRNLEAMILIADKTITLVIT 122
           R   +   + +   ++    +   R+  Y              +  ++   D+    +  
Sbjct: 91  RGRSEAYNWRSTYKQAIPVDSFADRLGSYTQAYTLYNSVRPFGIATILGGVDEDGPHLFM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A G G   A +    L     SA +   +A  I
Sbjct: 151 IEPSGSFWGYHGAAAGKGRQTAKNELEKLDLPNISARDAVNEAARI 196


>gi|239788585|dbj|BAH70965.1| ACYPI006981 [Acyrthosiphon pisum]
          Length = 271

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 61/195 (31%), Gaps = 21/195 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA   L +  +  V++A + +           + K+ +L    +   AG    +    + 
Sbjct: 30  HAGACLGILTNDGVLLAAEKRNVNKLLDETCGSEKIYKLNDDMVCSVAGITADANVLVSE 89

Query: 72  LERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++        +          ++ + +      R     IL           +  
Sbjct: 90  LRSISERYRMQYGDSIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDSHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMS---IAADICVY 175
                         IG+  + AL++ +          + A+++A K +S    A  +   
Sbjct: 150 SDPSGNYCGWKATCIGTNSAAALASLKTEYKEGQMTLDEAKKLAVKILSKTLDATKL--- 206

Query: 176 TNHNIVLETLKVGDE 190
           T   + + TLK   +
Sbjct: 207 TADKVEMGTLKRESD 221


>gi|219123814|ref|XP_002182212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406173|gb|EEC46113.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 231

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 44/169 (26%), Gaps = 22/169 (13%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVS--LGQTVMKANARKVRRLGKGNII------- 58
               +++   +  V     VV++ D ++    G  +++ N  K+     G +I       
Sbjct: 9   FEPYQLNGGLVAAVAGRDFVVLSTDTRLMGPSGYDILERNHVKIETTNSGELIVHASTKL 68

Query: 59  ------AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI 112
                  G +G +AD   L   +                  A    + + L +       
Sbjct: 69  VYAPTFVGSSGCNADCEMLKRTVRADTRAAFYHGESDIQTAAVATLLGQMLYSRRGFPFY 128

Query: 113 -------ADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
                   +     V          + GV   G+G             +
Sbjct: 129 SFCVVGGMENGAGKVYVYDAIGSYEQVGVATSGTGRELLQPILDRSFRS 177


>gi|237840039|ref|XP_002369317.1| proteasome subunit alpha type 2, putative [Toxoplasma gondii ME49]
 gi|211966981|gb|EEB02177.1| proteasome subunit alpha type 2, putative [Toxoplasma gondii ME49]
 gi|221484695|gb|EEE22989.1| proteasome subunit alpha type, putative [Toxoplasma gondii GT1]
 gi|221504878|gb|EEE30543.1| proteasome subunit alpha type, putative [Toxoplasma gondii VEG]
          Length = 236

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERLE 76
           L ++    VVIA + +++    + +++ RKV         + AG             +  
Sbjct: 37  LGIKAKNGVVIAAEKKLTT-PLIEESSVRKVEHFTPNIGCVCAGMPADYRVVMKKGRKEA 95

Query: 77  KKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
                + N      QL++    + +++     +R     +L+A  D+    +        
Sbjct: 96  AAYNLFYNSPISVSQLVQDVAAVMQEYTQSGGVRPFGLSLLVAGYDEYGPQLYQVDPSGA 155

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  AIG     A +      +     E+    A+
Sbjct: 156 YFGWKASAIGRDMQNAKTFLEKRYNPDIELEDAIHTAI 193


>gi|195386586|ref|XP_002051985.1| GJ17300 [Drosophila virilis]
 gi|194148442|gb|EDW64140.1| GJ17300 [Drosophila virilis]
          Length = 206

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ ++    +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHAHSVVVMKEDENKIHKVADNLLIST-VGESGDTEQFTEFIA 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADK--TITLVITGMGD 126
           K +  Y  +        +      K L        R    M +          +      
Sbjct: 62  KNIALYKMRNGYDLSPHSAAHFTRKNLAESLRSRTRYQVFMFIAGYDPAEGPELTFIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G G  +  S          + EE
Sbjct: 122 ASAQSVNYAGHGYGSMFCSSIFDRYWHPNITQEE 155


>gi|168036511|ref|XP_001770750.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677968|gb|EDQ64432.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 282

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   + S     + ++ +K+ ++     IA  AG +AD   L   
Sbjct: 32  GSAAIGLRSKTHVVLAAVNKASSE---LSSHQKKLFKIDNHIGIA-MAGLTADGRVLSRY 87

Query: 75  LEKKLEQYP---------NQLLRSSVELAK--DWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +           +L+    + A+    R  K    +  ++   D+T   +   
Sbjct: 88  MRSECINHKFVYESPLPVGRLVVQVADKAQVCTQRSWKRPYGVGLLVAGLDETGPHLYQN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA--EEIARKAMSI 168
                  E    AIGS    A +       +      EE+ R A+  
Sbjct: 148 CPSGNYFEFHAFAIGSRSQAAKTYLERKFESFMDCSKEELVRHALHA 194


>gi|321476735|gb|EFX87695.1| hypothetical protein DAPPUDRAFT_306433 [Daphnia pulex]
          Length = 255

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 44/165 (26%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + +R    VV A +  V+       AN R        G  +AG    S       
Sbjct: 33  NSGTAVALRGKDGVVFAVEKLVTSKLYEAGANRRIFNIDTHIGMAVAGLLADSRQIVETA 92

Query: 73  ERLEKKLE-QYPNQLL-------RSSVELAKDWRMDKYLRNLEAMILIADK-TITLVITG 123
                    +Y   +         +  + A               +   D+     +   
Sbjct: 93  RTEASNYRAEYGGNIPVKYLADRVAMYKHAYTLYSAVRPFGCSVALGSYDEIDGPQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       A+G     A +    L     +  E+ ++A  I
Sbjct: 153 DPSGVSFGYLGCAMGKARQAAKTEMEKLKLKDMTCLELIKEAAKI 197


>gi|195488764|ref|XP_002092452.1| ProsMA5 [Drosophila yakuba]
 gi|194178553|gb|EDW92164.1| ProsMA5 [Drosophila yakuba]
          Length = 244

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 57/172 (33%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    ++ +   K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTPEGVVLAVEKRITS-PLMVSSTVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKT-- 116
              + + +           +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAG 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +           +G  AIGSG   A    +   + Q + ++    +++ 
Sbjct: 152 KPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDNFTNQMTLKDAIELSLTT 203


>gi|46254510|gb|AAS86228.1| testes-specific alpha4-t2 proteasome subunit [Drosophila simulans]
 gi|46254526|gb|AAS86236.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           mauritiana]
 gi|46254530|gb|AAS86238.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           mauritiana]
 gi|46254532|gb|AAS86239.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           mauritiana]
          Length = 252

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 54/162 (33%), Gaps = 15/162 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R +  +V+  + + S+G    +   RK+  L    ++  F+G +ADA  L+ 
Sbjct: 30  RGSTVVGLRTNNAIVLGVEKR-SVGDLQEERMVRKICMLDDH-VVMTFSGLTADARILVS 87

Query: 74  RLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +     +            +L +++      R      L+          + 
Sbjct: 88  RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-AEEIA 162
                 +  E      G                  + A+E A
Sbjct: 148 QTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAA 189


>gi|195353149|ref|XP_002043068.1| Pros28.1B [Drosophila sechellia]
 gi|46254534|gb|AAS86240.1| testes-specific alpha4-t2 proteasome subunit [Drosophila sechellia]
 gi|194127156|gb|EDW49199.1| Pros28.1B [Drosophila sechellia]
          Length = 252

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 54/162 (33%), Gaps = 15/162 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R +  +V+  + + S+G    +   RK+  L    ++  F+G +ADA  L+ 
Sbjct: 30  RGSTVVGLRTNNAIVLGVEKR-SVGDLQEERMVRKICMLDDH-VVMTFSGLTADARILVS 87

Query: 74  RLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +     +            +L +++      R      L+          + 
Sbjct: 88  RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-AEEIA 162
                 +  E      G                  + A+E A
Sbjct: 148 QTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAA 189


>gi|328860067|gb|EGG09174.1| hypothetical protein MELLADRAFT_52069 [Melampsora larici-populina
           98AG31]
          Length = 194

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 12/152 (7%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +     V+ A D   +    V        +++   +++  ++G   D     E +E+ L
Sbjct: 6   GITGKDFVIFASDSCANR-SIVKMKAGEDKQKVVSKHVVMAYSGEPGDTVQFAEYVERNL 64

Query: 80  EQY-PNQLLRSSVELAKDW--------RMDKYLRNLEAMILIAD--KTITLVITGMGDVL 128
             Y     +      A  W           +   ++  ++   D  +++ ++        
Sbjct: 65  RLYGIRNHVELLPHEAASWTRNQLATSLRSRKPYSVNMLLGGYDTARSVPMLYWIDYLGT 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             E    A G G  + LS      S   + EE
Sbjct: 125 MAEVPYAAHGYGAYFCLSTMDRFHSPDMNLEE 156


>gi|328768571|gb|EGF78617.1| hypothetical protein BATDEDRAFT_30413 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 243

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 54/171 (31%), Gaps = 19/171 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    +  ++  KV  +      A  +G  AD+ T+++ 
Sbjct: 34  GSTAVGIQTSEGVVLAVEKRVTS-PLLESSSIEKVMEIDSHLGCA-MSGLIADSRTMIDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---------------RMDKYLRNLEAMILIA--DKTI 117
              + + +           +                        R     +LI   D+  
Sbjct: 92  ARVEAQNHWFTYNEKIKVESVSQAVCDLALRFGESADGEDALMSRPFGIALLIGGVDEKG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             +          +    AIGSG   A +  +       +  E    ++ +
Sbjct: 152 PQLFHADPSGTLTQYDAKAIGSGSEGAQTELQEQFHKSLTLAEAVSLSLKV 202


>gi|17508491|ref|NP_492360.1| Proteasome Alpha Subunit family member (pas-4) [Caenorhabditis
           elegans]
 gi|12229917|sp|Q95005|PSA7_CAEEL RecName: Full=Proteasome subunit alpha type-7; AltName:
           Full=Proteasome subunit alpha 4
 gi|3874776|emb|CAB02269.1| C. elegans protein C36B1.4, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 253

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 19/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    +VI  + + S+         RK+  +    ++A FAG SADA  L++
Sbjct: 29  KGSTAVGVRGKDCIVIGVEKK-SIPALQDDRTIRKIHMIDDHVMLA-FAGLSADARVLVD 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTI---TLVI 121
           R   + + Y   L            +             R     +LI          + 
Sbjct: 87  RARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAMS 167
                    E    A G G            S +N+ +E     +  K+++
Sbjct: 147 KTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLA 197


>gi|320167332|gb|EFW44231.1| 20S proteasome subunit alpha V [Capsaspora owczarzaki ATCC 30864]
          Length = 243

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 61/172 (35%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    ++  +  K+  + +    A  +G +ADA T+++ 
Sbjct: 34  GSTAIGIQTTEGVVLAVEKRITS-PLLVPTSIEKIVEVDRHIGCA-MSGLTADARTMIDF 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM----------------DKYLRNLEAMILIA--DKT 116
              + + +      S    +    +                    R     +LIA  D+ 
Sbjct: 92  GRLEAQNHWFTYNESIKVESVTQALCDLALRFGEDQDDDDESTMSRPFGVALLIAGVDEN 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +          +    AIGSG   A +A +       S  E A  A+S 
Sbjct: 152 GPQLFHTDPSGTFTQFDAKAIGSGSEGAQTALQDAYHATLSLREAAILALST 203


>gi|46254528|gb|AAS86237.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           mauritiana]
          Length = 252

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 15/162 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R +  +V+  + + S+G    +   RK+  L    ++  F+G +ADA  LL 
Sbjct: 30  RGSTVVGLRTNNAIVLGVEKR-SVGDLQEERMVRKICMLDDH-VVMTFSGLTADARILLS 87

Query: 74  RLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +     +            +L +++      R      L+          + 
Sbjct: 88  RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-AEEIA 162
                 +  E      G                  + A+E A
Sbjct: 148 QTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAA 189


>gi|330914577|ref|XP_003296695.1| hypothetical protein PTT_06861 [Pyrenophora teres f. teres 0-1]
 gi|311331036|gb|EFQ95202.1| hypothetical protein PTT_06861 [Pyrenophora teres f. teres 0-1]
          Length = 261

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 12/148 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++KA+  K R L     +  F+G + D     E ++  
Sbjct: 63  LGITGKDFTLIASSKAAMRGATILKASDDKTRVLNTHT-LMTFSGEAGDTVQFAEYIQAN 121

Query: 79  LEQYPNQLLRSSVELAKDW----RMDKYLRNLEAMILI-------ADKTITLVITGMGDV 127
           ++ Y  +        A        + + LR+ +   +               +       
Sbjct: 122 VQLYSMRNNMELSPAATANFVRGELARALRSRKPYTVNLLLGGYDTIADKPTLYWIDYLA 181

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQ 155
            +      A G    Y LS         
Sbjct: 182 SQASLPYAAHGYAQYYCLSLLDKHHHPD 209


>gi|254581746|ref|XP_002496858.1| ZYRO0D09746p [Zygosaccharomyces rouxii]
 gi|238939750|emb|CAR27925.1| ZYRO0D09746p [Zygosaccharomyces rouxii]
          Length = 253

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 14/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTL 71
           HA T + +  +  +V+A + +V+        +  K+ RL    +  +AG    +      
Sbjct: 31  HAGTAIGIMAEDGIVLAAERKVTSKLLEQDTSTEKLYRLNDKIVVAVAGLTSDAEILINT 90

Query: 72  LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                +  L+ Y        L++   ++ + +     LR      + A   D+    + T
Sbjct: 91  ARIHAQNYLKTYNEDIPVEILVKRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHN 179
                       +++G+  S A +  +         + A E+A K +S   D    T   
Sbjct: 151 SNPSGNYTGWKAISVGANTSAAQTLLQVDYKDDIKVDGAIELALKTLSKTTDSSALTYDR 210

Query: 180 IVLETLKVGD 189
           +   T+K+G+
Sbjct: 211 VEFATIKLGE 220


>gi|67615080|ref|XP_667410.1| proteasome subunit alpha type 3 [Cryptosporidium hominis TU502]
 gi|54658537|gb|EAL37173.1| proteasome subunit alpha type 3 [Cryptosporidium hominis]
          Length = 251

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 18/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + +  +  +V A D  V+    V   N R         I    AG   D+  ++ 
Sbjct: 33  NSGTTIAMIYNSGIVFAVDKYVASKMMVAGTNRRVFAI--DNQIGCCVAGFVTDSNKIIS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTIT-LVI 121
               +   Y      S        R+  Y+                ++   D+     + 
Sbjct: 91  IARSESLNYQKIYGNSIPIRVLAERIAMYMHNFTLYGSVRPFGCSILLGGLDQDRGVELY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
                    +   MA+G G  +A +    L+    S E+    A+  AA
Sbjct: 151 CIHPSGSCYKYCAMAVGKGRQFARTDLEKLIEKNLSEED----ALYEAA 195


>gi|195433599|ref|XP_002064798.1| GK15122 [Drosophila willistoni]
 gi|194160883|gb|EDW75784.1| GK15122 [Drosophila willistoni]
          Length = 207

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    +++A D   +    VMK +  K+ ++    +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFIMLAADSTHARSIIVMKEDENKIHKVSDNLLIST-TGESGDTDQFTEFIS 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIA------DKTITLVITGMGD 126
           K +  Y  +        A      K    YLR+     +         +    +      
Sbjct: 62  KNISLYKMRNGYDLSPRAAAHFTRKNLAEYLRSRTPYQVFMFVGGYDPQEGPELTFIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G G  +  S          + EE
Sbjct: 122 ATAKSVNYAGHGYGSIFCSSIYDRYWHPNITQEE 155


>gi|291241112|ref|XP_002740447.1| PREDICTED: proteasome alpha 3 subunit-like [Saccoglossus
           kowalevskii]
          Length = 254

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/164 (9%), Positives = 39/164 (23%), Gaps = 9/164 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + +R    +V   +  V      + AN R        G  +AG    +       
Sbjct: 33  NSGTAIAIRGKDGIVFGVEKLVLSKLYEVGANKRIFHVDKHVGMAVAGLLADARQIVETA 92

Query: 73  ERLEKKLE--------QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
                                   +    A              ++   +     + +  
Sbjct: 93  RDEAANYRSTYGSPIPLKYLTDRVAMYIHAYTLYSSVRPFGCGVILGSYENDGPQLYSID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +       + G     A +    L     + +E+ ++   I
Sbjct: 153 PSGVSWGYHGCSTGKAKQAAKTEIEKLKMQDMTMKELVKEVAKI 196


>gi|320165318|gb|EFW42217.1| proteasome subunit alpha type 7 [Capsaspora owczarzaki ATCC 30864]
          Length = 250

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/170 (11%), Positives = 46/170 (27%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+A + + ++         RK+  L    +   FAG +ADA  L+ 
Sbjct: 31  KGTAAVGVQGKDIVVLAVEKRSTVKLQ-EPRTVRKICVLDDH-VCMTFAGLTADARVLVN 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------------MILIADKTITLVI 121
           R   + + +   +            +    +                ++         + 
Sbjct: 89  RARIECQSHRLTVEDPVTVEYITRYIAGVQQKYTQSGGVRPFGISTLIMGFDYDGTPRLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                         A G              +       +    +A +A+
Sbjct: 149 QTDPSGTYSAWKANATGRSSKTVREFLEKHYTDAVAGNDDEVVRLAIRAL 198


>gi|195498293|ref|XP_002096460.1| GE25043 [Drosophila yakuba]
 gi|194182561|gb|EDW96172.1| GE25043 [Drosophila yakuba]
          Length = 251

 Score = 54.6 bits (130), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 53/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+ +       RK+  L     +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSKMQEYRTVRKITMLDNHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +      +           +L + +      R      LI          + 
Sbjct: 88  RGQVECQSHRLNFENAVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGIDPNGSPRLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                 +  E    A G   +                    A ++A +A+
Sbjct: 148 HTEPSGIFYEYKASATGRSANTVKEFFEKAYRDDEVTTKCGAIKLAMRAL 197


>gi|71032145|ref|XP_765714.1| proteasome subunit beta type 2 [Theileria parva strain Muguga]
 gi|68352671|gb|EAN33431.1| proteasome subunit beta type 2, putative [Theileria parva]
          Length = 212

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 39/154 (25%), Gaps = 8/154 (5%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ +     V +A D         +K +          + +   AG   D     E + 
Sbjct: 3   TLIGICGRDFVAVATDTYEKHSIVTLKNDDDSKIMQIDDSKLLLLAGPCCDRNQFGEYIR 62

Query: 77  KKLEQYPNQLLRSSVELAKDW--------RMDKYLRNLEAMILIADKTITLVITGMGDVL 128
           K +  +  +        +            + K    ++ ++   D     +        
Sbjct: 63  KSVHYHRYKTSFDMTTKSMAHFVRQQLAEYLRKSPYQVDLLVAGFDNNGPKLYWIDYLAS 122

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             E      G GG +             + EE  
Sbjct: 123 STEVDRAVHGYGGHFLRGLLDKEYHENLTVEEAV 156


>gi|71001590|ref|XP_755476.1| proteasome component Pup2 [Aspergillus fumigatus Af293]
 gi|66853114|gb|EAL93438.1| proteasome component Pup2, putative [Aspergillus fumigatus Af293]
 gi|159129544|gb|EDP54658.1| proteasome component Pup2, putative [Aspergillus fumigatus A1163]
          Length = 250

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +L+E 
Sbjct: 38  GSTAIGVATSEGVILGVEKRVTS-TLLEASSVEKIVEIDQHIGCA-MSGLQADARSLIEH 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 96  ARVECQNHAFHYAEPLRVESTTQAICDLALRFGETGDDDESVMSRPFGVALLIAGYDEDG 155

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 156 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLPEAETLVLKTLK 208


>gi|255938979|ref|XP_002560259.1| Pc15g00320 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584881|emb|CAP82918.1| Pc15g00320 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 246

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA  L+E 
Sbjct: 34  GSTAIGVATSEGVILGVEKRVTS-TLLEASSVEKIVEIDQHIGCA-MSGLQADARNLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQNHAFHYAEPLRVESTTQAICDLALRFGESGDDEESVMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|145495683|ref|XP_001433834.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400954|emb|CAK66437.1| unnamed protein product [Paramecium tetraurelia]
          Length = 243

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 23/196 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             + L ++ +  VV+AG+ +++    +   +  KV  +    +    +G   DA TL+E 
Sbjct: 34  GASALAIKVNEGVVLAGERKLNS-TLLEPKSIEKVYEIDTH-LACTASGFIPDARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELA---------------KDWRMDKYLRNLEAMILIADKTI-- 117
              + + +           A                     K  R     +LIA  +   
Sbjct: 92  ARVESQNHKFNYGEPINVRALTQIVCDLALDFGESDSKNKTKMSRPYGVALLIAGVSDQG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
             +          E     IG+      S  +       +   AE +A   +    +  +
Sbjct: 152 PQIYQTDPTGTMIEYQAKGIGAADEGIQSILKEQYKQDLTLEQAERLAILCLKNVMEEKI 211

Query: 175 YTNHNIVLETLKVGDE 190
             N N+ L  +   ++
Sbjct: 212 -NNKNVELAVITTAEK 226


>gi|50416403|ref|XP_457549.1| DEHA2B13860p [Debaryomyces hansenii CBS767]
 gi|49653214|emb|CAG85559.1| DEHA2B13860p [Debaryomyces hansenii]
          Length = 250

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 15/184 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLL 72
           A T + +     VV+A + + +        +A K+  L    I   AG    ++      
Sbjct: 31  AGTAIGILSTEGVVLACEKKFTSKLLDDDGSAEKLYVLNDNMICAVAGMTADASILVNNA 90

Query: 73  ER-LEKKLEQY-----PNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVITG 123
               ++ L+ Y        L+R   ++ + +     LR      L A   D+    + T 
Sbjct: 91  RVNAQQYLKLYNEDIPCESLIRKICDIKQGYTQHGGLRPFGVSFLYAGYDDRYNFQLFTS 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYTNHNIVL 182
                       +IG+  S + +  +       + +E    A+ I +  I    N N+  
Sbjct: 151 NPSGNYSGWKATSIGANNSASQTLLKKDYKDDMNLKEACELAIKILSKTID---NSNLNS 207

Query: 183 ETLK 186
           + L+
Sbjct: 208 DKLE 211


>gi|195576095|ref|XP_002077912.1| GD23166 [Drosophila simulans]
 gi|194189921|gb|EDX03497.1| GD23166 [Drosophila simulans]
          Length = 211

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 14/163 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL V+    V++A D  VS     +     +  R+    +I+  AG   D     + ++
Sbjct: 3   TILGVKGTDFVILASDTMVSKSGMWLDDEVERTNRISDCCMIST-AGDGGDCLQFSDFIQ 61

Query: 77  KKLEQYPNQLLRSSVELAK---------DWRMDKYLRNLEAMILIAD-KTITLVITGMGD 126
           + ++ Y                       +R       +  ++   D  +   +      
Sbjct: 62  RNMDLYKVTNGYDLTVRGAVHFIRSQLTTYRKSNCNYKVALLVGGYDLSSGPELHYMDYF 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                      G G ++                 A ++ +K +
Sbjct: 122 GNSVPVRYGGHGIGINFCTPIIEEFYKPDMDTQAAYDVIKKCV 164


>gi|154274566|ref|XP_001538134.1| proteasome component Y13 [Ajellomyces capsulatus NAm1]
 gi|150414574|gb|EDN09936.1| proteasome component Y13 [Ajellomyces capsulatus NAm1]
          Length = 251

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E+   A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEVCGMAVKV 195


>gi|169845445|ref|XP_001829442.1| proteasome subunit alpha type 5 [Coprinopsis cinerea okayama7#130]
 gi|116509507|gb|EAU92402.1| proteasome subunit alpha type 5 [Coprinopsis cinerea okayama7#130]
          Length = 242

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V     +  ++  K+  +      A  +G +ADA T+++ 
Sbjct: 34  GSTTVGIKTPEGVVLAVEKRV-QSPLLESSSIEKIMEIDTHLGCA-MSGLTADARTMIDH 91

Query: 75  LEKKLEQY-----PNQLLRSSVELAKDWRM----------DKYLRNLEAMILIA--DKTI 117
                + +         + S  +   D  +              R     +LIA  D+  
Sbjct: 92  ARVTAQNHAFTYDERIKVESVTQAVCDLALRFGESVHDEEAMMSRPFGVALLIAGIDELG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
             +               AIGSG   A S  +     Q S +E   +A + + 
Sbjct: 152 PQLYHTDPSGTFIRYEAKAIGSGSEAAQSELQDKWHKQMSLKEAQILALRVLK 204


>gi|119178760|ref|XP_001241019.1| conserved hypothetical protein [Coccidioides immitis RS]
          Length = 245

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 50/172 (29%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + +V+    +  ++  K+  + +    A  G    +       
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCAMSGLQADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDK------------YLRNLEAMILIA--DKTIT 118
               +  E +  + LR          +                R     +LIA  D+   
Sbjct: 93  RVESQNHEFHYKEPLRVESCTQAICDLALRFGEGADGEESVMSRPFGVALLIAGYDEDGP 152

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
            +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 153 QLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|3649671|emb|CAA09596.1| Pros26 [Drosophila melanogaster]
          Length = 61

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 6  DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANAR 47
                + +  +I+ +  D   VIA D ++S G  +     R
Sbjct: 20 PDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQR 61


>gi|325116030|emb|CBZ51584.1| hypothetical protein NCLIV_013780 [Neospora caninum Liverpool]
          Length = 236

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 50/158 (31%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERLE 76
           L ++    VVIA + +++    + +A+ RKV         + AG             +  
Sbjct: 37  LGIKAKNGVVIAAEKKLTT-PLIEEASVRKVEHFTPNIGCVCAGMPADFRVVMKKGRKEA 95

Query: 77  KKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
                +        QL++    + +++     +R     +L+A  D+    +        
Sbjct: 96  AAYNLFYKTPISVSQLVQDVAAVMQEYTQSGGVRPFGLSLLVAGYDEYGPQLYQVDPSGA 155

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  AIG     A +      +     E+    A+
Sbjct: 156 YFGWKASAIGRDMQNAKTFLEKRYNPDIELEDAIHTAI 193


>gi|121699598|ref|XP_001268075.1| proteasome component Pre9, putative [Aspergillus clavatus NRRL 1]
 gi|119396217|gb|EAW06649.1| proteasome component Pre9, putative [Aspergillus clavatus NRRL 1]
          Length = 255

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAEKKVTSKLLEQDTSAEKLYTLNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYGEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACAMAVKV 195


>gi|226489755|emb|CAX75028.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
           japonicum]
 gi|226489761|emb|CAX75031.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
           japonicum]
          Length = 247

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 47/172 (27%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +           + K+ ++        AG    +      
Sbjct: 30  HAGTCLGIVAKDGIVLAAEKRFINNLLDETVFSEKIYKINDDIACAVAGITADATVLINE 89

Query: 72  LERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITL-VIT 122
           +  + ++     Q P  + +    +                      +  DK     +  
Sbjct: 90  MRLIAQRYLLSYQEPMPVEQLVCHICDLQHGYTMYGGRRPFGVSMLFIGWDKRYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
                         IGS  + A S      + + + EE        A  +CV
Sbjct: 150 TDPSGNFLGWNATCIGSNSTAAGSILEQDYNPEATVEE--------ATKLCV 193


>gi|47201791|emb|CAF87365.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 82

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN 56
           TTI  V     VV+  D + + G  V      K+  +    
Sbjct: 41 GTTIAGVVFKDGVVLGADTRATSGDVVADKMCAKIHHIAPNI 82


>gi|212529064|ref|XP_002144689.1| proteasome component Pre9, putative [Penicillium marneffei ATCC
           18224]
 gi|210074087|gb|EEA28174.1| proteasome component Pre9, putative [Penicillium marneffei ATCC
           18224]
          Length = 250

 Score = 54.6 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQQYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +     +   +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNAAAQSLLKQDYKEECDLKEACALAVKV 195


>gi|70991873|ref|XP_750785.1| proteasome component Pre9 [Aspergillus fumigatus Af293]
 gi|119470082|ref|XP_001258013.1| proteasome component Pre9, putative [Neosartorya fischeri NRRL 181]
 gi|66848418|gb|EAL88747.1| proteasome component Pre9, putative [Aspergillus fumigatus Af293]
 gi|119406165|gb|EAW16116.1| proteasome component Pre9, putative [Neosartorya fischeri NRRL 181]
 gi|159124347|gb|EDP49465.1| proteasome component Pre9, putative [Aspergillus fumigatus A1163]
          Length = 255

 Score = 54.2 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAEKKVTSKLLEQDTSAEKLYTLNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYGEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACAMAVKV 195


>gi|312068331|ref|XP_003137164.1| proteasome subunit alpha type 7-1 [Loa loa]
 gi|307767668|gb|EFO26902.1| proteasome subunit alpha type 7-1 [Loa loa]
          Length = 259

 Score = 54.2 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VVI  + + S+         RK+  + +  ++A FAG SADA  L++
Sbjct: 29  KGSTAVGVRGKNCVVIGVEKK-SIPTLQDDRTIRKIHSIDEHVMLA-FAGLSADARVLVD 86

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + Y   L         +  +A   +            +              + 
Sbjct: 87  RARIECQSYKLTLEDPVTVGYIARFIANTKQRFTQSPGRRPFGISMLIGGFDFDGTPRLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAM 166
                    E    + G G            + + +A+E     +  KA+
Sbjct: 147 KTEPSGAYYEYSANSTGRGEKPVREYLEEHYNDETAADEASVLKLVVKAL 196


>gi|298714366|emb|CBJ27423.1| proteasome subunit alpha [Ectocarpus siliculosus]
          Length = 239

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 56/171 (32%), Gaps = 20/171 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAVGIQTKEGVVLAVEKRLTS-PLLEPSSVEKIMEVDSHIG-AAMSGLIADARTLVDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWR-------------MDKYLRNLEAMILIA--DKTITL 119
              + + +           A                      R     +L+A  D     
Sbjct: 92  ARVEAQNHRFTYDEPMRVEALTQAVCDLALSFGEGGGSKTMSRPFGVALLMAGFDDRGAQ 151

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
           +       +       AIGSG   A S  +   S   +   AE +A   + 
Sbjct: 152 LFFSDPSGMFVRYKCKAIGSGSEGAQSTLQEGYSDSLTLAEAEALAVSTLK 202


>gi|209737130|gb|ACI69434.1| Proteasome subunit alpha type-7 [Salmo salar]
 gi|303660261|gb|ADM15990.1| Proteasome subunit alpha type-7 [Salmo salar]
          Length = 242

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 51/169 (30%), Gaps = 18/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + ++ +       RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKNIVVLGVEKK-TVAKLQEDRTVRKICSLDDN-VFMAFAGLTADARIIVN 85

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKT-ITLVI 121
           R   + + +   +   +        +    +              ++I+  D      + 
Sbjct: 86  RARVECQSHRLTVEDPATVEYITRYISSIKQRYTQSNGRRPFGISSLIVGFDFDGTPHLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAM 166
                         AIG                         ++A +A+
Sbjct: 146 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYKEDMESDTDTIKLAIRAL 194


>gi|45184835|ref|NP_982553.1| AAR012Cp [Ashbya gossypii ATCC 10895]
 gi|44980444|gb|AAS50377.1| AAR012Cp [Ashbya gossypii ATCC 10895]
          Length = 251

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 56/172 (32%), Gaps = 20/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + ++ +  VV+  + + +L     +    K+ R+    I++ FAG +AD+  L+E
Sbjct: 29  RGTCTVGIKGEDCVVLGCERRSTLKLQDPRITPSKISRIDNHLILS-FAGLNADSRILIE 87

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   L               + + +     +R      L+A          +
Sbjct: 88  KARVEAQSHRLTLEDPVTVEYMTRYIAGVQQRYTQSGGVRPFGVSTLVAGFDPRDARPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAM 166
                  +       AIG              S      ++    ++  K++
Sbjct: 148 YQTEPSGIYSAWAAQAIGRNSKTVREFLEKNYSKHTPPASEQDCVKLTVKSL 199


>gi|73973414|ref|XP_867775.1| PREDICTED: similar to Proteasome subunit beta type 3 (Proteasome
           theta chain) (Proteasome chain 13) (Proteasome component
           C10-II) isoform 2 [Canis familiaris]
          Length = 179

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 49/181 (27%), Gaps = 30/181 (16%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +  +G  V+A                 ++  +G    I G AG + D   + + L+ +L 
Sbjct: 4   MSYNGGAVMAF----------------QIFPMGDRLYI-GLAGLATDVQAVAQCLKFRLN 46

Query: 81  QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---------ITLVITGMG-DVLEP 130
            Y  +  +          +   L          +              + +         
Sbjct: 47  LYELKEGQQIKPYTLMSMVANLLYEKRFGPYYTEPVITGLDPKTFKPFICSLDLIGCPMV 106

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKV 187
            +  +  G+          +L       E +     +AM  A D    +   +++  ++ 
Sbjct: 107 TDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFENISQAMLNAVDRDAVSGMGVIVHIIEK 166

Query: 188 G 188
            
Sbjct: 167 D 167


>gi|325185828|emb|CCA20334.1| threonine protease family T01A putative [Albugo laibachii Nc14]
          Length = 239

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 15/164 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA-GSSADAFTLLE 73
             T L +R    VVIA D ++    T++   +   +             G   D   L+ 
Sbjct: 36  GKTSLGIRSKNGVVIATDKKL---PTILVDESTNNKIALLSECAGIIYSGLGPDYRVLVR 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
           +  KK + Y  +         L+R    + +++     +R     IL A  D     +  
Sbjct: 93  KARKKAQTYYQKFKEHAPASILVRELATIMQEFTQSGGVRPFGVSILFAGYDDDGPQLYQ 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG G   A +      +     E+    A+
Sbjct: 153 IDPSGSYFGWKATAIGRGAVSAKTFLEKRYNDDLEIEDAIHTAL 196


>gi|15789479|ref|NP_279303.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
 gi|169235195|ref|YP_001688395.1| proteasome subunit alpha [Halobacterium salinarum R1]
 gi|12644553|sp|P57697|PSA_HALSA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|229598014|sp|B0R2T2|PSA_HALS3 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|10579815|gb|AAG18783.1| proteasome, subunit beta [Halobacterium sp. NRC-1]
 gi|167726261|emb|CAP13042.1| proteasome alpha subunit [Halobacterium salinarum R1]
          Length = 253

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 62/189 (32%), Gaps = 17/189 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR    VV+  D Q +    +  ++  K+ ++    + A  AG  ADA  L++
Sbjct: 35  RGTASIGVRTPEGVVLVVDKQ-TRSPLLEGSSVEKLHKIDDH-VGAASAGHVADARQLVD 92

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKT--ITLVIT 122
              ++ +              L +S  +  + +      R     +LIA        +  
Sbjct: 93  FARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEPRLFE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHN 179
                   E   +AIGS                 S +   ++A +A++   +    +   
Sbjct: 153 TDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNEGRE-DALSGDG 211

Query: 180 IVLETLKVG 188
           + +  +   
Sbjct: 212 VGVGIVDAD 220


>gi|68467871|ref|XP_722094.1| hypothetical protein CaO19.11508 [Candida albicans SC5314]
 gi|68468188|ref|XP_721933.1| hypothetical protein CaO19.4025 [Candida albicans SC5314]
 gi|46443876|gb|EAL03155.1| hypothetical protein CaO19.4025 [Candida albicans SC5314]
 gi|46444042|gb|EAL03320.1| hypothetical protein CaO19.11508 [Candida albicans SC5314]
 gi|238882904|gb|EEQ46542.1| proteasome component C11 [Candida albicans WO-1]
          Length = 196

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 13/155 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL ++     +IA     + G +++K    K R L   N+IA + G + D     E ++ 
Sbjct: 4   ILGIKVSDGTLIATSKAATRGISILKDTDDKTRHLNAHNLIA-YTGEAGDTVQFAEYVQA 62

Query: 78  KLEQY-PNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMG 125
            ++ Y   +        A                  Y  N         K    +     
Sbjct: 63  NIQLYSMRENDIELSPKATASFVRNQLASSLRSRKPYQVNCLIGGYDVKKNEPSLNWIDY 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              + E    A G    Y  S          + E+
Sbjct: 123 LGTQVELPYGAHGYAAFYTTSLLDKHYRKDMTVED 157


>gi|295987109|gb|ADG64974.1| hypothetical protein [Drosophila pseudoobscura]
          Length = 249

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+A + + S+ +  +    RK+  L +  I+A F+G +ADA  L+ 
Sbjct: 30  KGSTAVGVRGGSCVVLAVEKK-SVPKLQVDRTVRKICLLDQHIIMA-FSGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   ++ + +      R      LI          + 
Sbjct: 88  RAQVECQTHRLNVEDQVTVEYITRYIAQIKQKYTQSNGRRPFGISCLIGGFDGDGTAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G   +                T+ SA ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAATVKEFFEKNYREEDVITEQSAVKLAVRAL 197


>gi|303310070|ref|XP_003065048.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240104707|gb|EER22903.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320033239|gb|EFW15188.1| proteasome component PUP2 [Coccidioides posadasii str. Silveira]
          Length = 245

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 50/172 (29%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + +V+    +  ++  K+  + +    A  G    +       
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCAMSGLQADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDK------------YLRNLEAMILIA--DKTIT 118
               +  E +  + LR          +                R     +LIA  D+   
Sbjct: 93  RVESQNHEFHYKEPLRVESCTQAICDLALRFGEGADGEESVMSRPFGVALLIAGYDEDGP 152

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
            +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 153 QLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|326476730|gb|EGE00740.1| proteasome subunit alpha [Trichophyton tonsurans CBS 112818]
          Length = 245

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + +V+    +  ++  K+  + +    A  G    +       
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDQHIGCAMSGLQADARSMVEHA 92

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDK------------YLRNLEAMILIA--DKTIT 118
               +    + ++ LR          +                R     +LIA  D+   
Sbjct: 93  RVETQNHRFHYSEPLRVESCTQAICDLALRFGEGADGEESIMSRPFGVALLIAGYDEDSP 152

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
            +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 153 QLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|195429653|ref|XP_002062872.1| GK19681 [Drosophila willistoni]
 gi|194158957|gb|EDW73858.1| GK19681 [Drosophila willistoni]
          Length = 255

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 17/170 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R D  +++  + ++  G    + + RK+R L    +I  FAG +ADA  +  
Sbjct: 30  KGSTAVGLRTDDCILLGVERKM-PGDLQEERSIRKIRLLDDH-VIMTFAGLTADARIVCN 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
           R + + + +     R            EL + +      R      LI    D     + 
Sbjct: 88  RAQVEAQSHRLNFERPVSVDYMSRYVAELQQKYTQSNGCRPFGISCLIGGFDDNGKPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSI 168
                 +  E    A G  G                    E   ++ +  
Sbjct: 148 QTEPSGICYEWIAAATGRYGQTVRGFMEKHSDGMGKSLDEETAIKEVIRT 197


>gi|307106430|gb|EFN54676.1| hypothetical protein CHLNCDRAFT_24644 [Chlorella variabilis]
          Length = 247

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 59/195 (30%), Gaps = 19/195 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLG----QTVMKANARKVRRLGK-GNIIAGFAGSSADA 68
           +A + + +     VV+A + +++      Q V     +  R        +AG    +   
Sbjct: 30  NAGSCVGILAKDGVVLAAEKRITSKLLDTQAVGVRREKMYRLDDHIACAVAGITADANIL 89

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELA-------KDWRMDKYLRNLEAMILIADKTI---T 118
                 L+ +   +  Q      +L        + +     LR     +L A        
Sbjct: 90  VNTCR-LQAQRHLFTYQEPMPVDQLVRGLCDTKQGYTQYGGLRPFGVSLLYAGWDKQRGF 148

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVY 175
            +               AIG+    A +  +     + S EE   +  K +S   D    
Sbjct: 149 QLYQSDPSGNYGGWKATAIGANHQAATNVLQGDYKDELSLEEATKLVIKVLSKTMDSTTL 208

Query: 176 TNHNIVLETLKVGDE 190
           +   + L TL   DE
Sbjct: 209 SPDKVELITLSRDDE 223


>gi|62088520|dbj|BAD92707.1| proteasome beta 2 subunit variant [Homo sapiens]
          Length = 249

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 37  IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 95

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 96  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 155

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 156 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 197


>gi|121715648|ref|XP_001275433.1| proteasome component Pup2, putative [Aspergillus clavatus NRRL 1]
 gi|119403590|gb|EAW14007.1| proteasome component Pup2, putative [Aspergillus clavatus NRRL 1]
          Length = 250

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +L+E 
Sbjct: 38  GSTAIGVATSEGVILGVEKRVTS-TLLEASSVEKIVEIDQHIGCA-MSGLQADARSLVEH 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 96  ARVECQNHAFHYAEPLRVESTTQAICDLALRFGETGDDDESVMSRPFGVALLIAGYDEDG 155

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 156 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 208


>gi|302690654|ref|XP_003035006.1| hypothetical protein SCHCODRAFT_232365 [Schizophyllum commune H4-8]
 gi|300108702|gb|EFJ00104.1| hypothetical protein SCHCODRAFT_232365 [Schizophyllum commune H4-8]
          Length = 267

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 15/163 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR   VVV+  + + S+ Q       RKV  L     +A FAG +AD   L++
Sbjct: 30  KGTCAVGVRGKDVVVLGVEKK-SVLQLQDPRTVRKVVMLDDHVCLA-FAGLTADGRILID 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD-------KTITLV 120
           +   + + +   +            +A   +       +    +           T   +
Sbjct: 88  KARIECQSHRLTVEDPVTIEYITRHIAGIQQRYTQSGGVRPFGISTLIVGFDPHDTRPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                  +       AIG                  S EE  +
Sbjct: 148 YQTEPSGIYSAWKANAIGRSSKTVREFLEKNHKDDMSREESIK 190


>gi|254571133|ref|XP_002492676.1| Alpha 4 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|238032474|emb|CAY70497.1| Alpha 4 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|328353317|emb|CCA39715.1| 20S proteasome subunit alpha 4 [Pichia pastoris CBS 7435]
          Length = 253

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 48/152 (31%), Gaps = 14/152 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   VVV+  + + +L     +    K+  + K  ++A FAG +ADA  L++
Sbjct: 29  RGTCAIGVKGKDVVVLGAERRTTLKLQDPRVTPSKINNVDKHVLLA-FAGLNADARILID 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   L            +A   +       +    +         +  +  +
Sbjct: 88  KARVEAQSHRLNLEDPVSIEYLTKYVAGVQQRYTQSGGVRPFGISTLIAGFDGNDNVPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALM 152
                  +      +AIG              
Sbjct: 148 YQTEPSGIYSAWKAVAIGRSSKTVNEFLEKNY 179


>gi|154298453|ref|XP_001549649.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|150858007|gb|EDN33199.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 211

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPQREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 195


>gi|301122141|ref|XP_002908797.1| proteasome subunit alpha, putative [Phytophthora infestans T30-4]
 gi|23394356|gb|AAN31468.1| proteasome subunit [Phytophthora infestans]
 gi|262099559|gb|EEY57611.1| proteasome subunit alpha, putative [Phytophthora infestans T30-4]
          Length = 250

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 44/158 (27%), Gaps = 11/158 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     +VIA + +           + K  +L    I   AG    +      
Sbjct: 30  NAGSAVGILAKDGIVIAAEKKTVSKLLTPSKTSEKTIKLDDHLICAVAGLTADANILVNY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++ E          QL+++     + +      R      L A         +  
Sbjct: 90  ARLSAQRYELAYQEKEPCEQLVQTLCNYKQAYTQFGGQRPFGVSFLYAGWDRHHGFQLYH 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                        AIG+    A S  ++      + EE
Sbjct: 150 SDPSGNYGGWKATAIGANNRAAKSMLKSDYEEGMTVEE 187


>gi|19173566|ref|NP_597369.1| 26S PROTEASOME BETA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
 gi|74664206|sp|Q8SS01|PSB4_ENCCU RecName: Full=Probable proteasome subunit beta type-4; AltName:
           Full=26S proteasome beta-type subunit PRE4; AltName:
           Full=Multicatalytic endopeptidase complex subunit PRE4
 gi|19170772|emb|CAD26546.1| 26S PROTEASOME BETA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
          Length = 235

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 44/114 (38%), Gaps = 5/114 (4%)

Query: 4   MGDKHYAVKMH----ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
           M     A KM      TT+++ R    +++  D + S G+    +  +++ ++G   ++ 
Sbjct: 1   MEHFGGAPKMRDFVTGTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLL- 59

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA 113
           G +G  +D   L++ L    ++   ++            +      +  + L  
Sbjct: 60  GMSGEISDMQYLVKTLTILTQEDNRRIDPKGYHKMIQRILYSARSKISPLNLSV 113


>gi|330841264|ref|XP_003292621.1| proteasome subunit alpha type 4 [Dictyostelium purpureum]
 gi|325077121|gb|EGC30855.1| proteasome subunit alpha type 4 [Dictyostelium purpureum]
          Length = 249

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 21/189 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA   + +     +V+A + + +           +       +++   AG ++DA  L+ 
Sbjct: 30  HAGATVGILAKDGIVLAAEKKTTAKLLDQSTTISEKMFKIDEHVVCAVAGITSDANILIN 89

Query: 74  RLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
                 ++Y  Q               +  + +     LR      L A         + 
Sbjct: 90  YARLSSQRYYYQYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDRHYGFQLY 149

Query: 122 TGMGDVLEPENGVMAIGS-GGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTN 177
                         +IG      A S  R+      S +E   +A K ++   D      
Sbjct: 150 QSDPSGNFAGWKATSIGGENSPVAQSVLRSNYKPDISLKEALTLALKVLTKTMDR----- 204

Query: 178 HNIVLETLK 186
            NI  + L+
Sbjct: 205 SNINSDKLE 213


>gi|226489757|emb|CAX75029.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
           japonicum]
          Length = 240

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 47/172 (27%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +           + K+ ++        AG    +      
Sbjct: 30  HAGTCLGIVAKDGIVLAAEKRFINNLLDETVFSEKIYKINDDIACAVAGITADATVLINE 89

Query: 72  LERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITL-VIT 122
           +  + ++     Q P  + +    +                      +  DK     +  
Sbjct: 90  MRLIAQRYLLSYQEPMPVEQLVCHICDLQHGYTMYGGRRPFGVSMLFIGWDKRYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
                         IGS  + A S      + + + EE        A  +CV
Sbjct: 150 TDPSGNFLGWNATCIGSNSTAAGSILEQDYNPEATVEE--------ATKLCV 193


>gi|295987107|gb|ADG64973.1| hypothetical protein [Drosophila pseudoobscura]
 gi|295987113|gb|ADG64976.1| hypothetical protein [Drosophila pseudoobscura]
 gi|295987115|gb|ADG64977.1| hypothetical protein [Drosophila pseudoobscura]
 gi|295987119|gb|ADG64979.1| hypothetical protein [Drosophila pseudoobscura]
          Length = 249

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+A + + S+ +  +    RK+  L +  I+A F+G +ADA  L+ 
Sbjct: 30  KGSTAVGVRGGSCVVLAVEKK-SVPKLQVDRTVRKICLLDQHIIMA-FSGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   ++ + +      R      LI          + 
Sbjct: 88  RAQVECQTHRLNVEDQVTVEYITRYIAQIKQKYTQSNGRRPFGISCLIGGFDGDGSAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G   +                T+ SA ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAATVKEFFEKNYRDEDVITEQSAVKLAVRAL 197


>gi|195430738|ref|XP_002063405.1| GK21413 [Drosophila willistoni]
 gi|194159490|gb|EDW74391.1| GK21413 [Drosophila willistoni]
          Length = 245

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 54/175 (30%), Gaps = 24/175 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    V      K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGISTSEGVVLAVEKRITSSLMVPS-TVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK-----------------YLRNLEAMILIADKTI 117
              + + +           +    +                     R     IL A    
Sbjct: 92  ARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSSDGDGGAAAMSRPFGVAILFAGVED 151

Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
               +           +   AIGSG   A    +   + + S   A ++A   + 
Sbjct: 152 GKPQLWHMDPSGTYVRHSAKAIGSGCEGAQQNLKDKYTPEISLSDAIDLALDTLK 206


>gi|116488182|gb|ABJ98673.1| low molecular weight polypeptide LMP7 [Scophthalmus maximus]
          Length = 101

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKAN 45
           H TT L  +    V++A D + S G  +   +
Sbjct: 70  HGTTTLAFKFKHGVIVAVDSRASAGSYLASND 101


>gi|126134007|ref|XP_001383528.1| hypothetical protein PICST_82713 [Scheffersomyces stipitis CBS
           6054]
 gi|126095677|gb|ABN65499.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 250

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 62/195 (31%), Gaps = 24/195 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + ++    VV+A + + +        N +         I   ++G   D   L++R
Sbjct: 31  GVTTIGIKSANGVVLATERKANSPLIKSDTNVKVELITPD--IGMTYSGMGPDFRVLVDR 88

Query: 75  --------LEKKLEQYP--NQLLRSSVELAKDWRMDKYLRNLEAMILIAD----KTITLV 120
                    ++   +YP    L++   ++ ++      +R     +L+           +
Sbjct: 89  ARKLAHTNYKRIYNEYPPVRILVQEIAKVMQESTQSGGIRPFGVSLLVGGYDQHSEQFQL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA--ADICVY 175
                          AIG   + A +      +     E+   +A  A+  +   ++   
Sbjct: 149 YQVDPSGSYFPWKATAIGKTSNSAKTFLEKRWNEDLELEDAIHVALLALKESVDGEL--- 205

Query: 176 TNHNIVLETLKVGDE 190
           T  N+ +  +    E
Sbjct: 206 TGENLDIAIISDAQE 220


>gi|145244710|ref|XP_001394650.1| proteasome subunit alpha type-4 [Aspergillus niger CBS 513.88]
 gi|134079340|emb|CAK96969.1| unnamed protein product [Aspergillus niger]
          Length = 255

 Score = 54.2 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAEKKVTSKLLEQDTSAEKLYTLNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACAMAVKV 195


>gi|327298890|ref|XP_003234138.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
 gi|326463032|gb|EGD88485.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
          Length = 245

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDQHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVETQNHRFHYSEPLRVESCTQAICDLALRFGEGADGEESIMSRPFGVALLIAGCDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|320590076|gb|EFX02521.1| proteasome component [Grosmannia clavigera kw1407]
          Length = 251

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNTDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPQRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        + G+  + A S  +       + +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSAGANNASAQSLLKQDYKEDCTLKEACGMAVKV 195


>gi|302890063|ref|XP_003043916.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256724835|gb|EEU38203.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 251

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPRRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        + G+  + A S  +       + +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSAGANNASAQSLLKQDYKEDCTLKEACGMAVKV 195


>gi|50308239|ref|XP_454120.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643255|emb|CAG99207.1| KLLA0E03917p [Kluyveromyces lactis]
          Length = 249

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 16/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T + +  +  +V+A + +V+        ++ K+ +L     +A  AG +ADA  L+ 
Sbjct: 31  HAGTAIGIMTEQGIVLAAERKVTSKLLEQDTSSEKLYKLNDNITVA-VAGLTADAEILIN 89

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
               + + Y            L+R   +L + +     LR      + A   D+    + 
Sbjct: 90  TARVQAQSYLKTYNEEIPVEMLVRRLSDLKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLY 149

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNH 178
           T            +++G+    A +  +       +   A E+A K +S   D  V T+ 
Sbjct: 150 TSNPSGNYSGWKAISVGANTQAAQTLLQMDYKDDITLDGAIELALKTLSKTTDSSVLTHE 209

Query: 179 NIVLETLKVGDE 190
            +   T+    E
Sbjct: 210 RLEFATISKDAE 221


>gi|46121975|ref|XP_385541.1| hypothetical protein FG05365.1 [Gibberella zeae PH-1]
          Length = 251

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPRRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        + G+  + A S  +       + +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSAGANNASAQSLLKQDYKEDCTLKEACGMAVKV 195


>gi|238501678|ref|XP_002382073.1| proteasome component Pre9, putative [Aspergillus flavus NRRL3357]
 gi|220692310|gb|EED48657.1| proteasome component Pre9, putative [Aspergillus flavus NRRL3357]
          Length = 255

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAEKKVTSKLLEQDTSAEKLYTLNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYDEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACAMAVKV 195


>gi|316969251|gb|EFV53379.1| proteasome subunit alpha type-7 [Trichinella spiralis]
          Length = 445

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 19/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +  + ++    VVIA + ++           RK+ ++    I   FAG +ADA  L+ 
Sbjct: 29  KGSVAVGIKGKDCVVIAAEKKLVAKLQ-DDRTIRKINKVDHH-IAMTFAGLNADARILVN 86

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
               + + +   +               + + +      R      +I          + 
Sbjct: 87  MARLECQSWNLSMSVPVTVEYLARYIANVKQKYTQSNGRRPFGVSAIIGGFDSDGTAHLY 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARKAMS 167
                    E      G       S        +      S  ++A +A+ 
Sbjct: 147 QTEPSGTYYEWNANCTGRNSHTVRSFLEKRYCPEAVEDVKSCVKLALRALY 197


>gi|331226128|ref|XP_003325734.1| proteasome subunit alpha type-3 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309304724|gb|EFP81315.1| proteasome subunit alpha type-3 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 251

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 59/167 (35%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    VV+A +  V     V  +N R++R +     +A  AG  AD   L  
Sbjct: 33  NSGTVIGLKCKDGVVLAVEKLVQSKLLVPGSN-RRLRTVDLHIGLAT-AGLLADGRQLGH 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG-------MGD 126
           R   +   Y               RM ++ +       +    I+ +I G          
Sbjct: 91  RATAEAASYKQNYNDPIPINKLADRMGQFCQAYTLYGSVRPFGISALIAGLDKAGSPDLF 150

Query: 127 VLEPENGVM-----AIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            LEP          AIG G + A +    L   + SA E    A  I
Sbjct: 151 CLEPSGVFWGYRGCAIGKGRTLARTEIEKLKLEELSAREAVEHAARI 197


>gi|195086146|ref|XP_001997426.1| GH22171 [Drosophila grimshawi]
 gi|193906293|gb|EDW05160.1| GH22171 [Drosophila grimshawi]
          Length = 222

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V++A D   +     MK +  K+ RL + +++A   G   D     + + 
Sbjct: 3   TILGIKGSNFVMLACDTMQAKSVIFMKDDQSKIHRLSEFSMLAA-VGDGGDTLQFTDYVA 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADK--TITLVITGMGD 126
           K L+ Y                  K L        R   +M++        + +      
Sbjct: 62  KHLQLYRISNGYHLSPRGAAHYTRKNLADYIRTNTRYQVSMLMAGYDAIEGSDLHYIDSY 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G G  +  S  +       S  E
Sbjct: 122 GASMSINHAGHGLGSLFCGSIFQRYWREDLSQAE 155


>gi|189237685|ref|XP_969117.2| PREDICTED: similar to proteasome beta-subunit [Tribolium castaneum]
 gi|270007836|gb|EFA04284.1| hypothetical protein TcasGA2_TC014574 [Tribolium castaneum]
          Length = 249

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +   +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGAKAVVLGVEKK-SVAKLQEERTVRKICLLDDH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +               L + +      R      LI          + 
Sbjct: 88  RAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLIGGFDYDGKPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAM 166
                 +  E    A G              + +  AEE     +A +A+
Sbjct: 148 QTEPSGIYYEWKANATGRSAKTVREFLEKYYTPEEVAEERGTVKLAIRAL 197


>gi|299747958|ref|XP_001837364.2| proteasome subunit alpha type-3 [Coprinopsis cinerea okayama7#130]
 gi|298407752|gb|EAU84280.2| proteasome subunit alpha type-3 [Coprinopsis cinerea okayama7#130]
          Length = 247

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 57/172 (33%), Gaps = 16/172 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + ++    V++A +  V     V  AN R+++ + +   +A     +        
Sbjct: 33  NSGTAIGIKVKDGVILAVEKLVHSKLLVPHAN-RRIQTIDRHIGLATAGLLADGRHIANR 91

Query: 74  RLEKKL---EQYPNQLLRS-------SVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
             ++     EQY +            +   A           +  ++   DK    +   
Sbjct: 92  ARDESANWREQYCSPTPIKNIADRLGAYTQAYTLYSSVRPFGISTILGGVDKDGPGLYVI 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
               +       A+G G   A +    L  ++ S  E    A+  AA I +Y
Sbjct: 152 EPSGVYYGYHGAAVGKGRQLAKTELEKLKLSELSMRE----AVYDAARI-IY 198


>gi|149912217|ref|ZP_01900796.1| ATP-dependent protease peptidase subunit [Moritella sp. PE36]
 gi|149804697|gb|EDM64748.1| ATP-dependent protease peptidase subunit [Moritella sp. PE36]
          Length = 41

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 27/39 (69%)

Query: 148 ARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
              L +T+  AEEIA+KA++IA +ICV+TN    +ET+ 
Sbjct: 2   MALLENTELDAEEIAKKALTIAGNICVFTNGFHTIETID 40


>gi|213402603|ref|XP_002172074.1| 20S proteasome component alpha 3 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000121|gb|EEB05781.1| 20S proteasome component alpha 3 [Schizosaccharomyces japonicus
           yFS275]
          Length = 247

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 16/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA   + +     +++A + +V+        ++ K+  L    I   AG    +      
Sbjct: 30  HAGVAMGIVSKDGIILAAEKKVTSKLLEQDTSSEKLYVLSDHMICAVAGLTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
             R+ ++  Q         Q++R   +L + +     LR      + A         +  
Sbjct: 90  ARRVGQQYLQTYNEDIPCEQMVRRVCDLKQGYTQHGGLRPFGVSFIYAGWDKVHGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYTN---H 178
                        +IG+  +   S  R         +     A+ I +  I   TN    
Sbjct: 150 SNPSGNYGSWQATSIGANNASVQSLMRQDYKDDMDMKAACDLAVKILSKSIDS-TNLSAE 208

Query: 179 NIVLETLKVGD 189
            I + T+   +
Sbjct: 209 KIEIATIVKNE 219


>gi|198476145|ref|XP_002132276.1| GA25292 [Drosophila pseudoobscura pseudoobscura]
 gi|198137565|gb|EDY69678.1| GA25292 [Drosophila pseudoobscura pseudoobscura]
 gi|295987097|gb|ADG64968.1| hypothetical protein [Drosophila pseudoobscura]
 gi|295987099|gb|ADG64969.1| hypothetical protein [Drosophila pseudoobscura]
 gi|295987101|gb|ADG64970.1| hypothetical protein [Drosophila pseudoobscura]
 gi|295987103|gb|ADG64971.1| hypothetical protein [Drosophila pseudoobscura]
 gi|295987105|gb|ADG64972.1| hypothetical protein [Drosophila pseudoobscura]
 gi|295987111|gb|ADG64975.1| hypothetical protein [Drosophila pseudoobscura]
 gi|295987117|gb|ADG64978.1| hypothetical protein [Drosophila pseudoobscura]
          Length = 249

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+A + + S+ +  +    RK+  L +  I+A F+G +ADA  L+ 
Sbjct: 30  KGSTAVGVRGGSCVVLAVEKK-SVPKLQVDRTVRKICLLDQHIIMA-FSGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   ++ + +      R      LI          + 
Sbjct: 88  RAQVECQTHRLNVEDQVTVEYITRYIAQIKQKYTQSNGRRPFGISCLIGGFDGDGTAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G   +                T+ SA ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAATVKEFFEKNYRDEDVITEQSAVKLAVRAL 197


>gi|315052036|ref|XP_003175392.1| proteasome component PUP2 [Arthroderma gypseum CBS 118893]
 gi|311340707|gb|EFQ99909.1| proteasome component PUP2 [Arthroderma gypseum CBS 118893]
 gi|326482315|gb|EGE06325.1| proteasome component PUP2 [Trichophyton equinum CBS 127.97]
          Length = 245

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + +V+    +  ++  K+  + +    A  G    +       
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDQHIGCAMSGLQADARSMVEHA 92

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDK------------YLRNLEAMILIA--DKTIT 118
               +    + ++ LR          +                R     +LIA  D+   
Sbjct: 93  RVETQNHRFHYSEPLRVESCTQAICDLALRFGEGADGEESIMSRPFGVALLIAGYDEDGP 152

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
            +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 153 QLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|170094152|ref|XP_001878297.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164646751|gb|EDR10996.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 268

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 15/163 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR   VVV+  + + S+ Q       RKV  L     +A FAG +AD   L++
Sbjct: 30  KGTCAVGVRGKDVVVLGVEKK-SVLQLQDPRTVRKVVMLDDHVCLA-FAGLTADGRVLID 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD-------KTITLV 120
           +   + + +   +            +A   +       +    +           T   +
Sbjct: 88  KARIECQSHRLTVEDPVTVEYITRHIAGIQQRYTQSGGVRPFGISTLIVGFDPHDTKPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                  +       AIG                  S EE  +
Sbjct: 148 YQTEPSGIYSAWKANAIGRSSKTVREFLEKNHKDDLSREESIK 190


>gi|312216268|emb|CBX96219.1| similar to proteasome subunit alpha type-4 [Leptosphaeria maculans]
          Length = 253

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPQRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                        ++G+  + A S  +     +   +E   +A K +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEECDLKEACGLAVKVL 196


>gi|169618195|ref|XP_001802511.1| hypothetical protein SNOG_12286 [Phaeosphaeria nodorum SN15]
 gi|160703572|gb|EAT80099.2| hypothetical protein SNOG_12286 [Phaeosphaeria nodorum SN15]
          Length = 259

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 36  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 95

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 96  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPQRQFQLYQ 155

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                        ++G+  + A S  +     +   +E   +A K +
Sbjct: 156 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEECDLKEACGLAVKVL 202


>gi|302668486|ref|XP_003025814.1| hypothetical protein TRV_00017 [Trichophyton verrucosum HKI 0517]
 gi|291189943|gb|EFE45203.1| hypothetical protein TRV_00017 [Trichophyton verrucosum HKI 0517]
          Length = 244

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 50/172 (29%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + +V+    +  ++  K+  + +    A  G    +       
Sbjct: 33  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDQHIGCAMSGLQADARSMVEHA 91

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDK------------YLRNLEAMILIA--DKTIT 118
               +    + ++ LR          +                R     +LIA  D+   
Sbjct: 92  RVETQNHRFHYSEPLRVESCTQAICDLALRFGEGADGEESIMSRPFGVALLIAGYDEDGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
            +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 QLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 203


>gi|194899688|ref|XP_001979390.1| GG15180 [Drosophila erecta]
 gi|190651093|gb|EDV48348.1| GG15180 [Drosophila erecta]
          Length = 251

 Score = 54.2 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   SL +       RK+  L     +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSLSKMQEDRTVRKITMLDNHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
           R + + + +     ++           +L + +      R      LI          + 
Sbjct: 88  RGQVECQSHRLNFEKAVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGMDANGSARLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA-----EEIARKAM 166
                 +  E    A G   +               A      ++A +A+
Sbjct: 148 HTEPSGIFYEYKASATGRSANTVREFFEKAYREDEVATKCGVIKLAMRAL 197


>gi|328769583|gb|EGF79626.1| hypothetical protein BATDEDRAFT_16747 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 271

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 60/189 (31%), Gaps = 17/189 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    +++  D   S G      + +++   G+  +I G +G  +D   +   
Sbjct: 55  GTSVIGIKYKDGIMMTADTLASYGSLAQIRDMKRMTSFGESTVI-GASGDMSDWQLIQHM 113

Query: 75  LEKKL----------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           ++ ++          + +P  +      +    R +        +I         +    
Sbjct: 114 VQDRVIAESAHDDGHQLHPEHIFEYLTRVMYGRRSNTNPLWNSLVIGGFRDGKRFLGYVD 173

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADICVYTNH 178
                  +  +A G G   A    R  +       T+  A +I    M +       + +
Sbjct: 174 MLGTTYHSSTIATGYGAYIAQPLLRKAVEGHEDELTEADAIKILDDCMRVLFYRDARSIN 233

Query: 179 NIVLETLKV 187
            I   T+  
Sbjct: 234 KIQRATINA 242


>gi|197632493|gb|ACH70970.1| proteasome subunit alpha type 7-2 [Salmo salar]
 gi|209734574|gb|ACI68156.1| Proteasome subunit alpha type-7 [Salmo salar]
          Length = 251

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDDH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      +     + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDNDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         +IG                   +T N A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANSIGRSAKTVREFLEKNYTDEAIATDNEAIKLAIKAL 197


>gi|312373129|gb|EFR20941.1| hypothetical protein AND_18263 [Anopheles darlingi]
          Length = 205

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 17/169 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L +R    V++A D   +    V+K +  K+  +    ++    G   D     E + 
Sbjct: 3   TLLGIRGPDFVMLAADCTHAHSIMVLKDDEEKISEVSD-TVLMATMGEPGDRVQFTEYIS 61

Query: 77  KKLEQYPNQLLRSSVELAKD---------WRMDKYLRNLEAMILIADK-TITLVITGMGD 126
           K +  Y  +        A           +   +   N+  ++   D+     +      
Sbjct: 62  KNILLYKMRNGYELGPKAAAHFTRRNLADYLRSRTPYNVNILLGGCDEVDGPQLHYIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    A G GG +  S          T+  A EI RK +   A+I
Sbjct: 122 ANSLPVKYAAHGYGGMFVASIFDRYHHDRITKKEAYEIFRKGV---AEI 167


>gi|194884398|ref|XP_001976249.1| GG20111 [Drosophila erecta]
 gi|195484013|ref|XP_002090526.1| GE13168 [Drosophila yakuba]
 gi|190659436|gb|EDV56649.1| GG20111 [Drosophila erecta]
 gi|194176627|gb|EDW90238.1| GE13168 [Drosophila yakuba]
          Length = 201

 Score = 54.2 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 17/169 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ ++    +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDNLLIST-VGESGDTEQFTEFVS 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIA------DKTITLVITGMGD 126
           K +  Y  +        A      K    YLR+     +              +      
Sbjct: 62  KNIALYKMRNGYDLSPHASAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNEGPELTFIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
                      G G  +A S          +   A ++ +K +   A+I
Sbjct: 122 ANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCI---AEI 167


>gi|296813891|ref|XP_002847283.1| proteasome subunit alpha type-4 [Arthroderma otae CBS 113480]
 gi|238842539|gb|EEQ32201.1| proteasome subunit alpha type-4 [Arthroderma otae CBS 113480]
          Length = 251

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 195


>gi|148704391|gb|EDL36338.1| mCG8712, isoform CRA_a [Mus musculus]
          Length = 182

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVY 175
            +     +         ++GSG  YA        S       A ++AR+A+  A     Y
Sbjct: 87  GLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAY 146

Query: 176 TNHNIVL 182
           +   + L
Sbjct: 147 SGGAVNL 153



 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G   +  ++   R  G    +   +  +       
Sbjct: 62  LHGTTTLAFKFLHGVIVAADSRATAGLYYV--DSEGNRISGTAFSVGSGSVYAYGVMDRG 119

Query: 73  ERLEKKLEQYPNQLLRSSVELA 94
              + K+E+  +   R+  +  
Sbjct: 120 YSYDLKVEEAYDLARRAIYQAT 141


>gi|300175301|emb|CBK20612.2| unnamed protein product [Blastocystis hominis]
          Length = 252

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 13/158 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              +++ V  D  +V+  + + +  Q       +K+ ++ +      F G SADA  L++
Sbjct: 29  KGYSVVAVVCDKCIVLGIEKKTTA-QLQDSRTVKKLLKIDENITFL-FTGLSADARKLVD 86

Query: 74  RLEKKLEQYPN--QLLRSSVELAKD---------WRMDKYLRNLEAMILIADKTITLVIT 122
               + + Y      + S   +A            R  +    +   I   D     + T
Sbjct: 87  IARVEAQSYRMSFDEIPSVKYIANYVGRQQQLYTQRGGRRPFGVCTFICGMDGEKGRLFT 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                +  E    A G   +   +   +      + EE
Sbjct: 147 TDPAGIVVEWKANASGRNEAALRTFLESHYKENMTEEE 184


>gi|15897639|ref|NP_342244.1| proteasome subunit alpha [Sulfolobus solfataricus P2]
 gi|284174965|ref|ZP_06388934.1| proteasome subunit alpha [Sulfolobus solfataricus 98/2]
 gi|12229942|sp|Q9UXC6|PSA_SULSO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|6015738|emb|CAB57565.1| proteasome alpha subunit (N-terminus) [Sulfolobus solfataricus P2]
 gi|13813906|gb|AAK41034.1| Proteasome subunit [Sulfolobus solfataricus P2]
 gi|261602408|gb|ACX92011.1| proteasome endopeptidase complex, alpha subunit [Sulfolobus
           solfataricus 98/2]
          Length = 241

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    VVIA + +      +   +  KV  +    +   FAG ++D   L++
Sbjct: 35  KGWTAIGIKSKSSVVIASEKR-KAQSLLDVDSIEKVFLIDDH-VGCSFAGLASDGRVLID 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
                  Q+            L +S  ++ + +     +R     ++IA  DK++  +  
Sbjct: 93  YARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLFM 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
                       +AIG G   A            + EE   +A KA+S 
Sbjct: 153 TEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKALSA 201


>gi|310795927|gb|EFQ31388.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 251

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  +       +AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYIVNDNMLAAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPRRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A+G+  + A S  +       + +E    A+ +
Sbjct: 150 SNPSGNYGGWKATAVGANRASAESLLKQDYKEDCTLKEACGMAVKV 195


>gi|327302430|ref|XP_003235907.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
 gi|326461249|gb|EGD86702.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
          Length = 251

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 195


>gi|302510154|ref|XP_003017037.1| hypothetical protein ARB_05331 [Arthroderma benhamiae CBS 112371]
 gi|302654562|ref|XP_003019085.1| hypothetical protein TRV_06910 [Trichophyton verrucosum HKI 0517]
 gi|315040688|ref|XP_003169721.1| proteasome subunit alpha type-4 [Arthroderma gypseum CBS 118893]
 gi|291180607|gb|EFE36392.1| hypothetical protein ARB_05331 [Arthroderma benhamiae CBS 112371]
 gi|291182782|gb|EFE38440.1| hypothetical protein TRV_06910 [Trichophyton verrucosum HKI 0517]
 gi|311345683|gb|EFR04886.1| proteasome subunit alpha type-4 [Arthroderma gypseum CBS 118893]
 gi|326475218|gb|EGD99227.1| proteasome subunit alpha [Trichophyton tonsurans CBS 112818]
 gi|326479704|gb|EGE03714.1| proteasome component Y13 [Trichophyton equinum CBS 127.97]
          Length = 251

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 195


>gi|295667089|ref|XP_002794094.1| proteasome component PUP2 [Paracoccidioides brasiliensis Pb01]
 gi|226286200|gb|EEH41766.1| proteasome component PUP2 [Paracoccidioides brasiliensis Pb01]
 gi|226291666|gb|EEH47094.1| proteasome subunit alpha type-5-A [Paracoccidioides brasiliensis
           Pb18]
          Length = 245

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVESQNHAFNYSEPLRVESCTQAICDLALRFGEGADGEESVMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       S   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQTEYHRSLSLAEAETLVLKTLK 204


>gi|225709636|gb|ACO10664.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
 gi|225710786|gb|ACO11239.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
          Length = 204

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 45/155 (29%), Gaps = 12/155 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +  +  V++A D Q      ++  +  +       +++    G S D     E + 
Sbjct: 3   TSIGIAFNDFVMVATD-QTCAHSILLMKDTCEKTYSLSNHLLMSAIGQSGDTTEFAEFMT 61

Query: 77  KKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK--TITLVITGMG 125
           K ++ Y  +                        +   ++  ++   DK      + +   
Sbjct: 62  KNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNPFHVNLLVAGFDKKSEQAELYSMDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                +      G GG ++            + EE
Sbjct: 122 LAGMVKTEHATHGYGGVFSSGILDRHYKPDMTVEE 156


>gi|115400489|ref|XP_001215833.1| proteasome component Y13 [Aspergillus terreus NIH2624]
 gi|114191499|gb|EAU33199.1| proteasome component Y13 [Aspergillus terreus NIH2624]
          Length = 255

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAEKKVTSKLLEQDTSAEKLYTLNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACAMAVKV 195


>gi|281201444|gb|EFA75654.1| proteasome subunit alpha type 4 [Polysphondylium pallidum PN500]
          Length = 250

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 21/189 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA   + +     +V+A + +          +  +       +++   AG ++DA  L+ 
Sbjct: 30  HAGATVGILAQDGIVLAAEKKTVAKLLDSSLSQSEKMFKIDDHVVCAVAGITSDANILIN 89

Query: 74  RLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
                 ++Y                  +  + +     LR      L A   I     + 
Sbjct: 90  YARLSSQRYYYNYQEPMPVEQLVSQICDTKQGYTQYGGLRPFGVSFLYAGWDIHHGFQLY 149

Query: 122 TGMGDVLEPENGVMAIGS-GGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTN 177
                         +IG      A S  R+      S   A E+A K ++   D      
Sbjct: 150 QSDPSGNFAGWKATSIGGENSQVAQSVLRSNYKPDLSLKEALELALKVLTKTMDR----- 204

Query: 178 HNIVLETLK 186
            NI  + L+
Sbjct: 205 SNINSDKLE 213


>gi|194893941|ref|XP_001977972.1| GG17945 [Drosophila erecta]
 gi|190649621|gb|EDV46899.1| GG17945 [Drosophila erecta]
          Length = 249

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEKK-SVAKLQEDRTVRKICMLDHH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T++ A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKVVREFFEKAYREEDVATEHGAVKLAIRAL 197


>gi|331233003|ref|XP_003329163.1| proteasome subunit alpha type-7 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309308153|gb|EFP84744.1| proteasome subunit alpha type-7 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 265

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 15/163 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR     ++  + + S+ Q       RKV  L     +A FAG +ADA  L++
Sbjct: 30  KGTCAVGVRGKSCAILGVEKK-SVLQLQDPRTVRKVAMLDDHVCLA-FAGLTADARILID 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   +            +A+  +       +    +        A+  I  +
Sbjct: 88  KARTECQSHRLTVEDPVTVEYITRHIAQIQQRYTQSGGVRPFGISCLIIGFDANDNIPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
            +     +       AIG              +   S EE  +
Sbjct: 148 YSTEPSGVFSSWKANAIGRSSKTVKEFLEKNWAEGLSTEESIK 190


>gi|256084130|ref|XP_002578285.1| proteasome subunit alpha 4 (T01 family) [Schistosoma mansoni]
 gi|238663652|emb|CAZ34523.1| proteasome subunit alpha 4 (T01 family) [Schistosoma mansoni]
          Length = 247

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 45/166 (27%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L V     +V+A + +           + K+ ++        AG    +      
Sbjct: 30  HAGTCLGVVAKDGIVLAAEKRFINNLLDETVFSEKIYKINDDIACAVAGITADATVLINE 89

Query: 72  LERLEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITL-VIT 122
           +  + ++     Q P  + +    +                      +  DK     +  
Sbjct: 90  MRLIAQRYLLSYQEPMPVEQLVCHICDLQHGYTMYGGRRPFGVSMLFIGWDKRYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         IGS  + A S      +   + EE  +  + +
Sbjct: 150 TDPSGNFLGWNATCIGSNSTAAGSILEQDYNADATVEEATKLCIKV 195


>gi|156840806|ref|XP_001643781.1| hypothetical protein Kpol_480p10 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114406|gb|EDO15923.1| hypothetical protein Kpol_480p10 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 259

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 71/191 (37%), Gaps = 16/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T + +     +V+A + +V+        +  K+ RL     +A  AG +ADA  L+ 
Sbjct: 31  HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKIYRLNDKITVA-VAGLTADAEILIN 89

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
                 ++Y            L+R   ++ + +     LR      + A   D+    + 
Sbjct: 90  TARVHAQEYLKTYNEEIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLY 149

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNH 178
           T            +++G+  S A +  +         + A E+A K +S   D    T  
Sbjct: 150 TSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDIKVDEAIELALKTLSKTTDSSALTYD 209

Query: 179 NIVLETLKVGD 189
            +   T+K G+
Sbjct: 210 RVEFATIKKGE 220


>gi|84997473|ref|XP_953458.1| proteasome subunit [Theileria annulata strain Ankara]
 gi|65304454|emb|CAI76833.1| proteasome subunit, putative [Theileria annulata]
          Length = 254

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 48/168 (28%), Gaps = 14/168 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERL 75
            + V  +  VV+  D  +S           K+ +L       +AG    +     + +  
Sbjct: 34  TVGVLCNSGVVLVADKPISSKLLDPGKINEKLYKLDSHIFCAVAGLTADANVLINMCKLY 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGD 126
            ++            Q +    +L + +     LR      L       L   +      
Sbjct: 94  AQRHRYSYGEPQSIEQHIIQICDLKQSYTQFGGLRPFGVSFLFGGWDENLGFQLYHTDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
                    AIG     A S  +       +   A ++A + ++ A D
Sbjct: 154 GNYSGWKATAIGMNSQSAQSILKQEWKEDLTLEQAIKLAIRVLTKAMD 201


>gi|195114510|ref|XP_002001810.1| GI17050 [Drosophila mojavensis]
 gi|193912385|gb|EDW11252.1| GI17050 [Drosophila mojavensis]
          Length = 206

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ ++    +I+   G+S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHANSVIVMKEDENKIHKVADNLLIST-VGASGDTEQFTEFIA 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIAD-KTITLVITGMGD 126
           K +  Y  +        +      K L           +   I   D      +      
Sbjct: 62  KNIVLYKMRNGYDLSPKSAAHFTRKNLAESLRSRTPYQVFMFIAGYDTTEGPELTFIDNL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G G  +  S        + + EE
Sbjct: 122 ASAQSLNYAGHGYGSMFCASIFDRYWHPKITQEE 155


>gi|257076107|ref|ZP_05570468.1| proteasome subunit alpha [Ferroplasma acidarmanus fer1]
          Length = 229

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 52/169 (30%), Gaps = 14/169 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T L ++    V++  + +    + V K +  K++ +            +     +  
Sbjct: 28  KGSTALGIKFKDGVLLLSEKKA-RSRLVEKNSLEKIQLVDDNVATVTSGLVADARVLIDF 86

Query: 74  -RLEKKLEQ-------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            R+  + E+           L++   +  + +     +R     I+ A  D     +   
Sbjct: 87  ARVGAQQEKVTYGSLTNIENLVKKVADQMQQYTQFGGVRPYGVSIIFAGTDTIGPRLFDC 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
                  E   +AIG+G                S E+   +   A+  A
Sbjct: 147 DPAGTINEYKSVAIGAGKDAVTDYIEKEYKDDMSLEDTIKLGVAALKSA 195


>gi|238600533|ref|XP_002395164.1| hypothetical protein MPER_04826 [Moniliophthora perniciosa FA553]
 gi|215465441|gb|EEB96094.1| hypothetical protein MPER_04826 [Moniliophthora perniciosa FA553]
          Length = 176

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 12/120 (10%)

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ILIADKTITLVITGMGDVLEPEN 132
           +E +     R +  +     + +YL   +        +   D T   + T        + 
Sbjct: 1   MEMHALTHGRKARVVTAMTMLKQYLFRYQGHVGAALVLGGVDATGPNLFTIHPHGSTDKL 60

Query: 133 GVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADI--CVYTNHNIVLETLKVG 188
             + +GSG   A++   +      +  A ++ + A+S  A I   + +  N+    +   
Sbjct: 61  PYVTMGSGSLAAMAVFESGWRAGDEQQALQLVKDAIS--AGIFNDLGSGSNVDACIITAN 118


>gi|194882257|ref|XP_001975229.1| GG20675 [Drosophila erecta]
 gi|190658416|gb|EDV55629.1| GG20675 [Drosophila erecta]
          Length = 244

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    ++ +   K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTPFGVVLAVEKRITS-PLMVSSTVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKT-- 116
              + + +           +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAG 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +           +G  AIGSG   A    +     + + ++    +++ 
Sbjct: 152 KPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQVYYHPEMTLDDAINLSLTT 203


>gi|169597561|ref|XP_001792204.1| hypothetical protein SNOG_01567 [Phaeosphaeria nodorum SN15]
 gi|160707546|gb|EAT91216.2| hypothetical protein SNOG_01567 [Phaeosphaeria nodorum SN15]
          Length = 256

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 45  GSTAIGVATGEGVILGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 102

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 103 ARVESQNHAFNYNEPLRVESCTQAICDLALRFGEGAEGEESIMSRPFGVALLIAGYDEDG 162

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 163 PSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHKSLTLPEAEVLVLKTLK 215


>gi|71029642|ref|XP_764464.1| proteasome subunit alpha type [Theileria parva strain Muguga]
 gi|68351418|gb|EAN32181.1| proteasome subunit alpha type, putative [Theileria parva]
          Length = 254

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 44/162 (27%), Gaps = 11/162 (6%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERL 75
            + V     VV+  D  +S           K+ +L       +AG    +     + +  
Sbjct: 34  TVGVLCSSGVVLVADKPISSKLLDPGKINEKLYKLDSHIFCAVAGLTADANVLINMCKLY 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGD 126
            ++            Q +    +L + +     LR      L       L   +      
Sbjct: 94  AQRHRYSYGEPQSIEQHIIQICDLKQSYTQFGGLRPFGVSFLFGGWDENLGFQLYHTDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                    AIG     A S  +       + E+  R A+ +
Sbjct: 154 GNYSGWKATAIGMNSQSAQSILKQEWKEDLTLEQAVRLAIRV 195


>gi|242764570|ref|XP_002340801.1| proteasome component Pre9, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218723997|gb|EED23414.1| proteasome component Pre9, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 250

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQQYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDQLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +     +   +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNAAAQSLLKQDYKEECDLKEACALAVKV 195


>gi|47230708|emb|CAF99901.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 573

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 59/191 (30%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L        AG    +      
Sbjct: 29  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNDDMACSVAGITSDANVLTNE 88

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 89  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 149 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLSSALALAVKVLNKTMDVSKLSAE 208

Query: 179 NIVLETLKVGD 189
            + + TL   D
Sbjct: 209 KVEIATLTRED 219


>gi|310792106|gb|EFQ27633.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 245

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD---------------KYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVESQSHSFNYNEPLRVESCTQAICDLALRFGEGAEGEETIMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       S   AE +  K + 
Sbjct: 152 PQLFHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLSITDAETLVLKTLK 204


>gi|301122971|ref|XP_002909212.1| proteasome subunit alpha type-7, threonine protease family T01A,
           putative [Phytophthora infestans T30-4]
 gi|262099974|gb|EEY58026.1| proteasome subunit alpha type-7, threonine protease family T01A,
           putative [Phytophthora infestans T30-4]
          Length = 246

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 14/166 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
              ++ VR    VV+A + + +          RK+ ++     IA FAG +ADA  L+ +
Sbjct: 27  GAVVVGVRGKAAVVLAVERKETAKLQ-DPRTVRKICKVDDHISIA-FAGLTADARVLVNK 84

Query: 75  LEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMIL------IADKTITLVIT 122
              + + Y   +  +      +  +A+  +       +    +        D+ +  +  
Sbjct: 85  ARLECQSYRLTVEDAPSVEYVARYVARVQQKYTQRGGVRPFGISMLIAGCNDQGVPQLYQ 144

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        A G   +              + EE    A+  
Sbjct: 145 TDPSGTFSAWKANATGRNSTNIREFLEKNYVENATEEEAVTLAIKA 190


>gi|19528159|gb|AAL90194.1| AT26889p [Drosophila melanogaster]
          Length = 252

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 17/167 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R +  +VI  + + S+G    +   RK+  L    ++  F+G +ADA  L+ 
Sbjct: 30  RGSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDH-VVMTFSGLTADARILVS 87

Query: 74  RLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +     +            +L +++      R      L+          + 
Sbjct: 88  RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +  E      G                  +   IA +A +I
Sbjct: 148 QTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILT---IADEAAAI 191


>gi|225715858|gb|ACO13775.1| Proteasome subunit alpha type-7 [Esox lucius]
          Length = 251

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDDH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +T N A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIATDNDAIKLAIKAL 197


>gi|171682782|ref|XP_001906334.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941350|emb|CAP67000.1| unnamed protein product [Podospora anserina S mat+]
          Length = 250

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPQRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        + G+  + A S  +       + EE    A+ +
Sbjct: 150 SNPSGNYGGWKATSSGANHASAQSLLKQDYKEDCTLEEACGMAVKV 195


>gi|154279090|ref|XP_001540358.1| proteasome component Pre1 [Ajellomyces capsulatus NAm1]
 gi|150412301|gb|EDN07688.1| proteasome component Pre1 [Ajellomyces capsulatus NAm1]
          Length = 203

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++KA+  K R L K  I+A F+G + D     E ++  
Sbjct: 5   LGITGKDFTLIAASKAAMRGATILKASDDKTRELSKHTIMA-FSGEAGDTVQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELAKD---------WRMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
           ++ Y  +        A               +    +  ++   D       +       
Sbjct: 64  VQLYSMRNEAELSPSAVASFVRGELARSLRSRRPYTVNLLLGGVDPITEKPSLYWLDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          + E+
Sbjct: 124 ALAPVPYAAHGYAQYYCLSILDKHHHPDITLEQ 156


>gi|17508493|ref|NP_492765.1| Proteasome Alpha Subunit family member (pas-5) [Caenorhabditis
           elegans]
 gi|12229918|sp|Q95008|PSA5_CAEEL RecName: Full=Proteasome subunit alpha type-5; Short=Proteasome
           subunit alpha 5
 gi|3876333|emb|CAB02097.1| C. elegans protein F25H2.9, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 248

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 58/169 (34%), Gaps = 17/169 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V++A + + +    V      K+ ++ +   +  FAG  AD+ TL+ER
Sbjct: 34  GSTSIGIKTSEGVLLAAEKRSTSKLMV-NDAIEKISKVDQHIGV-TFAGLIADSRTLVER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK-------------YLRNLEAMILIA--DKTITL 119
            + + + +     R          +                 R     +L A  D+    
Sbjct: 92  AQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLFAGVDQEGAK 151

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           +          +    +IG+    A    +       + +E  + A++I
Sbjct: 152 LFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAI 200


>gi|67522601|ref|XP_659361.1| hypothetical protein AN1757.2 [Aspergillus nidulans FGSC A4]
 gi|40744887|gb|EAA64043.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259487101|tpe|CBF85505.1| TPA: proteasome component Pre9, putative (AFU_orthologue;
           AFUA_6G08960) [Aspergillus nidulans FGSC A4]
          Length = 255

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAEKKVTSKLLEQDTSAEKLYTLNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLITYGEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDHLREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACAMAVKV 195


>gi|255726496|ref|XP_002548174.1| proteasome component Y13 [Candida tropicalis MYA-3404]
 gi|240134098|gb|EER33653.1| proteasome component Y13 [Candida tropicalis MYA-3404]
          Length = 251

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 17/186 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T + +     VV+A + +V+        +A K+  +    +I   AG +ADA  L+ 
Sbjct: 30  NAGTAIGILSSEGVVLACEKKVTSKLLDDDGSAEKLYII-NDQMICAVAGMTADASILVN 88

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
               + +QY            L+ S  ++ + +     LR      L A   D+    + 
Sbjct: 89  SARVRAQQYLKTYNEEIPCEMLINSVCDIKQGYTQHGGLRPFGVSFLYAGYDDRYQFQLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYTNHNI 180
           T             +IG+  S A +  +       + ++    A+ + +  +      NI
Sbjct: 149 TSNPSGNYSGWKATSIGANNSAAQTLLKKDYKDDMTLKDACELAIKVLSKTMDA---SNI 205

Query: 181 VLETLK 186
             E L+
Sbjct: 206 NSEKLE 211


>gi|258575131|ref|XP_002541747.1| proteasome subunit alpha type 4 [Uncinocarpus reesii 1704]
 gi|237902013|gb|EEP76414.1| proteasome subunit alpha type 4 [Uncinocarpus reesii 1704]
          Length = 251

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDSRGQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKDDCDLKEACGMAVKV 195


>gi|164426284|ref|XP_960720.2| proteasome component C11 [Neurospora crassa OR74A]
 gi|157071273|gb|EAA31484.2| proteasome component C11 [Neurospora crassa OR74A]
          Length = 240

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 42/150 (28%), Gaps = 12/150 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +      +IA       G T++KA+  K R L K   +  F+G + D     E  +  
Sbjct: 42  IGITGKDFTIIAASKAAMRGATILKASDDKTRSLNKHT-LMAFSGEAGDTVQFAEYTQAN 100

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
            + Y  +        A               +   N+  ++   D       +       
Sbjct: 101 AQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLLLGGVDPITHKPSLYWLDYLA 160

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS 157
              +    A G    Y LS          +
Sbjct: 161 SLAKVPYAAHGYAQYYCLSILDKHHHPDIT 190


>gi|159478278|ref|XP_001697231.1| 20S proteasome alpha subunit E [Chlamydomonas reinhardtii]
 gi|158274705|gb|EDP00486.1| 20S proteasome alpha subunit E [Chlamydomonas reinhardtii]
          Length = 241

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 24/189 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    +  ++  K+  + +    A  +G +ADA TL++ 
Sbjct: 34  GSTAIGICTKEGVVLAVEKRITS-PLLEPSSIEKIMEIDEHMACA-MSGLTADAKTLIDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM--------------DKYLRNLEAMILIA--DKTIT 118
                +Q+           +    +                  R     +LIA  D    
Sbjct: 92  ARADTQQHRFSYNEPMPIESTTQSLCDLALRFGEDSDEGGGMSRPFGVALLIAGWDDQGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNS---AEEIARKAMSIAADIC 173
            +          +    AIGSG   A S+ +         S   AE +A   +    +  
Sbjct: 152 ALYHTDPSGTYVKYSAKAIGSGSEGAQSSLQEAFKDKPDMSLAEAEVLALSTLKQVMEEK 211

Query: 174 VYTNHNIVL 182
           V T  N+ +
Sbjct: 212 V-TATNVDI 219


>gi|194766351|ref|XP_001965288.1| GF24340 [Drosophila ananassae]
 gi|190617898|gb|EDV33422.1| GF24340 [Drosophila ananassae]
          Length = 205

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 14/163 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ ++    +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHARSIVVMKDDQNKIHKVSNNLLISTI-GESGDTEQFTEFIS 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIA------DKTITLVITGMGD 126
           K +  Y  +        A      K    YLR+     +              +      
Sbjct: 62  KNIALYKMRNGYDLSPHAAAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNDGPELTFIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAM 166
                      G G  +A S          TQ+ A ++ +K +
Sbjct: 122 ASAKSVNYAGHGYGAIFASSIYDRYWHPKITQDEAYDVLKKCV 164


>gi|115384510|ref|XP_001208802.1| proteasome component PUP2 [Aspergillus terreus NIH2624]
 gi|114196494|gb|EAU38194.1| proteasome component PUP2 [Aspergillus terreus NIH2624]
          Length = 246

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA  L+E 
Sbjct: 34  GSTAIGVSTSEGVILGVEKRVTS-TLLEASSVEKIVEIDQHIGCA-MSGLQADARNLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQNHAFHYAEPLRVESCTQAICDLALRFGETGDDEESVMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|303276861|ref|XP_003057724.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460381|gb|EEH57675.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 238

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 20/175 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +R D  VV+A + ++S    +  ++  K+  +      A  +G +ADA +++E 
Sbjct: 34  GSTAIAIRTDHGVVLAVEKRMSS-PLMEPSSLDKIMEIDSHIACA-VSGLTADAQSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM------------DKYLRNLEAMILIAD---KTITL 119
              + + +           A    +            D   R     +L+A         
Sbjct: 92  GRVQAQNHYFTYNEPMPAQALTQALCDLGANFGTGEEDSMSRPFGVALLVAGYDEDEGYQ 151

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
           +          +    AIGSG   A +  +       +   AE +A   +    +
Sbjct: 152 LYHTDPSGTFLKYKAKAIGSGSEGAQTTLQEEYKDDFTLEQAETLALSTLKAVME 206


>gi|167043982|gb|ABZ08668.1| hypothetical protein ALOHA_HF4000APKG3K8ctg1g1 [uncultured marine
           crenarchaeote HF4000_APKG3K8]
          Length = 98

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 1/96 (1%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
           A+ M   T + +  +  VV A + +++ G  V+    +K   +    + A  AG  AD  
Sbjct: 3   AMYMPGATAVGITYNEGVVFASERRIAYGNFVVSKTTKKTFVITP-QVGAACAGLVADMQ 61

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN 105
            L  ++    +    ++ R          M   +  
Sbjct: 62  ILSLQVSALAKIRKMEIKREVPPNTIAKMMSNMMYE 97


>gi|169769230|ref|XP_001819085.1| proteasome subunit alpha type-4 [Aspergillus oryzae RIB40]
 gi|83766943|dbj|BAE57083.1| unnamed protein product [Aspergillus oryzae]
          Length = 255

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILVKDGIVLAAEKKVTSKLLEQDTSAEKLYTLNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYDEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACAMAVKV 195


>gi|19922898|ref|NP_611920.1| proteasome 28kD subunit 1B [Drosophila melanogaster]
 gi|12643242|sp|Q27575|PSA73_DROME RecName: Full=Proteasome subunit alpha type-7-1B; AltName:
           Full=Testis-specific alpha4-t2 proteasome subunit;
           AltName: Full=Testis-specific proteasome 28 kDa subunit
           1B
 gi|7291795|gb|AAF47215.1| proteasome 28kD subunit 1B [Drosophila melanogaster]
 gi|46254512|gb|AAS86229.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           melanogaster]
 gi|46254514|gb|AAS86230.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           melanogaster]
 gi|46254516|gb|AAS86231.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           melanogaster]
 gi|46254518|gb|AAS86232.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           melanogaster]
 gi|46254520|gb|AAS86233.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           melanogaster]
 gi|46254522|gb|AAS86234.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           melanogaster]
 gi|46254524|gb|AAS86235.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           melanogaster]
          Length = 252

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 17/167 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R +  +VI  + + S+G    +   RK+  L    ++  F+G +ADA  L+ 
Sbjct: 30  RGSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDH-VVMTFSGLTADARILVS 87

Query: 74  RLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +     +            +L +++      R      L+          + 
Sbjct: 88  RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +  E      G                  +   IA +A +I
Sbjct: 148 QTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILT---IADEAAAI 191


>gi|116196418|ref|XP_001224021.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88180720|gb|EAQ88188.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 245

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVILGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQSHAFNYNEQLRVESCTQAICDLALRFGESADGEESIMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A +  +           AE +  K + 
Sbjct: 152 PSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTIADAETLVLKTLK 204


>gi|39977139|ref|XP_369957.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145016108|gb|EDK00598.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 269

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 49/168 (29%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  +     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGADIVVLGCEKRSAMKLQDTRITPSKIGLIDTHVCLA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 89  KARLEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLVVGFDNGSKVPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  +       AIG                    E+  R A+  
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNYKEDMDREQTIRLAIKS 196


>gi|325116267|emb|CBZ51820.1| putative proteasome subunit alpha type 4, subunit [Neospora caninum
           Liverpool]
          Length = 252

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 44/152 (28%), Gaps = 11/152 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A++ L +     VV+A D  V+           K+ ++    +   AG    +    + 
Sbjct: 30  NASSTLGILAQDGVVLAADKMVTSKLLDQGRTKEKIYKVDDHVMCAVAGLTADANILISQ 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
              + ++     +      QL+    ++ + +     LR      L A         +  
Sbjct: 90  ARLIGQRYLYAYDEPQPIEQLVLQICDVKQSYTQFGGLRPFGVSFLFAGWDRHYGFQLYH 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST 154
                        AIG     A S  +     
Sbjct: 150 TDPSGNYSGWKATAIGVNSQSAQSILKQEWKE 181


>gi|225708460|gb|ACO10076.1| Proteasome subunit alpha type 7 [Osmerus mordax]
          Length = 251

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALTVGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +T N A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEEAIATDNDAIKLAIKAL 197


>gi|322706833|gb|EFY98413.1| proteasome component PUP2 [Metarhizium anisopliae ARSEF 23]
          Length = 245

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVILGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD---------------KYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQSHAFNYNEPLGVESCTQAICDLALRFGEGADGEETIMSRPFGVALLIAGFDEQG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A +  +           AE +  K + 
Sbjct: 152 PQLFHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTITDAETLVLKTLK 204


>gi|195122518|ref|XP_002005758.1| GI18902 [Drosophila mojavensis]
 gi|193910826|gb|EDW09693.1| GI18902 [Drosophila mojavensis]
          Length = 253

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 20/175 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R    +V+  + +      V    ARK+R+L    ++  FAG +ADA  LL 
Sbjct: 29  KGSTVVGLRTKDSIVLGVERKAVDVLQVE-RTARKIRKLDDHLVV-TFAGLTADARILLN 86

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +     R +          +L +++      R      LI          + 
Sbjct: 87  RAQSEAQSHRLNFERPATVEYITRYIAKLKQNYTQSNGRRPFGVSCLIGGFDADGKPRLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAAR----ALMSTQNSAEEI--ARKAMSIAA 170
                 +  E      G  G            A+ S+ + A  I    +A+  A 
Sbjct: 147 QTEPSGIYYEWSANTTGRLGKTMRDYLEVNAPAMSSSPDDAAAIKHVVRALHTAT 201


>gi|46123563|ref|XP_386335.1| hypothetical protein FG06159.1 [Gibberella zeae PH-1]
          Length = 243

 Score = 53.8 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 32  GSTAIGVATSEGVILGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 89

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD---------------KYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 90  ARVESQSHAFNYNEPLRVESCTQAICDLALRFGEGADGEETIMSRPFGVALLIAGFDEDG 149

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A +  +           AE +  K + 
Sbjct: 150 PQLFHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTLIDAETLVLKTLK 202


>gi|281338480|gb|EFB14064.1| hypothetical protein PANDA_002292 [Ailuropoda melanoleuca]
          Length = 176

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 10/156 (6%)

Query: 41  VMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW--- 97
           V+     K+  L +    A  +GS+ADA  +++    +LE +  +L    + LA      
Sbjct: 3   VVNRVFDKLSPLHQYIYCA-LSGSAADAQAMVDTATYQLELHGLELEEPPLVLAAANVVR 61

Query: 98  -RMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
               KY  +L A +++A  D+     + G    +         GSG +Y      A    
Sbjct: 62  NISYKYREDLSAHLMVAGWDQRGGGQVYGTLGGMLTRQPFAIGGSGSTYIYGYVDAAYKP 121

Query: 155 QNSAEEI---ARKAMSIAADICVYTNHNIVLETLKV 187
             S EE       A+++A +    +   I L T+  
Sbjct: 122 GMSPEECRSFTTNAITLAMNRDGSSGGVIYLVTITA 157


>gi|240277965|gb|EER41472.1| proteasome component Y13 [Ajellomyces capsulatus H143]
          Length = 264

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 195


>gi|159481799|ref|XP_001698962.1| 20S proteasome beta subunit D, type 2 [Chlamydomonas reinhardtii]
 gi|158273225|gb|EDO99016.1| 20S proteasome beta subunit D, type 2 [Chlamydomonas reinhardtii]
          Length = 193

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 46/161 (28%), Gaps = 12/161 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++  D   +     +K +  K+  +    +    AG + D     E +   
Sbjct: 5   VGIKGKDFVMVCSDTSAAHSIISIKQDEDKIVPIDDHKVFC-IAGEAGDRVNFSEYIIAN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADKTITL-VITGMGDVLE 129
           ++ Y  +        +        L         +   ++   D+     +         
Sbjct: 64  VKLYALRNGTPLNTKSVANYTRGELATALRSSPYHCNLLLAGWDEQAGASLYWMDYLATL 123

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
            +      G G  + LS    +     + +E    AM  A 
Sbjct: 124 NKINTGGTGYGSYFTLSLFDKMWHPNLTVDEAT--AMMEAG 162


>gi|194705072|gb|ACF86620.1| unknown [Zea mays]
          Length = 216

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 10/136 (7%)

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIADK 115
             +AD   + + +   L Q+  QL + +                   L+    +      
Sbjct: 42  SQAADTQVISDYIRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKY 101

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               + +        +      GSG SY  +          S   AE+   K +S+A   
Sbjct: 102 EGGQIFSVPLGGTILKQPFAIGGSGSSYLYALLDHEWKEGMSQEEAEKFVVKVVSLAMAR 161

Query: 173 CVYTNHNIVLETLKVG 188
              +   +   T+   
Sbjct: 162 DGASGGVVRTVTINAD 177


>gi|253744748|gb|EET00903.1| 20S proteasome alpha subunit 5 [Giardia intestinalis ATCC 50581]
          Length = 245

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 17/187 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T L +R    +V A + + S    +     R +        +A  AG ++D+  LL+   
Sbjct: 34  TALAIRTRVGIVFAVERRTSSPLRLQTRFERIMHVDDH--AMACVAGHASDSKLLLQSAR 91

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL-------------RNLEAMILIADKTITLVITG 123
            + + +           A    + + L                  +I   D +   +   
Sbjct: 92  TEAQSHRFLYDEFVPLQALSESLSEVLINFGRGKKKLGRPFGCSLLIGGLDGSTPRLFCA 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT--NHNIV 181
                  E    ++G+G + A    +       S E+    A+ I  D+   T    N+ 
Sbjct: 152 EPSGSVTEAVARSLGAGSTTAQQTLQDSYREDMSLEDAKLLALEILRDVMESTVRGDNVE 211

Query: 182 LETLKVG 188
           + T+   
Sbjct: 212 MATISYD 218


>gi|308812780|ref|XP_003083697.1| 20S proteasome beta 4 subunit (ISS) [Ostreococcus tauri]
 gi|116055578|emb|CAL58246.1| 20S proteasome beta 4 subunit (ISS) [Ostreococcus tauri]
          Length = 767

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 46/168 (27%), Gaps = 20/168 (11%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +         V+  D   +    V K++  K+  +    I+A  +G   D     E +  
Sbjct: 4   VFGFVGYDFAVLVADRAATQQIIVQKSDEDKIAVVDGTKIMAT-SGPRGDCVAFAEYVAA 62

Query: 78  KLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITLVITGMGDVLE 129
            +  Y  +        A            + K    + A++   D     +         
Sbjct: 63  NVRLYRLKYQHELDVKATAHYARNELATALRKGPYQVNALLAGVDANGPELYFMDYLATC 122

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
                   G GG + LS          S   A E+         D+CV
Sbjct: 123 HRVNTGGHGYGGMFCLSLFDKHWVPNMSRAQAMELV--------DLCV 162


>gi|46125809|ref|XP_387458.1| hypothetical protein FG07282.1 [Gibberella zeae PH-1]
          Length = 271

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 50/168 (29%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   VVV+  + + ++     +    K++ L     +A FAG +ADA  L++
Sbjct: 32  RGTCAVGVKGTDVVVLGCEKRSAMKLQDTRITPSKIQLLDHHVALA-FAGLNADARILVD 90

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 91  KARLEAQSHRLSVEDPVTIDYITKYVAGVQQRYTQAGGVRPFGISTLIVGFDHGSDVPRL 150

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  +       AIG                  + E   R A+  
Sbjct: 151 YQTEPSGIYSAWKANAIGRSSKTVREFLERNYKEDMNREATIRLAIKS 198


>gi|299752286|ref|XP_001830819.2| proteasome subunit alpha type 4 [Coprinopsis cinerea okayama7#130]
 gi|298409764|gb|EAU90883.2| proteasome subunit alpha type 4 [Coprinopsis cinerea okayama7#130]
          Length = 261

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 23/172 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVR-------RLGKGNIIAGFAGSSA 66
           HA T+L V     VV+A + +V+     + ++             L   N+I G AG +A
Sbjct: 30  HAGTVLGVLAKDGVVLAAEKKVTGKLLDLSSSKEGGYGGSGEKIFLLNSNVIGGVAGLTA 89

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTI 117
           DA +L+       +++               R+            LR     +L A    
Sbjct: 90  DANSLVNFARNAAQRHLLTYNEDIPVELLAQRLCDMKQGYTQFGGLRPFGVSLLYAGYDP 149

Query: 118 TL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                +                IG+    A S  +           + + A+
Sbjct: 150 HYQFQLYHSDPSGNYSGWKATCIGANNGTAQSLLKQEYKDDI----VVKDAI 197


>gi|255641784|gb|ACU21161.1| unknown [Glycine max]
          Length = 235

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 67/192 (34%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+ +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDEASVQKIQLLTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R    + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYHRLYKEPIPVTQLVREVAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+          I   +  
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQI---SGK 206

Query: 179 NIVLETLKVGDE 190
           NI +  +    +
Sbjct: 207 NIEIGIIGADKK 218


>gi|124000579|gb|ABM87798.1| proteasome (prosome, macropain) subunit, beta type, 2 [synthetic
           construct]
          Length = 201

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYPAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELFRKCLE 165


>gi|312377363|gb|EFR24207.1| hypothetical protein AND_11358 [Anopheles darlingi]
          Length = 193

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 14/154 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + S+ +   +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAIGVRGKDVVVLGVEKK-SVAKLQEERTVRKICLLDHH-VVMAFAGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R    + + +      R      LI          + 
Sbjct: 88  RAQVECQSHKLNVEDPVTLEYITRFIAGMKQKYTQSNGRRPFGISCLIGGFDYDGKPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                 +  E    A G           A  + +
Sbjct: 148 QTEPSGVYCEWKANATGRSAKTVREFLEAQYTPE 181


>gi|194376656|dbj|BAG57474.1| unnamed protein product [Homo sapiens]
          Length = 167

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 11/123 (8%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ +G +VIA D   S G      N  ++ R+    ++ G +G  AD
Sbjct: 47  QNPM-VTGTSVLGVKFEGGMVIAADMLGSYGSLARFRNISRIMRVNNSTML-GASGDYAD 104

Query: 68  AFTLLERL------EKKLEQYPNQLLRSSV---ELAKDWRMDKYLRNLEAMILIADKTIT 118
              L + L      E+ L    +   R+       A   R  K       M++       
Sbjct: 105 FQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE 164

Query: 119 LVI 121
             I
Sbjct: 165 RFI 167


>gi|195479154|ref|XP_002100785.1| GE17253 [Drosophila yakuba]
 gi|194188309|gb|EDX01893.1| GE17253 [Drosophila yakuba]
          Length = 249

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEKK-SVAKLQEDRTVRKICMLDHH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T++ A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKVVREFFEKAYDEKEVATEHGAVKLAIRAL 197


>gi|68471743|ref|XP_720178.1| hypothetical protein CaO19.7983 [Candida albicans SC5314]
 gi|68472004|ref|XP_720045.1| hypothetical protein CaO19.350 [Candida albicans SC5314]
 gi|46441895|gb|EAL01189.1| hypothetical protein CaO19.350 [Candida albicans SC5314]
 gi|46442033|gb|EAL01326.1| hypothetical protein CaO19.7983 [Candida albicans SC5314]
 gi|238880739|gb|EEQ44377.1| proteasome component Y13 [Candida albicans WO-1]
          Length = 251

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 17/186 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T + +     VV+A + +V+        +A K+  +    +I   AG +ADA  L+ 
Sbjct: 30  NAGTAIGILSPEGVVLACEKKVTSKLLDDDGSAEKLYII-NDQMICAVAGMTADASILVN 88

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
               + +QY            L+    ++ + +     LR      L A   D+    + 
Sbjct: 89  NARIQAQQYLKLYDEEIPCEMLINRVCDVKQGYTQHGGLRPFGVSFLYAGYDDRYQFQLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYTNHNI 180
           T             +IG+  S A +  +       + ++    A+ + +  +      NI
Sbjct: 149 TSNPSGNYSGWKATSIGANNSAAQTLLKKDYKDDLTLKDACELAIKVLSKTMDA---SNI 205

Query: 181 VLETLK 186
             E L+
Sbjct: 206 NSEKLE 211


>gi|195171089|ref|XP_002026343.1| GL20413 [Drosophila persimilis]
 gi|198461293|ref|XP_002138981.1| GA25111 [Drosophila pseudoobscura pseudoobscura]
 gi|194111245|gb|EDW33288.1| GL20413 [Drosophila persimilis]
 gi|198137295|gb|EDY69539.1| GA25111 [Drosophila pseudoobscura pseudoobscura]
          Length = 252

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 14/150 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R +  +V+  + + S      + + RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  RGSTAVGLRTNDCIVVGVEKR-SSNPLFDERSMRKISMLDNH-VVMTFAGLTADARVLIS 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA------------MILIADKTITLVI 121
           R + + + Y     R          + +  +N               M          + 
Sbjct: 88  RAQAEAQSYRLNFERPVTVEYITRFIAQMKQNYTQSNGRRPFGLSCLMGGFDGDGKPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARAL 151
                 +  E    + G  G+ A       
Sbjct: 148 QTEPSGIYYEWTGSSTGRAGTTAREYMEKH 177


>gi|294867461|ref|XP_002765110.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
           fold, putative [Perkinsus marinus ATCC 50983]
 gi|239865032|gb|EEQ97827.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase
           fold, putative [Perkinsus marinus ATCC 50983]
          Length = 184

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 8/127 (6%)

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRM--DKYLRNLEAMILIADKTI---TLVITGMG 125
           +   L       P   L      A   R+      + L A +++A         V +   
Sbjct: 46  VKYFLNAHANDLPLDRLPKVKTAANLMRLLAYNNKQYLTAGLIVAGWDQTEGPQVYSIPL 105

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVL 182
                +  +   GSG +Y       L     S   AE+   KA++ A      +   I +
Sbjct: 106 GGTIIKQNIATGGSGSTYITGLVDHLYRPDMSREEAEDFVAKAVAHAMARDGSSGGVIRV 165

Query: 183 ETLKVGD 189
            T+   D
Sbjct: 166 TTVTEKD 172


>gi|328856517|gb|EGG05638.1| hypothetical protein MELLADRAFT_43834 [Melampsora larici-populina
           98AG31]
          Length = 265

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 51/163 (31%), Gaps = 15/163 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR     ++  + + S+ Q       RKV  L     +A FAG +ADA  L++
Sbjct: 30  KGTCAVGVRGKSCAILGVEKK-SVLQLQDPRTVRKVAMLDDHVCLA-FAGLTADARILID 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD-------KTITLV 120
           +   + + +   +            +A+  +       +    +          +T   +
Sbjct: 88  KARVECQSHRLNVEDPVTVEYITRHIAQIQQRYTQSGGVRPFGISTLIIGFDPHETAPKL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
            +     +       AIG              +   S EE  +
Sbjct: 148 YSTEPSGVFSLWKANAIGRSSKTVKEFLEKHWAEDLSTEEAIK 190


>gi|331221229|ref|XP_003323289.1| proteasome subunit beta type-2 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309302279|gb|EFP78870.1| proteasome subunit beta type-2 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 378

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 54/167 (32%), Gaps = 21/167 (12%)

Query: 20  TVRKDGVVVI------AGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            +     V++      A D   +     MKANA K + + K  ++  ++G   D     E
Sbjct: 6   GITGKDYVILFGILQTASDSSANRSIVRMKANADKQKVVSKH-VVMAYSGEPGDTVQFAE 64

Query: 74  RLEKKLEQYPNQLLRSS-VELAKDW--------RMDKYLRNLEAMILIAD--KTITLVIT 122
            +E+ L  Y  +         A  W           +   ++  ++   D  + + L+  
Sbjct: 65  YVERNLRLYGIRNHVDLLPHEAASWTRNQLASSLRSRNAYSVNLLLGGFDTAEAVPLLYW 124

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                   +    A G G  + LS            +   E+ ++ +
Sbjct: 125 IDYLGTMAQVPYAAHGYGAYFCLSTMDRFHRPDMDLQQGLELLKRCI 171


>gi|225713460|gb|ACO12576.1| Proteasome subunit alpha type-7 [Lepeophtheirus salmonis]
 gi|225714478|gb|ACO13085.1| Proteasome subunit alpha type-7 [Lepeophtheirus salmonis]
 gi|290462685|gb|ADD24390.1| Proteasome subunit alpha type-7 [Lepeophtheirus salmonis]
 gi|290561979|gb|ADD38387.1| Proteasome subunit alpha type-7 [Lepeophtheirus salmonis]
          Length = 253

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + +        +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGKDVVVLGVEKKAVPKLQ-EERTVRKICLLDDH-VVMAFAGLTADARILVN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            +              + 
Sbjct: 88  RGRIECQSHKLTVEDPVTLEYITRYIASLKQKYTQSAGRRPFGISCLLTGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +  E    AIG                  S+ E  + A+  
Sbjct: 148 QTDPAGIYSEWKANAIGRNAKTVREFLEKEYKADASSSETVKLAVKA 194


>gi|290462861|gb|ADD24478.1| Proteasome subunit alpha type-7 [Lepeophtheirus salmonis]
          Length = 253

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + +        +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGKDMVVLGVEKKAVPKLQ-EERTVRKICLLDDH-VVMAFAGLTADARILVN 87

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +         +  +A   +            +              + 
Sbjct: 88  RGRIECQSHKLTVEDPVTLEYIARYIASLKQKYTQSAGRRPFGISCLLTGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +  E    AIG                  S+ E  + A+  
Sbjct: 148 QTDPAGIYSEWKANAIGRNAKTVREFLEKEYKADASSSETVKLAVKA 194


>gi|241953109|ref|XP_002419276.1| proteasome subunit, putative [Candida dubliniensis CD36]
 gi|223642616|emb|CAX42866.1| proteasome subunit, putative [Candida dubliniensis CD36]
          Length = 251

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 17/186 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T + +     VV+A + +V+        +A K+  +    +I   AG +ADA  L+ 
Sbjct: 30  NAGTAIGILSSEGVVLACEKKVTSKLLDDDGSAEKLYII-NDQMICAVAGMTADASILVN 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR---------MDKYLRNLEAMILIA---DKTITLVI 121
               + +QY               R             LR      L A   D+    + 
Sbjct: 89  NARIQAQQYLKMYDEEIPCEMLINRVCDVKQGYTQHGGLRPFGVSFLYAGYDDRYQFQLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYTNHNI 180
           T             +IG+  S A +  +       + ++    A+ + +  +      NI
Sbjct: 149 TSNPSGNYSGWKATSIGANNSAAQTLLKKDYKDDLTLKDACELAIKVLSKTMDA---SNI 205

Query: 181 VLETLK 186
             E L+
Sbjct: 206 NSEKLE 211


>gi|308799609|ref|XP_003074585.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
 gi|116000756|emb|CAL50436.1| proteasome beta subunit (ISS) [Ostreococcus tauri]
          Length = 203

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 43/153 (28%), Gaps = 11/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVS-LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + +     V IA D ++          +  K+ ++     + G  G  AD  TL ++L  
Sbjct: 10  VAMVGKDCVAIASDLRLGINQNQTTAVDYSKLHKIHDKLWL-GLTGLIADQLTLAQKLRF 68

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI-TGMGDVLEPE----- 131
           K + Y  +  R          +   L          +  +  +   G   +   +     
Sbjct: 69  KHDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDKDGKPYITSMDLIGAD 128

Query: 132 ---NGVMAIGSGGSYALSAARALMSTQNSAEEI 161
              +  +  G           +        +E+
Sbjct: 129 ASADDFVVAGDNVESLFGVCESFYRKDLEPDEL 161


>gi|225713254|gb|ACO12473.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
 gi|290561176|gb|ADD37990.1| Proteasome subunit beta type-2 [Lepeophtheirus salmonis]
          Length = 210

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 46/155 (29%), Gaps = 12/155 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +     V++A D Q      +M  +  +       +++    G S D     E + 
Sbjct: 3   TSIGIAFHDFVMVATD-QTCAQSILMLKDTCEKTYPLTNHLLMSALGESGDTTQFAEFMA 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAM----ILIADKTITL---VITGMG 125
           K ++ Y  +               +    YLR+        ++      +    + T   
Sbjct: 62  KNIQLYKMRNAYEMSPSEAANFTRRNLADYLRSRTPFHVNLLIAGYDKKSNKTELYTVDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                +    + G GG ++            + EE
Sbjct: 122 LAGMVQTEHASHGYGGIFSSGILDRNYRPDMTVEE 156


>gi|225709330|gb|ACO10511.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
          Length = 204

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 44/155 (28%), Gaps = 12/155 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +  +  V++A D   +    +MK    K   L     +    G S D     E + 
Sbjct: 3   TSIGIAFNDFVMVATDQTCAHSILLMKDTCEKTYSLSNHR-LMSAIGQSGDTTEFAEFMT 61

Query: 77  KKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK--TITLVITGMG 125
           K ++ Y  +                        +   ++  ++   DK      + +   
Sbjct: 62  KNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNPFHVNLLVAGFDKKSEQAELYSMDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                +      G GG ++            + EE
Sbjct: 122 LAGMVKTAHATHGYGGVFSSGILDRHYKPDMTVEE 156


>gi|156937247|ref|YP_001435043.1| proteasome subunit alpha [Ignicoccus hospitalis KIN4/I]
 gi|156566231|gb|ABU81636.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
          Length = 239

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 47/164 (28%), Gaps = 10/164 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTL 71
              + +  +    VV+A   +  +   V      K+  +    +   AG A        +
Sbjct: 36  RGWSTIGAKCKEGVVVAASKK-KVQTLVDFDKLEKIHFIDDHIVTSFAGLAADGRVLVDV 94

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD-KTITLVITGM 124
             R         ++      + ++  +L + +     +R     ++IA       V    
Sbjct: 95  ARRAALNYRFLYDEPAPVEYVTKAVSDLKQVYTQHGGVRPFGVSLIIAGVDDEPQVFMTE 154

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                     +AIG      +    A      S +E+ +  +  
Sbjct: 155 PSGQYMSYKAVAIGQNHHILMEFLEANYKYDLSLDELVKLVLKA 198


>gi|1220188|gb|AAC47281.1| testes-specific proteasome subunit [Drosophila melanogaster]
          Length = 249

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 58/171 (33%), Gaps = 24/171 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R +  +VI  + + S+G    +   RK+  L    ++  F+G +ADA  L+ 
Sbjct: 30  RGSTVMGLRTNNAIVIGVEKR-SVGDLQEERMVRKICMLDDH-VVMTFSGLTADARILVS 87

Query: 74  RLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +     +            +L +++      R      L+          + 
Sbjct: 88  RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                 +  E      G                   A+EI    ++IA + 
Sbjct: 148 QTDPSGIFYEWRANTTGRSSQPVRDYMEKH------ADEI----LTIADER 188


>gi|26347309|dbj|BAC37303.1| unnamed protein product [Mus musculus]
          Length = 201

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 165


>gi|240281173|gb|EER44676.1| proteasome component PUP3 [Ajellomyces capsulatus H143]
          Length = 140

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 37/138 (26%), Gaps = 11/138 (7%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           +     V IA D ++ L    +  +  K+        + G  G + D  ++ + L  K+ 
Sbjct: 1   MVGKDCVAIACDLRLGLQALTVSNSFPKIFNYAPSTYL-GLTGLATDVSSVSDLLRYKVN 59

Query: 81  QYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITGMG-DVLEP 130
            Y  +  R                  R   Y  +     + +      +        ++ 
Sbjct: 60  MYRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIGCIDF 119

Query: 131 ENGVMAIGSGGSYALSAA 148
               +  G+         
Sbjct: 120 AKDFIVSGTASDQLFGTC 137


>gi|189201059|ref|XP_001936866.1| proteasome subunit alpha type-4 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|330926491|ref|XP_003301480.1| hypothetical protein PTT_13000 [Pyrenophora teres f. teres 0-1]
 gi|187983965|gb|EDU49453.1| proteasome subunit alpha type-4 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|311323656|gb|EFQ90425.1| hypothetical protein PTT_13000 [Pyrenophora teres f. teres 0-1]
          Length = 253

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPQRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                        ++G+  + A S  +     +   +E   +A K +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEECDLKEACGLAVKVL 196


>gi|224122692|ref|XP_002318902.1| predicted protein [Populus trichocarpa]
 gi|224134414|ref|XP_002321818.1| predicted protein [Populus trichocarpa]
 gi|118482898|gb|ABK93363.1| unknown [Populus trichocarpa]
 gi|118484736|gb|ABK94237.1| unknown [Populus trichocarpa]
 gi|118484885|gb|ABK94309.1| unknown [Populus trichocarpa]
 gi|118485354|gb|ABK94535.1| unknown [Populus trichocarpa]
 gi|118487820|gb|ABK95733.1| unknown [Populus trichocarpa]
 gi|222859575|gb|EEE97122.1| predicted protein [Populus trichocarpa]
 gi|222868814|gb|EEF05945.1| predicted protein [Populus trichocarpa]
          Length = 235

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 67/190 (35%), Gaps = 21/190 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +++ +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDESSVQKIQNLTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGFDDKGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+          I   +  
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQI---SGK 206

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 207 NIEIGIIGAD 216


>gi|225679093|gb|EEH17377.1| proteasome subunit alpha type-4 [Paracoccidioides brasiliensis
           Pb03]
 gi|226288109|gb|EEH43622.1| proteasome component Y13 [Paracoccidioides brasiliensis Pb18]
          Length = 251

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRHFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 195


>gi|221043412|dbj|BAH13383.1| unnamed protein product [Homo sapiens]
          Length = 155

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 5  GDKHYAVKM-HATTILTVRKDGVVVIAGDGQVSLGQTVM 42
          G+++  ++M H TT L  +    V+ A D + S G  + 
Sbjct: 61 GERNVQIEMAHGTTTLAFKFQHGVIAAVDSRASAGSYIS 99


>gi|255932237|ref|XP_002557675.1| Pc12g08450 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582294|emb|CAP80472.1| Pc12g08450 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 255

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  +    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYTINDNMICAVAGMNADANILINY 89

Query: 72  LE------RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
                    L    +    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQNAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDHLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACAMAVKV 195


>gi|26353354|dbj|BAC40307.1| unnamed protein product [Mus musculus]
          Length = 177

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVY 175
            +     +         ++GSG  YA        S       A ++AR+A+  A     Y
Sbjct: 82  GLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAY 141

Query: 176 TNHNIVL 182
           +   + L
Sbjct: 142 SGGAVNL 148



 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           +H TT L  +    V++A D + + G   +  ++   R  G    +   +  +       
Sbjct: 57  LHGTTTLAFKFLHGVIVAADSRATAGLYYV--DSEGNRISGTAFSVGSGSVYAYGVMDRG 114

Query: 73  ERLEKKLEQYPNQLLRSSVELA 94
              + K+E+  +   R+  +  
Sbjct: 115 YSYDLKVEEAYDLARRAIYQAT 136


>gi|66802103|ref|XP_629845.1| proteasome subunit alpha type 2 [Dictyostelium discoideum AX4]
 gi|74896791|sp|Q54DM7|PSA2_DICDI RecName: Full=Proteasome subunit alpha type-2
 gi|60463224|gb|EAL61417.1| proteasome subunit alpha type 2 [Dictyostelium discoideum AX4]
          Length = 232

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 60/165 (36%), Gaps = 14/165 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             + + ++    VV+  + +  L   V   + +K+  + +   +  +AG   D+  L+++
Sbjct: 31  GGSAIGIKAKNGVVLITEKK--LHSLVDVTSVQKISMITENIGLV-YAGMGPDSRVLIKK 87

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ E+Y           QL+R    + +++     +R     +L+A  D+    +   
Sbjct: 88  ARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKGPHLYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                       AIG     + +      S     E+  + A+  
Sbjct: 148 DPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEIEDAIQTALIT 192


>gi|196014715|ref|XP_002117216.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190580181|gb|EDV20266.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 252

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 47/161 (29%), Gaps = 14/161 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            +I+ +R    VVI  +  +S       +N +        ++  GFAG  AD   ++   
Sbjct: 35  GSIIAIRCKDGVVIGVEKILSSRLHEKSSNQKIYNV--DRHVGMGFAGIQADGRKVVSIA 92

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE------------AMILIADKTITLVITG 123
             +  +Y               R+  Y+                 +   ++     +   
Sbjct: 93  RDEASEYRQNYGSDVPLKQLVNRVASYIHAYTLYSSVRPFGVSAVLASYSEAYGPELYMI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
               L       A G       +    + +   + EEI ++
Sbjct: 153 EPSGLYWGYRACAAGKAKQAVKTELEKIKANDMTCEEIVKE 193


>gi|325096025|gb|EGC49335.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 251

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 195


>gi|295658654|ref|XP_002789887.1| proteasome subunit alpha type-4 [Paracoccidioides brasiliensis
           Pb01]
 gi|226282848|gb|EEH38414.1| proteasome subunit alpha type-4 [Paracoccidioides brasiliensis
           Pb01]
          Length = 251

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRHFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 195


>gi|154273695|ref|XP_001537699.1| proteasome component PUP2 [Ajellomyces capsulatus NAm1]
 gi|150415307|gb|EDN10660.1| proteasome component PUP2 [Ajellomyces capsulatus NAm1]
 gi|225559131|gb|EEH07414.1| proteasome component PUP2 [Ajellomyces capsulatus G186AR]
 gi|240282056|gb|EER45559.1| proteasome component PUP2 [Ajellomyces capsulatus H143]
 gi|325088194|gb|EGC41504.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 245

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 57/173 (32%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D++ 
Sbjct: 92  ARVESQNHAFNYSEPLKVESCTQAICDLALRFGEGADGEESVMSRPFGVALLIAGYDESG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +    +  +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQTEYHSSLTLAEAETLVLKTLK 204


>gi|225557322|gb|EEH05608.1| proteasome component [Ajellomyces capsulatus G186AR]
          Length = 256

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 35  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 94

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 95  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPLRQFQLYQ 154

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 155 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 200


>gi|39946336|ref|XP_362705.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|59802961|gb|AAX07682.1| proteasome subunit alpha type 4-like protein [Magnaporthe grisea]
 gi|145020008|gb|EDK04236.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 251

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINF 89

Query: 72  LE------RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
                    L    +    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQNAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPQRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +       S +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCSLKEACGMAVKV 195


>gi|225712898|gb|ACO12295.1| Proteasome subunit alpha type-7 [Lepeophtheirus salmonis]
          Length = 253

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 48/167 (28%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + +        +   RKV  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGKDVVVLGVEKKAVPKLQ-EERTVRKVCLLDDH-VVMAFAGLTADARILVN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            +              + 
Sbjct: 88  RGRIECQSHKLTVEDPVTLEYTTRYIASLKQKYTQSAGRRPFGISCLLTGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +  E    AIG                  S+ E  + A+  
Sbjct: 148 QTDPAGIYSEWKANAIGRNAKTVREFLEKEYKADASSSETVKLAVKA 194


>gi|171688558|ref|XP_001909219.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944241|emb|CAP70351.1| unnamed protein product [Podospora anserina S mat+]
          Length = 245

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 57/173 (32%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGISTSTGVILGVEKRVTS-SLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQ-----LLRSSVELAKDWRM----------DKYLRNLEAMILIA--DKTI 117
              + + +         + S  +   D  +              R     +LIA  D+  
Sbjct: 92  ARVECQSHAFNYNENLRVESCTQAICDLALRFGESADGEESIMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A +  +           AE +  K + 
Sbjct: 152 PSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTIEDAETLVLKTLK 204


>gi|156042279|ref|XP_001587697.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154696073|gb|EDN95811.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 256

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDPQREFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKEDCDLKEACGMAVKV 195


>gi|260804394|ref|XP_002597073.1| hypothetical protein BRAFLDRAFT_201484 [Branchiostoma floridae]
 gi|229282335|gb|EEN53085.1| hypothetical protein BRAFLDRAFT_201484 [Branchiostoma floridae]
          Length = 262

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 17/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  +V+A + + +         + K+ +L         AG ++DA  L  
Sbjct: 30  HAGTCLGILANDGIVLAAERRNTHKLLDEVFFSEKIYKLHDDMA-CSVAGITSDANVLTN 88

Query: 74  RLEKKLEQYPNQLLRSSVE-----------LAKDWRMDKYLRNLEAMILIADKTITL-VI 121
            L    ++Y  Q                   A      K    +  + +  DK     + 
Sbjct: 89  ELRLIAQRYILQYQEPIPCEQLVSSLCDIKQAYTQWGGKRPFGVSILYIGWDKHYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTN 177
                          IG+  + A+S  +            A ++A K +S   D+   T 
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAVSMLKQEYKIDEMTMQDALQLAIKVVSKTLDVSKLTP 208

Query: 178 HNIVLETLKVGD 189
             + L TL   +
Sbjct: 209 EKVELATLTREN 220


>gi|197632491|gb|ACH70969.1| proteasome subunit alpha type 7-1 [Salmo salar]
 gi|221221456|gb|ACM09389.1| Proteasome subunit alpha type-7 [Salmo salar]
          Length = 251

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDDH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR-----------MDKYLRNLEAMILIADKT-ITLVI 121
           R   + + +   +                         +    + A+I+  D      + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDCDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +T N A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEESIATDNEAIKLAIKAL 197


>gi|303311685|ref|XP_003065854.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105516|gb|EER23709.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320039756|gb|EFW21690.1| proteasome component [Coccidioides posadasii str. Silveira]
          Length = 251

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDSLGQFQLFQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKDDCDLKEACGMAVKV 195


>gi|77022652|ref|XP_888770.1| hypothetical protein CaO19_6582 [Candida albicans SC5314]
 gi|76573583|dbj|BAE44667.1| hypothetical protein [Candida albicans]
          Length = 266

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 57/172 (33%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    +V+A +  +     + K N ++++ + +   +  ++G   D    + 
Sbjct: 33  NGGTSIGIKCKDGIVLAVEKIIQSKLLIPKKN-KRIQTVDRNIGVV-YSGLLPDGRHFVN 90

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +          + L+       +++     +R    + +I           +
Sbjct: 91  RCRDECQSFKSIFKTMMPISNLMDRMGIYVQNYTCYNSVRPFGIVSIIGGVDNEDGEPYL 150

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                          A G G   A S    L   + +  E    A++ AA I
Sbjct: 151 YMIEPSGSYWGYNGAATGKGRQIAKSELEKLNYEELTCLE----AINHAARI 198


>gi|68469262|ref|XP_721418.1| hypothetical protein CaO19.6582 [Candida albicans SC5314]
 gi|68470287|ref|XP_720905.1| hypothetical protein CaO19.13935 [Candida albicans SC5314]
 gi|46442797|gb|EAL02084.1| hypothetical protein CaO19.13935 [Candida albicans SC5314]
 gi|46443335|gb|EAL02618.1| hypothetical protein CaO19.6582 [Candida albicans SC5314]
 gi|238883307|gb|EEQ46945.1| proteasome component C1 [Candida albicans WO-1]
          Length = 239

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 57/172 (33%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    +V+A +  +     + K N ++++ + +   +  ++G   D    + 
Sbjct: 6   NGGTSIGIKCKDGIVLAVEKIIQSKLLIPKKN-KRIQTVDRNIGVV-YSGLLPDGRHFVN 63

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +          + L+       +++     +R    + +I           +
Sbjct: 64  RCRDECQSFKSIFKTMMPISNLMDRMGIYVQNYTCYNSVRPFGIVSIIGGVDNEDGEPYL 123

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                          A G G   A S    L   + +  E    A++ AA I
Sbjct: 124 YMIEPSGSYWGYNGAATGKGRQIAKSELEKLNYEELTCLE----AINHAARI 171


>gi|255723451|ref|XP_002546659.1| proteasome component C11 [Candida tropicalis MYA-3404]
 gi|240130790|gb|EER30353.1| proteasome component C11 [Candida tropicalis MYA-3404]
          Length = 194

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 13/155 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL ++     +IA     + G +V+K    K R L   N+IA + G + D     E ++ 
Sbjct: 4   ILGIKVSDATIIATSKAATRGISVLKDTDDKTRHLNAHNLIA-YTGEAGDTVQFAEYVQA 62

Query: 78  KLEQYPNQLL------------RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
            ++ Y  +                +           Y  N              +     
Sbjct: 63  NIQLYSMRENDIELSPKATASFVRTQLATSLRSRKPYQVNCLIGGYDVKTNKPSLNWIDY 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              + E    A G    Y  S        + + EE
Sbjct: 123 LGTQVELPYGAHGYAAFYTTSLLDKHYRKEMTVEE 157


>gi|223993157|ref|XP_002286262.1| proteasome subunit alpha type 7-1 [Thalassiosira pseudonana
           CCMP1335]
 gi|220977577|gb|EED95903.1| proteasome subunit alpha type 7-1 [Thalassiosira pseudonana
           CCMP1335]
          Length = 248

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 56/168 (33%), Gaps = 15/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+A + +  L +       RK+  + + +++A FAG +ADA  L+ 
Sbjct: 28  RGSTAVGVRGKDCVVLAVERRA-LAKLQDPRTIRKIVSVDERSVLA-FAGLTADARVLIN 85

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMIL------IADKTITLVI 121
           +   + + Y      +      +  +A+  +       +    +       +++   ++ 
Sbjct: 86  KTRTEAQSYRLTCEDAPSVEYLARYIARTQQKYTQRGGVRPFGIATLLAGFSEEGSPVLY 145

Query: 122 TGMGDVLEPENGV-MAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                    E    +  G                    ++  R ++  
Sbjct: 146 QTDPAGTHSEWKAQVIGGRNAKSLREFLEKNWEEGLEEDKAVRMSVQA 193


>gi|260805606|ref|XP_002597677.1| hypothetical protein BRAFLDRAFT_279789 [Branchiostoma floridae]
 gi|229282944|gb|EEN53689.1| hypothetical protein BRAFLDRAFT_279789 [Branchiostoma floridae]
          Length = 252

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 50/174 (28%), Gaps = 27/174 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
             +T + VR   +VV+  + +      + K       RK+  L    +   FAG +ADA 
Sbjct: 30  KGSTAVGVRGKDIVVLGVEKKA-----IAKLQDERTVRKICLLDDH-VAMAFAGLTADAR 83

Query: 70  TLLERLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI--- 117
            L+ R   + + +   +          R    L + +      R      LI        
Sbjct: 84  ILINRARVECQSHRLTVEDPVTLEYITRYIATLKQRYTQSNGRRPFGISCLIVGFDFDGT 143

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
             +          E    A G                    +     ++A KA+
Sbjct: 144 PHLYQTDPSGTHHEWKANATGRSAKTVREYLEKHYTNELADSDTECIKLALKAL 197


>gi|67479948|ref|XP_655350.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56472476|gb|EAL49960.1| proteasome alpha subunit, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 236

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 49/162 (30%), Gaps = 12/162 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
            +T + ++    +V+A +   SL    +  + +K+  L     +            + + 
Sbjct: 34  GSTSVGIKAKDGIVLAVEK--SLPPMYISESIQKINHLCDSVGMVSSGMGPDARVLVKKG 91

Query: 74  -------RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM 124
                   LE + +   + + R    L +++     +R     +L+A  D     +    
Sbjct: 92  RKEGQKYWLEYQEDINCSMMTRKLAYLMQEYTQKGGVRPFGVSVLVAGFDGKTPRLYQVD 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                      A+G   +   +            E+    A+
Sbjct: 152 PSGSFWTWKATALGKNMTSVKTFLEKRYHDDIELEDAIHTAI 193


>gi|307108241|gb|EFN56482.1| hypothetical protein CHLNCDRAFT_48764 [Chlorella variabilis]
          Length = 235

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 21/190 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L +R    VV+A + ++     V ++  +K+  L    +   ++G   D+  L+ +
Sbjct: 32  GATSLGIRATDGVVLATEKKLPS-ILVDESTVQKISLLTPN-VGMTYSGMGPDSRVLVRK 89

Query: 75  LEK----KLEQYPNQLL-----RSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K       QY  Q+      R +  + +++     +R     +L+A  D     +   
Sbjct: 90  ARKSGQVYYRQYHEQIPVAQLCRETAAVMQEFTQSGGVRPFGVSLLMAGYDDNGPQLYQI 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       AIG     A +      S     E+    A+         ++   +  
Sbjct: 150 DPSGSYFAWKASAIGKNMVNAKTFLEKRYSEDMELEDAIHTALLTLKEGFEGEL---SGD 206

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 207 NIEVAVVGED 216


>gi|195628706|gb|ACG36183.1| proteasome subunit alpha type 3 [Zea mays]
          Length = 249

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 50/163 (30%), Gaps = 12/163 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTV--MKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           ++ T++ ++    +V+  +  V+    +         V RL  G ++AG A       + 
Sbjct: 33  NSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHRL-SGLVVAGLAADGRQIVSR 91

Query: 72  LERLEKKLEQYPNQL--------LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
            +      E+   +           +S                  ++   D+    +   
Sbjct: 92  AKSEAASYEKVYGEPIPVKDLADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMI 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
               +  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 152 EPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|146422381|ref|XP_001487130.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
 gi|152060493|sp|A5DB52|PSB2_PICGU RecName: Full=Probable proteasome subunit beta type-2
 gi|146388251|gb|EDK36409.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 194

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 52/165 (31%), Gaps = 16/165 (9%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L +R +   ++A     + G +V+K    K R+L   N +  ++G + D     E ++ 
Sbjct: 4   VLGIRVEDCTLVATSKAATRGISVLKDTDDKTRQLNSHN-LMAYSGEAGDTVQFAEYIQA 62

Query: 78  KLEQYPNQLLRS----------SVELAKDWRMDKYLRNLEAMILIADKT--ITLVITGMG 125
             + Y  +   +                     +    +  ++   D       +     
Sbjct: 63  NTQLYTMRENDTELSPKATASFVRNQLATSIRSRKPYQVNVLLAGYDTNTGKPSLNWIDY 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMS 167
              + E    A G  G Y  S          + E   ++ +K + 
Sbjct: 123 LGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFEDGLDLLKKCIK 167


>gi|261204329|ref|XP_002629378.1| proteasome component PUP2 [Ajellomyces dermatitidis SLH14081]
 gi|239587163|gb|EEQ69806.1| proteasome component PUP2 [Ajellomyces dermatitidis SLH14081]
 gi|239614297|gb|EEQ91284.1| 20S proteasome alpha subunit E [Ajellomyces dermatitidis ER-3]
 gi|327356330|gb|EGE85187.1| proteasome subunit alpha type-5 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 245

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVESQNHAFNYSEPLRVESCTQAICDLALRFGEGADGEESVMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQTEYHRSLTLVEAETLVLKTLK 204


>gi|221219950|gb|ACM08636.1| Proteasome subunit alpha type-7 [Salmo salar]
          Length = 251

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDDH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +T N A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEEAIATDNEAIKLAIKAL 197


>gi|297665553|ref|XP_002811111.1| PREDICTED: proteasome subunit beta type-2-like [Pongo abelii]
          Length = 201

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 165


>gi|119193923|ref|XP_001247565.1| proteasome component [Coccidioides immitis RS]
          Length = 251

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGYDSLGQFQLFQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYKDDCDLKEACGMAVKV 195


>gi|255645868|gb|ACU23424.1| unknown [Glycine max]
          Length = 235

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++       +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQLSTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R    + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYHRLYKEPIPVTQLVREVAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    ++          I   +  
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTSILTLKEGFEGQI---SGK 206

Query: 179 NIVLETLKVGDE 190
           NI +  +    +
Sbjct: 207 NIEIGIIGADKK 218


>gi|195381489|ref|XP_002049481.1| GJ20726 [Drosophila virilis]
 gi|194144278|gb|EDW60674.1| GJ20726 [Drosophila virilis]
          Length = 251

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 57/173 (32%), Gaps = 20/173 (11%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            + + +R    +V+  + +       ++  ARK+++L    +I  FAG +ADA  L+ R 
Sbjct: 31  GSTVGLRTKDCIVLGVEKKA-ADTLQIERTARKIKKLDDH-LIMTFAGLTADARILVNRA 88

Query: 76  EKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKT---ITLVITG 123
             + + +     R +          +L +++      R      LI          +   
Sbjct: 89  RSEAQSHRLNFERPATVEYITRYLAKLKQNYTQSNGRRPFGVSCLIGGFDADGQPHLYQT 148

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAA 170
               +  E      G  G          +S         +A +   +A+  A 
Sbjct: 149 EPSGIYYEWSANTTGRLGKTMREYLEKNVSDMASSPDDATAIKHVVRALFTAT 201


>gi|30585195|gb|AAP36870.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 2
           [synthetic construct]
 gi|61372329|gb|AAX43824.1| proteasome subunit beta type 2 [synthetic construct]
          Length = 202

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 165


>gi|162312364|ref|XP_001713040.1| 20S proteasome component alpha 3 (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|1172601|sp|Q09682|PSA4_SCHPO RecName: Full=Probable proteasome subunit alpha type-4
 gi|159883893|emb|CAA90475.2| 20S proteasome component alpha 3 (predicted) [Schizosaccharomyces
           pombe]
          Length = 248

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 11/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA   L +     +V+A + +V+      + +A K+  +G      +AG    +      
Sbjct: 30  HAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             R+ ++       E    QL+R   +L + +     LR      L A         +  
Sbjct: 90  ARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLRPFGVSFLYAGWDHIRGYQLFQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                        +IG   +   S  R       + +E +  A+ 
Sbjct: 150 SNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVK 194


>gi|167392352|ref|XP_001740117.1| proteasome subunit alpha type-2-A [Entamoeba dispar SAW760]
 gi|165895909|gb|EDR23492.1| proteasome subunit alpha type-2-A, putative [Entamoeba dispar
           SAW760]
          Length = 236

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 50/162 (30%), Gaps = 12/162 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
            +T + ++    +V+A +   SL    +  + +K+  L     +            + + 
Sbjct: 34  GSTSVGIKAKDGIVLAVEK--SLPPMYISESIQKINHLCDSVGMVSSGMGPDARVLVKKG 91

Query: 74  -------RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM 124
                   LE + +   + + R    L +++     +R     +L+A  D  +  +    
Sbjct: 92  RKEGQKYWLEYQEDINCSMMTRKLAYLMQEYTQKGGVRPFGVSVLVAGFDGKVPRLYQVD 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                      A+G   +   +            E+    A+
Sbjct: 152 PSGSFWTWKATALGKNMTSVKTFLEKRYHDDIELEDAIHTAI 193


>gi|156401589|ref|XP_001639373.1| predicted protein [Nematostella vectensis]
 gi|156226501|gb|EDO47310.1| predicted protein [Nematostella vectensis]
          Length = 255

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR + +VV+  + +            RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGNNIVVLGVERKAVAKLQ-EPRTVRKICTLDDH-VLMAFAGLTADARILVN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           +   + + +   +          R    L + +      R      LI          + 
Sbjct: 88  KARVECQSHKLTVEDPVTLEYITRFIATLKQRYTQSNGRRPFGISTLIVGFDFDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                    +  S  ++A +A+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKHYSDEVADSDESTVKLAIRAL 197


>gi|780279|emb|CAA60015.1| proteasomal subunit Pre3 [Saccharomyces cerevisiae]
          Length = 65

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 17/45 (37%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
           T+I+ V     V++  D + + G  +      K+ R+       
Sbjct: 16 GTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCC 60


>gi|195032049|ref|XP_001988430.1| GH11159 [Drosophila grimshawi]
 gi|193904430|gb|EDW03297.1| GH11159 [Drosophila grimshawi]
          Length = 222

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V++A D   +     MK +  K+ RL + +++A   G   D     + + 
Sbjct: 3   TILGIKGSNFVMLACDTMQAKSVIFMKDDQSKIHRLSEFSMLAA-VGDGGDTLQFTDYVA 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGD 126
           K L+ Y                  K L           +  ++   D    + +      
Sbjct: 62  KHLQLYRISNGYHLSPRGAAHYTRKNLADYIRTNTIYQVSMLMAGYDAIEGSDLHYIDSY 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G G  +  S  +       S  E
Sbjct: 122 GASMSINHAGHGLGSLFCGSIFQRYWREDLSQAE 155


>gi|116203057|ref|XP_001227340.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88177931|gb|EAQ85399.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 251

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPQRQFQLYL 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        + G+  + A S  +       + +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSSGANHASAQSLLKQDYKEDCTLKEACGMAVKV 195


>gi|149635265|ref|XP_001508741.1| PREDICTED: similar to proteasome subunit RC7-I [Ornithorhynchus
           anatinus]
          Length = 285

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    +++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 89  IGIQGPDYILVASD-RVAASSIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 147

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 148 VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 207

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A E+ +K ++
Sbjct: 208 LAKAPFAAHGYGAFLTLSILDRYYKPSITREEAIELLKKCLA 249


>gi|4506195|ref|NP_002785.1| proteasome subunit beta type-2 isoform 1 [Homo sapiens]
 gi|109001942|ref|XP_001109596.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Macaca
           mulatta]
 gi|296207459|ref|XP_002750652.1| PREDICTED: proteasome subunit beta type-2-like isoform 1
           [Callithrix jacchus]
 gi|296207461|ref|XP_002750653.1| PREDICTED: proteasome subunit beta type-2-like isoform 2
           [Callithrix jacchus]
 gi|332248600|ref|XP_003273452.1| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Nomascus
           leucogenys]
 gi|332808412|ref|XP_003308022.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Pan
           troglodytes]
 gi|1709762|sp|P49721|PSB2_HUMAN RecName: Full=Proteasome subunit beta type-2; AltName:
           Full=Macropain subunit C7-I; AltName:
           Full=Multicatalytic endopeptidase complex subunit C7-I;
           AltName: Full=Proteasome component C7-I
 gi|21465652|pdb|1IRU|K Chain K, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465666|pdb|1IRU|Y Chain Y, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|565649|dbj|BAA05646.1| proteasome subunit HsC7-I [Homo sapiens]
 gi|30583113|gb|AAP35801.1| proteasome (prosome, macropain) subunit, beta type, 2 [Homo
           sapiens]
 gi|48145841|emb|CAG33143.1| PSMB2 [Homo sapiens]
 gi|55663090|emb|CAC36031.2| proteasome (prosome, macropain) subunit, beta type, 2 [Homo
           sapiens]
 gi|56204210|emb|CAI23521.1| proteasome (prosome, macropain) subunit, beta type, 2 [Homo
           sapiens]
 gi|56205489|emb|CAI22074.1| proteasome (prosome, macropain) subunit, beta type, 2 [Homo
           sapiens]
 gi|60655289|gb|AAX32208.1| proteasome subunit beta type 2 [synthetic construct]
 gi|75517958|gb|AAI01837.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Homo
           sapiens]
 gi|79160069|gb|AAI07902.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Homo
           sapiens]
 gi|85397257|gb|AAI05127.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Homo
           sapiens]
 gi|119627811|gb|EAX07406.1| proteasome (prosome, macropain) subunit, beta type, 2, isoform
           CRA_a [Homo sapiens]
 gi|119627812|gb|EAX07407.1| proteasome (prosome, macropain) subunit, beta type, 2, isoform
           CRA_a [Homo sapiens]
 gi|123993727|gb|ABM84465.1| proteasome (prosome, macropain) subunit, beta type, 2 [synthetic
           construct]
 gi|208967172|dbj|BAG73600.1| proteasome (prosome, macropain) subunit, beta type, 2 [synthetic
           construct]
 gi|1091574|prf||2021261B proteasome:SUBUNIT=HsC7-I
          Length = 201

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 165


>gi|281203409|gb|EFA77609.1| proteasome subunit alpha type 7 [Polysphondylium pallidum PN500]
          Length = 230

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 59/191 (30%), Gaps = 21/191 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR   V+++  + + +        + RK+ ++     +  FAG +AD+  L+ 
Sbjct: 31  KGTVAVGVRGKDVIILGVEKKSTAKLQDA-RSIRKIVKIDDHICL-TFAGLTADSRVLIN 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           +   + + Y   L            +A   +       +    +              + 
Sbjct: 89  KALVECQSYRLSLDDVPSVEYISKYIAGIQQRYTQSGGVRPFGISTLIVGFDSDGTPKLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-STQNSA-EEIARKAMSIAADICVYTNH- 178
                         AIG                  ++A  ++A +A+    +    + + 
Sbjct: 149 QTDPSGSFSSWKAAAIGRNSKTVSEFLEKNFTDESDTASIKLAVRALLEVVE----SGNK 204

Query: 179 NIVLETLKVGD 189
           NI +  +K  +
Sbjct: 205 NIEIAIIKRNE 215


>gi|221112999|ref|XP_002166142.1| PREDICTED: similar to predicted protein isoform 2 [Hydra
           magnipapillata]
          Length = 261

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 23/175 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-----IIAGFAGSSADA 68
             +T + VR   +V +  + + S+ +       RK+  L         ++  + G +ADA
Sbjct: 30  KGSTAVGVRGTNIVALGVE-RKSVAKLQEARTVRKICPLDDHVFLAFAVLTIYIGLTADA 88

Query: 69  FTLLERLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIA---DKT 116
             L+     + + +   +               L + +     +R     +LI    D  
Sbjct: 89  RILVNAARVECQSHKLNVEDPVSLEYITRYIASLKQKYTQSNGMRPFGISMLIVGFDDDG 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
              +          E    AIG                      +S  ++A KA+
Sbjct: 149 SAHLYQTDPSGTYHEWKANAIGRSSKTVQEYLEKNYSDEEADNDDSIVKLALKAL 203


>gi|195586424|ref|XP_002082974.1| Pros28.1B [Drosophila simulans]
 gi|46254502|gb|AAS86224.1| testes-specific alpha4-t2 proteasome subunit [Drosophila simulans]
 gi|46254504|gb|AAS86225.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           melanogaster]
 gi|46254506|gb|AAS86226.1| testes-specific alpha4-t2 proteasome subunit [Drosophila
           melanogaster]
 gi|46254508|gb|AAS86227.1| testes-specific alpha4-t2 proteasome subunit [Drosophila simulans]
 gi|194194983|gb|EDX08559.1| Pros28.1B [Drosophila simulans]
          Length = 252

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 54/162 (33%), Gaps = 15/162 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R +  +V+  + + S+G    +   RK+  L    ++  F+G +ADA  L+ 
Sbjct: 30  RGSTVMGLRTNNAIVLGVEKR-SVGDLQEERMVRKICMLDDH-VVMTFSGLTADARILVS 87

Query: 74  RLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +     +            +L +++      R      L+          + 
Sbjct: 88  RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-AEEIA 162
                 +  E      G                  + A+E A
Sbjct: 148 QTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAA 189


>gi|195386816|ref|XP_002052100.1| GJ17367 [Drosophila virilis]
 gi|194148557|gb|EDW64255.1| GJ17367 [Drosophila virilis]
          Length = 231

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 14/163 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA-----GFAGSSADAFTL 71
           T+L ++    V++A D  ++     +K N  K+R +   +++A     G     AD    
Sbjct: 3   TVLGLKGKDFVMLASDTMLAKSIFFLKDNNTKIRPISSNSMMAVVGNNGDTLHFADFIAT 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKY---LRNLEAMILIADKTI--TLVITGMGD 126
              L  ++    +    + V   ++  +D     + +  AM+L    +     +      
Sbjct: 63  NISL-YEIRNGYDMDTPTVVHFTRNHILDNIRNKVSSQVAMLLAGYDSEFGPSLCFIDAQ 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                      G G     S    +     + +E   I R+ +
Sbjct: 122 GTTMPLNYSGHGLGHPICTSIFHMMWKPDLTFQEGVDIVRRCV 164


>gi|19113828|ref|NP_592916.1| 20S proteasome component beta 4 (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|1172609|sp|Q09720|PSB2_SCHPO RecName: Full=Probable proteasome subunit beta type-2
 gi|914882|emb|CAA90462.1| 20S proteasome component beta 4 (predicted) [Schizosaccharomyces
           pombe]
          Length = 194

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 41/156 (26%), Gaps = 12/156 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L V+    V+ A       G TV+K +  K + L   N +  + G + D     E +   
Sbjct: 5   LAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHN-LMLYCGEAGDTTNFAEYIAAN 63

Query: 79  LEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGDV 127
           +  Y  +   +    A                  Y  N+       +     +       
Sbjct: 64  ISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                     G    Y LS          + +E  R
Sbjct: 124 TCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVR 159


>gi|312078609|ref|XP_003141813.1| proteasome subunit alpha type 3 [Loa loa]
 gi|307763027|gb|EFO22261.1| proteasome subunit alpha type 3 [Loa loa]
          Length = 235

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 49/166 (29%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T++ +R    VV A D  ++    V  AN R         I    AG   D   LL+
Sbjct: 33  NGGTMIAIRGKDGVVTAADKLITSKLYVENANPRMANAGE--YIGCAMAGIYPDCRALLD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY-----------LRNLEAMILIADKTITLVIT 122
               +   Y  +            ++ +Y                 +    +K  + +  
Sbjct: 91  YAVSEALNYLKEYRAPIPIKKLANQLAEYVHVYTLGISRPFGASIFLTAWDEKNGSQLFL 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                L  E    AIG     A +    L       +++  +A  I
Sbjct: 151 LEPSGLCYEYKAWAIGKHRQAAKTEIEKLKFEDIPMQQLVNEAARI 196


>gi|242046736|ref|XP_002461114.1| hypothetical protein SORBIDRAFT_02g040990 [Sorghum bicolor]
 gi|241924491|gb|EER97635.1| hypothetical protein SORBIDRAFT_02g040990 [Sorghum bicolor]
          Length = 249

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 60/164 (36%), Gaps = 14/164 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  V+    +  +N R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVLGVEKLVASKMMLEGSN-RRIHSVHRHSGLA-VAGLAADGRQIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y      +        R+  Y+                ++   D+    +  
Sbjct: 91  RTKLEAASYEKVYGEAISVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-IARKA 165
                +  +    A+G G   A +    L  ++ +  E I   A
Sbjct: 151 IEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVA 194


>gi|227116345|ref|NP_036100.3| proteasome subunit beta type-2 [Mus musculus]
 gi|9910832|sp|Q9R1P3|PSB2_MOUSE RecName: Full=Proteasome subunit beta type-2; AltName:
           Full=Macropain subunit C7-I; AltName:
           Full=Multicatalytic endopeptidase complex subunit C7-I;
           AltName: Full=Proteasome component C7-I
 gi|5757657|gb|AAD50535.1|AF060090_1 proteasome subunit C7-I [Mus musculus]
 gi|14198410|gb|AAH08265.1| Proteasome (prosome, macropain) subunit, beta type 2 [Mus musculus]
 gi|122890116|emb|CAM13971.1| proteasome (prosome, macropain) subunit, beta type 2 [Mus musculus]
 gi|148698332|gb|EDL30279.1| proteasome (prosome, macropain) subunit, beta type 2 [Mus musculus]
          Length = 201

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 165


>gi|213409301|ref|XP_002175421.1| 20S proteasome component alpha 4 [Schizosaccharomyces japonicus
           yFS275]
 gi|212003468|gb|EEB09128.1| 20S proteasome component alpha 4 [Schizosaccharomyces japonicus
           yFS275]
          Length = 258

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 18/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + VR + V VI  + + +  +     +++K+  +     +A FAG +ADA  L++
Sbjct: 29  RGTTAVGVRGERVAVIGVEKK-TAAKLQNSRSSQKIGLVDDHVCLA-FAGLNADARVLID 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA-------------MILIADKTITLV 120
           +   + + Y   L            +    +                 M    + T   +
Sbjct: 87  KARVEAQSYRLNLADPVTVEYITRYVAGVQQKYTQAGGVRPFGVSTLIMGFDVNDTTPRL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                  +       AIG  G               S   A  +  K++
Sbjct: 147 FQTEPAGIYNAWKATAIGRSGKTVREFLERNWKPDMSRDEAIHLTVKSL 195


>gi|260798452|ref|XP_002594214.1| hypothetical protein BRAFLDRAFT_117625 [Branchiostoma floridae]
 gi|229279447|gb|EEN50225.1| hypothetical protein BRAFLDRAFT_117625 [Branchiostoma floridae]
          Length = 113

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 3/74 (4%)

Query: 102 YLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SA 158
              ++  MI+  DK    +     D     N + ++GSG +YA     +  S       A
Sbjct: 1   MGLSMGTMIVGWDKRGPGLYYVDSDGTRLSNNMFSVGSGSTYAYGVLDSGYSWDMGVEEA 60

Query: 159 EEIARKAMSIAADI 172
            E+ ++A+  A   
Sbjct: 61  YELGKRAIYHATHR 74


>gi|50551999|ref|XP_503474.1| YALI0E02794p [Yarrowia lipolytica]
 gi|49649343|emb|CAG79053.1| YALI0E02794p [Yarrowia lipolytica]
          Length = 253

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 49/163 (30%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + +++    +  ++  K+  + K    A  G    +       
Sbjct: 34  GSTAIGVATKDGVVLGVEKRITS-SLLEASSIEKIVEIDKHIGCAMSGLTADARTMIDHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAK---------DWRMDKYLRNLEAMILIADKTI 117
                + + Y ++      + ++  +LA          +  M +       +    D   
Sbjct: 93  RVESVQHDLYYDEPINVETVTQAVCDLALRFGEGAEGEERIMSRPFGVALLIAGYDDDHG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +  +       + EE
Sbjct: 153 AQLYHAEPSGTFYRYEAKAIGSGSEGAQAELQNEYHKDMTLEE 195


>gi|291234984|ref|XP_002737426.1| PREDICTED: proteasome alpha 8 subunit-like isoform 1 [Saccoglossus
           kowalevskii]
          Length = 256

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  L+ 
Sbjct: 31  KGSTAVGVRGKDIVVLGVE-RKSVAKLQEERTVRKICILDDH-VCMAFAGLTADARILIN 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +  S         +A+  +            L A            + 
Sbjct: 89  RARVECQSHKLTVEDSVTLEYITRFIAQLKQKYTQSNGRRPFGLSALIVGFDYDGTPHLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         A+G                   S++    ++A KA+
Sbjct: 149 QTDPSGTYHAWKANAVGRSAKTVREYLEKHYSESVASSEKETIKLAIKAL 198


>gi|85105938|ref|XP_962066.1| proteasome component PUP2 [Neurospora crassa OR74A]
 gi|28923660|gb|EAA32830.1| proteasome component PUP2 [Neurospora crassa OR74A]
          Length = 245

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 53/173 (30%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +       +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVILGVEKRVTS-TLLETSSVEKIVEIDRHIG-TAMSGLQADARSMIEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQSHAFNYNEKLRVESCTQAICDLALRFGESADGEESIMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A +  +           AE +  K + 
Sbjct: 152 PSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTLEDAETLVLKTLK 204


>gi|62751339|ref|NP_001015615.1| proteasome subunit beta type-2 [Bos taurus]
 gi|75060936|sp|Q5E9K0|PSB2_BOVIN RecName: Full=Proteasome subunit beta type-2
 gi|59858075|gb|AAX08872.1| proteasome beta 2 subunit [Bos taurus]
 gi|59858205|gb|AAX08937.1| proteasome beta 2 subunit [Bos taurus]
 gi|74354591|gb|AAI02368.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Bos taurus]
 gi|296488894|gb|DAA31007.1| proteasome subunit beta type-2 [Bos taurus]
          Length = 201

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRKCLE 165


>gi|325183433|emb|CCA17894.1| proteasome subunit alpha putative [Albugo laibachii Nc14]
          Length = 250

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 59/190 (31%), Gaps = 14/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     ++IA + +V+        N+ K  RL    I   AG    +      
Sbjct: 30  NAGSAVGILAKTGIIIAAEKKVASKLLAPAKNSGKTLRLDDHIICAVAGLTADADILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++ E          QL++S     + +      R      L A         +  
Sbjct: 90  ARLSAQRYELTYQQKQPCEQLVQSICTYKQAYTQFGGQRPFGVSFLYAGWDRHHGLQLYH 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHN 179
                        AIG+    A S  +   +   S EE   +A K M    DI V +   
Sbjct: 150 SDPSGNYGGWKATAIGANNRAAKSLLKNEYNEGCSIEEALLLAIKVMGKTMDISVPSVDK 209

Query: 180 IVLETLKVGD 189
           + L  L   +
Sbjct: 210 VELTVLSQDE 219


>gi|261205276|ref|XP_002627375.1| proteasome component Y13 [Ajellomyces dermatitidis SLH14081]
 gi|239592434|gb|EEQ75015.1| proteasome component Y13 [Ajellomyces dermatitidis SLH14081]
 gi|239611407|gb|EEQ88394.1| proteasome component Y13 [Ajellomyces dermatitidis ER-3]
 gi|327348583|gb|EGE77440.1| proteasome subunit alpha type [Ajellomyces dermatitidis ATCC 18188]
          Length = 251

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +V+A + +V+        +A K+  L    I   AG    +      
Sbjct: 30  HAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
             +  ++       E    QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEEIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFVYAGYDPLRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        ++G+  + A S  +         +E    A+ +
Sbjct: 150 SNPSGNYGGWKATSVGANNASAQSLLKQDYREDCDLKEACGMAVKV 195


>gi|149694067|ref|XP_001503726.1| PREDICTED: similar to Proteasome subunit beta type-2 (Proteasome
           component C7-I) (Macropain subunit C7-I) (Multicatalytic
           endopeptidase complex subunit C7-I) [Equus caballus]
          Length = 201

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 165


>gi|82752562|ref|XP_727351.1| proteasome subunit beta type 2 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23483153|gb|EAA18916.1| proteasome subunit beta type 2 [Plasmodium yoelii yoelii]
          Length = 195

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 43/163 (26%), Gaps = 12/163 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ ++    +++  D         +K + +       GN      GS  D     E + 
Sbjct: 3   TLIGLKGKDFIILGADTYSINSIIKLKNDDKTKFYDINGNKCLLLGGSIGDRIQFGEFIR 62

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTITLVITGMGDV 127
           K +  Y  Q   S    +  +   K L              +    DK    +       
Sbjct: 63  KNVHLYQYQNSTSLYVKSFAYFTRKNLAYYLRRNPYEVNCLIAGYDDKDGYQLYWCDYLS 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                   A G G     +          + EE   I +K   
Sbjct: 123 NMDAINKGAHGYGAYLVNAILDKYYHEDMNLEEALVIFKKCFE 165


>gi|312210410|emb|CBX90497.1| similar to proteasome subunit alpha type-5 [Leptosphaeria maculans]
          Length = 245

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATGEGVILGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVESQNHAFNYNEPLRVESCTQAICDLALRFGEGAEGEESIMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +A K + 
Sbjct: 152 PSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHKSLTLPEAEVLALKTLK 204


>gi|156053566|ref|XP_001592709.1| hypothetical protein SS1G_05630 [Sclerotinia sclerotiorum 1980]
 gi|154703411|gb|EDO03150.1| hypothetical protein SS1G_05630 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 203

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 43/153 (28%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++KA+  K R L   + +  F+G + D     E ++  
Sbjct: 5   LGITGKDFTLIAASKAAMRGATILKASDDKTRTL-NQHTLMAFSGEAGDTIQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
            + Y  +        A               +   N+  ++   D       +       
Sbjct: 64  AQLYSMRNNIDLSPSAVAHFVRGELAQSLRSRKPYNVNLLLGGVDPITDKPSLYWLDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS            E+
Sbjct: 124 SLAPLPYAAHGYAQYYCLSILDKHHHPDIDFEQ 156


>gi|8394079|ref|NP_058980.1| proteasome subunit beta type-2 [Rattus norvegicus]
 gi|730377|sp|P40307|PSB2_RAT RecName: Full=Proteasome subunit beta type-2; AltName:
           Full=Macropain subunit C7-I; AltName:
           Full=Multicatalytic endopeptidase complex subunit C7-I;
           AltName: Full=Proteasome component C7-I
 gi|436781|dbj|BAA04823.1| proteasome subunit RC7-I [Rattus sp.]
 gi|34849630|gb|AAH58487.1| Proteasome (prosome, macropain) subunit, beta type 2 [Rattus
           norvegicus]
 gi|149023966|gb|EDL80463.1| proteasome (prosome, macropain) subunit, beta type 2 [Rattus
           norvegicus]
 gi|737261|prf||1922244A proteasome:SUBUNIT=RC7-I
          Length = 201

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 165


>gi|209879145|ref|XP_002141013.1| proteasome subunit alpha type 7 [Cryptosporidium muris RN66]
 gi|209556619|gb|EEA06664.1| proteasome subunit alpha type 7, putative [Cryptosporidium muris
           RN66]
          Length = 241

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 55/163 (33%), Gaps = 17/163 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR    VV+A + + +        +A+K+  + +   +A FAG  ADA  L+ ++  +
Sbjct: 34  VGVRGVDCVVLAVERKAAAKLQ-DSRSAKKLLLVDENTCLA-FAGLHADARVLINKVRIE 91

Query: 79  LEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIAD------KTITLVITGMGD 126
            + Y   +  +      +  +A+  +   +   +    +              +      
Sbjct: 92  CQSYRLNVEDAPPVDYVARYIAQQQQKYTHKGGVRPFGISTLIAGCHVNGNPGLYQTDPS 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
            +  E    AIG              +   S   A  +A + +
Sbjct: 152 GIALEWKAQAIGQNSKTVQEFFEKNYTENLSRDDATSLAVRGL 194


>gi|296425189|ref|XP_002842125.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638384|emb|CAZ86316.1| unnamed protein product [Tuber melanosporum]
          Length = 257

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 57/191 (29%), Gaps = 16/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + S  +            L   ++   FAG +ADA  L++
Sbjct: 21  RGTCAVGVKGTSIVVLGCEKR-SAMKLQDTRITPSKIGLVDNHVCLAFAGLNADARILVD 79

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +         +  I  +
Sbjct: 80  KARLEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIIGFDPNDKIPRL 139

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-N 179
                  +       AIG                    EE  +  +    ++ V T   N
Sbjct: 140 YQTEPSGIYSAWKANAIGRSSKTVREFLERNYKEDMDREETVKLTVKSLLEV-VQTGAKN 198

Query: 180 IVLETLKVGDE 190
           I +  ++ G E
Sbjct: 199 IEIAIMEPGKE 209


>gi|308499903|ref|XP_003112137.1| CRE-PAS-5 protein [Caenorhabditis remanei]
 gi|308268618|gb|EFP12571.1| CRE-PAS-5 protein [Caenorhabditis remanei]
          Length = 258

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 57/178 (32%), Gaps = 25/178 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI---------IAGFAGSS 65
            +T + ++    V++A + + +    V      K+ ++ +               FAG  
Sbjct: 34  GSTSIGIKTSEGVLLAAEKRSTSKLMV-NDAIEKISKVDQHIGEFRRYKFENCVTFAGLI 92

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK-------------YLRNLEAMILI 112
           AD+ TL+ER + + + +     R          +                 R     +L 
Sbjct: 93  ADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLF 152

Query: 113 A--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           A  D+    +          +    +IG+    A    +       + +E  + A++I
Sbjct: 153 AGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEALKMALAI 210


>gi|308158861|gb|EFO61422.1| 20S proteasome alpha subunit 5 [Giardia lamblia P15]
          Length = 245

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 27/192 (14%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T L +R    +V A + + S    +     R +        +A  AG ++D+  LL+   
Sbjct: 34  TALAIRTHSGIVFAVERRTSSPLRLQTRFERIMHVDDH--AMACVAGHASDSKLLLQSAR 91

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL-------------RNLEAMILIADKTITLVITG 123
            + + +           A    + +                    +I   D     +   
Sbjct: 92  TEAQSHRFLYDEFVPLQALSESLSEVFINFGRGKKKLGRPFGCSLLIGGLDGNTPRLFCA 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------AEEIARKAMSIAADICVYT 176
                  E    ++G+G + A    +       +       A EI R  M          
Sbjct: 152 EPSGSVTEAMARSLGAGSTTAQQTLQDSYRDDMTLDDAKLLALEILRDVMESTVR----- 206

Query: 177 NHNIVLETLKVG 188
             N+ + T+   
Sbjct: 207 GDNVEMATISYD 218


>gi|291408818|ref|XP_002720739.1| PREDICTED: proteasome beta 2 subunit [Oryctolagus cuniculus]
          Length = 201

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D +V+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-RVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRDRAVELLRKCLE 165


>gi|116780007|gb|ABK21515.1| unknown [Picea sitchensis]
          Length = 235

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 62/163 (38%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +++ +K++ L     +  ++G   D+  L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDESSVQKIQLLTSNIGV-TYSGMGPDSRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ +QY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAQQYYKLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       A+G   + A S      +     ++    A+
Sbjct: 150 DPSGSYFSWKASAMGKNVTNAKSFLEKRYTEDMELDDAVHTAI 192


>gi|328353063|emb|CCA39461.1| 20S proteasome subunit alpha 7 [Pichia pastoris CBS 7435]
          Length = 268

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T + ++    VV+A +   +    V   N ++++ + +   +A ++G   D    + 
Sbjct: 44  NAGTSIGIKCRDGVVLAVEKIQTSKLLVAGRN-KRIQSIDRHIGVA-YSGIIPDGRHFVN 101

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   + + + +             R+  Y+             + A++   D     +  
Sbjct: 102 RGRDEAQSFKSLYKDPIKVPNLIDRVGLYVQNYTCANSVRPFGINAIVGGVDDDGAHLYM 161

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L     S ++  ++A  I
Sbjct: 162 IEPSGVYWGYCGTAIGKGRQTAKAELEKLDLPNISVKDGVKEAARI 207


>gi|149721035|ref|XP_001495379.1| PREDICTED: similar to Proteasome subunit alpha type-7-like [Equus
           caballus]
          Length = 250

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTDIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARAVVN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIAALKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +  N A ++A +A+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIANDNEAVKLAIRAL 197


>gi|158186|gb|AAA62768.1| proteasome beta-subunit [Drosophila melanogaster]
          Length = 249

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ Q       RK+  L    ++  FAG +ADA  ++ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEKK-SVAQLQEDRKVRKICMLDNH-VVMAFAGLTADARIMIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                     ++ A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRAL 197


>gi|149235418|ref|XP_001523587.1| proteasome component C1 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452566|gb|EDK46822.1| proteasome component C1 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 273

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 57/171 (33%), Gaps = 19/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    +V+A +  ++    V   N R   +    ++   ++G   D    + 
Sbjct: 33  NGGTSIGIKCKDGIVLAVEKIINSKLLVPGKNKRI--QTVDRHVGVVYSGLLPDGRHFVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE-----------AMILIADKTITLVIT 122
           R  ++ + + +             RM  Y++N             +++   D     +  
Sbjct: 91  RSREEAQSFKSIFKIPIPVPNLMDRMGIYVQNYTCYNSVRPFGVVSIVGGVDDDGPHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI-ARKAMSIAADI 172
                        A G G   A S          + EEI  ++A+ +AA I
Sbjct: 151 IEPSGSCWGYSGAATGKGRQIAKSELEK-----LNFEEITCQEAIKVAAKI 196


>gi|242024956|ref|XP_002432892.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
 gi|212518401|gb|EEB20154.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
          Length = 261

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 47/168 (27%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T++ +R    VV+A +  V+       AN R        G  + G    +       
Sbjct: 40  NSGTVIGLRCADGVVLAVEKLVTSKLYEPGANKRIFNIDKHIGMAVCGLISDARQLVDRA 99

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL------------IADKTITLV 120
            ++  K               A + R+  Y+                     +++    +
Sbjct: 100 RQIASKWRSEFGS---PIPLKALNDRLSMYIHAYTLFSAVRPFGCNIILSSYSEENGPEM 156

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  +       A G     A +    L     + +++  +A  I
Sbjct: 157 YMIDPSGVSYGYYACAGGKAKQTAKTEIEKLKFKNMNCKDLVMEAARI 204


>gi|300711230|ref|YP_003737044.1| proteasome subunit alpha [Halalkalicoccus jeotgali B3]
 gi|299124913|gb|ADJ15252.1| proteasome subunit alpha [Halalkalicoccus jeotgali B3]
          Length = 255

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 50/167 (29%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL- 72
             T  + +R +G VV+A D ++     + + +  K+ +      IA     +     +  
Sbjct: 35  RGTASIGIRTEGGVVLAVDKRI-RSPLMERTSVEKIHKADDHIGIASAGHVADARQLIDF 93

Query: 73  -------ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVITG 123
                   RL          L +   +  + +      R     ++I         +   
Sbjct: 94  ARRNAQVNRLRYGEPIGVETLTKDVTDHIQQYTQVGGARPFGVALIIGGIEDGEPRLYET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMS 167
                  E   +A+G+          A        E   E+A +A++
Sbjct: 154 DPSGTPYEWKALAVGADRGDIEDYLEANYEEAADLEGGIELALRALA 200


>gi|330804711|ref|XP_003290335.1| proteasome subunit alpha type 5 [Dictyostelium purpureum]
 gi|325079545|gb|EGC33140.1| proteasome subunit alpha type 5 [Dictyostelium purpureum]
          Length = 242

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 70/191 (36%), Gaps = 23/191 (12%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+ +  VV+A + +++    +  ++ +KV  +   ++I   +G +AD+ T+++    +
Sbjct: 35  IGVQCEEGVVLAVEKRLTS-PLLEPSSIQKVVEID-YHLICALSGLTADSRTIIDHARIE 92

Query: 79  LEQYPNQLLRSSVELAKDWRMD---------------KYLRNLEAMILIA--DKTITLVI 121
            + +           +    +                +  R     +LIA  D+    + 
Sbjct: 93  TQNHRFNYDEPMGVESCVQSICDLALRFGENRSSGEERMSRPFGVALLIAGVDEKGPSLY 152

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
                    +    AIG+G   A +  +   S   + +E   +A   +    +  + T  
Sbjct: 153 YSDPSGTFTQFNAKAIGAGSEGAQTTLQEKYSKTLTLQECQKLALTTLKQVMEEAI-TTT 211

Query: 179 NIVLETLKVGD 189
           N+ +  +   +
Sbjct: 212 NVEIAVITKAE 222


>gi|219110765|ref|XP_002177134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411669|gb|EEC51597.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 264

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 44/162 (27%), Gaps = 14/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A T + +     +V+A + +++ G       + K   L        AG    +      
Sbjct: 30  NAGTCVGILARDGIVMASERRITSGLLAPSKTSEKTYPLAAHAACNVAGLTADANILIEQ 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
                 + + Y  Q      +L +     K        LR      L A         + 
Sbjct: 90  ARLRAGRYQ-YQYQEPIPVEQLVEHVCNYKQFYTQRGGLRPFGVAFLFAGYDEHFGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                          IG+      S  +       S++++A 
Sbjct: 149 QSDPSGNYSGWKATVIGANNQAGKSILKTEYQKD-SSDDMAE 189


>gi|17933602|ref|NP_525092.1| proteasome 28kD subunit 1 [Drosophila melanogaster]
 gi|12643272|sp|P22769|PSA71_DROME RecName: Full=Proteasome subunit alpha type-7-1; AltName:
           Full=PROS-Dm28.1; AltName: Full=Proteasome 28 kDa
           subunit 1
 gi|8386|emb|CAA44174.1| 28 KDa proteasome subunit [Drosophila melanogaster]
 gi|7293190|gb|AAF48573.1| proteasome 28kD subunit 1 [Drosophila melanogaster]
 gi|17945625|gb|AAL48863.1| RE28175p [Drosophila melanogaster]
 gi|46254474|gb|AAS86210.1| alpha4 proteasome subunit [Drosophila melanogaster]
 gi|46254476|gb|AAS86211.1| alpha4 proteasome subunit [Drosophila melanogaster]
 gi|46254478|gb|AAS86212.1| alpha4 proteasome subunit [Drosophila melanogaster]
 gi|46254480|gb|AAS86213.1| alpha4 proteasome subunit [Drosophila melanogaster]
 gi|46254482|gb|AAS86214.1| alpha4 proteasome subunit [Drosophila melanogaster]
 gi|46254484|gb|AAS86215.1| alpha4 proteasome subunit [Drosophila melanogaster]
 gi|46254486|gb|AAS86216.1| alpha4 proteasome subunit [Drosophila melanogaster]
 gi|220948288|gb|ACL86687.1| Pros28.1-PA [synthetic construct]
 gi|220960436|gb|ACL92754.1| Pros28.1-PA [synthetic construct]
          Length = 249

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ Q       RK+  L    ++  FAG +ADA  ++ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEKK-SVAQLQEDRKVRKICMLDNH-VVMAFAGLTADARIMIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                     ++ A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRAL 197


>gi|66828049|ref|XP_647379.1| proteasome subunit alpha type 5 [Dictyostelium discoideum AX4]
 gi|74897478|sp|Q55G04|PSA5_DICDI RecName: Full=Proteasome subunit alpha type-5
 gi|60475787|gb|EAL73722.1| proteasome subunit alpha type 5 [Dictyostelium discoideum AX4]
          Length = 241

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 70/192 (36%), Gaps = 23/192 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+ +  VV+A + +++    +  ++ +KV  +   ++I   +G  ADA T+++    +
Sbjct: 35  IGVQCEEGVVLAVEKRLTS-PLLEPSSIQKVVEID-YHLICALSGLVADARTIIDHARIE 92

Query: 79  LEQYPNQLLRSSVELAK------------DWRMD---KYLRNLEAMILIA--DKTITLVI 121
            + +           +             + R     +  R     +LIA  D+    + 
Sbjct: 93  TQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLY 152

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH 178
                    +    AIG+G   A +  +   S   +  E   +A   +    +  + T  
Sbjct: 153 YSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYSKTLTIAECQKLALTTLKQVMEEAI-TTT 211

Query: 179 NIVLETLKVGDE 190
           N+ L  +   D+
Sbjct: 212 NVELAVITKADQ 223


>gi|302403749|ref|XP_002999713.1| proteasome subunit alpha type-4 [Verticillium albo-atrum VaMs.102]
 gi|261361469|gb|EEY23897.1| proteasome subunit alpha type-4 [Verticillium albo-atrum VaMs.102]
          Length = 251

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +A K+  +    I   AG    +      
Sbjct: 30  HAGTAIGILAQDGIVLAAERKVTSKLLEQDTSAEKLYTVNDNMICAVAGMTADANILINY 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT---LVIT 122
             +  ++            QL+R   +L + +     LR      + A         +  
Sbjct: 90  ARQAAQRYLLTYNEDIPCEQLVRRLCDLKQGYTQHGGLRPFGVSFIYAGWDPKRQFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAM 166
                        A+G+  + A S  +           A  +A K +
Sbjct: 150 SNPSGNYGGWKATAVGANRASAESLLKQDYKEDCKLTDACGLAVKVL 196


>gi|50290521|ref|XP_447692.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527002|emb|CAG60637.1| unnamed protein product [Candida glabrata]
          Length = 257

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 14/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +  K+ +L       +AG    +      
Sbjct: 31  HAGTAIGIMTSEGIVLAAERKVTSTLLEQDTSTEKLYKLNDRTTVAVAGLTADAEILINT 90

Query: 72  LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                +  L+ Y  +     L+R   ++ + +     LR      + A   D+    + T
Sbjct: 91  ARIHAQNYLKTYNEEIPVEMLVRKLSDIKQGYTQYGGLRPYGVSFIYAGYDDRYGYQLYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +++G+  S A +  +     +     A E+A K +S   D    T   
Sbjct: 151 SNPSGNYTGWKAISVGANTSAAQTLLQMDYKDEMTLDDAVELALKTLSKTTDSSSLTYDR 210

Query: 180 IVLETLKVGDE 190
           +   TLK   E
Sbjct: 211 LEFATLKKKGE 221


>gi|289742201|gb|ADD19848.1| 20S proteasome regulatory subunit alpha type PSMA3/PRE10 [Glossina
           morsitans morsitans]
          Length = 253

 Score = 52.7 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            + T++ +R    VV+A +  V+           ++  + K   +A  AG  AD   +++
Sbjct: 33  KSGTVVGLRGRDGVVLAVEKIVTS-NLYENDAGARIFTIDKNIGLA-IAGLLADGRYIVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------------ILIADKTITLVI 121
              ++   Y +Q  R+        R+  Y+                      +     + 
Sbjct: 91  IARQEAANYRHQFERTVPLKHLCERIAAYVHAYTLYSAVRPFGVSVLLSAWTEDHGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         A G     A +       T+ S E++ + A  I
Sbjct: 151 KIEPSGSSFGYFACASGKAKQQAKTEMEKFTFTEMSTEDLVQNAGKI 197


>gi|290998105|ref|XP_002681621.1| proteasome subunit alpha type 7 [Naegleria gruberi]
 gi|284095246|gb|EFC48877.1| proteasome subunit alpha type 7 [Naegleria gruberi]
          Length = 259

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 24/197 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+A + + +  +     + RK+ ++     +A FAG +ADA  L+ 
Sbjct: 29  KGSTAVGVRGTDIVVLAVE-RKTAAKLQETRSVRKIVKIDDHCALA-FAGLTADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           +     + Y  Q             +A+  +       +    +              + 
Sbjct: 87  KARLHAQSYALQFEDQVSIDYITRYIAQVQQKYTQSGGVRPFGISTLIAGFEPNGTPTLS 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN--------SAEEIARKAMSIAADIC 173
                           G               T          S E   + A+    ++ 
Sbjct: 147 QTDPSGTFSSWKANTCGRNSKTVREFLEKNYDTDILGTESTQSSEERTVKLAIKALLEV- 205

Query: 174 VYTNH-NIVLETLKVGD 189
           V +   NI +  LK  +
Sbjct: 206 VESGSKNIEVAVLKFKE 222


>gi|225709070|gb|ACO10381.1| Proteasome subunit alpha type-3 [Caligus rogercresseyi]
          Length = 255

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 14/166 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           A T + +R    VV A +  +        +N R        NI     G  +D  +L + 
Sbjct: 34  AGTAIGLRGKDGVVFAAEKIIKSKLYEPSSNPRLF--DVNRNIGCAVTGLYSDCRSLADY 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTI-TLVIT 122
             ++ +++ +Q  RS        R+  Y+                M+   D      + +
Sbjct: 92  AGREADEFLSQYGRSVPLKYLTERLGDYMHAYTLFSATQPFGANVMLCSWDAVSGPQLYS 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +      +A G     A +    +       +++ ++A  I
Sbjct: 152 IDPSGVSYGYFGVAAGKAKESAKTEIEKIPFRNMLCKDLVKEAAKI 197


>gi|195335201|ref|XP_002034263.1| GM21770 [Drosophila sechellia]
 gi|194126233|gb|EDW48276.1| GM21770 [Drosophila sechellia]
          Length = 244

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    V      K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTSEGVVLAVEKRITSPLMVPS-TVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKT-- 116
              + + +           +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAG 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +            G  AIGSG   A    +   +TQ S  E    +++ 
Sbjct: 152 QPQLWHMDPSGTFVRYGAKAIGSGSEGAEQNLQQSFTTQMSLSEAIELSLNT 203


>gi|2654064|gb|AAB87682.1| LMP2 [Danio rerio]
          Length = 141

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 10/141 (7%)

Query: 40  TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD--- 96
           +V+     K+  L    I    +GS+ADA T+ E +  +L+ +  ++    +  +     
Sbjct: 2   SVVNRVMNKLSPLHD-KIYCALSGSAADAQTIAEIVNYQLDVHSIEVEDDPLVCSAATLV 60

Query: 97  -WRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS 153
                KY   L A +++A  DK     +      L  +      GSG  Y      A   
Sbjct: 61  KNISYKYKEELSAHLIVAGWDKKGGGQVYATLSGLLTKQPFAIGGSGSFYINGFVDAEYK 120

Query: 154 TQNSAEEI---ARKAMSIAAD 171
              +  E       A+++A  
Sbjct: 121 KNMTKRECQEFVVNALTLAMG 141


>gi|289740945|gb|ADD19220.1| 20S proteasome regulatory subunit alpha type PSMA5/PUP2 [Glossina
           morsitans morsitans]
          Length = 242

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     VV+A + +++    +      K+  + +    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGVCTSEGVVLAVEKRITS-PLMEPTTVEKIVEVDRHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM--------------DKYLRNLEAMILIADKTI--T 118
              + + +           +    +                  R     IL A       
Sbjct: 92  ARVECQNHWFVYDERMSIESCAQAVSALAIQFGDSGDGGSAMSRPFGVAILFAGIEDGKP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
            +            G  AIGSG   A    +     + S
Sbjct: 152 QLWHMDPSGTYIRYGAKAIGSGSEGAQQNLQEHYVPEMS 190


>gi|255632810|gb|ACU16758.1| unknown [Glycine max]
          Length = 207

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQLLTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL R    + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYHRLYKEPIPVNQLAREVAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       A+G   S A +      +     ++    A+
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDSVHTAI 192


>gi|195584184|ref|XP_002081894.1| GD11263 [Drosophila simulans]
 gi|194193903|gb|EDX07479.1| GD11263 [Drosophila simulans]
          Length = 244

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 20/172 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    V      K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTPEGVVLAVEKRITSPLMVPS-TVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKT-- 116
              + + +           +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAG 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +            G  AIGSG   A    +   +TQ S  E    +++ 
Sbjct: 152 QPQLWHMDPSGTFVRYGAKAIGSGSEGAEQNLQQSFTTQMSLSEAIELSLNT 203


>gi|157128593|ref|XP_001655145.1| proteasome subunit beta type [Aedes aegypti]
 gi|108882209|gb|EAT46434.1| proteasome subunit beta type [Aedes aegypti]
          Length = 206

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 57/169 (33%), Gaps = 17/169 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ +R    V++A D   +    V+K +  K+ ++    ++A   G + D     E + 
Sbjct: 3   TLMGIRGPDFVMLAADCTHAHSIMVLKDDENKIYKISDNLMMATI-GEAGDRVQFTEYIS 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIAD------KTITLVITGMGD 126
           K +  Y  +        +      K    YLR+     +              +      
Sbjct: 62  KNILLYKMRNGYELGPKSAAHFTRKNLADYLRSRTPYQVNVLVGGYDEADGAQLHYIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    A G GG +  S          TQ+ A EI +K +   A+I
Sbjct: 122 ANSLPVKYAAHGYGGLFVSSILDRYHHAKITQDEAYEILKKGV---AEI 167


>gi|255544626|ref|XP_002513374.1| proteasome subunit alpha type, putative [Ricinus communis]
 gi|223547282|gb|EEF48777.1| proteasome subunit alpha type, putative [Ricinus communis]
          Length = 235

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+ +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDEASVQKIQTLTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+          I   +  
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQI---SGK 206

Query: 179 NIVLETLKVGDE 190
           NI +  +    +
Sbjct: 207 NIEIGIIGADKK 218


>gi|195380585|ref|XP_002049051.1| GJ20973 [Drosophila virilis]
 gi|194143848|gb|EDW60244.1| GJ20973 [Drosophila virilis]
          Length = 199

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 66/172 (38%), Gaps = 24/172 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
            + ++ V  D  +V+A +   S+G  +              +I  G + +  D  +L+E 
Sbjct: 22  GSVMVGVLFDDGIVLAIN---SMGNLI---------YYLDDHIYCGASSTGFDRESLMEV 69

Query: 74  --RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
             +LE       N+ +  +  L    ++ + +   E ++   D +   +I          
Sbjct: 70  STKLENIARNNSNKGVTVAQALDLIVKLYEQVEIAELLLAGEDPSGLHLIALKCPGTSAR 129

Query: 132 NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA------DICV 174
               A+G G + +    ++      +   AE++AR A+ I +      D+C+
Sbjct: 130 VNYAALGPGSAASSEYLKSQWRPDMNLKHAEQLARAALLIGSMSKVGVDVCI 181


>gi|169601414|ref|XP_001794129.1| hypothetical protein SNOG_03572 [Phaeosphaeria nodorum SN15]
 gi|160705926|gb|EAT88777.2| hypothetical protein SNOG_03572 [Phaeosphaeria nodorum SN15]
          Length = 203

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 41/153 (26%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++KA   K R L     +  F+G + D     E ++  
Sbjct: 5   LGITGKDFTLIASSKAAMRGATILKAEDDKTRALNTHT-LMTFSGEAGDTVQFAEFIQAN 63

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK--TITLVITGMGDV 127
           ++ Y  +        A               +    +  ++   D       +       
Sbjct: 64  IQLYSMRNGMELSPAATANFVRGELATALRSRRPYTVNLLLGGYDSIADKPTLYWIDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS            E+
Sbjct: 124 SLAPVPYAAHGYAQYYCLSLLDKHHHPDIDYEQ 156


>gi|67539404|ref|XP_663476.1| hypothetical protein AN5872.2 [Aspergillus nidulans FGSC A4]
 gi|40739191|gb|EAA58381.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
 gi|259479965|tpe|CBF70666.1| TPA: alpha subunit of the 20S proteasome (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 246

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +L+E 
Sbjct: 34  GSTAIGVATSEGVILGVEKRVTS-TLLEASSVEKIVEIDQHIGCA-MSGLQADARSLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVETQNHAFHYAEPLRVESCTQAICDLALRFGETGDDEESVMSRPFGVALLIAGIDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 204


>gi|326437648|gb|EGD83218.1| Psma7 protein [Salpingoeca sp. ATCC 50818]
          Length = 251

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 51/159 (32%), Gaps = 15/159 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             TT + +R    VV+A + + S  +       RK+  +     +A FAG +ADA  L+ 
Sbjct: 28  KGTTAVGIRGKDCVVLAVERR-SAMKLQDTRTVRKIASIDDHIAVA-FAGLTADARVLVN 85

Query: 74  RLEKKLEQY-----------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT-ITLVI 121
           +   + + +                 ++ +        +    + A+I+  D      + 
Sbjct: 86  KARVESQSHRLTVEDAPTVEYMTRFIAATKQTYTQSNGRRPFGVSALIVGFDPDGTPRLF 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                         AIG G            +  + A E
Sbjct: 146 QTEPSGNYSAWKANAIG-GPRAKTCREYLEKNFTDEAVE 183


>gi|294931563|ref|XP_002779937.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
 gi|239889655|gb|EER11732.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
          Length = 249

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 51/175 (29%), Gaps = 18/175 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + V     V++AG+ +           + K+  +    +   AG    +      
Sbjct: 30  NAGSTVGVLGKQCVILAGEKKTISKLLESGKASEKIYPIDDHVVCAVAGITSDANVLINQ 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L    ++            +L+ S  ++ + +     LR      L A         +  
Sbjct: 90  LRLSAQRYRYSYQEPVPVEKLVTSICDVKQQYTQFGGLRPFGVSFLFAGYDDHYGFQLYH 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE----IAR---KAMSIAA 170
                        AIG     A    +       S +E    +A+   K+M  A 
Sbjct: 150 TDPSGNLSGWKATAIGVNNQTAQGILKTDWHEDMSTKECLDLVAKVLVKSMDTAT 204


>gi|332029633|gb|EGI69522.1| Proteasome subunit alpha type-4 [Acromyrmex echinatior]
          Length = 470

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 61/192 (31%), Gaps = 17/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  +++A + + +         + K+ +L    +    AG ++DA  L  
Sbjct: 243 HAGTCLGILANDGILLAAEKRNTNKLLDEVFFSEKIYKLNDDIV-CSVAGITSDANVLTN 301

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q   +            + + +      R     IL           + 
Sbjct: 302 ELRLIAQRYLLQYGEAIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKYYGYQLY 361

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTN 177
                          IG+  + A+S+ +            A  +A K +S   D+   T 
Sbjct: 362 QSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKEGETTLKDAMALAIKVLSKTLDMNKLTA 421

Query: 178 HNIVLETLKVGD 189
             + +  L   D
Sbjct: 422 EKVEMAILTRED 433


>gi|289617758|emb|CBI61481.1| unnamed protein product [Sordaria macrospora]
          Length = 209

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 41/150 (27%), Gaps = 12/150 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++KA+  K R L K   +  F+G + D     E ++  
Sbjct: 11  LGITGKDFTIIAASKAAMRGATILKASDDKTRSLNKHT-LMAFSGEAGDTVQFAEYIQAN 69

Query: 79  LEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGDV 127
            + Y  +        A                  Y  NL    +        +       
Sbjct: 70  AQLYSMRNETDLSPSALAHFVRGELATSLRSRKPYNVNLLLGGVDPITHKPSLYWLDYLA 129

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS 157
              E    A G    Y LS          +
Sbjct: 130 SLAEVPYAAHGYAQYYCLSILDKHHHPDIT 159


>gi|156371095|ref|XP_001628601.1| predicted protein [Nematostella vectensis]
 gi|156215582|gb|EDO36538.1| predicted protein [Nematostella vectensis]
          Length = 254

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 39/164 (23%), Gaps = 9/164 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + +R    VV   +  V        AN R        G  IAG    S       
Sbjct: 33  NSGTAIAIRCKDGVVFGVEKLVLSKLYEYGANKRIFHIDTHIGMAIAGLIADSRQIVATA 92

Query: 73  ERLEKKLE--------QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
                                   S    A              M+         + T  
Sbjct: 93  REEAANYRSVYGSPIPLKYLVNRVSGFIHAFTLYSAMRPFGCSIMLSSMGPDGPELYTID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +       AIG     A +    L  ++ + +E  ++   I
Sbjct: 153 PSGVSYGYHGCAIGKAKQNAKTEIEKLKMSEMTCQEAVKEVAKI 196


>gi|320580947|gb|EFW95169.1| Alpha 5 subunit of the 20S proteasome [Pichia angusta DL-1]
          Length = 253

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 21/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     V++  + +V+    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGICTSEGVILGVEKRVTS-SLLESDSIEKIMEIDRHIGCAMSGLTADARSMIDHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIA---DKTI 117
                + + Y ++      L +S  +LA               R     +LIA   D   
Sbjct: 93  RVASVQHDLYYHEKIGVESLTQSVCDLALRFGEGASGEKRLMSRPFGVALLIAGYDDDKG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A +  +           AE +A K + 
Sbjct: 153 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTLADAEVLALKILK 205


>gi|198469729|ref|XP_001355106.2| GA17441 [Drosophila pseudoobscura pseudoobscura]
 gi|198147007|gb|EAL32162.2| GA17441 [Drosophila pseudoobscura pseudoobscura]
 gi|295987073|gb|ADG64956.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987075|gb|ADG64957.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987077|gb|ADG64958.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987079|gb|ADG64959.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987081|gb|ADG64960.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987083|gb|ADG64961.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987085|gb|ADG64962.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987087|gb|ADG64963.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987089|gb|ADG64964.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987091|gb|ADG64965.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987093|gb|ADG64966.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
 gi|295987095|gb|ADG64967.1| proteasome 28kD subunit 1 [Drosophila pseudoobscura]
          Length = 249

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L     +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGGSCVVLGVEKK-SVAKLQEDRTVRKICMLDHHITMA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDQVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDGDGSAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T+  A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKTVREFFEKNYREEDVATEKGAVKLAVRAL 197


>gi|332019371|gb|EGI59872.1| Proteasome subunit alpha type-7-1 [Acromyrmex echinatior]
          Length = 249

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + S+ +   +   RK+  L    +I  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGADVVVLGVEKK-SVAKLQEERTVRKICLLDDH-VIMAFAGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +               L + +      R      L+A         + 
Sbjct: 88  RAQVECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLLAGFDYDGVPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                   ST+    ++A +A+
Sbjct: 148 QTEPSGIYYEWKANATGRSAKTVHEFLEKYYTPEEVSTEKGCIKLAIRAL 197


>gi|322828019|gb|EFZ31974.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
          Length = 206

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 50/165 (30%), Gaps = 19/165 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA----DAFTLL 72
           T +  R +G V++A  G  +     +     KV +L    ++A    +        +   
Sbjct: 4   TTIAFRCNGFVLVAAAGLNAFYYIKIMDTEDKVTQLDSHKVVACAGENGPRVNFVEYIKC 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------------DKTI 117
               K++ ++   +  S+        +   LR+ +   L+                  T 
Sbjct: 64  NMALKRMREHGRVIRTSAAASFMRNALAGALRSRDGAYLVNCLLAGYDVAASSDDDIATG 123

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +          E      G G S+ ++    L     +A+E  
Sbjct: 124 PHLYYMDYLGTMQEVPYGCHGYGASFVIAMLDRLWRPDLTAQEAV 168


>gi|147779267|emb|CAN70088.1| hypothetical protein VITISV_038170 [Vitis vinifera]
          Length = 226

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 62/163 (38%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+ +K++ L     +  ++G   D+  L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDEASVQKIQVLTPNIGVV-YSGMGPDSRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYHRLYKESIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       A+G   S A +      +     ++    A+
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAI 192


>gi|326526665|dbj|BAK00721.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 263

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 61/193 (31%), Gaps = 17/193 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +     +++A + + +       + + K+ +L    +    +G ++DA  L+ 
Sbjct: 30  HAGTSLGILASDGILLAAEKRNTNKLLDEVSYSEKIYKLNDD-LCCSVSGITSDANVLIN 88

Query: 74  RLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q                + + +      R     IL           + 
Sbjct: 89  ELRLIAQRYFLQYQEPIPSENLVANLCNIKQAYTQFGGKRPFGVSILYMGWDKQFGYQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTN 177
                          IG+    A+S  +            A  +A K +S   D    T+
Sbjct: 149 QSDPSGNYGGWKATCIGNNNQTAISILKQEYKIDETKLTDALRLAIKILSKTLDTTKLTS 208

Query: 178 HNIVLETLKVGDE 190
             I + TL   ++
Sbjct: 209 DKIEIATLTREND 221


>gi|260830465|ref|XP_002610181.1| hypothetical protein BRAFLDRAFT_264234 [Branchiostoma floridae]
 gi|229295545|gb|EEN66191.1| hypothetical protein BRAFLDRAFT_264234 [Branchiostoma floridae]
          Length = 255

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 45/165 (27%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + +R    VV A +  V        AN R        G  +AG    +     + 
Sbjct: 33  NSGTAVGIRGKDGVVFAVEKLVQSKLYEAGANKRIFNIDRHIGMAVAGLLADARQISEIA 92

Query: 73  ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITG 123
                              L          + +  ++R     +++          +   
Sbjct: 93  RDEASNFRYNYGGDIPCKNLADRVAMYMHAYTLYSHVRPFGCSVMLGSYNKDDGPQLYMM 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L     S +++ ++A  I
Sbjct: 153 DPSGVHWGYYGCAIGKARQAAKTEIEKLKMADQSCKDLVKEAAKI 197


>gi|45198776|ref|NP_985805.1| AFR258Wp [Ashbya gossypii ATCC 10895]
 gi|44984786|gb|AAS53629.1| AFR258Wp [Ashbya gossypii ATCC 10895]
          Length = 262

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 44/104 (42%), Gaps = 3/104 (2%)

Query: 6   DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
                + +  T+++ ++ +   +IA D   S G  +   +  ++  +G+  ++ G +G  
Sbjct: 31  HTQQPI-VTGTSVIAMKYNNGTIIAADRLGSYGSLLRFTDMDRLFAVGESTVV-GVSGDV 88

Query: 66  ADAFTLLERLE-KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA 108
           +D   L   L+  ++E   +       E  K   + +YL +L  
Sbjct: 89  SDMQYLQRLLQDMEIENNYDNSHADGAEALKPSYIFEYLASLMY 132


>gi|321254353|ref|XP_003193046.1| proteasome subunit beta type 2 [Cryptococcus gattii WM276]
 gi|317459515|gb|ADV21259.1| proteasome subunit beta type 2, putative [Cryptococcus gattii
           WM276]
          Length = 224

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 43/152 (28%), Gaps = 12/152 (7%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +     V++A D         MK++  K++ LG    +A F+G   D     E +E+ +
Sbjct: 6   GITGKDYVILASDMGAGRSIIRMKSDENKLKTLGPHLAMA-FSGEPGDTNNFAEYIERNM 64

Query: 80  EQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
             Y  +     +  A                  Y  NL         +   +        
Sbjct: 65  RLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLGT 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           +      A G G   +LS             E
Sbjct: 125 KAVVPYAAHGMGVYVSLSTMDKWWYEDMDKRE 156


>gi|58265266|ref|XP_569789.1| proteasome subunit beta type 2 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134109223|ref|XP_776726.1| hypothetical protein CNBC2170 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|17380194|sp|Q00826|PSB2_CRYNE RecName: Full=Probable proteasome subunit beta type-2
 gi|845293|gb|AAB06582.1| putative proteasome subunit [Cryptococcus neoformans]
 gi|50259406|gb|EAL22079.1| hypothetical protein CNBC2170 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226021|gb|AAW42482.1| proteasome subunit beta type 2, putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 224

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 15/161 (9%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +     V++A D         MK++  K++ LG    +A F+G   D     E +E+ +
Sbjct: 6   GITGKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMA-FSGEPGDTNNFAEYIERNM 64

Query: 80  EQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
             Y  +     +  A                  Y  NL         +   +        
Sbjct: 65  RLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLGT 124

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
           +      A G G   +LS            +E   + RK +
Sbjct: 125 KAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCI 165


>gi|17380220|sp|Q9P6U7|PSB2_NEUCR RecName: Full=Probable proteasome subunit beta type-2
 gi|7635833|emb|CAB88637.1| probable multicatalytic endopeptidase complex chain PRE1
           [Neurospora crassa]
          Length = 203

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 42/150 (28%), Gaps = 12/150 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++KA+  K R L K   +  F+G + D     E  +  
Sbjct: 5   LGITGKDFTIIAASKAAMRGATILKASDDKTRSLNKHT-LMAFSGEAGDTVQFAEYTQAN 63

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
            + Y  +        A               +   N+  ++   D       +       
Sbjct: 64  AQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLLLGGVDPITHKPSLYWLDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS 157
              +    A G    Y LS          +
Sbjct: 124 SLAKVPYAAHGYAQYYCLSILDKHHHPDIT 153


>gi|168012536|ref|XP_001758958.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690095|gb|EDQ76464.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 237

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 15/167 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     V++A +  V+    +   +  K+  +      A  +G +ADA TL+E 
Sbjct: 35  GSTAIGLLTREGVILAVEKVVTS-PLLETKSIEKIVMIDDCIGCA-MSGLTADARTLMEH 92

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK-----------YLRNLEAMILIA--DKTITLVI 121
              + + +      +    +    +               R   A +LIA  D     + 
Sbjct: 93  GRVETQNHRFSYNEAMSVESTTQALCNLALKFGEGDESMSRPFGASLLIAGHDDHGPALF 152

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                    E    AIGSG   A  A         S  E    A+SI
Sbjct: 153 HTDPSGSYWETSAKAIGSGSEGADQALIDQYDRNMSLVEAETLALSI 199


>gi|321456911|gb|EFX68008.1| hypothetical protein DAPPUDRAFT_231772 [Daphnia pulex]
          Length = 257

 Score = 52.3 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 63/192 (32%), Gaps = 17/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +     +V+A + + +         + K+ +L   +++   AG ++DA  L  
Sbjct: 30  HAGTCLGILASDGIVLAAERRNTNKLLDEVFFSEKIYQL-NADMVCSVAGITSDANVLTN 88

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q   S            + + +      R     +L A         + 
Sbjct: 89  ELRLISQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFGVSLLYAGWDHQYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS----AEEIARKAMSIAADICVYTN 177
                          IG+  + A+S  +       +    A  +A + MS   D    T 
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAVSMLKQEYKEGETNLEEALALAIRVMSKTMDATKLTP 208

Query: 178 HNIVLETLKVGD 189
             + L TL   D
Sbjct: 209 DKLELATLTRHD 220


>gi|19075540|ref|NP_588040.1| 20S proteasome component alpha 7, Pre10 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|12229898|sp|O59770|PSA3_SCHPO RecName: Full=Probable proteasome subunit alpha type-3
 gi|3080509|emb|CAA18639.1| 20S proteasome component alpha 7, Pre10 (predicted)
           [Schizosaccharomyces pombe]
          Length = 253

 Score = 52.3 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 56/166 (33%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A+T + ++ +  V++A +  V+  + +      ++  + +   IA   G   D   +++
Sbjct: 32  NASTCIGIKCEDGVILALEKVVTS-KLLKPRVNNRIGSVDRHIGIAT-TGFIPDGQHIVK 89

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   +   + +             R+  Y+             + + +   D     +  
Sbjct: 90  RARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEGPHLYM 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              + +       A G G   A +    L  +    ++  ++A  I
Sbjct: 150 VEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEAARI 195


>gi|299116799|emb|CBN74912.1| proteasome subunit [Ectocarpus siliculosus]
          Length = 249

 Score = 52.3 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 50/167 (29%), Gaps = 13/167 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A T + +     +++A + +V          + K  RL +    ++AG    +      
Sbjct: 30  NAGTCVGILAKDGIIMAAERKVVSKLLAPSKTSEKTYRLYENASCVVAGLTADANLLVN- 88

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VI 121
             R+  +   Y         +L K+    K        LR      L           + 
Sbjct: 89  HARVSAQRYLYQYGEQMPLEQLVKEVCNYKQAYTQFGGLRPFGVSFLFTGWDEHHGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                         AIG+      +  +     ++S +E  + A+ +
Sbjct: 149 HSDPSGNYGGWKATAIGANNQAGKALLKTDYVEESSVDECLKLAVKV 195


>gi|156082632|ref|XP_001608800.1| proteasome alpha 5 subunit [Babesia bovis T2Bo]
 gi|154796050|gb|EDO05232.1| proteasome alpha 5 subunit, putative [Babesia bovis]
          Length = 250

 Score = 52.3 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 62/196 (31%), Gaps = 24/196 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T L +     V+ A + +V+    +   +  K+  +         +G  ADA TL++ 
Sbjct: 34  GSTALAIATKEGVIFASEHRVNS-PLMESVSLEKIMEIDTHIG-CTMSGLIADARTLIDH 91

Query: 75  LEKKLEQYPNQLL-----RSSVELAKDWRMD-----------KYLRNLEAMILIA--DKT 116
              +   +          RS VE   D  +D              R     +L+   D  
Sbjct: 92  GRLECANHRFVYNEPLAIRSCVESIADMALDFSDIFDTRKKKTMSRPFGVALLVGGIDID 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADIC 173
              +          +    AIGS    A S  +       S   AE +  + +       
Sbjct: 152 GPSIWCVDPSGTSIKYKASAIGSAQEGAESVLQERYRDDMSFRDAELLVLEVLRQVMK-D 210

Query: 174 VYTNHNIVLETLKVGD 189
             T  NI +  +K+ D
Sbjct: 211 QMTTKNIEMARIKIHD 226


>gi|146412023|ref|XP_001481983.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
 gi|146393490|gb|EDK41648.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 248

 Score = 52.3 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 55/170 (32%), Gaps = 17/170 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    +V+A +   +    V   N ++++ + +   +A ++G   D    + 
Sbjct: 33  NGGTSIGLKCKDGIVLAVEKITNSKLLVPGKN-KRIQTIDRHIGVA-YSGLLPDGRHFVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   + + + +             R+  Y+             +  ++   D     +  
Sbjct: 91  RGRDEAQSFKSIFKNRISVPHLMDRLGIYVQNYTCYNSVRPFGIVGIVGGVDDNGPHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                        A G G   A S    L     +     R+A+ +AA I
Sbjct: 151 IEPSGTCWGYTGAATGKGRQIAKSELEKLDFETLT----VREAVKVAAKI 196


>gi|308799543|ref|XP_003074552.1| RNA helicase (ISS) [Ostreococcus tauri]
 gi|116000723|emb|CAL50403.1| RNA helicase (ISS) [Ostreococcus tauri]
          Length = 1934

 Score = 52.3 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 47/167 (28%), Gaps = 16/167 (9%)

Query: 14   HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T  + VR    VV+  + +            RK++ L     +A FAG +ADA  L+ 
Sbjct: 1312 KGTLAVGVRGKDCVVLGVERKAVPKLQ-DTRTIRKIQMLDDHVAVA-FAGLTADARILIN 1369

Query: 74   RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------------LIADKTITLVI 121
            R   + + +   L  ++        +    +                    + +    + 
Sbjct: 1370 RARTECQSHRLTLEDAASVEYIARYVGGVQQKYTQSGGVRPFGLSTLISGFSPEGKPQLF 1429

Query: 122  TGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAM 166
                     +    AIG                 +   A +   KA+
Sbjct: 1430 HTDPSGTYSQWKANAIGRNAKSVREWLEKHYDEFSGEDAIKFTLKAL 1476


>gi|41352543|gb|AAS01024.1| proteasome alpha subunit [Ornithodoros moubata]
          Length = 241

 Score = 52.3 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    +      K+  +      A  +G  AD+ T++++
Sbjct: 34  GSTAIGIQTSEGVVLAVEKRVTS-PLMEPTTIEKIVEIDTHIACA-VSGLMADSRTMVDK 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
              + + +           +    +                  R     IL A  D    
Sbjct: 92  ARVEAQNHRFVYNEDMQVESVAQAVSNLAIQFGDSDDDGNAMSRPFGVAILFAGHDAKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +          +    AIGSG   A  A +          E  ++A+ I
Sbjct: 152 QLYHMDPSGTYVQYNAKAIGSGCEGAQQALQEKYHRSIFLAEATKEALII 201


>gi|170049221|ref|XP_001854661.1| proteasome subunit alpha type [Culex quinquefasciatus]
 gi|167871080|gb|EDS34463.1| proteasome subunit alpha type [Culex quinquefasciatus]
          Length = 276

 Score = 52.3 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 22/171 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    +      K+  + +    A  +G  AD+ TLL+R
Sbjct: 68  GSTAIGICTQEGVVMAVEKRITS-PLMEPTKVEKIVEVDRHIGCAT-SGLMADSRTLLDR 125

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIADKTI--T 118
              + + +           +    +                  R     IL A       
Sbjct: 126 ARVECQNHWFVYNERMTVESCAQAVSSLAIQFGDSDDTGSAMSRPFGVAILFAGIENGEP 185

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
            +               AIGSG   A    +       +     ++A+++A
Sbjct: 186 QLWHMDPSGTYIRYDAKAIGSGSEGAQQNLQEYYLQTMT----IKEAINLA 232


>gi|124505797|ref|XP_001351012.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
 gi|23510655|emb|CAD49040.1| beta3 proteasome subunit, putative [Plasmodium falciparum 3D7]
          Length = 204

 Score = 52.3 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 49/194 (25%), Gaps = 28/194 (14%)

Query: 21  VRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           +     V IA D ++     T +     K+ ++   N+  G +G + D  TL E L  ++
Sbjct: 1   MSGSNCVAIACDLRLGANTFTTVSTKFSKIFKM-NNNVYVGLSGLATDIQTLYEILRYRV 59

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV------------------- 120
             Y  +             +   L +        +  +                      
Sbjct: 60  NLYEVRQDAEMDVECFANMLSSILYSNRFSPYFVNPIVVGFKLKHYVDEEGEKKVNYEPY 119

Query: 121 ---ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAMSIAADICV 174
                 +G   E  +  +  G           +L           E   + +  A D   
Sbjct: 120 LTAYDLIGAKCETRD-FVVNGVTSEQLFGMCESLYVKDQDENGLFETISQCLLSALDRDC 178

Query: 175 YTNHNIVLETLKVG 188
            +     +  L   
Sbjct: 179 ISGWGAEVLVLTPE 192


>gi|296415892|ref|XP_002837618.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633494|emb|CAZ81809.1| unnamed protein product [Tuber melanosporum]
          Length = 245

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V+I  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATGYGVIIGVEKRVTS-PLLEASSVEKIVEIDRHLGCA-MSGLQADARSMIEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVEAQNHSFHYNEPLRVESCTQAICDLALRFGEGADGEESIMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +    +  +   AE +  K + 
Sbjct: 152 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHSSLTLEEAETLVLKTLK 204


>gi|156553324|ref|XP_001601425.1| PREDICTED: similar to proteasome beta-subunit [Nasonia vitripennis]
          Length = 248

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + S+ +   +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 29  KGSTAVGVRGSDVVVLGVEKK-SVAKLQEERTVRKICLLDDH-VVMAFAGLTADARVLIN 86

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R    L + +      R      L+A         + 
Sbjct: 87  RAQIECQSHKLTVEDPVTLEYITRFMASLKQKYTQSNGRRPFGISCLLAGFDYDGVPHLY 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                   ST     ++A +A+
Sbjct: 147 QTEPSGIYYEWKANATGRNAKTVKEFLEKYYTPEEVSTDKGTIKLAIRAL 196


>gi|284164986|ref|YP_003403265.1| proteasome endopeptidase complex, subunit alpha [Haloterrigena
           turkmenica DSM 5511]
 gi|284014641|gb|ADB60592.1| proteasome endopeptidase complex, alpha subunit [Haloterrigena
           turkmenica DSM 5511]
          Length = 256

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR    VV+A D +V     +  ++  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGTASIGVRTSDGVVLAVDKRVPS-PLLEDSSVEKIHKADDHIGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIAD--KTITLVIT 122
              ++ +    +         L +   +  + +      R     +++         +  
Sbjct: 93  FARRQTQVNQLRYGEPIGVETLTKEVTDHIQQYTQVGGARPFGVALIVGGIQNGEPRLFE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSI 168
                   E   +A+G+               +   +    +A  A++ 
Sbjct: 153 TDPSGTPYEWKALAVGADRGELQDYLEENYDEEADLDGGIALALDALAS 201


>gi|254571635|ref|XP_002492927.1| Alpha 7 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|238032725|emb|CAY70748.1| Alpha 7 subunit of the 20S proteasome [Pichia pastoris GS115]
          Length = 257

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T + ++    VV+A +   +    V   N ++++ + +   +A ++G   D    + 
Sbjct: 33  NAGTSIGIKCRDGVVLAVEKIQTSKLLVAGRN-KRIQSIDRHIGVA-YSGIIPDGRHFVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   + + + +             R+  Y+             + A++   D     +  
Sbjct: 91  RGRDEAQSFKSLYKDPIKVPNLIDRVGLYVQNYTCANSVRPFGINAIVGGVDDDGAHLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L     S ++  ++A  I
Sbjct: 151 IEPSGVYWGYCGTAIGKGRQTAKAELEKLDLPNISVKDGVKEAARI 196


>gi|213408599|ref|XP_002175070.1| proteasome subunit alpha type-5-B [Schizosaccharomyces japonicus
           yFS275]
 gi|212003117|gb|EEB08777.1| proteasome subunit alpha type-5-B [Schizosaccharomyces japonicus
           yFS275]
          Length = 247

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 58/173 (33%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V+    V++  + +++    +  ++  K+  +      A  +G +ADA T+++ 
Sbjct: 34  GSTAIGVKTKEGVILGVEKRLTS-SLMESSSVEKLIEIDTHIGCA-ISGLTADARTIVDH 91

Query: 75  LEKKLEQYPNQ---------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTI 117
              + + +              ++  +LA         + R+      +  +I   D+  
Sbjct: 92  ARVQTQNHRFTYDEPQGIESTTQAICDLALRFGEGADGEERIMSRPFGVALLIAGIDEHG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +               AIGSG   A S              AE +  K + 
Sbjct: 152 PQLYHTEPSGTYFRYDAKAIGSGSEGAQSELVKEYYKDITLRDAEVLVLKVLR 204


>gi|195342039|ref|XP_002037609.1| GM18352 [Drosophila sechellia]
 gi|194132459|gb|EDW54027.1| GM18352 [Drosophila sechellia]
          Length = 211

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 46/163 (28%), Gaps = 14/163 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL V+    V++A D  +S     +     +  R+  G  +   AG   D     + ++
Sbjct: 3   TILGVKGTDFVILASDTMMSKSGMWLDDEVERTNRI-SGCCMMSTAGDGGDCLQFSDFIQ 61

Query: 77  KKLEQYPNQLLRSSVELAK---------DWRMDKYLRNLEAMILIAD-KTITLVITGMGD 126
           + ++ Y                       +R       +  ++   D  +   +      
Sbjct: 62  RNMDLYKVTNGYDLTVRGAVHFIRSQLTAYRKSNCNFKVALLVGGYDLSSGPELHYMDYF 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                      G G ++                 A ++ +K +
Sbjct: 122 GNSVPVRYGGHGIGINFCTPIIEEFYKPDMDTQAAYDVIKKCV 164


>gi|313126204|ref|YP_004036474.1| 20S proteasome subunit (alpha or beta) [Halogeometricum borinquense
           DSM 11551]
 gi|312292569|gb|ADQ67029.1| 20S proteasome subunit (alpha or beta) [Halogeometricum borinquense
           DSM 11551]
          Length = 247

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 26/187 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + +R    VV+    + S    +   +  K+ +L      A  +G  ADA  L++
Sbjct: 34  RGAPSVGIRTADGVVLGAQRRTSS-SLMEAESIEKIHKLDSYLG-AASSGHVADARQLVD 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN---------------LEAMILIADKTIT 118
              ++ +    +   +         +   ++                +  M    D    
Sbjct: 92  DAREESQVNHLRYGEAIGVETLAKTLSDMIQESTQRGGTRPFGASLLIGGMDGEDDDAQP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSI------A 169
            +          E   +AIGS             S++        +A +A+++      A
Sbjct: 152 RLFQTDPSGAPHEWKAVAIGSNRGDIQEFLEDEWSSELALSDGVSLAVRALAVPDDEIEA 211

Query: 170 ADICVYT 176
           AD+ + T
Sbjct: 212 ADLSIVT 218


>gi|126132438|ref|XP_001382744.1| hypothetical protein PICST_55763 [Scheffersomyces stipitis CBS
           6054]
 gi|126094569|gb|ABN64715.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 194

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 43/154 (27%), Gaps = 11/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA---------GFAGSSADA 68
           IL +R     +IA     + G +++K    K R L K N++A          FA      
Sbjct: 4   ILGIRVADGTIIATSKAATRGISILKDTDDKTRVLNKHNLVAYTGESGDTVQFAEYVQAN 63

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--KTITLVITGMGD 126
             L    E  +E  P                 +    +  +I   D       +      
Sbjct: 64  IQLYSMRENDIELSPKATASFVRNQLATSIRSRKPYQVNVLIGGYDTKSNTPSLNWIDYL 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             + E    A G    YA S            E+
Sbjct: 124 GTQVELPYGAHGYAAFYANSLLDKHYKKNMDVEQ 157


>gi|320586045|gb|EFW98724.1| proteasome component pre6 [Grosmannia clavigera kw1407]
          Length = 269

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 52/169 (30%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   VVV+  + + ++     +    K+  L +   +A FAG +ADA  LL+
Sbjct: 30  RGTCAVGVKGSDVVVLGCEKRSAMKLQDTRITPSKIGLLDRHACLA-FAGLNADARILLD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 89  KARLEAQSHRLTVEDPVTIEYITKYIAGVQQRYTQSGGVRPFGISTLIVGFDKGSNVPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++A K++
Sbjct: 149 YQTEPSGIYSAWRANAIGRSSKTVREFLERNYKEDMDREQTIQLAIKSL 197


>gi|225423722|ref|XP_002278126.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297737956|emb|CBI27157.3| unnamed protein product [Vitis vinifera]
          Length = 235

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 62/163 (38%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+ +K++ L     +  ++G   D+  L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDEASVQKIQVLTPNIGVV-YSGMGPDSRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYHRLYKESIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       A+G   S A +      +     ++    A+
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAI 192


>gi|145539217|ref|XP_001455303.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124423102|emb|CAK87906.1| unnamed protein product [Paramecium tetraurelia]
          Length = 232

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 54/191 (28%), Gaps = 21/191 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +++  + + +     +K   +KV +L    +   F+G +ADA  L  
Sbjct: 28  RGLCCVGVRGKDAIILGVEKKATSKLQDVK-TIKKVYQLDHN-LCMTFSGLNADARILAN 85

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           +   + +QY                  +               +  +I         +  
Sbjct: 86  QTRLQCQQYKIYYEDDPSVDFIAKFTSQQQQKFTQRGGARPYGISTLIAGFSNNKPKLFQ 145

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH- 178
                   E    ++G                    ++   +  KA+    +    + + 
Sbjct: 146 TDPSGACSEWKATSLGKSAKQVKDFLEKHWREGLHEKDALLLTTKALMDVVE----SGNK 201

Query: 179 NIVLETLKVGD 189
           NI L  ++  +
Sbjct: 202 NIELCVIRKNE 212


>gi|91087493|ref|XP_968456.1| PREDICTED: similar to proteasome alpha 4 subunit [Tribolium
           castaneum]
 gi|270009464|gb|EFA05912.1| hypothetical protein TcasGA2_TC008727 [Tribolium castaneum]
          Length = 258

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  +++A + + +         + K+ +L    +    AG ++DA  L  
Sbjct: 30  HAGTCLGILANDGILLAAERRNTNKLLDEVFTSEKIYKLNDDMV-CSVAGITSDANVLTN 88

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q   S            + + +      R     IL           + 
Sbjct: 89  ELRLIGQRYLFQYGESMPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAM 166
                          IG+  + A+S+ +            A+ +A K +
Sbjct: 149 QSDPSGNYSGWKATCIGNNSAAAISSLKQEYKEGEMTLEDAKTLAIKVL 197


>gi|149238379|ref|XP_001525066.1| proteasome component C11 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146451663|gb|EDK45919.1| proteasome component C11 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 197

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 44/155 (28%), Gaps = 13/155 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R +   ++A     + G +V+K N  K R L   N+IA F G S D     E  + 
Sbjct: 4   ILGIRLEDATLVATSKAATRGISVLKDNDDKTRHLNAHNLIA-FTGESGDTIQFSEYAQA 62

Query: 78  KLEQY-PNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMG 125
            ++ Y   +        A                  Y  N              +     
Sbjct: 63  NIQLYSMREDEVELSPKATASYVRNLLATSIRSRKPYQVNCLIAGYDIKTQKPSLYYIDY 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                E    A G    Y  S          S E+
Sbjct: 123 LGTLVELPYGAHGYAAFYTTSLLDKHYRKGMSVEQ 157


>gi|298508224|pdb|1VSY|C Chain C, Proteasome Activator Complex
 gi|298508238|pdb|1VSY|Q Chain Q, Proteasome Activator Complex
 gi|298508440|pdb|3L5Q|H Chain H, Proteasome Activator Complex
 gi|298508454|pdb|3L5Q|T Chain T, Proteasome Activator Complex
          Length = 232

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +  K+ +L       +AG    +      
Sbjct: 18  HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINT 77

Query: 72  LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                +  L+ Y        L+R   ++ + +     LR      + A   D+    + T
Sbjct: 78  ARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYT 137

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +++G+  S A +  +           A E+A K +S   D    T   
Sbjct: 138 SNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDR 197

Query: 180 IVLETLKVG 188
           +   T++ G
Sbjct: 198 LEFATIRKG 206


>gi|73977138|ref|XP_532564.2| PREDICTED: similar to Proteasome subunit beta type 2 (Proteasome
           component C7-I) (Macropain subunit C7-I) (Multicatalytic
           endopeptidase complex subunit C7-I) [Canis familiaris]
          Length = 246

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D QV+    V   +           I+    G + D     E ++K 
Sbjct: 50  IGIQGPDYVLVASD-QVAASSIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 108

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 109 VQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 168

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 169 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 210


>gi|290992071|ref|XP_002678658.1| proteasome subunit alpha [Naegleria gruberi]
 gi|284092271|gb|EFC45914.1| proteasome subunit alpha [Naegleria gruberi]
          Length = 236

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA   L +     +V+A + +++      +    K+ +L K    A    ++     +  
Sbjct: 30  HAGAALGIIATDGIVLAAEKKITSKLLDNEKKTEKMYKLDKHIGCAVAGITADANILINS 89

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VIT 122
            RL  +  Q+  Q      +L K     K        +R      L A         +  
Sbjct: 90  ARLHAQRYQFMYQEPIPVEQLVKTLCDSKQSYTQFGGMRPFGVSFLYAGWDKQYGYQLYH 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
                        AIG+    A S  +           A+++A K M+
Sbjct: 150 SDPSGNYGGWKATAIGANNQAAQSILKQEWKEDLKIGAAKKLAVKVMT 197


>gi|195579636|ref|XP_002079667.1| GD21900 [Drosophila simulans]
 gi|194191676|gb|EDX05252.1| GD21900 [Drosophila simulans]
          Length = 201

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 17/169 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ ++    +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLIST-VGESGDTEQFTEFVS 61

Query: 77  KKLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADKTI-TLVITGMGD 126
           K +  Y  +        A          ++   +    +   +   D      +      
Sbjct: 62  KNIALYKMRNGYDLSPQASAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
                      G G  +A S          +   A ++ +K +   A+I
Sbjct: 122 ANALPVNYAGHGYGAIFASSIYDRYWHPNITQDEAYDVFKKCI---AEI 167


>gi|47085943|ref|NP_998331.1| proteasome subunit alpha type-7-like [Danio rerio]
 gi|41351173|gb|AAH65608.1| Zgc:77139 [Danio rerio]
          Length = 251

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   ++ N A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKAL 197


>gi|12229928|sp|Q9PTW9|PSA7_CARAU RecName: Full=Proteasome subunit alpha type-7; AltName:
           Full=Proteasome subunit alpha 4
 gi|6683668|dbj|BAA89276.1| alpha 4 subunit of 20S proteasome [Carassius auratus]
          Length = 251

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   ++ N A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKAL 197


>gi|219121310|ref|XP_002185881.1| proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582730|gb|ACI65351.1| proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 245

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 66/194 (34%), Gaps = 30/194 (15%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++     ++A + ++S    +  ++  K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAVGLQTKDGCILAVEKRLSS-PLLDPSSVEKIAEVDSHIG-AAMSGLVADARTLVDH 91

Query: 75  LEKKLEQYPNQ---------LLRSSVELAKDW-------RMDKYLRNLEAMILIADKTI- 117
              + + +            L ++  +LA  +          +  R     +L+A     
Sbjct: 92  ARVEAQNHTFTYDEPIGVEALTQAVCDLALSFGEGSDGDSKKRMSRPFGVALLLAGYDEL 151

Query: 118 --TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +               AIG+G   A S      S   +   AEE+A   +    + 
Sbjct: 152 DGCQLFFSDPSGTFVRYKAKAIGAGSEGAQSNLEESYSETMTLNEAEELALSTLKQVME- 210

Query: 173 CVYTNHNIVLETLK 186
                  I +E ++
Sbjct: 211 -----EKISIENIE 219


>gi|3114271|pdb|1RYP|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114285|pdb|1RYP|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513414|pdb|1G65|B Chain B, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513428|pdb|1G65|P Chain P, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|20150378|pdb|1JD2|B Chain B, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150399|pdb|1JD2|W Chain W, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|93279369|pdb|2F16|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279383|pdb|2F16|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279657|pdb|2FNY|B Chain B, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279671|pdb|2FNY|P Chain P, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032203|pdb|2FAK|B Chain B, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032217|pdb|2FAK|P Chain P, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490844|pdb|2GPL|B Chain B, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490858|pdb|2GPL|P Chain P, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016368|pdb|3D29|B Chain B, Proteasome Inhibition By Fellutamide B
 gi|190016382|pdb|3D29|P Chain P, Proteasome Inhibition By Fellutamide B
 gi|197725322|pdb|3E47|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725336|pdb|3E47|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939213|pdb|3DY3|B Chain B, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939227|pdb|3DY3|P Chain P, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939241|pdb|3DY4|B Chain B, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939255|pdb|3DY4|P Chain P, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828238|pdb|3GPJ|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828252|pdb|3GPJ|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588322|pdb|3GPT|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588336|pdb|3GPT|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588350|pdb|3GPW|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588364|pdb|3GPW|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588544|pdb|3HYE|B Chain B, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588558|pdb|3HYE|P Chain P, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|330689382|pdb|3MG4|B Chain B, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689396|pdb|3MG4|P Chain P, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 244

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +  K+ +L       +AG    +      
Sbjct: 30  HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINT 89

Query: 72  LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                +  L+ Y        L+R   ++ + +     LR      + A   D+    + T
Sbjct: 90  ARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYT 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +++G+  S A +  +           A E+A K +S   D    T   
Sbjct: 150 SNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDR 209

Query: 180 IVLETLKVG 188
           +   T++ G
Sbjct: 210 LEFATIRKG 218


>gi|217072126|gb|ACJ84423.1| unknown [Medicago truncatula]
          Length = 223

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 63/170 (37%), Gaps = 17/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +     + + ++ +K+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSKTHVVLACVNKA---NSELSSHQKKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y         + R  V+LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSECINYNYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAAD 171
                  E    AIGS    A +      +  T +S E++ + A+  A +
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERKFNNFTASSREDLIKDALIAARE 197


>gi|170579172|ref|XP_001894710.1| proteasome subunit alpha type 3 [Brugia malayi]
 gi|158598578|gb|EDP36445.1| proteasome subunit alpha type 3, putative [Brugia malayi]
          Length = 250

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 49/166 (29%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T++ +R    VV A D  ++    V  AN R         I    AG   D   LL+
Sbjct: 33  NGGTMIAIRGKDGVVTAVDKLITSKLYVENANPRMANAGE--YIGCAMAGIYPDCRALLD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL----------RNLEAMILIADKTIT-LVIT 122
               +   Y  +            ++ +Y+                +   DK     +  
Sbjct: 91  YAVSEALNYLKEYRAPIPIKKLANQLAEYVHVYTLGISRPFGASIFLTAWDKKNGSQLFL 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                L  E    AIG     A +    L       +++  +A  I
Sbjct: 151 LEPSGLCYEYKAWAIGKHRQAAKTEIEKLKFEDIPMQQLVNEAARI 196


>gi|328874689|gb|EGG23054.1| proteasome subunit alpha type 5 [Dictyostelium fasciculatum]
          Length = 245

 Score = 51.9 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 74/196 (37%), Gaps = 23/196 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++ +  VV+  + +++    +  ++ +KV  +   ++I   +G +AD+ T+++ 
Sbjct: 34  GSTSIGIQCEEGVVLVVEKRLTS-TLLEPSSIQKVVEID-YHLICAMSGLTADSRTIIDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAK------------DWRMD---KYLRNLEAMILIA--DKTI 117
              + + +           +             + R D   +  R     +LIA  D+  
Sbjct: 92  ARIETQNHRFNYDEPMGIESTVQSICDLALRFGENRKDGEERMSRPFGVALLIAGVDERG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +          +    AIG+G   A +  +   S   S +E   +A   +    +  V
Sbjct: 152 PQLYHSDPSGTFTQYHAKAIGAGSEGAQTTLQEKYSKTLSLQETIQLALTTLKQVMEEAV 211

Query: 175 YTNHNIVLETLKVGDE 190
            T  N+ L  +   ++
Sbjct: 212 -TTTNVELAVISKKEK 226


>gi|195117638|ref|XP_002003354.1| GI17867 [Drosophila mojavensis]
 gi|193913929|gb|EDW12796.1| GI17867 [Drosophila mojavensis]
          Length = 214

 Score = 51.9 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 52/163 (31%), Gaps = 12/163 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA-----GFAGSSADAFTL 71
           T++ ++    V++A D  ++     ++ N  K+R L   +++      G +   AD    
Sbjct: 3   TVIGLKGKDYVMLAADTMLAKNIYFLRDNCSKIRVLSSNSMVGVIGNEGDSTKFADFIAT 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRM---DKYLRNLEAMILIADKTITL-VITGMGDV 127
              L +    Y       +    +        +    +  ++   D      +       
Sbjct: 63  RVSLYEIANGYSMDTPIVTHFARQHLLSSLASRIKFVVSMLVACFDTKRGASLCYIDSKG 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                     G G S ++S    +     S E+   I R+ ++
Sbjct: 123 ASQYLNYSGQGIGNSVSMSIFHTMWRPDLSIEDGLAIVRRCVT 165


>gi|195344560|ref|XP_002038849.1| GM17161 [Drosophila sechellia]
 gi|194133979|gb|EDW55495.1| GM17161 [Drosophila sechellia]
          Length = 201

 Score = 51.9 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 17/169 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ ++    +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLIST-VGESGDTEQFTEFVS 61

Query: 77  KKLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADKTI-TLVITGMGD 126
           K +  Y  +        A          ++   +    +   +   D      +      
Sbjct: 62  KNIALYKMRNGYDLSPHASAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
                      G G  +A S          +   A ++ +K +   A+I
Sbjct: 122 ANALPVNYAGHGYGAIFASSIYDRYWHPNITQDEAYDVFKKCI---AEI 167


>gi|240849179|ref|NP_001155695.1| proteasome subunit alpha type-like [Acyrthosiphon pisum]
 gi|239790061|dbj|BAH71616.1| ACYPI007113 [Acyrthosiphon pisum]
          Length = 252

 Score = 51.9 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + V     VV+  + + S+     +   RK+  L    ++A FAG +ADA  ++ 
Sbjct: 30  KGCTAIGVLGKDCVVLGVEKK-SIAMLQEERTVRKICPLDSHIVMA-FAGLTADARVIIN 87

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIA---DKTITLVI 121
           R + + +     L  +            + + +      R      LIA   +     + 
Sbjct: 88  RAQMECQSQYLTLGETVTTEYITRFVASIKQKYTQSNGRRPFGISCLIAGFNNNGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G          +   +     T+    ++A +A+
Sbjct: 148 QTEPSGIYYEWKANATGRNSKLVKEFLQDNYNDEAVSTEQGTIKLAVRAL 197


>gi|194770194|ref|XP_001967182.1| GF19028 [Drosophila ananassae]
 gi|190619302|gb|EDV34826.1| GF19028 [Drosophila ananassae]
          Length = 249

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGSNCVVLGVEKK-SVAKLQEDRTVRKICMLDHH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                   STQN   ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKTVREFFEKSYSANEVSTQNGTVKLAIRAL 197


>gi|118786445|ref|XP_315431.3| AGAP005423-PA [Anopheles gambiae str. PEST]
 gi|116126325|gb|EAA11369.3| AGAP005423-PA [Anopheles gambiae str. PEST]
          Length = 249

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + S+ +   +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAIGVRGKDVVVLGVEKK-SVAKLQEERTVRKICLLDHH-VVMAFAGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +              R   EL +        R      LI          + 
Sbjct: 88  RAQVQCQSHKLSEEDPVTLEYITRYIAELKQKHTQSNGRRPFGISCLIGGFDYDGVPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEE----IARKAM 166
                 +  E    A G              S    S EE    +A +A+
Sbjct: 148 KTEPSGVYCEWKANATGRSAKTVREFLEEHYSPAAVSTEEGTITLAIRAL 197


>gi|259146637|emb|CAY79894.1| Pre9p [Saccharomyces cerevisiae EC1118]
          Length = 258

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +  K+ +L       +AG    +      
Sbjct: 31  HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINT 90

Query: 72  LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                +  L+ Y        L+R   ++ + +     LR      + A   D+    + T
Sbjct: 91  ARNHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +++G+  S A +  +           A E+A K +S   D    T   
Sbjct: 151 SNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDR 210

Query: 180 IVLETLKVG 188
           +   T++ G
Sbjct: 211 LEFATIRKG 219


>gi|46254462|gb|AAS86204.1| alpha4 proteasome subunit [Drosophila simulans]
 gi|46254464|gb|AAS86205.1| alpha4 proteasome subunit [Drosophila simulans]
 gi|46254466|gb|AAS86206.1| alpha4 proteasome subunit [Drosophila simulans]
 gi|46254468|gb|AAS86207.1| alpha4 proteasome subunit [Drosophila simulans]
 gi|46254470|gb|AAS86208.1| alpha4 proteasome subunit [Drosophila simulans]
 gi|46254472|gb|AAS86209.1| alpha4 proteasome subunit [Drosophila simulans]
 gi|46254488|gb|AAS86217.1| alpha4 proteasome subunit [Drosophila mauritiana]
 gi|46254490|gb|AAS86218.1| alpha4 proteasome subunit [Drosophila mauritiana]
 gi|46254492|gb|AAS86219.1| alpha4 proteasome subunit [Drosophila mauritiana]
 gi|46254494|gb|AAS86220.1| alpha4 proteasome subunit [Drosophila mauritiana]
          Length = 249

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  ++ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEKK-SVAKLQEDRKVRKICMLDNH-VVMAFAGLTADARIMIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                     ++ A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRAL 197


>gi|46254496|gb|AAS86221.1| alpha4 proteasome subunit [Drosophila sechellia]
 gi|46254498|gb|AAS86222.1| alpha4 proteasome subunit [Drosophila sechellia]
 gi|46254500|gb|AAS86223.1| alpha4 proteasome subunit [Drosophila sechellia]
          Length = 249

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG +ADA  ++ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEKK-SVAKLQEDRKVRKICMLDNH-VVMAFAGLTADARIMIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +          R   +L + +      R      LI          + 
Sbjct: 88  RAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                     ++ A ++A +A+
Sbjct: 148 QTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRAL 197


>gi|324519674|gb|ADY47451.1| Proteasome subunit alpha type-3 [Ascaris suum]
          Length = 250

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T++ ++    VV A D  +     V  AN R         +    AG   D   LL+
Sbjct: 33  NGGTMIALKGKNGVVTAVDKLIPSKLYVPNANPRMGNAGE--TVGVALAGVYPDCRALLD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL----------RNLEAMILIADKTIT-LVIT 122
               +  +Y  +            ++ +Y+                +   DK     +  
Sbjct: 91  YAVGEALKYLREYRTPMPIKKLADQLAEYVHIFTLGISRPFGASVFLTAWDKKNGSQLFL 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                L  E    AIG     A +    L     + E++ ++A  I
Sbjct: 151 IEPSGLCYEYKAWAIGKHRQAAKTEIEKLKLEDLTTEQLVKEAARI 196


>gi|84782832|gb|ABC61695.1| LMPX protein [Crassostrea gigas]
          Length = 72

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTV 41
          H TT L  +    V++A D + + G ++
Sbjct: 45 HGTTTLAFKFQHGVIVAVDSRATAGPSI 72


>gi|159112020|ref|XP_001706240.1| 20S proteasome alpha subunit 5 [Giardia lamblia ATCC 50803]
 gi|157434334|gb|EDO78566.1| 20S proteasome alpha subunit 5 [Giardia lamblia ATCC 50803]
          Length = 245

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 27/192 (14%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T L +R    +V A + + S    +     R +        +A  AG ++D+  LL+   
Sbjct: 34  TALAIRTHTGIVFAVERRTSSPLRLQTRFERIMHVDDH--AMACVAGHASDSKLLLQSAR 91

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL-------------RNLEAMILIADKTITLVITG 123
            + + +           A    + +                    +I   D +   +   
Sbjct: 92  TEAQSHRFLYDEFVPLQALSESLSEVFINFGRGKKKLGRPFGCSLLIGGLDGSTPRLFCA 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-------AEEIARKAMSIAADICVYT 176
                  E    ++G+G + A    +       +       A EI R  M          
Sbjct: 152 EPSGSVTEAMARSLGAGSTTAQQTLQDSYRDDMTLDDAKLLALEILRDVMESTVR----- 206

Query: 177 NHNIVLETLKVG 188
             N+ + T+   
Sbjct: 207 GDNVEMATISYD 218


>gi|209879203|ref|XP_002141042.1| proteasome subunit alpha type 2 [Cryptosporidium muris RN66]
 gi|209556648|gb|EEA06693.1| proteasome subunit alpha type 2, putative [Cryptosporidium muris
           RN66]
          Length = 236

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 54/164 (32%), Gaps = 12/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           H    L ++    VVIA + +VS    + + + RK+  + KG         +     L +
Sbjct: 31  HGRPALGIKAKNGVVIASEKKVST-TLIEQNSIRKIEYITKGIGCCFAGMPADFRVILKK 89

Query: 74  RLEKKLEQY--------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             +     +         N+L+R    + +++     +R     +L+A         +  
Sbjct: 90  SRKVAQRYFATYHEEIPVNELVREVAAVMQEFTQSGGVRPFGISLLVAGFDHRKEPKLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A S      +++   E+    A+
Sbjct: 150 IDPSGAYFGWKASAIGKDMQNAKSFLEKRYNSEIEIEDAIHTAL 193


>gi|323348418|gb|EGA82663.1| Pre9p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 258

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +  K+ +L       +AG    +      
Sbjct: 31  HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINT 90

Query: 72  LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                +  L+ Y        L+R   ++ + +     LR      + A   D+    + T
Sbjct: 91  ARXHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +++G+  S A +  +           A E+A K +S   D    T   
Sbjct: 151 SNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDR 210

Query: 180 IVLETLKVG 188
           +   T++ G
Sbjct: 211 LEFATIRKG 219


>gi|71746456|ref|XP_822283.1| proteasome subunit alpha 5 [Trypanosoma brucei TREU927]
 gi|12229950|sp|Q9XZG5|PSA5_TRYBB RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
           proteasome subunit alpha-5
 gi|4884926|gb|AAD31877.1|AF140353_1 20S proteasome alpha 5 subunit [Trypanosoma brucei brucei]
 gi|70831951|gb|EAN77455.1| proteasome alpha 5 subunit, putative [Trypanosoma brucei]
          Length = 246

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 49/162 (30%), Gaps = 18/162 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLL 72
            +T L ++    V+IA + +V     V  ++  K+  +      +++G    +       
Sbjct: 34  GSTSLGIQTPDAVIIAAEKRVPS-TLVDPSSVNKILEIDHHIGTVLSGMVADARILVD-H 91

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDW------------RMDKYLRNLEAMILIA--DKTIT 118
            R+E +  ++      S    A               R     R     +LIA  D+   
Sbjct: 92  ARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDENGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
            +               AIG G   A +          + EE
Sbjct: 152 QLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEE 193


>gi|302911258|ref|XP_003050453.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731390|gb|EEU44740.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 203

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 43/150 (28%), Gaps = 12/150 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++KA+  K R L K  ++A F+G + D     E +++ 
Sbjct: 5   LGITGKDFTIIAASKAAMRGATILKASDDKTRALNKHTLLA-FSGEAGDTVQFAEYIQRN 63

Query: 79  LEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGDV 127
            + Y  +                           Y  NL    +        +       
Sbjct: 64  AQLYSMRNESDLSPSGLAHFVRGELATSLRSRKPYNVNLLMGGVDPITGKPSLYWLDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS 157
              +    A G    Y LS          +
Sbjct: 124 SLADVPYAAHGYAQYYCLSILDKHHHPDIT 153


>gi|224106660|ref|XP_002314241.1| predicted protein [Populus trichocarpa]
 gi|118488569|gb|ABK96097.1| unknown [Populus trichocarpa]
 gi|222850649|gb|EEE88196.1| predicted protein [Populus trichocarpa]
          Length = 249

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  +   + ++  + R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVIGIKCKDGIVMGVEKLI-ASKMMLPGSNRRIHTVHRHSGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +             R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEASNYQSVYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L  ++ +  E   +   I
Sbjct: 151 VEPSGISYRYFGAAIGKGKQAAKTEIEKLKLSEMTCREGVLEVAKI 196


>gi|322825709|gb|EFZ30592.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi]
          Length = 268

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 22/189 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    ++ A + + S+ +       RK+ +L +   +A FAG SADA  L+ 
Sbjct: 49  KGLCAVGVRGKDSIIFAVEKK-SVQKLQDSRTIRKIYKLDEHIYLA-FAGLSADARVLVN 106

Query: 74  RLEKKLEQYPNQLLRSS------VELAKDWRMDKYLRNLEAMIL------IADKTITLVI 121
             + + +++      +         +AK  +            +        +     + 
Sbjct: 107 HAQLECQRFRLNYEDAVDVDLLVRYVAKVQQKSTQSSGSRPYGVSTIIGGFNENGQPHLW 166

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNH 178
                 +      +AIG      L           + ++    A KA+  A +    +  
Sbjct: 167 KTDPSGMSSAWRAVAIGRNDKTVLEFMEKSYQENMTRDQCVHFAIKALLEAVE----SGS 222

Query: 179 -NIVLETLK 186
            NI L  L+
Sbjct: 223 KNIELVVLE 231


>gi|241957261|ref|XP_002421350.1| 20S proteasome component, putative; macropain subunit, putative;
           multicatalytic endopeptidase complex subunit, putative;
           proteinase YSCE subunit, putative [Candida dubliniensis
           CD36]
 gi|223644694|emb|CAX40684.1| 20S proteasome component, putative [Candida dubliniensis CD36]
          Length = 264

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 58/172 (33%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    +V+A +  +     + K N ++++ + +   +  ++G   D    + 
Sbjct: 33  NGGTSIGIKCKDGIVLAVEKIIQSKLLIPKKN-KRIQTVDRNIGVV-YSGLLPDGRHFVN 90

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + + +          L+       +++     +R    + +I         + +
Sbjct: 91  RCRDECQSFKSIFKTVMSIPNLMDRMGIYVQNYTCYNSVRPFGIVSIIGGVDNEDGESYL 150

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                          A G G   A S    L   + +  E    A++ AA I
Sbjct: 151 YMIEPSGSYWGYNGAATGKGRQIAKSELEKLNYEELTCLE----AINHAARI 198


>gi|11513993|pdb|1G0U|B Chain B, A Gated Channel Into The Proteasome Core Particle
 gi|11514007|pdb|1G0U|P Chain P, A Gated Channel Into The Proteasome Core Particle
 gi|14488807|pdb|1FNT|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488821|pdb|1FNT|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
          Length = 245

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +  K+ +L       +AG    +      
Sbjct: 31  HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINT 90

Query: 72  LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                +  L+ Y        L+R   ++ + +     LR      + A   D+    + T
Sbjct: 91  ARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +++G+  S A +  +           A E+A K +S   D    T   
Sbjct: 151 SNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDR 210

Query: 180 IVLETLKVG 188
           +   T++ G
Sbjct: 211 LEFATIRKG 219


>gi|115715489|ref|XP_796247.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115955776|ref|XP_001178733.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 259

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 48/169 (28%), Gaps = 10/169 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + +R    VV   +  V+       +N R        G  +AG    +     + 
Sbjct: 33  NSGTAVGLRCKDGVVFGVEKLVTSKLYEQGSNKRIFTVDRHVGMAVAGLIADARQVVEIA 92

Query: 73  ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD--KTITLVITGM 124
                              L       A  + +   +R   + +L+    K    +    
Sbjct: 93  REEASDYRASYGTPIPVKHLTDRVAMYAHAYTLYSAIRPFGSSVLLGSYEKDTPGLYMID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI-ARKAMSIAADI 172
              +       AIG     A +    L++     + +   +A+   A I
Sbjct: 153 PSGVSWGYYGCAIGKAKQGAKTEIEKLLAGDKQLKNLTCEEALKEVAKI 201


>gi|17380219|sp|Q9NHC6|PSB2_TRYBB RecName: Full=Proteasome subunit beta type-2; AltName: Full=20S
           proteasome subunit beta-4
 gi|7141310|gb|AAF37284.1|AF226673_1 20S proteasome beta 4 subunit [Trypanosoma brucei]
          Length = 206

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 46/166 (27%), Gaps = 19/166 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL----L 72
           T +  R    V++A  G  +     +     K+  L    ++A    +      +     
Sbjct: 4   TTIGFRCQDFVLVAAAGLNAFYYIKITDTEDKITELDSHKVVACAGENGPRTHFVEYVKC 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM----ILIADKTIT---------- 118
               KK+ ++   +   +        +   LR+ + +     L+A   +           
Sbjct: 64  NMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDVATG 123

Query: 119 -LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
             +          E      G G  +  +    +     +A+E   
Sbjct: 124 AHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVE 169


>gi|330936239|ref|XP_003305302.1| hypothetical protein PTT_18110 [Pyrenophora teres f. teres 0-1]
 gi|311317706|gb|EFQ86585.1| hypothetical protein PTT_18110 [Pyrenophora teres f. teres 0-1]
          Length = 273

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 47/163 (28%), Gaps = 14/163 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  +     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGSDIVVLGCEKRSAMKLQDTRITPSKICLVDTHVALA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +         +     +
Sbjct: 89  KARLEAQSHRLTVEDPVSIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDPNDKTPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                  +       AIG                    EE  +
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKEGMDREETIK 191


>gi|261331940|emb|CBH14933.1| 20S proteasome subunit alpha 5 [Trypanosoma brucei gambiense
           DAL972]
          Length = 246

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 49/162 (30%), Gaps = 18/162 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLL 72
            +T L ++    V+IA + +V     V  ++  K+  +      +++G    +       
Sbjct: 34  GSTSLGIQTPDAVIIAAEKRVPS-TLVDPSSVNKILEIDHHIGTVLSGMVADARILVD-H 91

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDW------------RMDKYLRNLEAMILIA--DKTIT 118
            R+E +  ++      S    A               R     R     +LIA  D+   
Sbjct: 92  ARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDENGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
            +               AIG G   A +          + EE
Sbjct: 152 QLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEE 193


>gi|6321574|ref|NP_011651.1| Pre9p [Saccharomyces cerevisiae S288c]
 gi|130875|sp|P23638|PSA4_YEAST RecName: Full=Proteasome component Y13; AltName: Full=Macropain
           subunit Y13; AltName: Full=Multicatalytic endopeptidase
           complex subunit Y13; AltName: Full=Proteinase YSCE
           subunit 13
 gi|75765701|pdb|1Z7Q|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765715|pdb|1Z7Q|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|178847461|pdb|2ZCY|B Chain B, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847475|pdb|2ZCY|P Chain P, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847503|pdb|3BDM|B Chain B, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847517|pdb|3BDM|P Chain P, Yeast 20s Proteasome:glidobactin A-Complex
 gi|323462937|pdb|3NZJ|B Chain B, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462951|pdb|3NZJ|P Chain P, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462965|pdb|3NZW|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462979|pdb|3NZW|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462993|pdb|3NZX|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463007|pdb|3NZX|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|172262|gb|AAA34907.1| proteasome Y13 [Saccharomyces cerevisiae]
 gi|506480|emb|CAA40054.1| proteasome Y13 subunit [Saccharomyces cerevisiae]
 gi|1323225|emb|CAA97148.1| PRE9 [Saccharomyces cerevisiae]
 gi|151943415|gb|EDN61726.1| proteasome component Y13 [Saccharomyces cerevisiae YJM789]
 gi|190406847|gb|EDV10114.1| proteasome component Y13 [Saccharomyces cerevisiae RM11-1a]
 gi|207345073|gb|EDZ72012.1| YGR135Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256270347|gb|EEU05553.1| Pre9p [Saccharomyces cerevisiae JAY291]
 gi|285812328|tpg|DAA08228.1| TPA: Pre9p [Saccharomyces cerevisiae S288c]
 gi|323304876|gb|EGA58634.1| Pre9p [Saccharomyces cerevisiae FostersB]
 gi|323308999|gb|EGA62229.1| Pre9p [Saccharomyces cerevisiae FostersO]
 gi|323354824|gb|EGA86657.1| Pre9p [Saccharomyces cerevisiae VL3]
          Length = 258

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 14/189 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T + +     +V+A + +V+        +  K+ +L       +AG    +      
Sbjct: 31  HAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINT 90

Query: 72  LE-RLEKKLEQYPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                +  L+ Y        L+R   ++ + +     LR      + A   D+    + T
Sbjct: 91  ARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYT 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHN 179
                       +++G+  S A +  +           A E+A K +S   D    T   
Sbjct: 151 SNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDR 210

Query: 180 IVLETLKVG 188
           +   T++ G
Sbjct: 211 LEFATIRKG 219


>gi|198418299|ref|XP_002121650.1| PREDICTED: similar to proteasome subunit alpha type 7 [Ciona
           intestinalis]
          Length = 252

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 49/160 (30%), Gaps = 14/160 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + VR   +VV+  + + S+ Q   +   RK+  +    +   FAG +ADA  ++ 
Sbjct: 29  KGATAVGVRGKDIVVLGVEKK-SVAQLQEERTVRKICTIDDH-VCMAFAGLTADARVIVN 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR-----------MDKYLRNLEAMILIADKT-ITLVI 121
           +   + + +   +                         +    L A+I+  D      + 
Sbjct: 87  KARIECQSHRLTVEDPVTVEYITRYIATVKQRYTQSNGRRPFGLSALIVGFDYDGTPHLY 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                         AIG              +   +A E+
Sbjct: 147 QTDPSGTYHAWKANAIGRSAKTVREFLEENYNADTAASEV 186


>gi|225556940|gb|EEH05227.1| proteasome component PRE6 [Ajellomyces capsulatus G186AR]
          Length = 282

 Score = 51.5 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  L     +A FAG +ADA  L++
Sbjct: 43  RGTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKLCLLDNHVCLA-FAGLNADARILVD 101

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 102 KARLEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDHGDDVPRL 161

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 162 YQTEPSGIYSAWKANAIGRSSKTVREFLERHHKDDMDREATIQLTIKSL 210


>gi|197129683|gb|ACH46181.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
          Length = 229

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L ++  G V++A D   S G         ++ ++    ++ G +G  AD 
Sbjct: 47  SPM-VTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVL-GASGDLADF 104

Query: 69  FTLLERLEK 77
             L + LE+
Sbjct: 105 QHLRQLLEQ 113


>gi|5668575|gb|AAD45962.1|U44425_1 protein serine kinase c17 [Homo sapiens]
          Length = 143

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 2/81 (2%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  V     +V+  D +   G  ++     K+  +       G    +AD     + 
Sbjct: 39  GTTIAGVVYKDGIVLGADTEQLKGWLLLDNGCSKIHFISPNIYCCG--AGTADTDMTTQL 96

Query: 75  LEKKLEQYPNQLLRSSVELAK 95
           +   LE +     R    +  
Sbjct: 97  ISSNLELHSLSTGRLPRVVTA 117


>gi|328771855|gb|EGF81894.1| hypothetical protein BATDEDRAFT_19045 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 247

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 16/167 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L V     +V+A + + S  + +   +  K+ RL         AG +ADA TL+ 
Sbjct: 30  HAGTALGVLSTEGIVLAAERKTSS-KLLENISREKIYRL-NDTTCCAVAGLNADANTLIS 87

Query: 74  RLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
               + ++Y  +               ++ + +     LR     +L           + 
Sbjct: 88  YCRVQAQKYLFRFNEPIPVEQLVQNLCDMKQGYTQYGGLRPFGVSLLYGGYDEHFGFQLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        M IG+  + A S  +     + + +E   KA++I
Sbjct: 148 HSDPSGNYSGWKAMCIGANSTNATSLLKQDYKEEMTLKEA--KALAI 192


>gi|91086657|ref|XP_967917.1| PREDICTED: similar to proteasome beta 2 subunit-like protein
           [Tribolium castaneum]
 gi|270009752|gb|EFA06200.1| hypothetical protein TcasGA2_TC009049 [Tribolium castaneum]
          Length = 202

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++ +   +IA D   +    VMK +  K+ +L    +    AG   D     E + K 
Sbjct: 5   IGIKFNDFAIIAADMTNAHSIMVMKTDEDKLYKL-SNKLAMAIAGEQGDTNQFAEYIAKN 63

Query: 79  LEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +                +  D    +   ++  ++   D      +        
Sbjct: 64  VQLYKMRNNYELSPKEASHFTRRILADNLRSRTPYHVNLLLAGYDNQEGPQLYFMDYLAS 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMS 167
                  A G GG ++LS          + +   E+ +K + 
Sbjct: 124 VASVDYAAHGYGGYFSLSIMDRNYLPTMTKDQGYELLKKCVK 165


>gi|301763519|ref|XP_002917175.1| PREDICTED: proteasome subunit beta type-2-like [Ailuropoda
           melanoleuca]
          Length = 201

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D QV+    V   +           I+    G + D     E ++K 
Sbjct: 5   IGIQGPDYVLVASD-QVAASSIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 64  VQLYKMRNGYELSPTAAANFTRRNLADCLRSWTPYHVNLLLAGFDEHEGPALYYMDYLAA 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS      +   S   A E+ RK + 
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLE 165


>gi|189207038|ref|XP_001939853.1| proteasome subunit alpha type-7 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187975946|gb|EDU42572.1| proteasome subunit alpha type-7 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 273

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 47/163 (28%), Gaps = 14/163 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  +     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGSDIVVLGCEKRSAMKLQDTRITPSKICLVDTHVALA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +         +     +
Sbjct: 89  KARLEAQSHRLTVEDPVSIEYITKYIAGVQQRYTQSGGVRPFGISTLIVGFDPNDKTPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                  +       AIG                    EE  +
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKEGMDREETIK 191


>gi|84782834|gb|ABC61696.1| LMPX protein [Crassostrea gigas]
          Length = 72

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTV 41
          H TT L  +    V++A D + + G ++
Sbjct: 45 HGTTTLAFKFQHGVIVAVDSRATAGPSI 72


>gi|119182842|ref|XP_001242525.1| conserved hypothetical protein [Coccidioides immitis RS]
 gi|303319459|ref|XP_003069729.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240109415|gb|EER27584.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320040819|gb|EFW22752.1| proteasome component PRE6 [Coccidioides posadasii str. Silveira]
          Length = 269

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 53/169 (31%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  + +   +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKIGLIDEHVCLA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   +            +A   +       +    +        +  +   +
Sbjct: 89  KARVEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLVVGFDSGDSTPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                  +       AIG                    EE   +A K++
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKDGMDREETIQLAIKSL 197


>gi|302794931|ref|XP_002979229.1| hypothetical protein SELMODRAFT_177615 [Selaginella moellendorffii]
 gi|302817254|ref|XP_002990303.1| hypothetical protein SELMODRAFT_185215 [Selaginella moellendorffii]
 gi|300141865|gb|EFJ08572.1| hypothetical protein SELMODRAFT_185215 [Selaginella moellendorffii]
 gi|300152997|gb|EFJ19637.1| hypothetical protein SELMODRAFT_177615 [Selaginella moellendorffii]
          Length = 233

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L +R    VVIA + ++     V + + +KV+ +      + ++G   D+  L+ +
Sbjct: 30  GQTSLGIRVRNGVVIATEKKLPS-ILVDETSIQKVQNVTSNIG-SVYSGMGPDSRVLMRK 87

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
            +K+  QY           QL+R    + +++     +R     +L+A  D     +   
Sbjct: 88  SQKQALQYFRLYKEHIPVSQLVREIAAVMQEFTQSGGVRPFGVSLLVAGFDDEGPHLYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG   S A +      +     E+    A+
Sbjct: 148 DPSGSYFSWKASAIGKNASNAKTFLEKRYTDDLELEDAVHTAI 190


>gi|255029339|ref|ZP_05301290.1| ATP-dependent protease peptidase subunit [Listeria monocytogenes
           LO28]
          Length = 30

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 23/30 (76%)

Query: 156 NSAEEIARKAMSIAADICVYTNHNIVLETL 185
             A++IAR A+ IA++ICV+TN +I +E L
Sbjct: 1   MEAKDIARHALEIASEICVFTNDHITVEEL 30


>gi|328874218|gb|EGG22584.1| 20S proteasome subunit alpha-3 [Dictyostelium fasciculatum]
          Length = 248

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 52/161 (32%), Gaps = 13/161 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ +R    VV+  +  +         + R++  +     I G AG  ADA  L+ 
Sbjct: 33  NSGTVVAIRCKDGVVMGVEKILPSKML-CHGSNRRLHSIDLHIGI-GIAGFLADARQLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY-----------LRNLEAMILIADKTITLVIT 122
           R   + +QY +   +         R+  Y                  I   D T   +  
Sbjct: 91  RARSEAKQYKSVYGQPIPIKVLAQRIASYNHVHTLYGSVRPFGCSITIAGIDSTGPQLFM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                        ++G G     +    +  T+ +A E  +
Sbjct: 151 IEPSGSCLGYYGTSMGKGKQAVKNELEKINFTEITAAEAVK 191


>gi|260941416|ref|XP_002614874.1| hypothetical protein CLUG_04889 [Clavispora lusitaniae ATCC 42720]
 gi|238851297|gb|EEQ40761.1| hypothetical protein CLUG_04889 [Clavispora lusitaniae ATCC 42720]
          Length = 221

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 12/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL +R  G  +IA     + G +++K    K R L   N++A + G S D     E ++ 
Sbjct: 31  ILGIRVQGATLIATSKAATRGISILKDTDDKTRVLNPHNLVA-YTGESGDTVQFAEYVQA 89

Query: 78  KLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADKTITL--VITGMGD 126
            ++ Y  +        A               +    +  +I   D       +      
Sbjct: 90  NIQLYTMRENHELSPQATASFVRNQLATSIRSRKPYQVNVLIGGYDTKTGAASLNWIDYL 149

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             + E    A G    Y +S          S ++
Sbjct: 150 GTQVELPYAAHGYAAFYCMSLFDRHYRADMSVDD 183


>gi|126133210|ref|XP_001383130.1| hypothetical protein PICST_81403 [Scheffersomyces stipitis CBS
           6054]
 gi|126094955|gb|ABN65101.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 253

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 57/172 (33%), Gaps = 12/172 (6%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSS 65
             A+ M  T I  +     VV+A + +V+        +A K+  +    I   AG    +
Sbjct: 25  QEAISMAGTAI-GILSTEGVVLACEKKVTSKLLDNDGSAEKLYVINDNMICAVAGMTADA 83

Query: 66  ADAFTLLER-LEKKLEQY-----PNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKT 116
           +          +  L+ Y        L++   ++ + +     LR      L A   D+ 
Sbjct: 84  SILVNNARVNAQSYLKTYNEEIPCEILIKRVCDIKQGYTQHGGLRPFGVSFLYAGYDDRY 143

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              + T             +IG+  S A +  +       S +E    A+ +
Sbjct: 144 QFQLFTSNPSGNYSGWKATSIGANNSAAQTLLKKDYKDDLSLKEACELAIKV 195


>gi|302680901|ref|XP_003030132.1| hypothetical protein SCHCODRAFT_11605 [Schizophyllum commune H4-8]
 gi|300103823|gb|EFI95229.1| hypothetical protein SCHCODRAFT_11605 [Schizophyllum commune H4-8]
          Length = 263

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 52/173 (30%), Gaps = 25/173 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK--------ANARKVRRLGKGNIIAGFAGSS 65
           HA T+L V     VV+A + +V+     M          +  K+  L    ++AG AG +
Sbjct: 30  HAGTVLGVLAKDGVVLAAEKKVTGKLLDMSLAKDGGYGGSGEKIFLLNSN-VVAGVAGWT 88

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKT 116
           ADA +L+       +++               R+            LR     +L A   
Sbjct: 89  ADANSLINYARTAAQRHLLMYNEDIPVEVLAQRLCDMKQGYTQYGGLRPFGVSLLYAGYD 148

Query: 117 ITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 +                IG+    A S  +             + A+
Sbjct: 149 PHYQFQLYHSDPSGNYSGWKATCIGANNGTAQSLLKQEYKDDIE----VKDAI 197


>gi|308500215|ref|XP_003112293.1| CRE-PBS-7 protein [Caenorhabditis remanei]
 gi|308268774|gb|EFP12727.1| CRE-PBS-7 protein [Caenorhabditis remanei]
          Length = 236

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 55/176 (31%), Gaps = 25/176 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+  D  VS G+     N  +  ++    ++  F G  AD   L   
Sbjct: 17  GTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDN-VLIAFGGDHADFHWLQNV 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA---------------DKTI 117
           +E+++     +  +     A    +    Y R  +   +                 + + 
Sbjct: 76  IERQV-LLWKRFDQDIGPKALHGYLTSLLYGRRCKMNPIWNTLVVAGVEEEEKNNKETST 134

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNS---AEEIARKAMS 167
             +          +   +A G G      A            S   AE + RK++ 
Sbjct: 135 PFIGVITQKGCAYQVKHIATGLGAFLLNQAVEDEWRKKGEDLSREDAEAVLRKSLE 190


>gi|195489672|ref|XP_002092835.1| GE11446 [Drosophila yakuba]
 gi|194178936|gb|EDW92547.1| GE11446 [Drosophila yakuba]
          Length = 252

 Score = 51.5 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 58/164 (35%), Gaps = 18/164 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R +  +VI  + + S+G    +   RK+  L    ++  F+G +ADA  L+ 
Sbjct: 30  RGSTVVGLRTNNAIVIGVEKR-SVGDLQEERIVRKICMLDDH-VVMTFSGLTADARILVS 87

Query: 74  RLEKKLEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +     +            +L +++      R      L+          + 
Sbjct: 88  RAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGS----YALSAARALMSTQNSAEEI 161
                 +  E      G        Y    A  L++T + A  I
Sbjct: 148 QTEPSGIFYEWRANTTGRSSQPVRDYMEKHADELLATVDEAAAI 191


>gi|322830416|gb|EFZ33445.1| proteasome alpha 5 subunit, putative [Trypanosoma cruzi]
          Length = 245

 Score = 51.1 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 58/188 (30%), Gaps = 20/188 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
            +T L ++    VVIA + +V        +  + +      G +++G    +        
Sbjct: 34  GSTSLGIQTPDAVVIAAEKRVPSVLVDPSSMNKILEIDYHMGTVLSGMVADARILVE-HA 92

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW------------RMDKYLRNLEAMILIA--DKTITL 119
           R+E +  ++           A               R     R     +LIA  D+    
Sbjct: 93  RVEAQNHRFTYDEPMRVESCALATCDLSVRFGESGGRKKLMSRPFGVSLLIAGVDENGPQ 152

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
           +               AIG+G   A +    +     +   AE +A + +    +  + T
Sbjct: 153 LWQTDPSGTYTRYDAQAIGAGAEAAQTVFNEIYHRNMTVEEAETLAVRILKQVMEEEL-T 211

Query: 177 NHNIVLET 184
             NI +  
Sbjct: 212 KSNIEIAI 219


>gi|225711516|gb|ACO11604.1| Proteasome subunit beta type-2 [Caligus rogercresseyi]
          Length = 204

 Score = 51.1 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 45/155 (29%), Gaps = 12/155 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +  +  V++A D Q      ++  +  +       +++    G S D     E + 
Sbjct: 3   TPIGIAFNDFVMVATD-QTCAHSILLMEDTCEKTYSLSNHLLMSAIGQSGDTTEFAEFMT 61

Query: 77  KKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK--TITLVITGMG 125
           K ++ Y  +                        +   ++  ++   DK      + +   
Sbjct: 62  KNIQLYKLRNAYEMSPSEAANFIRRNLADSLRSRNPFHVNLLVAGFDKKSEQAELYSMDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                +      G GG ++            + EE
Sbjct: 122 LAGMVKTEHATHGYGGVFSSGILDRHYKPDMTVEE 156


>gi|302828268|ref|XP_002945701.1| 20S proteasome alpha subunit E [Volvox carteri f. nagariensis]
 gi|300268516|gb|EFJ52696.1| 20S proteasome alpha subunit E [Volvox carteri f. nagariensis]
          Length = 249

 Score = 51.1 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 32/197 (16%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +V+    +  ++  K+  + +    A  +G +ADA TL++ 
Sbjct: 34  GSTAIGICTKEGVVLAVEKRVTS-PLLEPSSIEKIMEIDEHMACA-MSGLTADAKTLIDH 91

Query: 75  ----------LEKKLEQYPNQLLRSSVELAKDWRM------------DKYLRNLEAMILI 112
                     ++ +  ++            +                    R     +LI
Sbjct: 92  ARADTQCFTPMQSQQHRFSYNEPMPVESTTQSLCDLALQFGEGSDEGGGMSRPFGIALLI 151

Query: 113 A--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNS---AEEIARKA 165
           A  D     +          +    AIGSG   A ++    +      +   AE +A   
Sbjct: 152 AGWDDNGPSLYHTDPTGTYIKYSAKAIGSGSEGAQTSLEEALKAKPDMTLAEAEVLALST 211

Query: 166 MSIAADICVYTNHNIVL 182
           +    +  V T  N+ +
Sbjct: 212 LKQVMEEKV-TATNVDV 227


>gi|34391495|gb|AAN46132.1| 20S proteasome beta 7 subunit [Leishmania major]
          Length = 107

 Score = 51.1 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 42/100 (42%), Gaps = 4/100 (4%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ ++ +G V++A D  +S G      N  +++ LG  + +    GS AD   + ++
Sbjct: 4   GASVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCA-TGSYADFQMMAKQ 62

Query: 75  LE---KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL 111
           +E   ++   Y N    +  E+        Y +  +    
Sbjct: 63  VEDNIERQRMYYNVDELNPSEVFSYLHRSIYQKRCDFEPC 102


>gi|71998965|ref|NP_496177.2| Proteasome Alpha Subunit family member (pas-7) [Caenorhabditis
           elegans]
 gi|51338798|sp|Q09583|PSA3_CAEEL RecName: Full=Proteasome subunit alpha type-3; AltName:
           Full=Proteasome subunit alpha 7
 gi|42734293|emb|CAA88436.2| C. elegans protein ZK945.2, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 250

 Score = 51.1 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T++ +R    VV+  D  +S       AN R        N+    AG+  D F L  
Sbjct: 33  NAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNV--NDNVGVAVAGNYPDGFALKN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL----------RNLEAMILIADKTITL-VIT 122
               +  ++                + +Y+              A  +  +K     +  
Sbjct: 91  YAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGISRPFGAGAFFMSWNKQTGGRLFL 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                L  E    A+G     A +    L   +    ++ ++A  I
Sbjct: 151 VEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQLVKEAARI 196


>gi|328768125|gb|EGF78172.1| hypothetical protein BATDEDRAFT_13184 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 224

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 57/188 (30%), Gaps = 16/188 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR   V V+  + + S+ +       RK+  L     +A  AG +ADA  L++
Sbjct: 28  KGTCAVGVRGKNVAVLGIEKK-SVLKLQDPRTVRKIAMLDNHICLAA-AGLTADARVLID 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           +   + + +   +            +A   +       +    +           +  + 
Sbjct: 86  KARVECQSHRLTVEDPVSVEYITRHIASIQQKYTQSGGVRPFGISTLIIGFDVDKVPKLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-NI 180
                 +       A+G                  + +E  + A+    ++ V T   NI
Sbjct: 146 QTDPSGIYSAWKANAVGRSSKTVREFLEKNYKDDMTRDETIKLAIKSLLEV-VQTGAKNI 204

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 205 EIAVMGED 212


>gi|195342043|ref|XP_002037611.1| GM18354 [Drosophila sechellia]
 gi|195576099|ref|XP_002077914.1| GD23168 [Drosophila simulans]
 gi|194132461|gb|EDW54029.1| GM18354 [Drosophila sechellia]
 gi|194189923|gb|EDX03499.1| GD23168 [Drosophila simulans]
          Length = 210

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V++A D   +     MK +  K+ RL   NI+A   G   D     + + 
Sbjct: 5   TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNIMAT-VGDGGDTIQFTDFIS 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADK--TITLVITGMGD 126
           K L  Y           +      K L        R   AM+L          +      
Sbjct: 64  KNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSY 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G G  +  S  +   +++ S E+
Sbjct: 124 GAAQSINHAGHGWGSMFCGSILQRYWNSKLSQED 157


>gi|169615925|ref|XP_001801378.1| hypothetical protein SNOG_11129 [Phaeosphaeria nodorum SN15]
 gi|111060508|gb|EAT81628.1| hypothetical protein SNOG_11129 [Phaeosphaeria nodorum SN15]
          Length = 270

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 47/163 (28%), Gaps = 14/163 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  +     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGADIVVLGCEKRSAMKLQDTRITPSKICLVDTHVALA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +         +     +
Sbjct: 89  KARLEAQSHRLTVEDPVSIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDPNDKTPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                  +       AIG                    EE  +
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKDGMDREETIK 191


>gi|89213678|gb|ABD64146.1| proteasome subunit alpha type 5 [Opisthorchis viverrini]
          Length = 245

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 66/171 (38%), Gaps = 19/171 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    +V+A + +V+    ++ ++  K+ ++      A  +G  ADA TL+ER
Sbjct: 34  GSTGIGIKTPEGIVLAVEKRVNS-PLIVPSSIEKIFKVDDHIACA-VSGLVADARTLIER 91

Query: 75  LEKKLEQYP---------NQLLRSSVELAKDWRMD-----KYLRNLEAMILIA--DKTIT 118
              +   +            + ++   LA  +  D        R   A ++ A  D+   
Sbjct: 92  ARTEAAHHWFVYNEKMSVEDVTKAVSNLALAFGDDDVDSGAMSRPFGAALMFAGIDENGP 151

Query: 119 LVIT-GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            + T G    + P      +      A  A + +  +  +  E  + A+SI
Sbjct: 152 QLYTHGSQWNIHPLQTRSPLDLASEGAQQALQEVFHSNMTLHEGCKHALSI 202


>gi|48142173|ref|XP_393583.1| PREDICTED: proteasome subunit alpha type-7-1-like isoform 1 [Apis
           mellifera]
          Length = 249

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             ++ + VR + VVV+  + + S+ +   +   RK+  L +  ++  FAG +ADA  L+ 
Sbjct: 30  KGSSAVGVRGNDVVVLGVEKK-SIAKLQEERTVRKICLLDEH-VVMAFAGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R    L + +      R      L+A         + 
Sbjct: 88  RAQVECQSHRLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLLAGFDYDGVPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-----IARKAM 166
                 +  E    A G          +   + +  A E     +A +A+
Sbjct: 148 QTEPSGIYYEWKANATGRNAKTVHEFLQKYYTPEEVATEKGTIKLAIRAL 197


>gi|71420529|ref|XP_811519.1| proteasome alpha 5 subunit [Trypanosoma cruzi strain CL Brener]
 gi|18152451|emb|CAC82813.1| proteasome subunit alpha5 [Trypanosoma cruzi]
 gi|70876190|gb|EAN89668.1| proteasome alpha 5 subunit, putative [Trypanosoma cruzi]
          Length = 245

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 58/188 (30%), Gaps = 20/188 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
            +T L ++    VVIA + +V        +  + +      G +++G    +        
Sbjct: 34  GSTSLGIQTPDAVVIAAEKRVPSVLVDPSSMNKILEIDYHMGTVLSGMVADARILVE-HA 92

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW------------RMDKYLRNLEAMILIA--DKTITL 119
           R+E +  ++           A               R     R     +LIA  D+    
Sbjct: 93  RVEAQNHRFTYDEPMRVESCALATCDLSVRFGESGGRKKLMSRPFGVSLLIAGVDENGPQ 152

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
           +               AIG+G   A +    +     +   AE +A + +    +  + T
Sbjct: 153 LWQTDPSGTYTRYDAQAIGAGAEAAQTVFNEIYHRNMTVEEAETLAVRILKQVMEEEL-T 211

Query: 177 NHNIVLET 184
             NI +  
Sbjct: 212 KSNIEIAI 219


>gi|224058900|ref|XP_002299648.1| predicted protein [Populus trichocarpa]
 gi|118488197|gb|ABK95918.1| unknown [Populus trichocarpa]
 gi|222846906|gb|EEE84453.1| predicted protein [Populus trichocarpa]
          Length = 249

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  +   + ++  + R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVIGIKCKDGIVMGVEKLI-ASKMMLPGSNRRIHAVHRHSGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +             R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEATNYQSVYGEPVPIKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L  ++ +  E   +   I
Sbjct: 151 VEPSGISYRYFGAAIGKGKQAAKTEIEKLKLSEMTCREGVIEVAKI 196


>gi|316976947|gb|EFV60138.1| proteasome subunit alpha type-2-A [Trichinella spiralis]
          Length = 277

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     V++  + +++    V   +  K+ ++         +G   D  TL++R
Sbjct: 56  GSTAIGILTREGVLLVCEKRITSTLMVPS-SVEKIMKIDNHIGCTT-SGLIGDTRTLVDR 113

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK-------------YLRNLEAMILIA--DKTITL 119
              +   Y                +                 R     +L A  D+    
Sbjct: 114 ARVEAANYWFYYGDKITVEGVTQAVANLALEFGDDDAEAAMSRPFGVAVLFAGCDRYGPQ 173

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
           +          +    AIGSG   A  A +       S   A+++A   +    +  + T
Sbjct: 174 LYNMDPSGTFIQCQAKAIGSGCESAQQALQEKYDANMSLLEAKKLAISILKQVMEEKI-T 232

Query: 177 NHNIVLETLKVG 188
           + NI + T+   
Sbjct: 233 STNIEIATVTQD 244


>gi|154285012|ref|XP_001543301.1| proteasome component PRE6 [Ajellomyces capsulatus NAm1]
 gi|150406942|gb|EDN02483.1| proteasome component PRE6 [Ajellomyces capsulatus NAm1]
 gi|240277485|gb|EER40993.1| proteasome component PRE6 [Ajellomyces capsulatus H143]
 gi|325093564|gb|EGC46874.1| proteasome component [Ajellomyces capsulatus H88]
          Length = 269

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  L     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKLCLLDNHVCLA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 89  KARLEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDHGDDVPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERHHKDDMDREATIQLTIKSL 197


>gi|330795177|ref|XP_003285651.1| proteasome subunit alpha type 2 [Dictyostelium purpureum]
 gi|325084377|gb|EGC37806.1| proteasome subunit alpha type 2 [Dictyostelium purpureum]
          Length = 233

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 61/165 (36%), Gaps = 14/165 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             + + ++    VV+  + +  L   V  ++ +K+  + +   +  +AG   D+  L+++
Sbjct: 31  GGSAIGIKAKNGVVLVTEKK--LHSLVDVSSVQKISMITENIGVV-YAGMGPDSRVLIKK 87

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ E+Y           QL+R    + +++     +R     +L++  D+    +   
Sbjct: 88  ARKEAEKYYKQYKEMIPVLQLVRELASIMQEYTQSGGVRPFGVSLLVSGFDEKGPHLYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                       AIG     + +      +     ++  + A+  
Sbjct: 148 DPSGSYFAWKATAIGKNMINSKTFLEKRYNDDLEIDDAIQTALIT 192


>gi|195569371|ref|XP_002102683.1| Pros28.1A [Drosophila simulans]
 gi|46254538|gb|AAS86242.1| testes-specific alpha4-t1 proteasome subunit [Drosophila simulans]
 gi|46254540|gb|AAS86243.1| testes-specific alpha4-t1 proteasome subunit [Drosophila simulans]
 gi|46254542|gb|AAS86244.1| testes-specific alpha4-t1 proteasome subunit [Drosophila simulans]
 gi|46254544|gb|AAS86245.1| testes-specific alpha4-t1 proteasome subunit [Drosophila simulans]
 gi|46254546|gb|AAS86246.1| testes-specific alpha4-t1 proteasome subunit [Drosophila simulans]
 gi|194198610|gb|EDX12186.1| Pros28.1A [Drosophila simulans]
          Length = 251

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 21/171 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+         +K+  L K   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSPMQEDRTVQKISMLDKHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------------LEAMILIADKTITLV 120
           R + + + +     +          + ++                     + AD +   +
Sbjct: 88  RGQMECQSHRLNFDKPVTPEYITRYIAQFKHKYTQCTGRRPFGISCLVGGIDADGSA-RL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                  +  E   +A G   +                    A ++A +A+
Sbjct: 147 FHTEPSGIFYEYKAIATGRSANTVREFFEKAYRDHEVTTKCEAIKLATRAL 197


>gi|149240485|ref|XP_001526118.1| proteasome component Y13 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450241|gb|EDK44497.1| proteasome component Y13 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 251

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 66/192 (34%), Gaps = 18/192 (9%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             A+ M    I  +     VV+A + +V+        +A K+  +    +I   AG +AD
Sbjct: 25  QEAISMAGAAI-GIVTSEGVVLACEKKVTSKLLDDDGSAEKLYII-NDQMICAVAGMTAD 82

Query: 68  AFTLLERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTIT 118
           A  L+     + +QY            L++    + + +     LR      L A     
Sbjct: 83  ASILVNNARVQAQQYLKTYSEEIPCEILIKRVANIMQGYTQHGGLRPFGVSFLYAGWDDR 142

Query: 119 L---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICV 174
               + T             AIG+  S A +  +     + + +E    A+ + +  +  
Sbjct: 143 YEFQLYTSNPSGNFSGWKATAIGANSSAAQTLLKKDYKEELTLKEGCELAIKVLSKTMDA 202

Query: 175 YTNHNIVLETLK 186
               N+  E L+
Sbjct: 203 ---SNLNSEKLE 211


>gi|71409750|ref|XP_807203.1| proteasome alpha 7 subunit [Trypanosoma cruzi strain CL Brener]
 gi|71415032|ref|XP_809596.1| proteasome alpha 7 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70871154|gb|EAN85352.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi]
 gi|70874004|gb|EAN87745.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi]
          Length = 247

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 22/189 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    ++ A + + S+ +       RK+ +L +   +A FAG SADA  L+ 
Sbjct: 28  KGLCAVGVRGKDSIIFAVEKK-SVQKLQDSRTIRKIYKLDEHIYLA-FAGLSADARVLVN 85

Query: 74  RLEKKLEQYPNQLLRSS------VELAKDWRMDKYLRNLEAMIL------IADKTITLVI 121
             + + +++      +         +AK  +            +        +     + 
Sbjct: 86  HAQLECQRFRLNYEDAVDVDLLVRYVAKVQQKSTQSSGSRPYGVSTIIGGFNENGQPHLW 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNH 178
                 +      +AIG      L           + ++    A KA+  A +    +  
Sbjct: 146 KTDPSGMSSAWRAVAIGRNDKTVLEFMEKSYQENMTRDQCVHFAIKALLEAVE----SGS 201

Query: 179 -NIVLETLK 186
            NI L  L+
Sbjct: 202 KNIELVVLE 210


>gi|71747326|ref|XP_822718.1| proteasome subunit beta 2 [Trypanosoma brucei TREU927]
 gi|70832386|gb|EAN77890.1| proteasome beta 2 subunit, putative [Trypanosoma brucei]
 gi|261332493|emb|CBH15488.1| 20S proteasome subunit [Trypanosoma brucei gambiense DAL972]
          Length = 206

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 46/166 (27%), Gaps = 19/166 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL----L 72
           T +  R    V++A  G  +     +     K+  L    ++A    +      +     
Sbjct: 4   TTIGFRCQDFVLVAAAGLNAFYYIKITDTEDKITELDSHKVVACAGENGPRTHFVEYVKC 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM----ILIADKTIT---------- 118
               KK+ ++   +   +        +   LR+ + +     L+A   +           
Sbjct: 64  NMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDVATG 123

Query: 119 -LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
             +          E      G G  +  +    +     +A+E   
Sbjct: 124 AHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVE 169


>gi|323451149|gb|EGB07027.1| hypothetical protein AURANDRAFT_60167 [Aureococcus anophagefferens]
          Length = 201

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 51/167 (30%), Gaps = 20/167 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +  +G  ++  D   +      K +  K+ +L    ++ G +G  AD     E ++
Sbjct: 3   TTIGLLGNGYAIVCADQNAARSIVCFKKDEDKIMKLDDFKLL-GQSGVGADNVAFTEYVQ 61

Query: 77  KKLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAMILIADKTITL-VITGMGDV 127
           K +  Y      S    A +          + K       ++   DK +   +       
Sbjct: 62  KNVALYKINNGLSLSTKATNNFIRGDLATALRKGPYQTNLLLGGFDKGVGASLYYIDYMA 121

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
              +      G G ++ LS      +               AA + +
Sbjct: 122 SSNKVNFGCHGYGSNFVLSILDREWTEGLDE----------AAGLDI 158


>gi|301753739|ref|XP_002912724.1| PREDICTED: proteasome subunit alpha type-7-like [Ailuropoda
           melanoleuca]
          Length = 254

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTDIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +  N A ++A +A+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIANDNEAIKLAIRAL 197


>gi|85001541|ref|XP_955485.1| proteasome subunit alpha type 2 [Theileria annulata strain Ankara]
 gi|65303631|emb|CAI76009.1| proteasome subunit alpha type 2, putative [Theileria annulata]
          Length = 236

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 48/166 (28%), Gaps = 15/166 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
                L ++    VVIA + +      +   +  K+         + AG           
Sbjct: 32  KGAPTLGIKATNGVVIAAEKKQPS-TLIESDSLNKIDLFADHIGAVAAGMPADFRVVLKK 90

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             +   K +          QL++    + +++     +R     +L+A  D     +   
Sbjct: 91  GRKEAMKYKAIYGDDIPGSQLVKDVASIMQEFTHSGGVRPFGISLLLASYDDDGPQLYQI 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                       AIGS      +      + +   E+    A+ IA
Sbjct: 151 DPSGAFFGWKATAIGSRMQNNNTFLEKRYNPEMELED----AIHIA 192


>gi|194886434|ref|XP_001976612.1| GG19922 [Drosophila erecta]
 gi|190659799|gb|EDV57012.1| GG19922 [Drosophila erecta]
          Length = 252

 Score = 51.1 bits (121), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 49/153 (32%), Gaps = 14/153 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T++ +R +  +VI  + + S G+   +   RK+  L    +   F+G +ADA  L+ 
Sbjct: 30  RGSTVVGLRTNNAIVIGVEKR-SAGELQEERVVRKICLLDDHLV-MTFSGLTADARILVG 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +     + +          +L +++      R      L+          + 
Sbjct: 88  RAQMEAQSHRLNFEKPATVEYITRYIAQLKQNYTQSNGRRPFGLSCLVGGFDEDGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
                 +  E      G                
Sbjct: 148 QTEPSGIFYEWRASTTGRSSQPVRDYMDKHADE 180


>gi|322801471|gb|EFZ22132.1| hypothetical protein SINV_09089 [Solenopsis invicta]
          Length = 249

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + S+ +   +   RK+  L    +I  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGADVVVLGVEKK-SVAKLQEERTVRKICLLDDH-VIMAFAGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R    L + +      R      L+          + 
Sbjct: 88  RAQVECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLLTGFDYDGVPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                   ST+    ++A +A+
Sbjct: 148 QTEPSGIYYEWKANATGRSAKTVHEFLEKYYTPEEVSTEKGCIKLAIRAL 197


>gi|154757495|gb|AAI51812.1| PSMA7 protein [Bos taurus]
          Length = 237

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|46254536|gb|AAS86241.1| testes-specific alpha4-t1 proteasome subunit [Drosophila simulans]
          Length = 251

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 21/171 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+         +K+  L K   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSPMQEDRTVQKISMLDKHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------------LEAMILIADKTITLV 120
           R + + + +     +          + ++                     + AD +   +
Sbjct: 88  RGQMECQSHRLNFDKPVTPEYITRYIAQFKHKYTQCTGRRPFGISCLVGGIDADGSA-RL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                  +  E   +A G   +                    A ++A +A+
Sbjct: 147 FHTEPSGIFYEYKAIATGRSANTVREFFEKAYRDHEVTTKCEAIKLATRAL 197


>gi|71412055|ref|XP_808230.1| proteasome alpha 5 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70872393|gb|EAN86379.1| proteasome alpha 5 subunit, putative [Trypanosoma cruzi]
          Length = 245

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 20/188 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
            +T L ++    VVIA + +V        +  + +      G +++G    +        
Sbjct: 34  GSTSLGIQTPDAVVIAAEKRVPSVLVDPSSMNKILEIDYHMGTVLSGMVADARILVE-HA 92

Query: 74  RLEKKLEQYPNQLLRSSVELAKDW------------RMDKYLRNLEAMILIA--DKTITL 119
           R+E +  ++           A               R     R     +LIA  D+    
Sbjct: 93  RVEAQNHRFTYDEPMRVESCALATCDLSVRFGESGGRKKLMSRPFGVSLLIAGVDENGPQ 152

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
           +               AIG+G   A +          +   AE +A + +    +  + T
Sbjct: 153 LWQTDPSGTYTRYDAQAIGAGAEAAQTVFNESYHRNMTVEEAETLAVRILKQVMEEEL-T 211

Query: 177 NHNIVLET 184
             NI +  
Sbjct: 212 KSNIEIAI 219


>gi|332265126|ref|XP_003281579.1| PREDICTED: proteasome subunit alpha type-7-like [Nomascus
           leucogenys]
          Length = 316

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 96  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 153

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 154 RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 213

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 214 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 263


>gi|73961787|ref|XP_547630.2| PREDICTED: similar to proteasome (prosome, macropain) subunit,
           alpha type, 8 isoform 2 [Canis familiaris]
          Length = 222

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTDIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +  N A ++A +A+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIANDNEAIKLAIRAL 197


>gi|309365348|emb|CAP23312.2| CBR-PAS-5 protein [Caenorhabditis briggsae AF16]
          Length = 258

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 58/178 (32%), Gaps = 25/178 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII---------AGFAGSS 65
            +T + ++    V++A + + +    V      K+ ++ +   +           FAG  
Sbjct: 34  GSTSIGIKTSEGVLLAAEKRSTSKLMV-NDAIEKISKVDQHIAVHLMYIFILSVTFAGLI 92

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK-------------YLRNLEAMILI 112
           AD+ TL+ER + + + +     R          +                 R     +L 
Sbjct: 93  ADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFGVAMLF 152

Query: 113 A--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           A  D+    +          +    +IG+    A    +       + +E  + A++I
Sbjct: 153 AGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAI 210


>gi|295659891|ref|XP_002790503.1| proteasome component PRE6 [Paracoccidioides brasiliensis Pb01]
 gi|226281680|gb|EEH37246.1| proteasome component PRE6 [Paracoccidioides brasiliensis Pb01]
          Length = 269

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  L     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKLCLLDNHVCLA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 89  KARVEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDHGDKVPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERHHKDDMDREATIQLTIKSL 197


>gi|87240647|gb|ABD32505.1| 20S proteasome, A and B subunits [Medicago truncatula]
 gi|217073055|gb|ACJ84887.1| unknown [Medicago truncatula]
          Length = 336

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 63/190 (33%), Gaps = 14/190 (7%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIA------ 59
           K+  +++  TT + ++    VV+A + +++   + +     + +  +     IA      
Sbjct: 129 KNKQMQL-GTTAIGLKFKEGVVLAAEKRITWPTSPLYPGIVQNIMEIDNNICIAVTVTVT 187

Query: 60  GFAGSSA--DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI 117
           G   +++          L   + +    ++ S  +       D+    + ++I   D   
Sbjct: 188 GSIANASKLVGEARTLALANNISRCQPMVVDSMCQKLSYELADQIHPFVVSLIAGHDNNR 247

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV 174
             +          +    AIG     A  +     +   +   AE IA   +       V
Sbjct: 248 PSLYYSDPFGSFQQCNAKAIGLRSEGADRSLEEQFNQDLTLEKAETIALSILKQVMGEKV 307

Query: 175 YTNHNIVLET 184
            T +N+ +  
Sbjct: 308 -TPNNVDIAK 316


>gi|195161388|ref|XP_002021550.1| GL26572 [Drosophila persimilis]
 gi|198472575|ref|XP_002133075.1| GA28985 [Drosophila pseudoobscura pseudoobscura]
 gi|194103350|gb|EDW25393.1| GL26572 [Drosophila persimilis]
 gi|198139073|gb|EDY70477.1| GA28985 [Drosophila pseudoobscura pseudoobscura]
          Length = 210

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 53/169 (31%), Gaps = 17/169 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V++A +   +     MK +  K+ RL   ++IA   G   D     + + 
Sbjct: 5   TILGIKGPDFVMLASETMQAKSLIFMKDDQSKIHRLSDFSMIAT-VGDGGDTLQFTDFIS 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADK--TITLVITGMGD 126
           K L  Y           A      K L        R   AM+L          +      
Sbjct: 64  KNLHLYKIANGYHLSPRATAHFTRKNLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSY 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
                      G G  +  S  +     + S   A  I +K +   A+I
Sbjct: 124 GAAQSINHAGHGWGSIFCGSILQRFWDQKLSQDQAVSILKKCV---AEI 169


>gi|112362975|emb|CAL34142.1| putative proteasome subunit alpha type 3 [Nidula niveotomentosa]
          Length = 204

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            + T + ++    +V+  +  V     V +AN R+++ + +   +A  AG  AD   L  
Sbjct: 4   KSGTAIGLKVKDGIVLTVEKLVHSKLLVPEAN-RRIQTVDRHIGLAT-AGLLADGRHLSN 61

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   +   Y           A   R+  Y+             +  ++   DK    +  
Sbjct: 62  RARDEAANYRETYNSPPPLKAVADRLGLYVQVYTLYSSVRPFGISTILGSVDKDGPSLFV 121

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       A+G G   A +    L  ++ S  E   +A  I
Sbjct: 122 VEPSGVFFGYNGAAVGKGRQLAKTELEKLKLSELSTREAVIEAARI 167


>gi|157105494|ref|XP_001648894.1| proteasome subunit alpha type [Aedes aegypti]
 gi|157105496|ref|XP_001648895.1| proteasome subunit alpha type [Aedes aegypti]
 gi|94469194|gb|ABF18446.1| 20S proteasome regulatory subunit alpha type PSMA5/PUP2 [Aedes
           aegypti]
 gi|108880078|gb|EAT44303.1| proteasome subunit alpha type [Aedes aegypti]
 gi|108880079|gb|EAT44304.1| proteasome subunit alpha type [Aedes aegypti]
          Length = 242

 Score = 51.1 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 22/171 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    +      K+  + +    A  +G  AD+ TLL+R
Sbjct: 34  GSTAIGICTQEGVVMAVEKRITS-PLMEPTKVEKIVEVDRHIGCAT-SGLMADSRTLLDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIADKTI--T 118
              + + +           +    +                  R     IL A       
Sbjct: 92  ARVECQNHWFVYDERMSVESCAQAVSSLAIQFGDSDDTGSAMSRPFGVAILFAGIENGEP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
            +               AIGSG   A    +       +     ++A+++A
Sbjct: 152 QLWHMDPSGTYIRYDAKAIGSGSEGAQQNLQEYYLQTMT----IKEAINLA 198


>gi|226471268|emb|CAX70715.1| proteasome (prosome, macropain) subunit, beta type 5 [Schistosoma
           japonicum]
          Length = 95

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVY 175
           LV     D       + ++GSG  YA     A    + S   A E+A++++  A      
Sbjct: 3   LVYYVDTDGNRTPGNLFSVGSGSPYAYGVLDAGYKYEMSDEDAYELAKRSIFHATHRDAA 62

Query: 176 TNHNIVL 182
           +   + L
Sbjct: 63  SGGFVNL 69


>gi|224078458|ref|XP_002198763.1| PREDICTED: putative proteasome 28 kDa subunit-like protein
           [Taeniopygia guttata]
          Length = 248

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|197128544|gb|ACH45042.1| putative proteasome 28 kDa subunit-like protein [Taeniopygia
           guttata]
          Length = 239

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|146414760|ref|XP_001483350.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260]
 gi|146391823|gb|EDK39981.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260]
          Length = 251

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 46/171 (26%), Gaps = 18/171 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA----GFAGSSADAFT 70
            +T + +     V++  + +V+    +   +  K+  +      A         S     
Sbjct: 34  GSTAIGIATSEGVILGVEKRVTS-SLLEHTSIEKIVEIDSHIGCAMSGLTADARSMIDHA 92

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRM----------DKYLRNLEAMILIADKTI--- 117
            +  L   L       + S  +   D  +              R     +LIA       
Sbjct: 93  RVSSLTHNLYYDEEIQVESLTQSVCDLALRFGEGAGGEKRLMSRPFGVALLIAGFDKDKG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             +               AIGSG   A +  +       + +E    A+ I
Sbjct: 153 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSMTLKEAEVLALKI 203


>gi|330923591|ref|XP_003300298.1| hypothetical protein PTT_11507 [Pyrenophora teres f. teres 0-1]
 gi|311325635|gb|EFQ91609.1| hypothetical protein PTT_11507 [Pyrenophora teres f. teres 0-1]
          Length = 271

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  +      A  +G  ADA +++E 
Sbjct: 60  GSTAIGVATGEGVILGVEKRVTS-TLLETSSVEKIVEIDHHIGCA-MSGLQADARSMIEH 117

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 118 ARVESQNHAFNYAEPLRVESCTQAICDLALRFGEGAEGEESIMSRPFGVALLIAGYDEDG 177

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 178 PSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHKSLTLPEAEVLTLKTLK 230


>gi|257388445|ref|YP_003178218.1| proteasome subunit alpha [Halomicrobium mukohataei DSM 12286]
 gi|257170752|gb|ACV48511.1| Proteasome endopeptidase complex [Halomicrobium mukohataei DSM
           12286]
          Length = 250

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 46/153 (30%), Gaps = 11/153 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL- 72
             T  + VR  G VV+A D ++     + +++  K+ +      IA     +     +  
Sbjct: 35  RGTASIGVRTSGGVVLAVDKRI-RSPLMERSSVEKIHKADDHIGIASAGHVADARQLIDL 93

Query: 73  -------ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD--KTITLVITG 123
                   RL  +       L +   +  + +      R     ++IA        +   
Sbjct: 94  ARRRAQINRLRYEERIGVETLTKEITDHIQRYTQVGGARPFGVALIIAGVADGEPRLYET 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
                  E   +A+G+  +   +      S   
Sbjct: 154 DPSGTPYEWKALAVGADRADTRAYLEEHYSETL 186


>gi|226291209|gb|EEH46637.1| proteasome component PRE6 [Paracoccidioides brasiliensis Pb18]
          Length = 269

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  L     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKLCLLDNHVCLA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 89  KARVEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDHGDKVPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERHHKDDMDREATIQLTIKSL 197


>gi|77735425|ref|NP_001029405.1| proteasome subunit alpha type-7 [Bos taurus]
 gi|122140778|sp|Q3ZBG0|PSA7_BOVIN RecName: Full=Proteasome subunit alpha type-7
 gi|73586503|gb|AAI03329.1| Proteasome (prosome, macropain) subunit, alpha type, 7 [Bos taurus]
 gi|296481046|gb|DAA23161.1| proteasome subunit alpha type-7 [Bos taurus]
          Length = 248

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|156089277|ref|XP_001612045.1| proteasome A-type and B-type family protein [Babesia bovis]
 gi|154799299|gb|EDO08477.1| proteasome A-type and B-type family protein [Babesia bovis]
          Length = 236

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 14/173 (8%)

Query: 25  GVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN 84
             VV+A + + +    +   +++K+ +L     +A FAG +ADA  L+ +   + ++Y  
Sbjct: 39  DNVVLAAERKTTTKLQIP-RSSKKILQLDDNMAVA-FAGLNADARVLINKTRLECQRYRL 96

Query: 85  QLLRSSV--ELAKDWRMDKYLRNLEA---------MILIADKT-ITLVITGMGDVLEPEN 132
                +    +AK     +                +I+  D      +       +    
Sbjct: 97  NADEVASVGYIAKYIARLQQKYTHRGGVRLFGVALLIIGYDSNGKPGLYQTEPSGIHSSW 156

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
              +IG G   A            + EE    ++    ++   +  NI +  L
Sbjct: 157 KAQSIGRGSKSAQEFLEINYKEGMNVEESVTLSIKALVEVMEVSAKNIEVAIL 209


>gi|126303098|ref|XP_001376973.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 248

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|195117644|ref|XP_002003357.1| GI17870 [Drosophila mojavensis]
 gi|193913932|gb|EDW12799.1| GI17870 [Drosophila mojavensis]
          Length = 221

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 45/150 (30%), Gaps = 11/150 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++ +  V++A D   +     M+ +  K+ RL    I+A   G   D     + + 
Sbjct: 3   TILGIKGEDCVMLACDTMQAKSVIFMRDDQSKIHRLSDFAILAAI-GDGGDTLQFTDYIA 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADK--TITLVITGMGD 126
           K L+ Y                  K L        R   +M+L          +      
Sbjct: 62  KHLKLYNISNGYHLSPRGAAHFTRKNLADYIRTNTRYQVSMLLAGYDSVEGPDLHFIDSY 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQN 156
                      G G  +  S  +   + + 
Sbjct: 122 GAAMPINHAGHGLGSLFCGSIFQRYWTHEL 151


>gi|311259068|ref|XP_003127920.1| PREDICTED: proteasome subunit alpha type-7-like isoform 1 [Sus
           scrofa]
          Length = 250

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVAIRGTDIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +  N A ++A +A+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIANDNEAIKLAIRAL 197


>gi|239788855|dbj|BAH71086.1| ACYPI000065 [Acyrthosiphon pisum]
          Length = 108

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK 48
           H TT L     G +V+A D + + GQ +     +K
Sbjct: 71  HGTTTLGFLYQGGIVLAVDSRATGGQYIGSQCMKK 105


>gi|58270336|ref|XP_572324.1| proteasome subunit alpha type 5 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134117764|ref|XP_772516.1| hypothetical protein CNBL1310 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255130|gb|EAL17869.1| hypothetical protein CNBL1310 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57228582|gb|AAW45017.1| proteasome subunit alpha type 5, putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 270

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +      V+A + +V     +  ++  K+  +      A  +G +ADA T++E 
Sbjct: 61  GSTTVGITTPHGTVLAVEKRVPS-PLLESSSIEKIMEIDSHIGCA-MSGLTADARTMVEH 118

Query: 75  LEKKLEQYPNQLLRSS---------------VELAKDWRMDKYLRNLEAMILIA--DKTI 117
                + +                          + +       R     +LIA  D+  
Sbjct: 119 ARVTSQMHAFTYDEPIGVESCTQAVCDLALRFGESVEDDDALMSRPFGVALLIAGIDEKG 178

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
             +               AIGSG   A    +     Q +  E   +A K + 
Sbjct: 179 PQLYHTDPSGTFVRYEAKAIGSGSEAAQQGLQDAYHKQMTLAEAQSLALKVLK 231


>gi|197128546|gb|ACH45044.1| putative proteasome 28 kDa subunit-like protein [Taeniopygia
           guttata]
          Length = 248

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV--------ELAKDWRMDKYLRN---LEAMILIADKT-ITLVI 121
           R   + + +   +                K        R    + A+I+  D      + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQNNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|170050622|ref|XP_001861393.1| proteasome subunit alpha type 4 [Culex quinquefasciatus]
 gi|167872194|gb|EDS35577.1| proteasome subunit alpha type 4 [Culex quinquefasciatus]
          Length = 261

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 67/191 (35%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +++A + + +         + K+ +L    +   AG    +     L
Sbjct: 30  HAGTSLGILAKDGILLAAERRNTNKLLDSVIFSEKIYKLNDDMVCSVAGITSDANVLTNL 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     IL           +  
Sbjct: 90  LRVIAQRYQLNYGEAMPCEQLVSHLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNS---AEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S+ +  +  T+ +   A+++A K +S   D+   T+ 
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSSLKQELGDTEITLGQAQDLAVKVLSKTLDMTKLTSE 209

Query: 179 NIVLETLKVGD 189
            I +  L   +
Sbjct: 210 KIEMAVLTREN 220


>gi|118791132|ref|XP_319581.3| AGAP008837-PA [Anopheles gambiae str. PEST]
 gi|116117453|gb|EAA14834.3| AGAP008837-PA [Anopheles gambiae str. PEST]
          Length = 207

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 14/161 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ +R    V++A D   +    V+K +  K+ ++    ++A   G + D     E + 
Sbjct: 5   TLMGIRGPDFVMLAADCTHAHSIMVLKDDEDKILKVSDNLMLATM-GEAGDRVQFTEYIS 63

Query: 77  KKLEQYPNQLLRSSVELAKD---------WRMDKYLRNLEAMILIADK-TITLVITGMGD 126
           K +  Y  +        A           +   +   ++  ++   D+     +      
Sbjct: 64  KNILLYRMRNGYELGPKAAAHFTRRNLADYLRSRTPYHVNLLVGGYDEVDGPQLHYIDYL 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARK 164
                    A G GG +  S          TQ  A EI RK
Sbjct: 124 ANSLPVKHGAHGYGGMFVNSIFDRYHHDKITQKEAYEIFRK 164


>gi|229367772|gb|ACQ58866.1| Proteasome subunit alpha type-4 [Anoplopoma fimbria]
          Length = 261

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 27/197 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQ--------VSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
           HA T L +  +  V++A + +        VS  + + K N            +AG    +
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVSFSEKIYKLN------EDMACSVAGITSDA 83

Query: 66  ADAFTLLERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
                 L  + ++            QL+ +  ++ + +      R     +L        
Sbjct: 84  NVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHY 143

Query: 120 ---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADI 172
              +                IG+  + A+S  +           +A  +A K ++   D+
Sbjct: 144 GFQLYQSDPSGNYGGWKATCIGNNSTAAVSMLKQDFKEGEMTLSTALALAVKVLNKTMDV 203

Query: 173 CVYTNHNIVLETLKVGD 189
              +   + + TL   +
Sbjct: 204 SKLSAEKVEIATLTREN 220


>gi|15225839|ref|NP_180270.1| PAG1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|12644056|sp|O23715|PSA3_ARATH RecName: Full=Proteasome subunit alpha type-3; AltName: Full=20S
           proteasome alpha subunit G-1; AltName: Full=DiDi 17A-2a;
           AltName: Full=Proteasome component 8; AltName:
           Full=Proteasome subunit alpha type-7
 gi|14030729|gb|AAK53039.1|AF375455_1 At2g27020/T20P8.7 [Arabidopsis thaliana]
 gi|3421096|gb|AAC32064.1| 20S proteasome subunit PAG1 [Arabidopsis thaliana]
 gi|3885332|gb|AAC77860.1| 20S proteasome alpha subunit G (PAG1) [Arabidopsis thaliana]
 gi|21617882|gb|AAM66932.1| 20S proteasome subunit C8 (PAG1/PRC8_ARATH) [Arabidopsis thaliana]
 gi|21700783|gb|AAM70515.1| At2g27020/T20P8.7 [Arabidopsis thaliana]
 gi|330252829|gb|AEC07923.1| proteasome subunit alpha type-3 [Arabidopsis thaliana]
          Length = 249

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 60/166 (36%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  +   + ++  + R++  + +   +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVMGVEKLI-ASKMMLPGSNRRIHSVHRHAGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +    +        R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L  ++ + +E   +   I
Sbjct: 151 IEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMTCKEGVIEVAKI 196


>gi|297844574|ref|XP_002890168.1| hypothetical protein ARALYDRAFT_471845 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336010|gb|EFH66427.1| hypothetical protein ARALYDRAFT_471845 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 235

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 68/190 (35%), Gaps = 21/190 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKASNGVVIATEKKLPS-ILVDETSVQKIQHLTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+         +I   ++ 
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEI---SSK 206

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 207 NIEIGKIGAD 216


>gi|308510508|ref|XP_003117437.1| CRE-PAS-7 protein [Caenorhabditis remanei]
 gi|308242351|gb|EFO86303.1| CRE-PAS-7 protein [Caenorhabditis remanei]
          Length = 250

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T++ +R    +V+  D  +S       AN R        N+  G +G+  D F+L  
Sbjct: 33  NAGTMIAIRGKNGIVMVADKVISSKLYTDNANPRMFNV--NDNVGVGVSGNYPDGFSLKN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL----------RNLEAMILIADKTITL-VIT 122
               +  ++                + +Y+              A  +  +K     +  
Sbjct: 91  YAYGEAMKWLKDYREPMPVQNIANAVAEYIHIHTLGISRPFGAGAYFISWNKQTGGRLFL 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                L  E    A+G     A +    L   +   +++ ++A  I
Sbjct: 151 VEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIDELDVQQLVKEAARI 196


>gi|7106389|ref|NP_036099.1| proteasome subunit alpha type-7 [Mus musculus]
 gi|12229952|sp|Q9Z2U0|PSA7_MOUSE RecName: Full=Proteasome subunit alpha type-7; AltName:
           Full=Proteasome subunit RC6-1
 gi|3805978|gb|AAC69150.1| C6-I proteasome chain [Mus musculus]
 gi|14198318|gb|AAH08222.1| Proteasome (prosome, macropain) subunit, alpha type 7 [Mus
           musculus]
 gi|26353648|dbj|BAC40454.1| unnamed protein product [Mus musculus]
 gi|123288536|emb|CAM18352.1| proteasome (prosome, macropain) subunit, alpha type 7 [Mus
           musculus]
 gi|148675358|gb|EDL07305.1| proteasome (prosome, macropain) subunit, alpha type 7, isoform
           CRA_b [Mus musculus]
          Length = 248

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 195


>gi|195170430|ref|XP_002026016.1| GL10238 [Drosophila persimilis]
 gi|198460860|ref|XP_002138918.1| GA24133 [Drosophila pseudoobscura pseudoobscura]
 gi|194110880|gb|EDW32923.1| GL10238 [Drosophila persimilis]
 gi|198137159|gb|EDY69476.1| GA24133 [Drosophila pseudoobscura pseudoobscura]
          Length = 254

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 49/172 (28%), Gaps = 15/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
            + T++ +R    V++A +  ++       A  R        G  +AG          + 
Sbjct: 33  KSGTVIGIRGKDCVILAVEKIITSKLYEPDAAGRIFIVEKNIGMAVAGLVADGNYVADIA 92

Query: 73  ERLEKKLEQYPNQLLR------SSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITG 123
            +      Q   Q++               + +   +R     I++A         +   
Sbjct: 93  RQEAANYRQQFEQVIPLKHLCDRVSAYVHAYTLYSAVRPFGLSIILASWDENDGPQLYKI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                       A G     A +          + EE+ +K    A +I +Y
Sbjct: 153 EPSGSYFGYFACASGKAKQQAKTEMEKSRFVDLNTEELVKK----AGEI-IY 199


>gi|170093417|ref|XP_001877930.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164647789|gb|EDR12033.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 255

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 23/172 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVR-------RLGKGNIIAGFAGSSA 66
           HA T+L V     VV+A + +V+     + +              L   N+I G AG +A
Sbjct: 30  HAGTVLGVLAKDGVVLAAEKKVTGKLLDLSSAKDGGYGGSGEKIYLLNSNVIGGVAGLTA 89

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTI 117
           DA +L+       + +               R+            LR     +L A    
Sbjct: 90  DANSLINFARTAAQSHLLTYNEDIPVELLAQRLCDMKQGYTQFGGLRPFGVSLLYAGYDP 149

Query: 118 TL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                +                IG+    A S  +             + A+
Sbjct: 150 HYHFQLYHSDPSGNYSGWKATCIGANNGTAQSLLKQEYKDDIE----VKDAI 197


>gi|327271880|ref|XP_003220715.1| PREDICTED: proteasome subunit alpha type-7-like [Anolis
           carolinensis]
          Length = 249

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|294925361|ref|XP_002778904.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
 gi|239887750|gb|EER10699.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
          Length = 249

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 51/175 (29%), Gaps = 18/175 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + V     V++AG+ +           + K+  +    +   AG    +      
Sbjct: 30  NAGSTVGVLGKQCVILAGEKKTISKLLESGKASEKIYPIDDHVVCAVAGITSDANVLINQ 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L    ++            +L+ S  ++ + +     LR      L A         +  
Sbjct: 90  LRLSAQRYRYAYQEPIPVEKLVTSICDVKQQYTQFGGLRPFGVSFLFAGYDDHYGFQLYH 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE----IAR---KAMSIAA 170
                        AIG     A    +       S ++    +A+   K+M  A 
Sbjct: 150 TDPSGNLSGWKATAIGVNNQTAQGILKTDWHEDMSTKDCLDLVAKVLVKSMDTAT 204


>gi|2511592|emb|CAA74027.1| multicatalytic endopeptidase complex, proteasome component, alpha
           subunit [Arabidopsis thaliana]
          Length = 249

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 60/166 (36%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  +   + ++  + R++  + +   +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVMGVEKLI-ASKMMLPGSNRRIHSVHRHAGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +    +        R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L  ++ + +E   +   I
Sbjct: 151 IEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMTCKEGVIEVAKI 196


>gi|167999672|ref|XP_001752541.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696441|gb|EDQ82780.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 282

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   + S     + +  +K+ ++     IA  AG +AD   L   
Sbjct: 32  GSAAIGLRSKTHVVLATVNKASSE---LSSYQKKLFKIDNHIGIA-MAGLTADGRVLSRY 87

Query: 75  LEKKL------EQYPNQLLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +        + P  + R  V++A        R  K    +  ++   D+T   +   
Sbjct: 88  MRSECVTHNFVYESPLPVGRLVVQVADKAQVCTQRSWKRPYGVGLLVAGLDETGPHLYQN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA--EEIARKAMSI 168
                  E    AIGS    A +       +       E+ R A+  
Sbjct: 148 CPSGNYFEFHAFAIGSRSQAAKTYLERKFESFMDCSKVELVRHALHA 194


>gi|115447473|ref|NP_001047516.1| Os02g0634900 [Oryza sativa Japonica Group]
 gi|49387541|dbj|BAD25097.1| alpha 2 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|113537047|dbj|BAF09430.1| Os02g0634900 [Oryza sativa Japonica Group]
 gi|215741147|dbj|BAG97642.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765416|dbj|BAG87113.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218191233|gb|EEC73660.1| hypothetical protein OsI_08192 [Oryza sativa Indica Group]
 gi|222623303|gb|EEE57435.1| hypothetical protein OsJ_07639 [Oryza sativa Japonica Group]
          Length = 235

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 69/192 (35%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQSLTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ +QY           QL+R +  + +++     +R     +LIA  D     +   
Sbjct: 90  SRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+          I   + +
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQI---SAN 206

Query: 179 NIVLETLKVGDE 190
           NI +  ++   E
Sbjct: 207 NIEIGVIRSDRE 218


>gi|262401453|gb|ACY66627.1| proteasome subunit beta 5 [Scylla paramamosain]
          Length = 59

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQT 40
          H TT L  +  G  V+A D + + GQ 
Sbjct: 33 HGTTTLGFKFKGGAVLAVDSRATSGQY 59


>gi|261202850|ref|XP_002628639.1| proteasome component PRE6 [Ajellomyces dermatitidis SLH14081]
 gi|239590736|gb|EEQ73317.1| proteasome component PRE6 [Ajellomyces dermatitidis SLH14081]
 gi|239612457|gb|EEQ89444.1| proteasome component PRE6 [Ajellomyces dermatitidis ER-3]
 gi|327350576|gb|EGE79433.1| proteasome subunit alpha type [Ajellomyces dermatitidis ATCC 18188]
          Length = 269

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  L     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKLCMLDNHVCLA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 89  KARLEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDHGDNVPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERHHKDDMDREATIQLTIKSL 197


>gi|195046971|ref|XP_001992246.1| GH24307 [Drosophila grimshawi]
 gi|193893087|gb|EDV91953.1| GH24307 [Drosophila grimshawi]
          Length = 285

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 70/198 (35%), Gaps = 30/198 (15%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            +  +I+ +     VVIA D ++     +++ + + +  +   +II G  G+  D   + 
Sbjct: 80  FNG-SIIFIEGRDFVVIASDNRLITKLDILRKHFK-LFPMTPQSII-GSIGNWGDVVAMT 136

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMILIA------DKTITLVITGM 124
             + ++++ Y     ++    A    +    Y R L   ++I       ++    V    
Sbjct: 137 ALIRRRVQVYEQDNKKTISTEALASMISTLMYNRRLFPCLMITILAGLDNEGKGAVFHFD 196

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS---------------AEEIARKAMSIA 169
                     + IG      L+  R  +   +S               A  IAR     A
Sbjct: 197 EIGNRERCRYLIIGGARDIMLAKLRHSIGEIDSGIIPSDQYQQLTKERAFGIARDCFIHA 256

Query: 170 ADI--CVYTNHNIVLETL 185
           + +   +   + ++++T+
Sbjct: 257 SHLRADI--GNTVMIKTI 272


>gi|37778970|gb|AAP20145.1| 20S proteasome beta 6 subunit [Pagrus major]
          Length = 135

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 18/114 (15%)

Query: 93  LAKDWRMDKYLRNLEAMILIA-----DKTITL-VITGMGDVLEPENGVMAIGSGGSYALS 146
           +A       Y R      +       D+     V +         +   A GS  +    
Sbjct: 10  IAAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAMLQP 69

Query: 147 AARALMS------------TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                +             TQ+ A ++ +     AA+  VYT   + +  +   
Sbjct: 70  LLDNQIGFKNMEGVQHVPLTQDKAVQLVKDVFISAAERDVYTGDALRVCVITKE 123


>gi|303389441|ref|XP_003072953.1| 20S proteasome sububit alpha [Encephalitozoon intestinalis ATCC
           50506]
 gi|303302096|gb|ADM11593.1| 20S proteasome sububit alpha [Encephalitozoon intestinalis ATCC
           50506]
          Length = 232

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 56/191 (29%), Gaps = 19/191 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + +R     ++  + ++ L          K   +    ++ GF+G S D  T++++
Sbjct: 30  GTTTIGIRTKDFAILCSEKKI-LSTLQNPRTVVKHYEIYDHIVL-GFSGISGDTKTIVKK 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE---------------AMILIADKTITL 119
                  + +    ++        +                       ++I+    +   
Sbjct: 88  SRDFCISHMHMYGENASVERLLKYLSSLSLRFGEEDEAKMIFRRPFGVSLIVAGFDSEPR 147

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI--CVYTN 177
           + +             AIGSG                  ++  +KA+   + +       
Sbjct: 148 LYSLDPSGSYVSYKAKAIGSGHEVVEGILENEYEEYKELDQSLKKALYTLSKVMKDKINK 207

Query: 178 HNIVLETLKVG 188
            N+ + T+   
Sbjct: 208 ENVEVVTVTKE 218


>gi|294891066|ref|XP_002773403.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
 gi|239878556|gb|EER05219.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
          Length = 249

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 51/175 (29%), Gaps = 18/175 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + V     V++AG+ +           + K+  +    +   AG    +      
Sbjct: 30  NAGSTVGVLGKQCVILAGEKKTISKLLESGKASEKIYPIDDHVVCAVAGITSDANVLINQ 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L    ++            +L+ S  ++ + +     LR      L A         +  
Sbjct: 90  LRLSAQRYRYAYQEPIPVEKLVTSICDVKQQYTQFGGLRPFGVSFLFAGYDDHYGFQLYH 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE----IAR---KAMSIAA 170
                        AIG     A    +       S ++    +A+   K+M  A 
Sbjct: 150 TDPSGNLSGWKATAIGVNNQTAQGILKTDWHEDMSTKDCLDLVAKVLVKSMDTAT 204


>gi|189196042|ref|XP_001934359.1| proteasome subunit alpha type-5 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187980238|gb|EDU46864.1| proteasome subunit alpha type-5 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 245

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  +      A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATGEGVILGVEKRVTS-TLLETSSVEKIVEIDHHIGCA-MSGLQADARSMIEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVESQNHAFNYAEPLRVESCTQAICDLALRFGEGAEGEESIMSRPFGVALLIAGYDEDG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 152 PSLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEFHKSLTLPEAEVLTLKTLK 204


>gi|282165300|ref|YP_003357685.1| proteasome alpha subunit [Methanocella paludicola SANAE]
 gi|282157614|dbj|BAI62702.1| proteasome alpha subunit [Methanocella paludicola SANAE]
          Length = 256

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 58/167 (34%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T++ ++    + +  D ++S  + +   +  K+ ++            +     + +
Sbjct: 36  RGATVMGLKSKDGIAMIVDKRIST-KLLEAESIEKIFKIDDHIGAVASGLVADGRALVDK 94

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWR-------MDKYLRNLEAMILIA--DKTITLVITG 123
            R+E ++         S   LAK              +R   + +LIA  D+T   +   
Sbjct: 95  ARVEAQVNHITYGEPISIEILAKKISDHIQTFTQYGGVRPYGSALLIAGIDETGQRLFET 154

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMS 167
                  E   ++IG+  +  +       +T  S +E+     +A+ 
Sbjct: 155 DPSGALYEYKAVSIGANRNTVMEMLENRFNTGMSLDEVILLGIEALY 201


>gi|195623644|gb|ACG33652.1| proteasome subunit alpha type 2 [Zea mays]
 gi|195659247|gb|ACG49091.1| proteasome subunit alpha type 2 [Zea mays]
          Length = 235

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQALTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ +QY           QL+R +  + +++     +R     +LIA  D     +   
Sbjct: 90  SRKQAQQYYRLYKEHIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+          I   +++
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQI---SSN 206

Query: 179 NIVLETLKVGDE 190
           NI +  ++   E
Sbjct: 207 NIEIGIIRADRE 218


>gi|149635984|ref|XP_001505399.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit,
           alpha type, 7 [Ornithorhynchus anatinus]
          Length = 248

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|74145096|dbj|BAE27417.1| unnamed protein product [Mus musculus]
          Length = 248

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIAGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 195


>gi|225679479|gb|EEH17763.1| proteasome subunit alpha type-7 [Paracoccidioides brasiliensis
           Pb03]
          Length = 268

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  L     +A FAG +ADA  L++
Sbjct: 29  RGTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKLCLLDNHVCLA-FAGLNADARILVD 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +            +  +
Sbjct: 88  KARVEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDHGDKVPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 148 YQTEPSGIYSAWKANAIGRSSKTVREFLERHHKDDMDREATIQLTIKSL 196


>gi|198474058|ref|XP_001356543.2| GA14463 [Drosophila pseudoobscura pseudoobscura]
 gi|198138230|gb|EAL33607.2| GA14463 [Drosophila pseudoobscura pseudoobscura]
          Length = 206

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 14/163 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ +     +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKASDNLLIST-TGESGDTEQFTEFIS 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIA------DKTITLVITGMGD 126
           K +  Y  +        A      K    YLR+     +        +     +      
Sbjct: 62  KNIALYKMRNGYDLSPRAAAHFTRKNLADYLRSRTPYQVFMFVAGYDETDGAELAFIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                      G G  +  S          +   A +I +K +
Sbjct: 122 ANAKSLNHAGHGYGAMFCSSIYDRYWHPNITQDEAYDIFKKCI 164


>gi|303280147|ref|XP_003059366.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459202|gb|EEH56498.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 235

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L +R    VV+A + ++     V +    K+ +L     I  ++G   D   L  +
Sbjct: 32  GATSLGIRATNGVVLATEKKLPT-TLVDETTVEKIAQLTDEIGI-TYSGMGPDFRVLTRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ + Y           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  TRKETQVYYRTYKELVPCSQLVRETATVMQEFTQRGGVRPFGVSLLMAGFDSNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG   + A +      S     E+    A+
Sbjct: 150 DPSGSYFAWKASAIGKNMTNAKTFLEKRYSEDMELEDAIHTAI 192


>gi|254692831|ref|NP_001157081.1| proteasome subunit alpha type-7-like [Mus musculus]
 gi|26006841|sp|Q9CWH6|PSA7L_MOUSE RecName: Full=Proteasome subunit alpha type-7-like
 gi|12846362|dbj|BAB27139.1| unnamed protein product [Mus musculus]
 gi|109733135|gb|AAI16993.1| Proteasome (prosome, macropain) subunit, alpha type, 8 [Mus
           musculus]
 gi|109733921|gb|AAI16991.1| Proteasome (prosome, macropain) subunit, alpha type, 8 [Mus
           musculus]
          Length = 250

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 24/194 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIS 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAMSIAADICVYT 176
                         AIG                   S    A ++A KA+       V +
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEV----VQS 203

Query: 177 NH-NIVLETLKVGD 189
              NI L  ++   
Sbjct: 204 GGKNIELAIIRRDQ 217


>gi|307201582|gb|EFN81344.1| Proteasome subunit alpha type-7-1 [Harpegnathos saltator]
          Length = 249

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + S+ +   +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGADVVVLGVEKK-SVAKLQEERTVRKICLLDDH-VVMAFAGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R    L + +      R      L+A         + 
Sbjct: 88  RAQIECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLLAGFDYDGVPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                   ST+  + ++A +A+
Sbjct: 148 QTEPSGIYYEWKANATGRSAKTVHEFLEKYYTMEEVSTEKGSIKLAIRAL 197


>gi|45550918|ref|NP_722823.2| proteasome beta4R2 subunit [Drosophila melanogaster]
 gi|33302636|sp|Q9VQE5|PSB2_DROME RecName: Full=Probable proteasome subunit beta type-2
 gi|21428846|gb|AAM50142.1| GH07971p [Drosophila melanogaster]
 gi|45444964|gb|AAF51229.3| proteasome beta4R2 subunit [Drosophila melanogaster]
 gi|220944152|gb|ACL84619.1| CG17302-PA [synthetic construct]
 gi|220953956|gb|ACL89521.1| CG17302-PA [synthetic construct]
          Length = 210

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V++A D   +     MK +  K+ RL   N++A   G   D     + + 
Sbjct: 5   TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMAT-VGDGGDTIQFTDFIS 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADK--TITLVITGMGD 126
           K L  Y           +      K L        R   AM+L          +      
Sbjct: 64  KNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSY 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G G  +  S  +   +++ S E+
Sbjct: 124 GAAQSINHAGHGWGSMFCGSILQRYWNSKLSQED 157


>gi|115453317|ref|NP_001050259.1| Os03g0387100 [Oryza sativa Japonica Group]
 gi|122246952|sp|Q10KF0|PSA2_ORYSJ RecName: Full=Proteasome subunit alpha type-2; AltName: Full=20S
           proteasome alpha subunit B; AltName: Full=20S proteasome
           subunit alpha-2
 gi|158513654|sp|A2YVR7|PSA2_ORYSI RecName: Full=Proteasome subunit alpha type-2; AltName: Full=20S
           proteasome alpha subunit B; AltName: Full=20S proteasome
           subunit alpha-2
 gi|8671494|dbj|BAA96830.1| alpha 2 subunit of 20S proteasome [Oryza sativa Japonica Group]
 gi|50582741|gb|AAT78811.1| proteasome subunit alpha type 2 [Oryza sativa Japonica Group]
 gi|108708524|gb|ABF96319.1| Proteasome subunit alpha type 2, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113548730|dbj|BAF12173.1| Os03g0387100 [Oryza sativa Japonica Group]
 gi|215715199|dbj|BAG94950.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765038|dbj|BAG86735.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218201230|gb|EEC83657.1| hypothetical protein OsI_29423 [Oryza sativa Indica Group]
 gi|222625034|gb|EEE59166.1| hypothetical protein OsJ_11088 [Oryza sativa Japonica Group]
          Length = 235

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 69/192 (35%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQSLTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ +QY           QL+R +  + +++     +R     +LIA  D     +   
Sbjct: 90  SRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+          I   + +
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQI---SAN 206

Query: 179 NIVLETLKVGDE 190
           NI +  ++   E
Sbjct: 207 NIEIGIIRSDRE 218


>gi|12229890|sp|O16812|PSA73_DROVI RecName: Full=Proteasome subunit alpha type-7-1B; AltName:
           Full=Testis-specific proteasome 28 kDa subunit 1B
 gi|2529569|gb|AAC34197.1| testes-specific alpha4 proteasome subunit [Drosophila virilis]
          Length = 245

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 55/176 (31%), Gaps = 20/176 (11%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            + + +R    VV+  + +  +    ++  +RK++++ +      FAG +ADA  L+ R 
Sbjct: 29  GSTVGLRTKECVVLGVEKRA-IDSLQIERTSRKIKKIDQHMA-MTFAGLTADARVLVSRA 86

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKT---ITLVITG 123
           + + + +     R +        + +           R      LI          +   
Sbjct: 87  QVEAQSHRLNFDRPASVEYITRYLARLKQTYTQSVARRPFGVSCLIGGFDEDGRPRLFQT 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADIC 173
               +  E      G  G           +         SA +   +A+  A  + 
Sbjct: 147 DPSGIYYEWSANTTGRLGQTVNEYLEKNTAAISRTPDAASAMKHVVRALFTATSLD 202


>gi|195169048|ref|XP_002025340.1| GL13291 [Drosophila persimilis]
 gi|194108796|gb|EDW30839.1| GL13291 [Drosophila persimilis]
          Length = 237

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TTI  +     V+IA   + + G  +    ++K+ RL      AG AG++ D   +   
Sbjct: 63  GTTIAGLTIRDGVIIATHIKGTSGSMIRSGRSKKIFRLHDNIYAAG-AGTADDIDAVARL 121

Query: 75  LEKKLEQYPNQL 86
           L  +L       
Sbjct: 122 LRAQLNHLRMTT 133


>gi|158293714|ref|XP_315057.4| AGAP004960-PA [Anopheles gambiae str. PEST]
 gi|157016578|gb|EAA10351.5| AGAP004960-PA [Anopheles gambiae str. PEST]
          Length = 259

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 66/191 (34%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +++A + + +         + K+ +L    +   AG    +     L
Sbjct: 30  HAGTSLGILAKDGILLAAERRNTNKLLDNVIFSEKIYKLNDDMVCSVAGITSDANVLTNL 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     IL           +  
Sbjct: 90  LRVIAQRYQLNYGEAMPCEQLVSHLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNS---AEEIARKAMSIAADICVYTNH 178
                         IG+  + A+SA +  +  +  S   A+++A K +S   D+   T+ 
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSALKQELSDSDISLVQAQDLAVKVLSKTLDMTKLTSE 209

Query: 179 NIVLETLKVGD 189
            I +  L   +
Sbjct: 210 KIEMAVLTREN 220


>gi|290985172|ref|XP_002675300.1| predicted protein [Naegleria gruberi]
 gi|284088895|gb|EFC42556.1| predicted protein [Naegleria gruberi]
          Length = 233

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T L ++    VV+A + ++     V   + +KV  L     +  ++G   D+  L ++
Sbjct: 30  GSTSLAIKATNGVVVATEKKLPS-PLVDHNSLQKVTPLTDHIGMV-YSGMGPDSRVLAKQ 87

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K  E+Y           QL++    + +++     +R     +LIA  D T   +   
Sbjct: 88  GRKHAEEYYRIYKERIPVSQLVKHLASVMQEYTQSGGVRPFGVSLLIAGFDDTGPHLYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG     A +      S+    E+    A+
Sbjct: 148 DPSGSYWAWKASAIGKNMVNANTFLEKRYSSDIELEDAIHTAI 190


>gi|212720956|ref|NP_001132248.1| hypothetical protein LOC100193683 [Zea mays]
 gi|242062414|ref|XP_002452496.1| hypothetical protein SORBIDRAFT_04g026920 [Sorghum bicolor]
 gi|194693872|gb|ACF81020.1| unknown [Zea mays]
 gi|194707164|gb|ACF87666.1| unknown [Zea mays]
 gi|195642504|gb|ACG40720.1| proteasome subunit alpha type 2 [Zea mays]
 gi|195644636|gb|ACG41786.1| proteasome subunit alpha type 2 [Zea mays]
 gi|241932327|gb|EES05472.1| hypothetical protein SORBIDRAFT_04g026920 [Sorghum bicolor]
          Length = 235

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQALTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ +QY           QL+R +  + +++     +R     +LIA  D     +   
Sbjct: 90  SRKQAQQYYRLYKEHIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+          I   +++
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQI---SSN 206

Query: 179 NIVLETLKVGDE 190
           NI +  ++   E
Sbjct: 207 NIEIGIIRADRE 218


>gi|195437302|ref|XP_002066579.1| GK24488 [Drosophila willistoni]
 gi|194162664|gb|EDW77565.1| GK24488 [Drosophila willistoni]
          Length = 212

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/158 (11%), Positives = 44/158 (27%), Gaps = 11/158 (6%)

Query: 10  AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
             +M A  ++ +  +  V++A D   S     +K + +K+  +   ++IA     +    
Sbjct: 1   MFQMTADIVIGICCNDFVMMASDTMKSKSYVFLKDDLKKIHNISDHSVIAVMGDGAHALQ 60

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTIT-L 119
            +   +   L  Y  Q        A              +     +  +I   DK     
Sbjct: 61  -ISSYISSNLHLYQIQNGYFPSAEASANFARQSLVTYMKNLVKVRISVLIASYDKQRGAE 119

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
           +                 G     + +  ++      +
Sbjct: 120 LFLIDSLGNSHSVKYAGHGCASGLSNNILQSEWKPDLT 157


>gi|68479070|ref|XP_716469.1| hypothetical protein CaO19.7335 [Candida albicans SC5314]
 gi|46438138|gb|EAK97474.1| hypothetical protein CaO19.7335 [Candida albicans SC5314]
          Length = 253

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 53/192 (27%), Gaps = 17/192 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T + ++    VV+A + + +        N +        G   +G             
Sbjct: 33  GVTAIGIKCGNGVVLATERKANSPLIRNDTNIKVEYITPNIGMTYSGMGPDFRVLVDRAR 92

Query: 74  RLE----KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL--------IADKTITLVI 121
           +L     K++      +     E+AK  +       +    +         +++    + 
Sbjct: 93  KLAHTNYKRIYNEYPPVKIMVQEIAKVMQESTQSGGIRPFGVSLLVGGYDESNEGKFQLY 152

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV---YTNH 178
                         AIG   + A +      +     E+    A+ +A   C+       
Sbjct: 153 QVDPSGSYFPWKATAIGKSSNSAKTFLEKRWNDNLQLEDGIHVAL-LALKECIDGELNGD 211

Query: 179 NIVLETLKVGDE 190
           N+ +  +    E
Sbjct: 212 NLDIAIISDPQE 223


>gi|323451387|gb|EGB07264.1| hypothetical protein AURANDRAFT_28095 [Aureococcus anophagefferens]
          Length = 232

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF--AGSSADAFTLL 72
             T L ++    VV+  D ++S  + +  A+  K+ ++       GF  +G   D   L+
Sbjct: 29  GKTSLGIKAKNGVVLCTDKKLSS-KLIESADVHKLEKITPS---CGFVYSGVGPDYRVLV 84

Query: 73  ERLEKKLEQYP-----NQLLRSSVELAKD----WRMDKYLRNLEAMILIA--DKTITLVI 121
           ++  K+ + Y       + +R+ V+        +     +R     +L+A  D     + 
Sbjct: 85  KKARKQAQAYYLTYRGLKPIRALVQDTAAVCQEYTQSGGVRPFGVSLLVAGFDDEGPQLF 144

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                         AIG     A S      +     ++    A+
Sbjct: 145 QVDPSGAFFGWQASAIGKNSKNAKSFLEKRYNEDVELDDAIHTAL 189


>gi|170029272|ref|XP_001842517.1| proteasome subunit beta type 2 [Culex quinquefasciatus]
 gi|167881620|gb|EDS45003.1| proteasome subunit beta type 2 [Culex quinquefasciatus]
          Length = 205

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 17/169 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ +R    V++A D   +    V+K +  K+ ++    ++A   G   D     E + 
Sbjct: 3   TLMGIRGPDFVMLAADCSHAHSIMVLKDDENKIYKISDNLMMATI-GEPGDRVQFTEYIS 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIAD------KTITLVITGMGD 126
           K +  Y  +        +      K    YLR+     +              +      
Sbjct: 62  KNILLYKMRNGYELGPKSAAHFTRKNLADYLRSRTPYQVNVLVGGYDEADGAQLHYIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADI 172
                    A G GG +  S          TQ  A EI +K +   A+I
Sbjct: 122 ANSLPVKYAAHGYGGLFVSSILDRYHHEKITQEEAYEIMKKGV---AEI 167


>gi|70606428|ref|YP_255298.1| proteasome subunit alpha [Sulfolobus acidocaldarius DSM 639]
 gi|76363302|sp|Q4JB24|PSA_SULAC RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|68567076|gb|AAY80005.1| proteasome alpha subunit [Sulfolobus acidocaldarius DSM 639]
          Length = 242

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T L V+    VV+  + + +     +     K+  L    +   FAG ++D   L++
Sbjct: 35  RGWTTLGVKTKSGVVLLAEKRKATQLLDVDG-IEKIFMLDDH-VGCTFAGLASDGRILID 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
               +  Q+            L +   ++ + +     +R     +++          ++
Sbjct: 93  YARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLL 152

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                        +AIG GG  A              +    +A +A+
Sbjct: 153 MTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKEDLDIQSTILLALRAL 200


>gi|126272316|ref|XP_001376636.1| PREDICTED: similar to Proteasome subunit alpha type 4 (Proteasome
           component C9) (Macropain subunit C9) (Multicatalytic
           endopeptidase complex subunit C9) (Proteasome subunit L)
           [Monodelphis domestica]
          Length = 330

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 99  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 158

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 159 LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 218

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 219 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGGMTLKSALALAIKVLNKTMDVSKLSAE 278

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 279 KVEIATLTREN 289


>gi|17508501|ref|NP_492354.1| Proteasome Beta Subunit family member (pbs-7) [Caenorhabditis
           elegans]
 gi|3892154|emb|CAB03081.1| C. elegans protein F39H11.5, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 236

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 53/175 (30%), Gaps = 23/175 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+  D  VS G+     N  +  ++    ++  F G  AD   L   
Sbjct: 17  GTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDN-VLIAFGGDHADFHWLQNV 75

Query: 75  LEKKL----EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------------DKTIT 118
           +E+++        +   ++           K  +       +             + +  
Sbjct: 76  IERQVLLWKRFDQDIGPKALHGYLTSLLYAKRCKMNPVWNTLVVAGVEEEEKNNKETSTP 135

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMST---QNS---AEEIARKAMS 167
            +          +   +A G G      A            S   AE + RK++ 
Sbjct: 136 FIGVITQKGCAYQVKHIATGLGAFLLNQAVEDEWRKKGEDLSREEAEAVLRKSLE 190


>gi|198435048|ref|XP_002132081.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit,
           alpha type, 3 isoform 1 [Ciona intestinalis]
          Length = 251

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 56/171 (32%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV+A +  ++     + +N R        G  +AG    + +   + 
Sbjct: 33  NSSTAIGIRCRDGVVLAVEKLITSKLHELDSNQRIFNIDKHVGMAVAGLLTDAREIVDIA 92

Query: 73  ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD--KTITLVITGM 124
                   Q          L          + +   +R   A +L+A        +    
Sbjct: 93  RNEASNYRQQYGCPIPLKHLTERVAMYMHAYTLYSSVRPFGASVLLASYLDDSAQMYMID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
              +       A+G     A +    L   + S     R+A++ AA I VY
Sbjct: 153 PSGVPLGYNGCAMGKAKQNAKTEIEKLKLKELS----CREALNEAAKI-VY 198


>gi|148669642|gb|EDL01589.1| mCG144520 [Mus musculus]
          Length = 257

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 24/194 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 37  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIS 94

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 95  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 154

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAMSIAADICVYT 176
                         AIG                   S    A ++A KA+       V +
Sbjct: 155 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEV----VQS 210

Query: 177 NH-NIVLETLKVGD 189
              NI L  ++   
Sbjct: 211 GGKNIELAIIRRDQ 224


>gi|332375765|gb|AEE63023.1| unknown [Dendroctonus ponderosae]
          Length = 248

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 58/169 (34%), Gaps = 17/169 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + +     +V+A + ++     V   +  K+ ++    I + FAG  AD+ TL++ 
Sbjct: 34  GATSIGICTKEGIVLAAEKRLGSKLLV-NDSMDKISKVDTH-IASTFAGLIADSRTLVDH 91

Query: 75  LEKKLEQYPNQLLRS-------------SVELAKDWRMDKYLRNLEAMILIA--DKTITL 119
              + + +     R              ++    D    +  R     +L    DKT   
Sbjct: 92  ARVEAQNFLFTYGRQIRVEDVTQSVANLALHFGDDDSKIRMGRPFGVALLFGGVDKTGPK 151

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           +          +    AIG+    A    +     + +  E  + A++I
Sbjct: 152 LYHLDPSGTFIDCLAKAIGAASDGAEQTLKEKYHAEITLVEGEKLALTI 200


>gi|45382931|ref|NP_989944.1| proteasome subunit alpha type-7 [Gallus gallus]
 gi|12229887|sp|O13268|PSA7_CHICK RecName: Full=Proteasome subunit alpha type-7; AltName:
           Full=GPRO-28
 gi|485265|gb|AAC60206.1| proteasome 28 kDa subunit homolog, similar to Swiss-Prot Accession
           Number P22769 [Gallus gallus]
          Length = 249

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 52/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +     +      + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKAL 195


>gi|167534338|ref|XP_001748847.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772809|gb|EDQ86457.1| predicted protein [Monosiga brevicollis MX1]
          Length = 624

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A+T+L +R    VV A +    L +   K   R+   + +    A FAG  AD  ++++
Sbjct: 370 NASTVLALRGSDGVVFACEN-TILSELYEKNTIRRTFSVDRHIG-AAFAGLLADGRSIVQ 427

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-----------LEAMILIADK-TITLVI 121
               +  +Y             +  +  Y+                ++   D      + 
Sbjct: 428 EARSQALKYKQTWGSPVPVKKLNDELSGYIHQFTLYGAARPAGCSVLLGAYDALEGPALY 487

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       A+G   + A +    L  +     E+ ++A  I
Sbjct: 488 MVEPSGVSWGYYGAALGKNKTAANAEIEKLKPSDKPVRELVKEAARI 534


>gi|225707520|gb|ACO09606.1| Proteasome subunit alpha type 7 [Osmerus mordax]
          Length = 251

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMST-----QNSAEEIARKAM 166
                         AIG              +       N A ++A +A+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIAGDNEAIKLAIRAL 197


>gi|303390170|ref|XP_003073316.1| proteasome subunit beta-type 2 [Encephalitozoon intestinalis ATCC
           50506]
 gi|303302462|gb|ADM11956.1| proteasome subunit beta-type 2 [Encephalitozoon intestinalis ATCC
           50506]
          Length = 197

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 50/159 (31%), Gaps = 10/159 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +R +  V++A D ++S    V+K +  K + +G   +++          T+L   E  
Sbjct: 5   IGIRGNNFVIVAADTKISTSFLVVKEDYEKFQTVGNRIVMSMIGDQGDAFRTMLYVSESA 64

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL-------VITGMGDVLEPE 131
             +     +  S  +      +K  + L    L     +         + +         
Sbjct: 65  YYEEIQNGIELSPSVLAHMIQNKVHKALRKRQLDMSSIVGGKGPEGYDLWSVDRYGAISS 124

Query: 132 NGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
               A G    +         +   +   A  I +K ++
Sbjct: 125 VPFCANGYAAYFVYGIFDREYTEDITIDAALNIIQKCIN 163


>gi|253744018|gb|EET00279.1| 20S proteasome alpha subunit 4 [Giardia intestinalis ATCC 50581]
          Length = 214

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 19/182 (10%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           ++ +   H AV+   T+ + VR    VV+A + + +  +      ++K+  +    IIA 
Sbjct: 18  LIQVEHAHKAVE-RGTSAVAVRSAAGVVLAIERKQTA-RLQDPRASQKIFDVDDH-IIAT 74

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAM 109
           FAG +ADA  L++R   + + Y      +         +   L             +  +
Sbjct: 75  FAGLTADARVLIDRARLECQAYRMTYDVAPSVEIVAKTVASILQSHTHRGGTRPFGVSII 134

Query: 110 ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARK 164
           +   D + + V       +  E   +AIG+     +      +        N A  +A+ 
Sbjct: 135 LAGNDLSGSHVFMCDPSGVYTEWKALAIGNQCVTIIEFLEKKLKESEPQNTNDALSLAKS 194

Query: 165 AM 166
           A+
Sbjct: 195 AL 196


>gi|158301380|ref|XP_321089.3| AGAP001973-PA [Anopheles gambiae str. PEST]
 gi|157012442|gb|EAA01168.3| AGAP001973-PA [Anopheles gambiae str. PEST]
          Length = 236

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 50/155 (32%), Gaps = 7/155 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ +R    VV+A +  ++          R        +I    +G   D   +++
Sbjct: 33  NSGTVIGLRGKDGVVLAVEKLITSKLYEPDCGTRIFTI--DTSIGMAISGMITDGRAVVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
              ++   Y  Q  R       + R+  Y       +  A +    ++            
Sbjct: 91  IARQEAASYRQQNNRPIPLKQLNDRLSSYFHAYT--LYSAVRPFATIVMYYYFQGYFGC- 147

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             A+G     A +    L  +  S +++   A  I
Sbjct: 148 --AVGKAKQTAKTEIEKLKLSDMSVKDLVLTAGKI 180


>gi|157820507|ref|NP_001102354.1| hypothetical protein LOC364814 [Rattus norvegicus]
 gi|149015674|gb|EDL75033.1| similar to Proteasome subunit alpha type 7-like (predicted) [Rattus
           norvegicus]
          Length = 250

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 61/194 (31%), Gaps = 24/194 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIS 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAMSIAADICVYT 176
                         AIG                   S  N A ++A KA+       V +
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDNEAIKLAIKALLEV----VQS 203

Query: 177 NH-NIVLETLKVGD 189
              NI L  ++   
Sbjct: 204 GGKNIELAIIRRDQ 217


>gi|75076683|sp|Q4R7D9|PSA7L_MACFA RecName: Full=Proteasome subunit alpha type-7-like
 gi|67969260|dbj|BAE00983.1| unnamed protein product [Macaca fascicularis]
          Length = 250

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   ++ N A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKAL 197


>gi|15219257|ref|NP_173096.1| PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/
           threonine-type endopeptidase [Arabidopsis thaliana]
 gi|79318062|ref|NP_001031057.1| PAB1 (PROTEASOME SUBUNIT PAB1); endopeptidase/ peptidase/
           threonine-type endopeptidase [Arabidopsis thaliana]
 gi|6093778|sp|O23708|PSA2A_ARATH RecName: Full=Proteasome subunit alpha type-2-A; AltName: Full=20S
           proteasome alpha subunit B; AltName: Full=Proteasome
           component 3
 gi|4966368|gb|AAD34699.1|AC006341_27 Identical to gb|Y13176 Arabidopsis thaliana mRNA for proteasome
           subunit prc3. ESTs gb|H36972, gb|T22551 and gb|T13800
           come from this gene
 gi|12083342|gb|AAG48830.1|AF332467_1 putative multicatalytic endopeptidase [Arabidopsis thaliana]
 gi|2511574|emb|CAA73619.1| multicatalytic endopeptidase [Arabidopsis thaliana]
 gi|3421075|gb|AAC32056.1| 20S proteasome subunit PAB1 [Arabidopsis thaliana]
 gi|21617900|gb|AAM66950.1| multicatalytic endopeptidase [Arabidopsis thaliana]
 gi|222423615|dbj|BAH19776.1| AT1G16470 [Arabidopsis thaliana]
 gi|222424243|dbj|BAH20079.1| AT1G16470 [Arabidopsis thaliana]
 gi|332191336|gb|AEE29457.1| proteasome subunit alpha type-2-A [Arabidopsis thaliana]
 gi|332191337|gb|AEE29458.1| proteasome subunit alpha type-2-A [Arabidopsis thaliana]
          Length = 235

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 21/190 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+ +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKASNGVVIATEKKLPS-ILVDEASVQKIQHLTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+         +I   ++ 
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEI---SSK 206

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 207 NIEIGKIGAD 216


>gi|225703236|gb|ACO07464.1| Proteasome subunit alpha type 7 [Oncorhynchus mykiss]
          Length = 251

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDDH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR-----------MDKYLRNLEAMILIADKT-ITLVI 121
           R   + + +   +                         +    + A+I+  D      + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDCDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +T N + ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEESIATDNESIKLAIKAL 197


>gi|77416969|gb|ABA81880.1| unknown [Solanum tuberosum]
          Length = 235

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 62/163 (38%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D+  L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQTLTPNIGVV-YSGMGPDSRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYYRLYKESIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       A+G   S A +      + +   ++    A+
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEELELDDAVHTAI 192


>gi|71406250|ref|XP_805679.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
 gi|71415362|ref|XP_809750.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70869178|gb|EAN83828.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
 gi|70874180|gb|EAN87899.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
          Length = 206

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA----DAFTLL 72
           T +  R +  V++A  G  +     +     KV +L    ++A    +        +   
Sbjct: 4   TTIAFRCNSFVLVAAAGLNAFYYIKIMDTEDKVTQLDSHKVVACAGENGPRVNFVEYIKC 63

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA---------------DKTI 117
               K++ ++   +  S+        +   LR+ +   L+                  T 
Sbjct: 64  NMALKRMREHGRVIRTSAAASFMRNALAGALRSRDGAYLVNCLLAGYDVAASSDDDIATG 123

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
             +          E      G G S+ ++    L     +A+E  
Sbjct: 124 PHLYYMDYLGTMQEVPYGCHGYGASFVIAMLDRLWRPDLTAQEAV 168


>gi|12229889|sp|O16811|PSA71_DROVI RecName: Full=Proteasome subunit alpha type-7-1; AltName:
           Full=Proteasome 28 kDa subunit 1
 gi|2529567|gb|AAC34196.1| alpha4 proteasome subunit [Drosophila virilis]
          Length = 247

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 54/170 (31%), Gaps = 21/170 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +       RK+  L    ++  FAG + DA  L+ 
Sbjct: 30  KGSTAVGVRGGNCVVLGVEKK-SVAKLQEDRTVRKICVLDH--VVMAFAGLT-DARILIN 85

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
           R + + + +   +              +L + +      R      LI          + 
Sbjct: 86  RAQVECQSHRLNVEDPVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDADGSPYLF 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                 +  E    A G                    T+  A ++A +A+
Sbjct: 146 QTEPSGIFYEYKANATGCSAKTVREFFEKQYREEEVSTERGAVKLAIRAL 195


>gi|289620497|emb|CBI52858.1| unnamed protein product [Sordaria macrospora]
          Length = 104

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 21/48 (43%)

Query: 6  DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG 53
           +      +  + L +      ++AGD +++ G ++      K+ ++G
Sbjct: 33 HRFDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIG 80


>gi|47228214|emb|CAG07609.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 250

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMST-----QNSAEEIARKAM 166
                         AIG              +       N A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIAGDNEAIKLAIKAL 197


>gi|296200855|ref|XP_002747790.1| PREDICTED: hypothetical protein LOC100391324 [Callithrix jacchus]
          Length = 488

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 19/169 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ R
Sbjct: 269 GSCTVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVINR 326

Query: 75  LEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVIT 122
              + + +   +            +A   +            + A            +  
Sbjct: 327 ARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQ 386

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                        AIG G                  T +   ++  KA+
Sbjct: 387 TDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 435


>gi|115437366|ref|XP_001217792.1| proteasome component PRE6 [Aspergillus terreus NIH2624]
 gi|114188607|gb|EAU30307.1| proteasome component PRE6 [Aspergillus terreus NIH2624]
          Length = 266

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 49/160 (30%), Gaps = 14/160 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + +L     +    K+  +    ++A FAG +ADA  L++
Sbjct: 29  RGTCAVGVKGKDIVVLGCEKRSALKLQDTRITPSKIAMVDDHAVLA-FAGLNADARILID 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +         + T+  +
Sbjct: 88  KARLEAQSHRLTVEDPVSIEYITKYIAGVQQRYTQSGGVRPFGISTLVVGFDPNDTVPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                  +       AIG                    E+
Sbjct: 148 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHQDDMDREQ 187


>gi|302811705|ref|XP_002987541.1| hypothetical protein SELMODRAFT_158876 [Selaginella moellendorffii]
 gi|300144695|gb|EFJ11377.1| hypothetical protein SELMODRAFT_158876 [Selaginella moellendorffii]
          Length = 278

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++    VV+A   + S     + +  +K+ ++ +   +A  AG  AD   L + 
Sbjct: 32  GSAAVGLKCKTHVVLASVNKASSE---LSSYQKKLFKIDENIGVA-MAGIIADGRVLCKF 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +         + R  V++A        R  K    +  ++   D+    +   
Sbjct: 88  MRSECIYHQFVFEAPLPVSRLVVQVADKAQVCTQRSWKRPYGVGLLVAGLDEAGPHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       T    S +E+ R A+
Sbjct: 148 CPSGNYYEYYAFAIGSRSQAAKTYLERRFETFKDCSRDELIRHAL 192


>gi|328850288|gb|EGF99454.1| hypothetical protein MELLADRAFT_73374 [Melampsora larici-populina
           98AG31]
          Length = 256

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 49/163 (30%), Gaps = 19/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     +++  + + S  + +  ++  K+  +    +    +G  AD+ T++E 
Sbjct: 34  GSTTIAVTTKEGIILGVERR-SQSKLLESSSIEKIMEIDSH-VGCAVSGLVADSRTMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAK---------------DWRMDKYLRNLEAMILIA--DKTI 117
                + +           +                D       R     +LIA  D+  
Sbjct: 92  ARLVGQNHRFTFDEPIKIESVTQAVCDLALRFGESTDDEDAMMSRPFGVALLIAGCDENG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +  +       S  E
Sbjct: 152 PQLFHADPSGTFMRYDAKAIGSGSEGAQTELQERWHKSMSLLE 194


>gi|307109597|gb|EFN57835.1| hypothetical protein CHLNCDRAFT_56088 [Chlorella variabilis]
          Length = 248

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 49/158 (31%), Gaps = 13/158 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ +R    VV+  +  +     V  +N R         +    AG +AD  +++ 
Sbjct: 33  NSGTVVGIRCKDGVVLGAEKLIISKMLVENSNRRTFPVDRHAGV--ATAGVAADGRSIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   +  QY +             R+  Y+             +  ++    K    +  
Sbjct: 91  RAMSEANQYKSFYGDPIPGHVLAERLGSYVHVFNLYWYVRPYGVSTLLATYGKEGPQLYL 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                        A+G G   A +    L   + S  E
Sbjct: 151 VEPSGTSHRYFGTAVGKGRQGAKNEIEKLKLEEMSCRE 188


>gi|221485164|gb|EEE23454.1| proteasome subunit alpha type, putative [Toxoplasma gondii GT1]
          Length = 344

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 53/175 (30%), Gaps = 22/175 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + +R D  VV+    +          + +K+ ++     +A  +G +ADA  +   
Sbjct: 129 GTCCVGLRSDTHVVLCSLKRAVSKF---AGHHQKLFKIDDHVGVA-MSGITADAKVISNF 184

Query: 75  LEKKLEQYPNQLLRSS-----------VELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +                      A   R  K    +  +    D     +   
Sbjct: 185 MRNECFHHKYVYDAPIPVGRLVLMVADKSQANTQRSGKRPFGVGLLAAGYDDAGPHLFET 244

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEI---ARKAMSI--AAD 171
                  E+  MA G+    + +            S EE+   A KA+    AAD
Sbjct: 245 CPSGNYFESYAMAFGARSQSSKTYLERNFENFPGLSPEELELHAMKALQASLAAD 299


>gi|123502966|ref|XP_001328403.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121911346|gb|EAY16180.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 235

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 50/175 (28%), Gaps = 16/175 (9%)

Query: 5   GDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS 64
              H AV+   TT++  R   ++VIA +             ++        +++  FAG 
Sbjct: 21  DHAHAAVQ-RGTTVVATRSKDMIVIAVEKTAVAKLQDPHTFSKIC--SLDKHVMCAFAGL 77

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD-------------KYLRNLEAMIL 111
            ADA  L++  +++ + +                +               Y  +      
Sbjct: 78  HADARRLIQSGQRQCQSHRLTYEDPISIENIARYIATLQLKNTQSGGARPYGVSTLICGF 137

Query: 112 IADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
               +   +   +      E     IG      +           + EE  + A+
Sbjct: 138 DDMTSQPHIYETLPSGTYAEWKARTIGRHDQTVMEYLEKHYKDDMTDEEAQKLAI 192


>gi|56118656|ref|NP_001007998.1| proteasome alpha 4 subunit [Xenopus (Silurana) tropicalis]
 gi|51703820|gb|AAH80876.1| proteasome (prosome macropain) subunit alpha type 4 [Xenopus
           (Silurana) tropicalis]
 gi|89266778|emb|CAJ83532.1| proteasome (prosome macropain) subunit alpha type 4 [Xenopus
           (Silurana) tropicalis]
          Length = 261

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 59/191 (30%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L        AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNDDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST-QN---SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGDMTLKSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|66827497|ref|XP_647103.1| 20S proteasome subunit alpha-3 [Dictyostelium discoideum AX4]
 gi|166208496|sp|Q27563|PSA3_DICDI RecName: Full=Proteasome subunit alpha type-3
 gi|60475221|gb|EAL73156.1| 20S proteasome subunit alpha-3 [Dictyostelium discoideum AX4]
          Length = 248

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 14/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T++ ++    VV+  +  V        +N R        G  IAGF   +    T  
Sbjct: 33  NSGTLVAIKAKDGVVLGVEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLADARQLITRA 92

Query: 73  ERLEKKLEQYPNQ---LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
               K  +    Q   +   S  +A    M     ++         T          ++E
Sbjct: 93  RSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGIDQYGPQLFLVE 152

Query: 130 PENGV-----MAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
           P          ++G G   A +    +  ++ +  E  ++   I     +Y+
Sbjct: 153 PSGSCVGYFGASLGKGKQAAKNELEKIKFSEMTCREAIKEVSRI-----IYS 199


>gi|307181443|gb|EFN69038.1| Proteasome subunit alpha type-7-1 [Camponotus floridanus]
          Length = 249

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + S+ +   +   RK+  L    +I  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGADVVVLGVEKK-SVAKLQEERTVRKICLLDDH-VIMAFAGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +               L + +      R      L+          + 
Sbjct: 88  RAQVECQSHKLTVEDPVTLEYITRYIAGLKQKYTQSNGRRPFGISCLLTGFDYDGVPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                   ST+    ++A +A+
Sbjct: 148 QTEPSGIYYEWKANATGRSAKTVHEFLEKYYTTEEVSTERGCIKLAIRAL 197


>gi|145592126|ref|YP_001154128.1| proteasome subunit alpha [Pyrobaculum arsenaticum DSM 13514]
 gi|145283894|gb|ABP51476.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
           13514]
          Length = 243

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/171 (11%), Positives = 46/171 (26%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
                + V+    V +A + +  +      ++  K+  +        +G    +      
Sbjct: 34  RGWPTVGVKCRSGVALAAEKR-KISALFDSSSLEKIYIIDDHVAASPSGLLADARILIDY 92

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITG 123
              +        ++      L ++   L + +      R     +LIA        +   
Sbjct: 93  ARDVALSHRFLYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGIDRHGARLYQT 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
               +       AIG+                       E+A KA++ A +
Sbjct: 153 DPSGVYIGYFATAIGAESGTITEFLEKNYKFDIDMGECVELAVKALASAVE 203


>gi|20129563|ref|NP_609804.1| CG17331 [Drosophila melanogaster]
 gi|7298330|gb|AAF53558.1| CG17331 [Drosophila melanogaster]
 gi|21064815|gb|AAM29637.1| RH72196p [Drosophila melanogaster]
 gi|220949490|gb|ACL87288.1| CG17331-PA [synthetic construct]
 gi|220958608|gb|ACL91847.1| CG17331-PA [synthetic construct]
          Length = 201

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 17/169 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ ++    +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLIST-VGESGDTEQFTEFIS 61

Query: 77  KKLEQYPNQLLRSSVEL---------AKDWRMDKYLRNLEAMILIADKTI-TLVITGMGD 126
           K +  Y  +                   ++   +    +   +   D      +      
Sbjct: 62  KNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAGPELTFIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
                      G G  +A S          +   A ++ +K +   A+I
Sbjct: 122 ANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCI---AEI 167


>gi|242040745|ref|XP_002467767.1| hypothetical protein SORBIDRAFT_01g033750 [Sorghum bicolor]
 gi|241921621|gb|EER94765.1| hypothetical protein SORBIDRAFT_01g033750 [Sorghum bicolor]
          Length = 235

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKASNGVVIATEKKLPS-ILVDETSVQKIQALTPNIGVV-YSGMGPDFRVLMRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ +QY           QL+R +  + +++     +R     +LIA  D     +   
Sbjct: 90  SRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       A+G   S A +      +     ++    A+
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAI 192


>gi|238880314|gb|EEQ43952.1| proteasome component Y7 [Candida albicans WO-1]
          Length = 253

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 53/195 (27%), Gaps = 23/195 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T + ++    VV+A + + +        N +        G   +G             
Sbjct: 33  GVTAIGIKCGNGVVLATERKANSPLIRNDTNIKVEYITPNIGMTYSGMGPDFRVLVDRAR 92

Query: 74  RLE----KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL--------IADKTITLVI 121
           +L     K++      +     E+AK  +       +    +         +++    + 
Sbjct: 93  KLAHTNYKRIYNEYPPVKIMVQEIAKVMQESTQSGGIRPFGVSLLVGGYDESNEGKFQLY 152

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV---Y 175
                         AIG   + A +      +     E+   +A  A+      C+    
Sbjct: 153 QVDPSGSYFPWKATAIGKSSNSAKTFLEKRWNDNLQLEDGIYVALLALKE----CIDGEL 208

Query: 176 TNHNIVLETLKVGDE 190
              N+ +  +    E
Sbjct: 209 NGDNLDIAIISDPQE 223


>gi|296222427|ref|XP_002757180.1| PREDICTED: proteasome subunit alpha type-7-like isoform 2
           [Callithrix jacchus]
          Length = 250

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 62/194 (31%), Gaps = 24/194 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +V++  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGANIVILGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  +  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGVPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAMSIAADICVYT 176
                         AIG                   ++ N A ++A KA+       V +
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEV----VQS 203

Query: 177 NH-NIVLETLKVGD 189
              NI +  ++   
Sbjct: 204 GGKNIEIAVIRRNQ 217


>gi|321264506|ref|XP_003196970.1| proteasome subunit alpha type 5 [Cryptococcus gattii WM276]
 gi|317463448|gb|ADV25183.1| Proteasome subunit alpha type 5, putative [Cryptococcus gattii
           WM276]
          Length = 277

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +      V+A + +V     +  ++  K+  +      A  +G +ADA T++E 
Sbjct: 68  GSTTVGITTPHGTVLAVEKRVPS-PLLESSSIEKIMEIDSHIGCA-MSGLTADARTMVEH 125

Query: 75  LEKKLEQYPNQLLRSSVELAK---------------DWRMDKYLRNLEAMILIA--DKTI 117
                + +           +                +       R     +LIA  D+  
Sbjct: 126 ARVTSQMHAFTYDEPIGVESCTQAVCDLALRFGESVEDDDALMSRPFGVALLIAGIDEKG 185

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
             +               AIGSG   A    +     Q +  E   +A K + 
Sbjct: 186 PQLYHTDPSGTFVRYEAKAIGSGSEAAQQGLQDAYHKQMTLAEAQSLALKVLK 238


>gi|167998630|ref|XP_001752021.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162697119|gb|EDQ83456.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 235

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 21/190 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+  K++ L     +  ++G   D+  L+ +
Sbjct: 32  GQTSLGIKASNGVVIATEKKLPS-ILVDEASINKIQSLTPNIGVV-YSGMGPDSRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ + Y           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAQTYQRLYQEPIPLSQLVRETAAVMQEFTQSGGVRPFGVSLLMAGFDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       AIG   S A +      S     E+    A+          I   +  
Sbjct: 150 DPSGSYFSWKASAIGKNVSNAKTFLEKRYSDDMELEDAIHTAILTLKEGFEGQI---SGK 206

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 207 NIEIGIIDEK 216


>gi|119916183|ref|XP_871384.2| PREDICTED: proteasome alpha 7 subunit-like [Bos taurus]
 gi|297489670|ref|XP_002697763.1| PREDICTED: proteasome alpha 7 subunit-like [Bos taurus]
 gi|296473842|gb|DAA15957.1| proteasome alpha 7 subunit-like [Bos taurus]
          Length = 250

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           +   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  KARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +  N A ++A +A+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIANDNEAIKLAIRAL 197


>gi|46254564|gb|AAS86255.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           mauritiana]
          Length = 251

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+         RK+  L K   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSPMQEDRTVRKISLLDKHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
           R + + + +            + R   +L + +      R      L+          + 
Sbjct: 88  RGQMECQSHRLNFDNPVTPEYITRYIAQLKQKYTQCTGRRPFGISCLVGGIDADGSARLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                 +  E   +A G   +                    A ++A +A+
Sbjct: 148 HTEPSGIFYEYKAIATGRSANTVREFFEKAYRDHEVTTKCEAIKLATRAL 197


>gi|225703170|gb|ACO07431.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
          Length = 261

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRSIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|37654720|gb|AAQ96654.1| proteasome alpha 4 subunit [Branchiostoma belcheri tsingtauense]
          Length = 262

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 17/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  +V+A + + +         + K+ +L         AG ++DA  L  
Sbjct: 30  HAGTRLGILANDGIVLAAERRNTHKLLDEVFFSEKIYKLHDDMA-CSVAGITSDANVLTN 88

Query: 74  RLEKKLEQYPNQLLRSSVE-----------LAKDWRMDKYLRNLEAMILIADKTITL-VI 121
            L    ++Y  Q                   A      K    +  + +  DK     + 
Sbjct: 89  ELRLIAQRYILQYQEPIPCEQLVSSLCDIKQAYTQWGGKRPFGVSILYIGWDKHYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTN 177
                          IG+  + A+S  +            A ++A K +S   D+   T 
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAVSMLKQEYKIDEMTMQDALQLAIKVVSKTLDVSKLTP 208

Query: 178 HNIVLETLKVGD 189
             + L TL   +
Sbjct: 209 EEVELATLTREN 220


>gi|84998956|ref|XP_954199.1| proteasome subunit alpha type 5-2 [Theileria annulata]
 gi|65305197|emb|CAI73522.1| proteasome subunit alpha type 5-2, putative [Theileria annulata]
          Length = 254

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 57/196 (29%), Gaps = 24/196 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V+ A + + S    +   +  K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAIAVATKEGVIFASERR-SNSPLLEFVSLEKIMEIDDHIACA-MSGLIADAKTLVDH 91

Query: 75  LEKKLEQYPNQLLRSS------------------VELAKDWRMDKYLRNLEAMILIADKT 116
              +   +                          V   K  +       +  ++   D  
Sbjct: 92  ARSECVNHTFVYNERMGIRSCVESIADLALEFSDVFDTKKKKTMSRPFGVALLVGGIDSE 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADIC 173
             ++          +    AIGS    A S              AE +  + +    +  
Sbjct: 152 GPVIWCVDPSGTIIKYKAAAIGSAQEGAESILLQKYDENMEFSDAEVLVLEILRQVME-E 210

Query: 174 VYTNHNIVLETLKVGD 189
             +  N+ +  ++V D
Sbjct: 211 KMSPKNVEMARIRVDD 226


>gi|209730378|gb|ACI66058.1| Proteasome subunit alpha type-3 [Salmo salar]
          Length = 255

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 41/165 (24%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLVLSKLYEQGSNKRIFNVDRHVGMAVAGLLADARSLSEVA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITG 123
                              L          + +   +R      ++          +   
Sbjct: 93  REEASNFRSNYGHNIPLKHLSERVAMYVHAYTLYSAVRPFGCSFILGSYDQDDGPQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L     +  E+ ++   I
Sbjct: 153 DPSGISYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRELVKEVAKI 197


>gi|241959382|ref|XP_002422410.1| proteasome component, putative [Candida dubliniensis CD36]
 gi|223645755|emb|CAX40417.1| proteasome component, putative [Candida dubliniensis CD36]
          Length = 251

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/189 (10%), Positives = 50/189 (26%), Gaps = 21/189 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T + ++ D  VV+A + + +        N +        G   +G             
Sbjct: 31  GVTAIGIKCDNGVVLATERKSNSPLIRNDTNIKVEYITPNIGMTYSGMGPDFRVLVDRAR 90

Query: 74  RLEKKLEQYPNQLLRSSVEL-------AKDWRMDKYLRNLEAMILIA-----DKTITLVI 121
           +L     +           +        ++      +R     +L+      ++    + 
Sbjct: 91  KLAHSNYKRIYNEYPPVKIMVQEIAKVMQESTQSGGIRPFGVSLLVGGYDETNEGKFQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS--IAADICVYT 176
                         AIG   + A +      +       A  +A  A+   I  ++    
Sbjct: 151 QVDPSGSYFPWKATAIGKTSNSAKTFLEKRWNENLQLEDALHVALLALKESIDGEL---N 207

Query: 177 NHNIVLETL 185
             N+ +  +
Sbjct: 208 GDNLDIAII 216


>gi|229365882|gb|ACQ57921.1| Proteasome subunit alpha type-7 [Anoplopoma fimbria]
          Length = 251

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D     + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDDDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMST-----QNSAEEIARKAM 166
                         AIG              +       N   ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIAGDNETIKLAIKAL 197


>gi|291394216|ref|XP_002713513.1| PREDICTED: proteasome alpha 8 subunit [Oryctolagus cuniculus]
          Length = 250

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +  N A ++A +A+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIANDNEAIKLAIRAL 197


>gi|123449195|ref|XP_001313319.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121895198|gb|EAY00390.1| Family T1, proteasome beta subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 214

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 44/138 (31%), Gaps = 12/138 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+  + DG +++A D  ++ G      N      +    II G +G  AD  TL+E ++ 
Sbjct: 10  IVAAKYDGGILLASDLSITYGSMFRHNNVSHFVEVAPNIII-GASGEFADFQTLIEVIKS 68

Query: 78  -KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITGMGD 126
             L+Q                 + +Y+    + +           I       +      
Sbjct: 69  VILQQQCKHNGEYLTASEVHNYIKRYMYQCRSNMKPLSCKVIVAGINPDGSKFLACTDPY 128

Query: 127 VLEPENGVMAIGSGGSYA 144
               E+  +  G G    
Sbjct: 129 GASWESDHIGTGFGKYLQ 146


>gi|312380775|gb|EFR26678.1| hypothetical protein AND_07082 [Anopheles darlingi]
          Length = 294

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 51/167 (30%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ +R    +V+A +  +S         +R        +I    +G  AD   +++
Sbjct: 74  NSGTVIGLRGKDGIVLAVEKLISSKLYEPDCGSRVFTI--DTSIGMAISGLIADGRAVVD 131

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL------------IADKTITLVI 121
              ++   Y  Q  R+        R+  Y                      +++    + 
Sbjct: 132 IARQEASSYRQQNNRAIPLKQLIDRLASYFHAYTLYSAVRPFGVSVILASWSEENGPEMY 191

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       A+G     A +    L     S +++   A  I
Sbjct: 192 MIDPSGVSCGYFGCAVGKAKQTAKTEIEKLKLADMSVKDLVLTAGKI 238


>gi|241956129|ref|XP_002420785.1| proteasome subunit, putative [Candida dubliniensis CD36]
 gi|223644127|emb|CAX41870.1| proteasome subunit, putative [Candida dubliniensis CD36]
          Length = 196

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 13/155 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           IL ++     ++A     + G +++K    K R L   N+IA + G + D     E ++ 
Sbjct: 4   ILGIKVSDATLVATSKAATRGISILKDTDDKTRHLNAHNLIA-YTGEAGDTVQFAEYVQA 62

Query: 78  KLEQY-PNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMG 125
            ++ Y   +        A                  Y  N              +     
Sbjct: 63  NIQLYSMRENDIELSPKATASFVRNQLASSLRSRKPYQVNCLIGGYDVKTNQPSLNWIDY 122

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              + E    A G    Y  S          + E+
Sbjct: 123 LGTQVELPYGAHGYAAFYTTSLLDKHYRKDMTVED 157


>gi|83286581|ref|XP_730225.1| proteasome subunit alpha type 4 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23489885|gb|EAA21790.1| proteasome subunit alpha type 4 [Plasmodium yoelii yoelii]
          Length = 246

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 48/164 (29%), Gaps = 14/164 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERL 75
            + +  +  V++  D            N  K+ ++       +AG    +          
Sbjct: 34  TIGIITNDGVILGADKVFISKLINKANNFEKIYKIDDHIFCGVAGLNADANILINQSRLY 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMGD 126
            ++     N      QL+    ++ + +     LR      LIA    K    +      
Sbjct: 94  AQRYLYNYNDVEPVAQLVVQICDIKQSYTQYGGLRPYGVSFLIAGYDTKEGYQLYHTDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                    AIG+    A S  +       + +E   +A K ++
Sbjct: 154 GNYSGWFATAIGTNNLTASSILKQEWKKDMTLQEGLLLAIKTLA 197


>gi|324518614|gb|ADY47154.1| Proteasome subunit alpha type-7 [Ascaris suum]
          Length = 257

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 63/195 (32%), Gaps = 24/195 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VVI  + + S+         RK+  + +  ++A FAG SADA  L++
Sbjct: 29  KGSTAVGVRGRNCVVIGVEKK-SIPTLQDDRTVRKIHSIDEHVMLA-FAGLSADARVLVD 86

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + Y   L         +  +A   +            +              + 
Sbjct: 87  RARVECQSYKLTLEDPVTVGYIARFIANTKQRFTQSPGRRPFGISMLIGGFDFDGTPRLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICVYT 176
                    E    + G G            S      + S  ++  +++S      V +
Sbjct: 147 KTEPSGAYYEYFANSTGRGEKPVREYLEEHYSDETIIDEASVLKLVVRSLSQV----VQS 202

Query: 177 N-HNIVLETLKVGDE 190
              NI +  +K  DE
Sbjct: 203 GAQNIEIAVMKPSDE 217


>gi|157125112|ref|XP_001660626.1| proteasome subunit alpha type [Aedes aegypti]
 gi|108873757|gb|EAT37982.1| proteasome subunit alpha type [Aedes aegypti]
          Length = 261

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 67/191 (35%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     +++A + + +         + K+ +L    +   AG    +     L
Sbjct: 30  HAGTSLGILAKDGILLAAERRNTNKLLDSVIFSEKIYKLNDDMVCSVAGITSDANVLTNL 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     IL           +  
Sbjct: 90  LRVIAQRYQLNYGEAMPCEQLVSHLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM-STQNS---AEEIARKAMSIAADICVYTNH 178
                         IG+  + A+SA +  +  ++ +   A+++A K +S   D+   T+ 
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSALKQELGDSEITLVQAQDLAVKVLSKTLDMTKLTSE 209

Query: 179 NIVLETLKVGD 189
            I +  L   +
Sbjct: 210 KIEMAVLTREN 220


>gi|194854881|ref|XP_001968440.1| GG24868 [Drosophila erecta]
 gi|190660307|gb|EDV57499.1| GG24868 [Drosophila erecta]
          Length = 215

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 44/164 (26%), Gaps = 16/164 (9%)

Query: 17  TILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TIL V+ +  V++A D         +    A+  R       +    G   D     + +
Sbjct: 3   TILGVKGNDFVILASDTMNAKSVMWLDDEKAKTHRITDN--CMMSTIGDCGDCLQFSDFI 60

Query: 76  EKKLEQYPNQLLRSSVELAK---------DWRMDKYLRNLEAMILIAD-KTITLVITGMG 125
            + ++ Y                       +        +  ++   D  T   +     
Sbjct: 61  LRNMDLYKVTNGYDLTVRGAVHFIRSNLSAYLRSNMKYQVALLVGGFDLNTGPELHYIDQ 120

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                       G+G ++          T  +   A ++ +K +
Sbjct: 121 YGNSIPIRYGGHGAGINFCTPIFEEFYRTHMNTQAAYDVIKKCV 164


>gi|116283481|gb|AAH14999.1| PSMA7 protein [Homo sapiens]
          Length = 238

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|268529816|ref|XP_002630034.1| C. briggsae CBR-PAS-7 protein [Caenorhabditis briggsae]
 gi|187028686|emb|CAP32213.1| CBR-PAS-7 protein [Caenorhabditis briggsae AF16]
          Length = 250

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 54/166 (32%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T++ +R    +V+  D  +S       AN R        N+  G AG+  D F+L  
Sbjct: 33  NAGTMIAIRGKNGIVMVADKVISSKLYTDNANPRMFNV--NDNVGVGVAGNYPDGFSLKN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL----------RNLEAMILIADKTITL-VIT 122
               +  ++                + +Y+              A  +  +K     +  
Sbjct: 91  YAYGEAMKWLKDYREPMPVQNISNAVAEYIHIHTLGISRPFGAGAFFVAWNKQSGGRLFL 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                L  E    A+G     A +    L   +   +++ ++A  I
Sbjct: 151 VEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIDELDMQQLVKEAARI 196


>gi|1408304|gb|AAB03671.1| PrtD [Dictyostelium discoideum]
          Length = 248

 Score = 50.0 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 14/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T++ ++    VV+  +  V        +N R        G  IAGF   +    T  
Sbjct: 33  NSGTLVAIKAKDGVVLGVEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLADARQLITRA 92

Query: 73  ERLEKKLEQYPNQ---LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
               K  +    Q   +   S  +A    M     ++         T          ++E
Sbjct: 93  RSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGIDQYGPQLFLVE 152

Query: 130 PENGV-----MAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
           P          ++G G   A +    +  ++ +  E  ++   I     +Y+
Sbjct: 153 PSGSCVGYFGASLGKGKQAAKNELEEIRFSEMTCREAIKEVSRI-----IYS 199


>gi|46254566|gb|AAS86256.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           mauritiana]
 gi|46254568|gb|AAS86257.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           mauritiana]
          Length = 251

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+         RK+  L K   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSPMQEDRTVRKISMLDKHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
           R + + + +            + R   +L + +      R      L+          + 
Sbjct: 88  RGQMECQSHRLNFDNPVTPEYITRYIAQLKQKYTQCTGRRPFGISCLVGGIDADGSARLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                 +  E   +A G   +                    A ++A +A+
Sbjct: 148 HTEPSGIFYEYKAIATGRSANTVREFFEKAYRDHEVTTKCEAIKLATRAL 197


>gi|328768529|gb|EGF78575.1| hypothetical protein BATDEDRAFT_30482 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 194

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 45/163 (27%), Gaps = 15/163 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V+ A D   +    V+        R    + +  ++G + D     E ++  
Sbjct: 5   LAITGKDFVLTAADD-TTARSIVVMKRGEDKSRELTNHTLMVYSGEAGDTVQFAEYIQCN 63

Query: 79  LEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADKTI--TLVITGMGDV 127
              +  +        A               +   ++  +I  A+       +       
Sbjct: 64  SRLHSIRHGIELSTNAIASFTRMELATSLRSRNPYHVNVLIAGANPKTGAPELYWIDYIS 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
              +    A G    + LS          + EE   + +K ++
Sbjct: 124 NMSKLKFAAHGYASYFCLSTMDRYWHENITQEEAIALLKKCLA 166


>gi|145481009|ref|XP_001426527.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393602|emb|CAK59129.1| unnamed protein product [Paramecium tetraurelia]
          Length = 233

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 55/193 (28%), Gaps = 26/193 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG--KGNIIAGFAGSSADAFTL 71
                + VR   ++V+  + + +        N + ++++     N+   F+G +ADA  L
Sbjct: 28  RGLCCVGVRGKDIIVLGVEKKATSKL----QNVKTIKKVYQLDNNLCMTFSGLNADARIL 83

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------EAMILIA------DKTITL 119
             +   + +QY                  +  +            +        ++    
Sbjct: 84  ANQTRLQCQQYKIYYEDDPSVDYIAKFTSQQQQKFTQRGGARPYGISTLIAGFDNQNKPK 143

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
           +          E    ++G                    ++   +  KA+    +    +
Sbjct: 144 LFQTDPSGACSEWKATSLGKSAKQVKDFLEKHWREGLHEKDALLLTTKALMDVVE----S 199

Query: 177 NH-NIVLETLKVG 188
            + NI L  +K  
Sbjct: 200 GNKNIELCVIKKN 212


>gi|209735970|gb|ACI68854.1| Proteasome subunit alpha type-7 [Salmo salar]
          Length = 246

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + + ++ +       RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKNVVVLGVEKK-TVAKLQDDRTVRKICALDDN-VFMAFAGLTADARIVVN 85

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R   + + +   +          R    + + +      R      LI          + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRFISSIKQRYTQSNGRRPFGISSLIVGFDFDGTPHLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                         AIG                    +     ++A +A+
Sbjct: 146 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYKEEHMESDTDTIKLAIRAL 195


>gi|332858896|ref|XP_514761.3| PREDICTED: proteasome subunit alpha type-7 [Pan troglodytes]
          Length = 248

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|154317794|ref|XP_001558216.1| alpha-type of subunit of 20S proteasome [Botryotinia fuckeliana
           B05.10]
 gi|150843538|gb|EDN18731.1| alpha-type of subunit of 20S proteasome [Botryotinia fuckeliana
           B05.10]
          Length = 267

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/163 (11%), Positives = 43/163 (26%), Gaps = 14/163 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + S  +            L   ++   FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGKDIVVLGCEKR-SAMKLQDTRITPSKIGLVDTHVCLAFAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +         +     +
Sbjct: 89  KARLEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDPNDQTPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                  +       AIG                    E   +
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKDDMDREATIK 191


>gi|225708302|gb|ACO09997.1| Proteasome subunit alpha type 3 [Osmerus mordax]
          Length = 255

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L E
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEQGSNKRIFNIDRHVGMA-VAGLLADARSLSE 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIAD-KTITLVI 121
              ++   + +             R+  Y+                ++   D      + 
Sbjct: 91  VAREEASNFRSNYGHDIPLKHLSDRVAMYVHAYTLYSAVRPFGCSFILGSYDQDDGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L     +  E+ ++   I
Sbjct: 151 MVDPSGISYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRELVKEVAKI 197


>gi|195122841|ref|XP_002005919.1| GI20743 [Drosophila mojavensis]
 gi|193910987|gb|EDW09854.1| GI20743 [Drosophila mojavensis]
          Length = 253

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            + T++ +R    VV+A +  V   Q      A ++  + K   +A  AG  AD   + +
Sbjct: 33  RSGTVIGIRGKDCVVLAVEKIV-ADQLYEPDAASRIFTIEKNIGMA-IAGLMADGNFVAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----------ILIADK-TITLVI 121
              ++   +  Q  R+        R+  YL                 +   D+     + 
Sbjct: 91  IARQEAANFRQQFERTIPLKHLCDRVSGYLHAYTLYSAVRPFGLSVILASWDEVDGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                         A G     A +       +  + EE+ +
Sbjct: 151 KIEPSGNSFGYYACASGKAKQQAKTEMEKFKFSDMTTEELVK 192


>gi|224009700|ref|XP_002293808.1| proteasome subunit alpha type 5 [Thalassiosira pseudonana CCMP1335]
 gi|220970480|gb|EED88817.1| proteasome subunit alpha type 5 [Thalassiosira pseudonana CCMP1335]
          Length = 244

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 66/196 (33%), Gaps = 25/196 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++     ++A + +++    +  ++  K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAVGLQTKSGSILAVEKRLTS-PLLEPSSVEKIAEIDVHIG-AAMSGLVADARTLVDH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDW----------------RMDKYLRNLEAMILIA---DK 115
              + + +      +    A                   +  +  R     +LIA   D 
Sbjct: 92  ARVEAQNHRFTYDEAIGVEALTQGVCDLALSFGEGSDGDKDKRMSRPFGVALLIAGHDDL 151

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
               +          +    AIG+G   A S+     +   +   AEE+A   +    + 
Sbjct: 152 KGHQLFFSDPSGTFVQYKAKAIGAGSEGAQSSLMESYNEDMTLEEAEELALSVLKQVMEE 211

Query: 173 CVYTNHNIVLETLKVG 188
            + T  N+ L  +   
Sbjct: 212 KIST-ENVELARVTEE 226


>gi|124513788|ref|XP_001350250.1| proteasome subunit, putative [Plasmodium falciparum 3D7]
 gi|23615667|emb|CAD52659.1| proteasome subunit, putative [Plasmodium falciparum 3D7]
          Length = 246

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 42/154 (27%), Gaps = 11/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERL 75
            + +     V++  D            N  K+ ++ K     +AG    +          
Sbjct: 34  TIGLITKDGVILGADKVFISKLIDKANNYEKIYKIDKHIFCGVAGLNADANILINQSRLY 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMGD 126
            ++     N      QL+    ++ + +     LR      LI     K    +      
Sbjct: 94  AQRYLYNYNEVQPVSQLVVQICDIKQSYTQYGGLRPYGVSFLIGGYDTKDGYQLYHTDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                    AIG+    A S  +       + EE
Sbjct: 154 GNYSGWFATAIGTNNLTASSVLKQEWKNDMTLEE 187


>gi|146079677|ref|XP_001463827.1| proteasome alpha 7 subunit [Leishmania infantum JPCM5]
 gi|134067915|emb|CAM66196.1| putative proteasome alpha 7 subunit [Leishmania infantum JPCM5]
 gi|322497214|emb|CBZ32287.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 247

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 16/185 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     VVIA + + S  +       RK+ ++     +A FAG SADA  L+ + + +
Sbjct: 33  VGVLGSDCVVIAVEKK-SAVKLQDSRTIRKIYKVDAHIYLA-FAGLSADARVLINKAQLE 90

Query: 79  LEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMGD 126
            +++            L+R    + +        R      +I          +      
Sbjct: 91  CQRFSLNYEDTIDVDMLVRYVAGVQQKSTQSGGSRPFGVATVIGGFNEDGKPHLWKTDPS 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-NIVLETL 185
            +      +AIG      +           S +E    A+    ++ V +   NI L  L
Sbjct: 151 GMCSAWRAVAIGRHDQTVIEYMEKNYKDGMSRDECVHFAIKSLLEV-VESGSRNIELLVL 209

Query: 186 KVGDE 190
           +  +E
Sbjct: 210 QYKEE 214


>gi|56550075|ref|NP_001008218.1| proteasome subunit alpha type-7 [Rattus norvegicus]
 gi|149034051|gb|EDL88834.1| rCG38543, isoform CRA_a [Rattus norvegicus]
          Length = 248

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 195


>gi|164661487|ref|XP_001731866.1| hypothetical protein MGL_1134 [Malassezia globosa CBS 7966]
 gi|159105767|gb|EDP44652.1| hypothetical protein MGL_1134 [Malassezia globosa CBS 7966]
          Length = 250

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 56/171 (32%), Gaps = 19/171 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
            +T + +      V+  + +V     +  ++  K+  +      A  +G +ADA T+++ 
Sbjct: 34  GSTTVGIVTKEGAVLGVEKRV-QSSLLENSSIEKIMEIDSHLG-AAMSGLTADARTMIDH 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWR---------------MDKYLRNLEAMILIADKTI 117
            R+  +  ++          +A+                  +      +  +I+  D+  
Sbjct: 92  ARVTSQNHRFVYDEEIKVESIAQAVCDLALRFGENTEDDEALMSRPFGVALLIIGIDENG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             +               AIGSG   A    +   S   S  + +  A+ +
Sbjct: 152 PQLFHADPSGTFVRYDAKAIGSGSEGAQGELQEKYSKDLSLRDASLLALRV 202


>gi|156050233|ref|XP_001591078.1| hypothetical protein SS1G_07703 [Sclerotinia sclerotiorum 1980]
 gi|154692104|gb|EDN91842.1| hypothetical protein SS1G_07703 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 267

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/163 (11%), Positives = 43/163 (26%), Gaps = 14/163 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + S  +            L   ++   FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGKDIVVLGCEKR-SAMKLQDTRITPSKIGLVDTHVCLAFAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +         +     +
Sbjct: 89  KARLEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDPNDQTPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                  +       AIG                    E   +
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKDDMDREATIK 191


>gi|71032913|ref|XP_766098.1| proteasome subunit alpha type 5 [Theileria parva strain Muguga]
 gi|68353055|gb|EAN33815.1| proteasome subunit alpha type 5, putative [Theileria parva]
          Length = 254

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 57/196 (29%), Gaps = 24/196 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V+ A + + S    +   +  K+  +      A  +G  ADA TL++ 
Sbjct: 34  GSTAIAVATKEGVIFASERR-SNSPLLEFVSLEKIMEIDDHIACA-MSGLIADAKTLVDH 91

Query: 75  LEKKLEQYPNQLLRSS------------------VELAKDWRMDKYLRNLEAMILIADKT 116
              +   +                          V   K  +       +  ++   D  
Sbjct: 92  ARSECVNHTFVYNERMGIRSCVESIADLALEFSDVFDTKKKKTMSRPFGVALLVGGIDVE 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADIC 173
             ++          +    AIGS    A S              AE +  + +    +  
Sbjct: 152 GPVIWCVDPSGTIIKYKAAAIGSAQEGAESILLQKYDENMEFSDAEVLVLEILRQVME-E 210

Query: 174 VYTNHNIVLETLKVGD 189
             +  N+ +  ++V D
Sbjct: 211 KMSPKNVEMARIRVDD 226


>gi|225703246|gb|ACO07469.1| Proteasome subunit alpha type 3 [Oncorhynchus mykiss]
          Length = 255

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 41/165 (24%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLVLSKLYEQGSNKRIFNVDRHVGMAVAGLLADARSLSEVA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITG 123
                              L          + +   +R      ++          +   
Sbjct: 93  REDASNFRSNYGHNIPLKHLSERVAMYVHAYTLYSAVRPFGCSFILGSYDQDDGPQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L     +  E+ ++   I
Sbjct: 153 DPSGISYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRELVKEVAKI 197


>gi|168049194|ref|XP_001777049.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671614|gb|EDQ58163.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 250

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    VV+  +  +S    +  +N R++  + +   +A  AG ++D   ++ 
Sbjct: 33  NSGTVVGIKCKDGVVLGVEKLISSKMLLEGSN-RRIHAVDRHAAMA-MAGLASDGRQIVT 90

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
           +   +   Y           +L       A    +  +LR   +  ++   D+    +  
Sbjct: 91  KARAEASDYRSFYGEEVPIGELCERVAHYAHLCTLYWWLRPFGSSAILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       A+G G   A +    L  T+ +  +       I
Sbjct: 151 IEPSGVAYRYFGAAVGKGRQAAKTEIEKLNLTEMTCRQGVIAVAKI 196


>gi|30583771|gb|AAP36134.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7
           [synthetic construct]
 gi|61373076|gb|AAX43972.1| proteasome subunit alpha type 7 [synthetic construct]
 gi|61373078|gb|AAX43973.1| proteasome subunit alpha type 7 [synthetic construct]
          Length = 249

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|322489224|emb|CBZ24479.1| putative proteasome alpha 7 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 247

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 16/185 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     VVIA + + S  +       RK+ ++     +A FAG SADA  L+ + + +
Sbjct: 33  VGVLGGDCVVIAVEKK-SAVKLQDSRTIRKIYKVDAHIYLA-FAGLSADARVLINKAQLE 90

Query: 79  LEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMGD 126
            +++            L+R    + +        R      +I          +      
Sbjct: 91  CQRFSLNYEDTMDVDMLVRYVAGVQQKSTQSGGSRPFGVATVIGGFNEDGKPHLWKTDPS 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-NIVLETL 185
            +      +AIG      +           S +E    A+    ++ V +   NI L  L
Sbjct: 151 GMCSAWRAVAIGRHDQTVIEYMEKSYKDGMSRDECVHFAIKSLLEV-VESGSRNIELLVL 209

Query: 186 KVGDE 190
           +  +E
Sbjct: 210 QYKEE 214


>gi|324521348|gb|ADY47837.1| Proteasome subunit alpha type-7 [Ascaris suum]
          Length = 260

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 51/165 (30%), Gaps = 20/165 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VVI  + + S+         RK+  + +  ++A FAG SADA  L++
Sbjct: 29  KGSTAVGVRGRNCVVIGVEKK-SIPTLQDDRTVRKIHSIDEHVMLA-FAGLSADARVLVD 86

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD- 126
           R   + + Y   L         +  +A   +            +           G    
Sbjct: 87  RARVECQSYKLTLEDPVTVGYIARFIANTKQRFTQSPGRRPFGISMLIG-GFDYDGTPRL 145

Query: 127 -VLEPENGVM-----AIGSGGSYALSAARALMSTQNSAEEIARKA 165
              EP          + G G                S E I  +A
Sbjct: 146 FKTEPSGAFYEYFANSTGRGEKPVREYLEEHY----SDETIVDEA 186


>gi|68066270|ref|XP_675116.1| proteasome subunit [Plasmodium berghei strain ANKA]
 gi|56494107|emb|CAI00054.1| proteasome subunit, putative [Plasmodium berghei]
          Length = 246

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 14/164 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERL 75
            + +  +G V++  D            N  K+ ++       +AG    +          
Sbjct: 34  TIGIITNGGVILGADKVFISKLINKANNFEKIYKIDDHIFCGVAGLNADANILINQSRLY 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMGD 126
            ++     N      QL+    ++ + +     LR      LIA    K    +      
Sbjct: 94  AQRYLYNYNDVEPVAQLVVQICDIKQSYTQYGGLRPYGVSFLIAGYDTKEGYQLYHTDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                    AIG+    A S  +       + +E   +A K ++
Sbjct: 154 GNYSGWFATAIGTNNLTASSILKQEWKKDMTLQEGLLLAIKTLA 197


>gi|194770481|ref|XP_001967321.1| GF13881 [Drosophila ananassae]
 gi|190618083|gb|EDV33607.1| GF13881 [Drosophila ananassae]
          Length = 210

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 47/154 (30%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V++A D   +     MK +  K+ RL   N++A   G   D     + + 
Sbjct: 5   TILGIKGIDFVMLASDTMQAKSLIFMKDDQSKIHRLSDFNMMAT-VGDGGDTIQFTDYIS 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADK--TITLVITGMGD 126
           K L  Y           A      K L        R   AM+L          +      
Sbjct: 64  KNLHLYKIAHGYHLSAKAAAHFTRKNLADYIRTNTRYHVAMLLAGYDAAEGPDLHYIDSL 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G G  +  S  +    ++ +  E
Sbjct: 124 GAAQSINHAGHGWGSMFCGSILQRFWHSKLTQAE 157


>gi|156540147|ref|XP_001599537.1| PREDICTED: similar to proteasome alpha 3 subunit, partial [Nasonia
           vitripennis]
          Length = 219

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 39/161 (24%), Gaps = 9/161 (5%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T++ ++   VVV A +  ++        N R        G  I+G    +          
Sbjct: 1   TVIGLKGKDVVVFAVEKLITSKLYEPFTNKRNFNVDEHIGMAISGLISDARQIVETSRLE 60

Query: 76  EKKLEQYPN--------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
                                S    A              ++         +       
Sbjct: 61  AANYRAQYGTSIPLKYLNDRISMYMHAYTLYSAVRPYGCSIILSSYQDDNPEMYMIDPSG 120

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           +       AIG     A +    L  +    ++I R+A  I
Sbjct: 121 VSYGYYGCAIGKAKQAAKTEIEKLKLSTMDYKDIVREAARI 161


>gi|41615303|ref|NP_963801.1| proteasome subunit alpha [Nanoarchaeum equitans Kin4-M]
 gi|40069027|gb|AAR39362.1| NEQ521 [Nanoarchaeum equitans Kin4-M]
          Length = 250

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 14/164 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLER 74
           T + +     V++ GD ++   + V+ ++  KV  +    I   AG  G           
Sbjct: 40  TAIGMLYKTGVLVIGDKKIVE-KFVIPSSIEKVYIVDDHVIAAPAGIIGDGRVLIERARV 98

Query: 75  LEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGD 126
           + +  + +         L++   ++ +++     +R     I+ A  D T   +      
Sbjct: 99  IAQTYKYFYGHPIDIRGLVKEIADIKQEYTQIGGVRPFGVSIIFAGIDDTGKHIFVTEPG 158

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
            +  E  +  IG G    L       +   S   A E+  KA+ 
Sbjct: 159 GMFWEYKLAVIGEGEQKVLDYLGKEYNENLSLKKAIELGLKALY 202


>gi|4506189|ref|NP_002783.1| proteasome subunit alpha type-7 [Homo sapiens]
 gi|12643540|sp|O14818|PSA7_HUMAN RecName: Full=Proteasome subunit alpha type-7; AltName:
           Full=Proteasome subunit RC6-1; AltName: Full=Proteasome
           subunit XAPC7
 gi|21465645|pdb|1IRU|D Chain D, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465659|pdb|1IRU|R Chain R, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|2555136|gb|AAB81515.1| proteasome subunit XAPC7 [Homo sapiens]
 gi|12314028|emb|CAC04017.1| proteasome (prosome, macropain) subunit, alpha type, 7 [Homo
           sapiens]
 gi|13325216|gb|AAH04427.1| Proteasome (prosome, macropain) subunit, alpha type, 7 [Homo
           sapiens]
 gi|30583169|gb|AAP35829.1| proteasome (prosome, macropain) subunit, alpha type, 7 [Homo
           sapiens]
 gi|60655637|gb|AAX32382.1| proteasome subunit alpha type 7 [synthetic construct]
 gi|119595804|gb|EAW75398.1| hCG41772, isoform CRA_b [Homo sapiens]
 gi|123994157|gb|ABM84680.1| proteasome (prosome, macropain) subunit, alpha type, 7 [synthetic
           construct]
 gi|124126867|gb|ABM92206.1| proteasome (prosome, macropain) subunit, alpha type, 7 [synthetic
           construct]
 gi|189065239|dbj|BAG34962.1| unnamed protein product [Homo sapiens]
 gi|261859954|dbj|BAI46499.1| proteasome (prosome, macropain) subunit, alpha type, 7 [synthetic
           construct]
          Length = 248

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|11513995|pdb|1G0U|D Chain D, A Gated Channel Into The Proteasome Core Particle
 gi|11514009|pdb|1G0U|R Chain R, A Gated Channel Into The Proteasome Core Particle
          Length = 241

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 9/154 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     VV+  + + +    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGIATKEGVVLGVEKRATS-PLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
                    Y ++      L +S  +LA    M +       +          +      
Sbjct: 93  RTAAVTHNLYYDEDINVESLTQSVCDLAAAAAMSRPFGVALLIAGHDADDGYQLFHAEPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                    AIGSG   A +       +  + +E
Sbjct: 153 GTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKE 186


>gi|209738180|gb|ACI69959.1| Proteasome subunit alpha type-3 [Salmo salar]
 gi|223647206|gb|ACN10361.1| Proteasome subunit alpha type-3 [Salmo salar]
 gi|223673081|gb|ACN12722.1| Proteasome subunit alpha type-3 [Salmo salar]
          Length = 255

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 41/165 (24%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLVLSKLYEQGSNKRIFNVDRHVGMAVAGLLADARSLSEVA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITG 123
                              L          + +   +R      ++          +   
Sbjct: 93  REEASNFRSNYGHNIPLKYLSERVAMYVHAYTLYSAVRPFGCSFILGSYDQDDGPQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L     +  E+ ++   I
Sbjct: 153 DPSGISFGYWGCAIGKAKQAAKTEIEKLQMKDMTCRELVKEVAKI 197


>gi|19075820|ref|NP_588320.1| 20S proteasome component alpha 2, Pre8 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|12229907|sp|O94579|PSA2_SCHPO RecName: Full=Probable proteasome subunit alpha type-2
 gi|3790251|emb|CAA21440.1| 20S proteasome component alpha 2, Pre8 (predicted)
           [Schizosaccharomyces pombe]
          Length = 245

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 58/189 (30%), Gaps = 18/189 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T + ++    VV+A + + +    +  +  +        G + +G             
Sbjct: 31  GVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSR 90

Query: 74  R-----LEKKLEQYP--NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM 124
           +      +K   +YP    L++    + ++      +R     +L+A  D+    +    
Sbjct: 91  KVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKGPSLYQVD 150

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNHN 179
                      AIG   + A +      + +   ++    A+         ++   T  N
Sbjct: 151 PSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDDAVHTAILALKETFEGEL---TEDN 207

Query: 180 IVLETLKVG 188
           I +  +   
Sbjct: 208 IEIAVVSTK 216


>gi|50555329|ref|XP_505073.1| YALI0F06314p [Yarrowia lipolytica]
 gi|49650943|emb|CAG77880.1| YALI0F06314p [Yarrowia lipolytica]
          Length = 251

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 50/167 (29%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLL 72
             T L ++    +V+A + + S    V   +  K+  +    G + AG            
Sbjct: 32  GVTSLGIKASNGIVLATEKK-SASSLVNSDSHSKIELITPDIGMVYAGMGPDFRVLVDKA 90

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDW-------RMDKYLRNLEAMILIADKTITL---VIT 122
            ++ +   +        +  L ++             +R     +L+A         +  
Sbjct: 91  RKVAQTSYKRVYNEYPPTRMLVQEIAKIVQEATQSGGVRPYGVSLLVAGHDEHNGFTLYQ 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                        AIG G + A +      + +   E+    A+ IA
Sbjct: 151 VDPSGSYFPWKATAIGKGSTSAKTFLEKRWNEELELED----AIHIA 193


>gi|18313186|ref|NP_559853.1| proteasome subunit alpha [Pyrobaculum aerophilum str. IM2]
 gi|20532211|sp|Q8ZVM1|PSA_PYRAE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|18160700|gb|AAL64035.1| proteasome alpha subunit [Pyrobaculum aerophilum str. IM2]
          Length = 243

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 48/172 (27%), Gaps = 14/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
                + V+    VV+  + +  +      ++  K+  + +    +  G    +      
Sbjct: 34  RGWPTVGVKCKAGVVLTAEKR-KISALFDSSSLEKIYLIDEHVAASPSGLLADARILIDY 92

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITG 123
              +        ++      L ++   L + +      R     +LIA        +   
Sbjct: 93  ARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDRHGARLYQT 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
               +       AIG+                       E+A KA++ A +I
Sbjct: 153 DPSGVYIGYFATAIGAESGTITEFLEKNYKFDMEMGECIELALKALASAVEI 204


>gi|159109661|ref|XP_001705094.1| 20S proteasome alpha subunit 4 [Giardia lamblia ATCC 50803]
 gi|157433173|gb|EDO77420.1| 20S proteasome alpha subunit 4 [Giardia lamblia ATCC 50803]
          Length = 214

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 19/182 (10%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           ++ +   H AV+   T+ + VR    +V+A + + +  +      ++K+  +    IIA 
Sbjct: 18  LIQVEHAHKAVE-RGTSAVAVRSAAGIVLAIERKQTA-RLQDPRASQKIFDVDDH-IIAT 74

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSV--ELAKD---------WRMDKYLRNLEAM 109
           FAG +ADA  L++R   + + Y      +     +AK           R       +  +
Sbjct: 75  FAGLTADARVLIDRARLECQAYRMTYDVAPSVEIIAKAVASILQSHTHRGGTRPFGVSII 134

Query: 110 ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARK 164
           +   D   + V       +  E   +AIG+     +      +        N A  +A+ 
Sbjct: 135 LAGNDLNGSHVFMCDPSGVYTEWKALAIGNQCVTIIEFLEKKLKEGEPQNTNDALSLAKA 194

Query: 165 AM 166
           A+
Sbjct: 195 AL 196


>gi|209736890|gb|ACI69314.1| Proteasome subunit alpha type-7 [Salmo salar]
          Length = 198

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 19/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDDH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR-----------MDKYLRNLEAMILIADKT-ITLVI 121
           R   + + +   +                         +    + A+I+  D      + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDCDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAMS 167
                         AIG                   +T N A ++A K ++
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEESIATDNEAIKLAIKTLN 198


>gi|46254562|gb|AAS86254.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           mauritiana]
          Length = 251

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+         RK+  L K   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGTNCVVLGVEK-SSVSPMQEDRTVRKISMLDKHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
           R + + + +            + R   +L + +      R      L+          + 
Sbjct: 88  RGQMECQSHRLNFDNPVTPEYITRYIAQLKQKYTQCTGRRPFGISCLVGGIDADGSARLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                 +  E   +A G   +                    A ++A +A+
Sbjct: 148 HTEPSGIFYEYKAIATGRSANTVREFFEKAYRDHEVTTKCEAIKLATRAL 197


>gi|53148461|dbj|BAD52258.1| proteasome alpha 4 subunit [Plutella xylostella]
          Length = 257

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 63/191 (32%), Gaps = 17/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +     +++A + + +        ++ K+ +L    +    AG ++DA  L  
Sbjct: 30  HAGTSLGILATDGILLAAERRNTNKLLDEVFSSEKIYKLNDDMV-CSVAGITSDANVLTN 88

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q   S            + + +      R     IL           + 
Sbjct: 89  ELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS----AEEIARKAMSIAADICVYTN 177
                          IG+  + A+S+ +       +    A+ +A K +S   D+   T 
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQALAIKVLSKTLDMTKLTP 208

Query: 178 HNIVLETLKVG 188
             + + TL   
Sbjct: 209 EKVEMATLTRQ 219


>gi|189054923|dbj|BAG37907.1| unnamed protein product [Homo sapiens]
          Length = 261

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEAFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|325186732|emb|CCA21279.1| proteasome subunit alpha type3 putative [Albugo laibachii Nc14]
 gi|325187111|emb|CCA21652.1| proteasome subunit alpha type3 putative [Albugo laibachii Nc14]
          Length = 255

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 56/172 (32%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + ++    V+I  + ++     V     R++  +     ++  AG  AD   L+ 
Sbjct: 33  NSGTTIGIKCSDGVIIGVEKKLVSKMLVP-GTHRRIFAVDHHVGVS-MAGLVADGRQLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIA----DKTITLV 120
           R  ++   Y               RM ++         +R   A I++A    D+    +
Sbjct: 91  RAREEALNYKKNYGSPIPPHVLADRMGQFIHYYTLYGSVRPFGATIMVAGYDQDENQHKL 150

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                  +       A+G G   A +                R+A+   A I
Sbjct: 151 YQVEPSGVTFSFRGCAMGKGEQAAKTEIEKYKLFDLP----CREAIKYVAKI 198


>gi|196011874|ref|XP_002115800.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190581576|gb|EDV21652.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 228

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +       RK+  L    +   FAG +ADA  L+ 
Sbjct: 31  RGSTAVGVRGKDIVVLGIEKK-SVAKLQDSRTMRKICSLDDH-VFMAFAGLNADARILVN 88

Query: 74  RLEKKLEQYPNQLLRSSV---------ELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R   + + +   +               L + +      R      LIA         + 
Sbjct: 89  RARIECQSHKLTVEDPVTLEYITRYIAGLKQRYTQSNGRRPFGISTLIAGFDYDRTPHLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
                    E     IG              +     +  S   +  +A+
Sbjct: 149 QTDPSGTYHEWKANVIGRSAKTVREFLEKNYNSEAIESDQSTIRLTVRAL 198


>gi|302697359|ref|XP_003038358.1| hypothetical protein SCHCODRAFT_49745 [Schizophyllum commune H4-8]
 gi|300112055|gb|EFJ03456.1| hypothetical protein SCHCODRAFT_49745 [Schizophyllum commune H4-8]
          Length = 234

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 19/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V+    VVIA + +V     +  ++  K+  + +    A  +G +ADA T+++ 
Sbjct: 26  GSTTVGVKTPEGVVIAVEKRV-QSPLLEASSIEKIMEIDRHLGCA-VSGLTADARTMVDH 83

Query: 75  LEKKLEQY-----PNQLLRSSVELAKDWRM----------DKYLRNLEAMILIA--DKTI 117
                + +         + S  +   D  +              R     +LIA  D+  
Sbjct: 84  ARVTAQNHAFVYDERIKVESCTQAVCDLALRFGESVHDEEAMMSRPFGVALLIAGIDELG 143

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A S  +     Q + +E
Sbjct: 144 PQLFHTDPSGTFVRYDAKAIGSGSEAAQSELQDKWHKQMTLQE 186


>gi|332658101|gb|AEE83501.1| proteasome subunit beta type-2-B [Arabidopsis thaliana]
          Length = 215

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 49/177 (27%), Gaps = 29/177 (16%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +  +  +G  ++A D        + K    K+  L    ++A  +G   D     E ++K
Sbjct: 4   VFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAA-SGEPGDRVQFTEYVQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMD------------------------KYLRNLEAMILIA 113
            +  Y  +        A                                  ++  ++   
Sbjct: 63  NVSLYQFRNGIPLSTAAAANFTRGELATALRKEFCATFQGYSDFCVLMNPYSVNILMAGY 122

Query: 114 DKTITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
           DK     +          +    A G G  ++LS       +  S   A E+  K +
Sbjct: 123 DKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCI 179


>gi|308160134|gb|EFO62638.1| 20S proteasome alpha subunit 4 [Giardia lamblia P15]
          Length = 214

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 19/182 (10%)

Query: 1   MVVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
           ++ +   H AV+   T+ + VR    +V+A + + +  +      ++K+  +    IIA 
Sbjct: 18  LIQVEHAHKAVE-RGTSAVAVRSAAGIVLAIERKQTA-RLQDPRASQKIFDVDDH-IIAT 74

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW-----------RMDKYLRNLEAM 109
           FAG +ADA  L++R   + + Y      +                   R       +  +
Sbjct: 75  FAGLTADARVLIDRARLECQAYRMTYDVAPSVEVIAKAVASILQSHTHRGGTRPFGVSII 134

Query: 110 ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARK 164
           +   D   + V       +  E   +AIG+     +      +        N A  +A+ 
Sbjct: 135 LAGNDLNGSHVFMCDPSGVYTEWKALAIGNQCVTIIEFLEKKLKEGEPQNTNDALSLAKA 194

Query: 165 AM 166
           A+
Sbjct: 195 AL 196


>gi|168024960|ref|XP_001765003.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683812|gb|EDQ70219.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 250

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 60/167 (35%), Gaps = 16/167 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    VV+  +  +S    +  +N R++  + +   +A  AG ++D   ++ 
Sbjct: 33  NSGTVVGIKCKDGVVLGVEKLISSKMLLEGSN-RRIHAVDRHAGMA-MAGLASDGRQIVT 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTITLVIT 122
           +   +   Y +             R+  Y+               A++   D+    +  
Sbjct: 91  KARSEASSYRSFYGEEVPIGELCERVAHYVHLCTLYWWLRPFGSSAILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                +       A+G G   A +    L  ++ +  +     ++IA
Sbjct: 151 IEPSGVAYRYFGAAVGKGRQAAKTEIEKLNLSEMTCRQGV---IAIA 194


>gi|320588907|gb|EFX01375.1| proteasome component pup2 [Grosmannia clavigera kw1407]
          Length = 253

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 30/181 (16%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATAEGVILGVEKRVTS-TLMEVSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDW---------------RMDKYLRNLEAMILIADKTI-- 117
              + + +           +                        R     +LIA      
Sbjct: 92  ARVECQSHAFNYAEPLSVESCTQAICDLALRFGESADGEDSIMSRPFGVALLIAGYDSDI 151

Query: 118 --------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
                     +               AIGSG   A +  +           AE +  K +
Sbjct: 152 GPDGKEGGPALYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTLADAETLVLKTL 211

Query: 167 S 167
            
Sbjct: 212 K 212


>gi|302501488|ref|XP_003012736.1| hypothetical protein ARB_00987 [Arthroderma benhamiae CBS 112371]
 gi|291176296|gb|EFE32096.1| hypothetical protein ARB_00987 [Arthroderma benhamiae CBS 112371]
          Length = 238

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 47/171 (27%), Gaps = 36/171 (21%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ V+    VVIA D                         + GF G  +D   +   
Sbjct: 40  GTSVIAVKFKDGVVIASDN------------------------LVGFGGDVSDMQYIDRV 75

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIA--------DKTITLVIT 122
           L     Q            AK+         Y R  +   L          D+    + +
Sbjct: 76  LNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGLDDEGKPFLSS 135

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                       +A G G   A+   R L   +N  + I ++    A   C
Sbjct: 136 ADLLGTTYSAPALATGFGAHLAVPILRRLFPEENGIDNITKEQAVDAMKQC 186


>gi|198475053|ref|XP_002132830.1| GA26039 [Drosophila pseudoobscura pseudoobscura]
 gi|198138657|gb|EDY70232.1| GA26039 [Drosophila pseudoobscura pseudoobscura]
          Length = 246

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 17/175 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ +R D  V++A D  V  G T    N  +V ++ +  ++ G  G  AD       
Sbjct: 35  GGSVIGIRYDQGVLVAADNCVHFGSTPRFQNVDRVFKINEQIVMGG-GGDFADIQMYKRT 93

Query: 75  LEKKL---EQYPNQLLRSSVELAKDWRMDKYLRN----LEAMILIADKTI----TLVITG 123
           ++ ++     Y +        LA  +R   Y R       A+ ++           +   
Sbjct: 94  IDAQVVTDRIYQDTTEMKPKTLAGWFRSTTYTRRSSNDFSAVAVVVGGMEPQAGPYLAYI 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADIC 173
               L  E+ V    +     L   R         T+  A  + R+ M    +  
Sbjct: 154 DSRGLIVEDYVATTDTAQQMVLPMVRDSKPKDREFTEEEALAMIRQGMETLNNRD 208


>gi|125959415|sp|Q5RDH8|PSA7_PONAB RecName: Full=Proteasome subunit alpha type-7
          Length = 248

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +  S         +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|225714226|gb|ACO12959.1| Proteasome subunit alpha type-4 [Lepeophtheirus salmonis]
 gi|290561435|gb|ADD38118.1| Proteasome subunit alpha type-4 [Lepeophtheirus salmonis]
          Length = 253

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 15/192 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T+L +     +V+A + + +        ++ K+  L +      AG    +      
Sbjct: 30  HAGTVLGILATDGIVVAAERKNTNKLLDDVFHSEKIYSLNENMGCSVAGITSDANVLTHE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           +  + K+ E          QL+    +  + +      R     IL           +  
Sbjct: 90  MRLIGKRYEYVYGSPIPCEQLVSQVCDKKQAYTQFGGKRPFGVSILYIGWDEHFGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +          N   ++A K ++   D+   T  
Sbjct: 150 SDPSGNYGGWKATCIGNNSTAAVSQLKQEYKENEMNLNECLDLAIKVLTKTLDMTKLTPD 209

Query: 179 NIVLETLKVGDE 190
            I + TL   ++
Sbjct: 210 KIEIATLSRKND 221


>gi|154335736|ref|XP_001564104.1| proteasome alpha 7 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061138|emb|CAM38160.1| putative proteasome alpha 7 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 308

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 16/185 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     VV+A + + S  +       RK+ ++     +A FAG SADA  L+ + + +
Sbjct: 94  VGVLGRDCVVMAVEKK-SAVKLQDSRTIRKIYKVDAHIYLA-FAGLSADARVLINKAQLE 151

Query: 79  LEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMGD 126
            +++            L+R    + +        R      +I          +      
Sbjct: 152 CQRFSLNYEDTMDVDMLVRYVAGVQQKSTQSGGSRPFGVATVIGGFNEDGTPHLWKTDPS 211

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-NIVLETL 185
            +      +AIG      +             +E    A+    ++ V +   NI L  L
Sbjct: 212 GMSSAWRAVAIGRHDQTVIEYMEKNYKDGMLRDECVHFAIKSLLEV-VESGSRNIELLVL 270

Query: 186 KVGDE 190
           +  DE
Sbjct: 271 QHRDE 275


>gi|260945467|ref|XP_002617031.1| proteasome component PUP2 [Clavispora lusitaniae ATCC 42720]
 gi|238848885|gb|EEQ38349.1| proteasome component PUP2 [Clavispora lusitaniae ATCC 42720]
          Length = 252

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 17/162 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     VV+  + +V+    +  ++  K+  + +    A  G    +       
Sbjct: 34  GSTAIGISTAEGVVLGVEKRVTS-PLLESSSIEKIVEIDRHIGCAMSGLTADARSMIDHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTIT 118
                  + Y ++      L +S  +LA         + R+      +  +I   D+   
Sbjct: 93  RVSSLTHDLYYDEQIQVESLTQSVCDLALRFGEGASGEKRLMSRPFGVALLIAGIDEKGP 152

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
            +               AIGSG   A +  +       + +E
Sbjct: 153 QLYHAEPSGTFYRYDAKAIGSGSEGAQTELQNEYHKSLTLKE 194


>gi|225712516|gb|ACO12104.1| Proteasome subunit alpha type-4 [Lepeophtheirus salmonis]
          Length = 253

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 15/192 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T+L +     +V+A + + +        ++ K+  L +      AG    +      
Sbjct: 30  HAGTVLGILATDGIVVAAERKNTNKLLDDVFHSEKIYSLNENVGCSVAGITSDANVLTHE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           +  + K+ E          QL+    +  + +      R     IL           +  
Sbjct: 90  MRLIGKRYEYVYGSPIPCEQLVSQVCDKKQAYTQFGGKRPFGVSILYIGWDEHFGYQLYR 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +          N   ++A K ++   D+   T  
Sbjct: 150 SDPSGNYGGWKATCIGNNSTAAVSQLKQEYKENEMNLNECLDLAIKVLTKTLDMTKLTPD 209

Query: 179 NIVLETLKVGDE 190
            I + TL   ++
Sbjct: 210 KIEIATLSRKND 221


>gi|195148721|ref|XP_002015316.1| GL19635 [Drosophila persimilis]
 gi|194107269|gb|EDW29312.1| GL19635 [Drosophila persimilis]
          Length = 246

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 17/175 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ +R D  V++A D  V  G T    N  +V ++ +  ++ G  G  AD       
Sbjct: 35  GGSVIGIRYDQGVLVAADNCVHFGSTPRFQNVDRVFKINEQIVMGG-GGDFADIQMYKRT 93

Query: 75  LEKKL---EQYPNQLLRSSVELAKDWRMDKYLRN----LEAMILIADKTI----TLVITG 123
           ++ ++     Y +        LA  +R   Y R       A+ ++           +   
Sbjct: 94  IDAQVVTDRIYQDTTEMKPKTLAGWFRSTTYTRRSSNDFSAVAVVVGGMEPQAGPYLAYI 153

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADIC 173
               L  E+ V    +     L   R         T+  A  + R+ M    +  
Sbjct: 154 DSRGLIVEDYVATTDTAQQMVLPMVRDSKPKDREFTEEEALAMIRQGMETLNNRD 208


>gi|297702407|ref|XP_002828172.1| PREDICTED: proteasome subunit alpha type-7-like isoform 1 [Pongo
           abelii]
          Length = 250

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                         AIG              +         A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKAL 197


>gi|149034052|gb|EDL88835.1| rCG38543, isoform CRA_b [Rattus norvegicus]
          Length = 236

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 195


>gi|4092058|gb|AAC99402.1| proteasome subunit HSPC [Homo sapiens]
          Length = 248

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         +IG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANSIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|326926468|ref|XP_003209422.1| PREDICTED: aminoglycoside phosphotransferase domain-containing
           protein 1-like [Meleagris gallopavo]
          Length = 635

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ RL +      AG    +      
Sbjct: 404 HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYRLNEDMACSVAGITSDANVLTNE 463

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 464 LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 523

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           +A  +A K ++   D+   +  
Sbjct: 524 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAE 583

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 584 KVEIATLTREN 594


>gi|255647220|gb|ACU24078.1| unknown [Glycine max]
          Length = 249

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 56/166 (33%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    VV+  +  +     +  +N R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVIGIKCKDGVVLGVEKLIPSKMMLPGSN-RRIHSVHRHSGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY-----------LRNLEAMILIADKTITLVIT 122
           R + +   Y +             R+  Y           L     ++   D+    +  
Sbjct: 91  RAKSEATNYDSVYGEPIPVKELADRVASYVHLCTLYWWLRLFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L     +  +   +   I
Sbjct: 151 VEPSGVSYRYFGAAIGKGRQAAKTEIEKLKLADMTCRQGVIEGAKI 196


>gi|156552814|ref|XP_001600177.1| PREDICTED: similar to proteasome alpha 4 subunit [Nasonia
           vitripennis]
          Length = 257

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 64/192 (33%), Gaps = 17/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  +++A + + +         + K+ +L +  ++   AG ++DA  L  
Sbjct: 30  HAGTCLGILANDGILLAAEKRNTNKLLDEVFFSEKIYKLNED-VVCSVAGITSDANVLTN 88

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q   +            + + +      R     IL           + 
Sbjct: 89  ELRLIGQRYLLQYGETIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDRHYGYQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTN 177
                          IG+  + A+S+ +            A  +A K MS   D+   + 
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKEGEMTLKDAMALAIKVMSKTLDMNKLSA 208

Query: 178 HNIVLETLKVGD 189
             + + TL   D
Sbjct: 209 DKVEMATLTRAD 220


>gi|170090832|ref|XP_001876638.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164648131|gb|EDR12374.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 255

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 14/164 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT L ++    +VIA + + S    +  +   KV  +     I  ++G   D   L+ +
Sbjct: 35  GTTSLGIKASNGIVIATEKKTSS-ILIDDSVIDKVAVICPNIGIV-YSGMGPDFRVLITK 92

Query: 75  LEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             K  + Y            L +    + +       +R     +L+A         +  
Sbjct: 93  ARKSAQAYWKIYGEYPPTRVLTQEIATVMQKATQSGGVRPYGVSLLVAGWDSHRGPTLYQ 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A +      +   S E+    A+
Sbjct: 153 VDPSGSYWAWKASAIGKNMLNAKTFLEKRYNDDISLEDAIHTAL 196


>gi|197097428|ref|NP_001125062.1| proteasome subunit alpha type-7 [Pongo abelii]
 gi|55726839|emb|CAH90179.1| hypothetical protein [Pongo abelii]
          Length = 250

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +  S         +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 195


>gi|77999279|gb|ABB16986.1| unknown [Solanum tuberosum]
          Length = 193

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 61/162 (37%), Gaps = 13/162 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D+  L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQTLTPNIGVV-YSGMGPDSRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYYRLYKESIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKA 165
                       A+G   S A +      + +   ++    A
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEELELDDAVHTA 191


>gi|258597933|ref|XP_001348850.2| 20S proteasome beta 4 subunit, putative [Plasmodium falciparum 3D7]
 gi|255528933|gb|AAN37289.2| 20S proteasome beta 4 subunit, putative [Plasmodium falciparum 3D7]
          Length = 195

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 45/154 (29%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTLLERL 75
           T++ +R +  VV+A D   S+   +   N    +     GN      GS  D     E +
Sbjct: 3   TLIGLRGNNFVVLAADT-YSINSIIKLKNDDNTKFYDIHGNKCLLLGGSIGDRLQFGEFI 61

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYL-RNLEAMILIADKTITLVITGMGDVLEPENGV 134
            K +  Y  Q        +  +   K L   L       +  I       G  L   + +
Sbjct: 62  RKNVHLYQYQNNTDMFVKSFAFFTRKNLAYYLRRNPFEVNCLIAGYDKKDGYQLYWCDYL 121

Query: 135 M--------AIGSGGSYALSAARALMSTQNSAEE 160
                    A G G     +          + +E
Sbjct: 122 SNMDSVNKGAHGYGAYLVSAILDKYYHENLTVDE 155


>gi|14594925|emb|CAC43323.1| putative alpha7 proteasome subunit [Nicotiana tabacum]
          Length = 249

 Score = 49.2 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 60/166 (36%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  +   + ++  + R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVLGVEKLI-ASKMMLPGSNRRIHSVHRHSGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +      +      R+  Y+                ++   D+    +  
Sbjct: 91  RTKSEATNYESTYGEPILVKELAERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L  ++ +  +   +   I
Sbjct: 151 VEPSGVSYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKI 196


>gi|209875677|ref|XP_002139281.1| proteasome subunit alpha type 5 [Cryptosporidium muris RN66]
 gi|209554887|gb|EEA04932.1| proteasome subunit alpha type 5, putative [Cryptosporidium muris
           RN66]
          Length = 255

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 60/165 (36%), Gaps = 21/165 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++ +  VV+A + +++    +  ++  K+  +    +    +G  ADA T+++ 
Sbjct: 34  GSTAVGIKTEEGVVLASERRITS-TLLEPSSVEKIMDIDTH-VGCCMSGLVADAKTMIDH 91

Query: 75  LEKKLEQYPNQ---------LLRSSVELAKDWRMDK-------YLRNLEAMILIADKTIT 118
              + + Y            ++++  +LA D+   K         R     ++IA     
Sbjct: 92  ARVEAQNYFFTYDEQMPVESVVQTISDLALDFSDIKEKGKKKTMSRPFGVALIIAGADKD 151

Query: 119 L---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
               +          +    +IG+    A S       +  + +E
Sbjct: 152 GKSTLWVTDPSGTYTQFTAASIGTAQEGAESMLIEQYHSNMTLKE 196


>gi|308799916|ref|XP_003074739.1| Pac1 Proteasome subunit alpha type 4 (IC) [Ostreococcus tauri]
 gi|119358782|emb|CAL51997.2| Pac1 Proteasome subunit alpha type 4 (IC) [Ostreococcus tauri]
          Length = 228

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 57/190 (30%), Gaps = 14/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T + +R +  V++A + +         +   K+ ++ K  +I  AG    +      
Sbjct: 27  HAGTCVGLRTNTGVLLASEKKTMSKLLEQSSTPEKLWKIDKHIVIAVAGLNADAMILVNF 86

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
              +  + +           L++   +  + +     LR      L A         +  
Sbjct: 87  ARLVAGQYKARYGLPIPVENLVQELGDHMQGYTQFGGLRPYGVAFLFAGWDRQGGFQLYQ 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHN 179
                        AIG+    A S  +   S       A+ I  K +    D    T   
Sbjct: 147 SEPSGNFSAWKAAAIGASHQAARSILKTEYSEGLDISEAKGIVSKVLQKTMDCMSLTEDK 206

Query: 180 IVLETLKVGD 189
           + +  L   +
Sbjct: 207 VEMVYLSYNE 216


>gi|302348939|ref|YP_003816577.1| Proteasome subunit alpha [Acidilobus saccharovorans 345-15]
 gi|302329351|gb|ADL19546.1| Proteasome subunit alpha [Acidilobus saccharovorans 345-15]
          Length = 257

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 52/168 (30%), Gaps = 15/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFT 70
              T L V  D  V++A + + ++    +      K+ ++     +  AG          
Sbjct: 35  KGWTSLGVLTDSGVILAAEKRKIT--PLLDLNGIEKIYKVDDHIGVTFAGMGSDGRVLID 92

Query: 71  LLERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVI 121
               +  +      +      +++S  +L + +     +R     ++           + 
Sbjct: 93  YARLVAVRHRLTYGEAPSTEYVVKSVADLKQLYTQHGGVRPFGVALVFGGVDSDGTPRLF 152

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                        +AIG GG  A S          S ++  + A+ IA
Sbjct: 153 RTEPGGQYFSYYAIAIGLGGDAANSYLEKNYKKDLSLDDAIKLAI-IA 199


>gi|294896444|ref|XP_002775560.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|239881783|gb|EER07376.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
          Length = 269

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 29/180 (16%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +V     +  ++  K+ ++    +    +G +ADA TL++ 
Sbjct: 35  GSTAIGITTKEGVVLAVEKRVGS-PLIEPSSIEKLMQIAPH-VGCAMSGLTADARTLVDH 92

Query: 75  LEKKLEQYPNQLLRSS---------VELAKDWRMDK------------YLRNLEAMILIA 113
              +   +                  ++A D+                  R     +L+A
Sbjct: 93  ARVEALNHDFTYNEPMQVESIVHSISDMALDFSRSDDKKKKGDKKKKTMSRPFGVALLVA 152

Query: 114 DKTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
                    +          +    AIGS    A S          S   AE++A   + 
Sbjct: 153 GVDSDNGPQLFMADPSGSYTKYRAAAIGSAAEGATSLLLEQFKESMSLKEAEDLALVVLR 212


>gi|198450366|ref|XP_002137083.1| GA26779 [Drosophila pseudoobscura pseudoobscura]
 gi|198131005|gb|EDY67641.1| GA26779 [Drosophila pseudoobscura pseudoobscura]
          Length = 208

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 15/170 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V+I+ D  V  G  V+     K+ RLG   +IA  AG+  D    +  + 
Sbjct: 3   TILAIKGKDFVLISADTVVGKGLLVLGQGKSKIERLGDFAVIAA-AGNGGDPQRFMSFIA 61

Query: 77  KKLEQYPNQLL------RSSVELAKDWRMD----KYLRNLEAMILIAD-KTITLVITGMG 125
           + +  +  Q        RS    A               + A+I   D +    +     
Sbjct: 62  RHMALHRVQHNGQSPSVRSMAHFAGKQIYSSVNANLNFKVSALIAGWDPRGGPQLHQIDE 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
                       G G     S  +   S       A  + +K ++   + 
Sbjct: 122 FGGLVSVPYSGQGLGLPVFNSIFQKDYSPDIDEPTAYHVLKKCVAAVHER 171


>gi|146186046|ref|XP_001032923.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|146143090|gb|EAR85260.2| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 244

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 45/156 (28%), Gaps = 14/156 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL VR    V++  + ++     V  ++ R         +I G  G   D   ++ R  
Sbjct: 30  TILGVRCKDGVILGAEKKLQTKLMVEDSDRRIYNIQKNIGMIVG--GRIPDGRNVVHRAR 87

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM-----------G 125
           K+ ++Y               R  +YL              +++I+              
Sbjct: 88  KEAQEYEKYFSMPISGRILSERTGQYLHAHTLYGAYRPFGCSVIISSYDPIDGLQLHQSD 147

Query: 126 DVLEPENGVMAI-GSGGSYALSAARALMSTQNSAEE 160
           +            G G    ++          + EE
Sbjct: 148 NAGYCLGYYACAQGQGKQEVMAHFGRRNFRDLTCEE 183


>gi|297794401|ref|XP_002865085.1| hypothetical protein ARALYDRAFT_920118 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310920|gb|EFH41344.1| hypothetical protein ARALYDRAFT_920118 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 250

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+A + + +        +ARK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNATVGVRGTDTVVLAVEKKSTPKLQ-DSRSARKIVSLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   L               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESSGQETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   +
Sbjct: 203 KNIEVAVMTREE 214


>gi|119619571|gb|EAW99165.1| proteasome (prosome, macropain) subunit, alpha type, 4, isoform
           CRA_b [Homo sapiens]
          Length = 225

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 6   HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 65

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 66  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 125

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 126 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 185

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 186 KVEIATLTREN 196


>gi|194854891|ref|XP_001968442.1| GG24870 [Drosophila erecta]
 gi|190660309|gb|EDV57501.1| GG24870 [Drosophila erecta]
          Length = 210

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 11/151 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V++A D   +     MK +  K+ RL   N++A   G   D     + + 
Sbjct: 5   TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMAT-VGDGGDTIQFTDYIS 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIA--DKTITLVITGMGD 126
           K L  Y           +      K L        R   AM+L          +      
Sbjct: 64  KNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDGVEGPDLHYIDSY 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS 157
                      G G  +  S  +   +++ +
Sbjct: 124 GAAQPINHAGHGWGSMFCGSILQRYWNSRLT 154


>gi|34783332|gb|AAH22817.2| PSMA4 protein [Homo sapiens]
          Length = 260

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 29  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 88

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 89  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 149 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 208

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 209 KVEIATLTREN 219


>gi|195470823|ref|XP_002087706.1| GE18168 [Drosophila yakuba]
 gi|194173807|gb|EDW87418.1| GE18168 [Drosophila yakuba]
          Length = 210

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 47/151 (31%), Gaps = 11/151 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V++A D   +     MK +  K+ RL   NI+A   G   D     + + 
Sbjct: 5   TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNIMAT-VGDGGDTIQFTDFIS 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADK--TITLVITGMGD 126
           K L  Y           +      K L        R   AM+L          +      
Sbjct: 64  KNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSY 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS 157
                      G G  +  S  +   +++ S
Sbjct: 124 GAAQSINHAGHGWGSMFCGSILQRYWNSRLS 154


>gi|159112684|ref|XP_001706570.1| Proteasome subunit beta type 2 [Giardia lamblia ATCC 50803]
 gi|157434668|gb|EDO78896.1| Proteasome subunit beta type 2 [Giardia lamblia ATCC 50803]
          Length = 209

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 42/160 (26%), Gaps = 10/160 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA-----GFAGSSADAFTL 71
           ++   +    V +  D        V+K  A +  ++ +G  +      G      D    
Sbjct: 3   SVFGFKGKDFVCLVADTVFKHSILVLKECADRTVKIHEGQGMIVTGEDGDVLQFTDYIKH 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLE 129
             +L    + Y   +  S+  +  +             ++    D     +         
Sbjct: 63  SLKLRSLRQGYTPTVKSSANFIRTELARAIREGPYNVYVITGGVDAAGPQLYYMDYLGTM 122

Query: 130 PENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
            E+     G    + LS              A ++ +  +
Sbjct: 123 GEDNFCVQGYSMYFLLSVMSEYWKPDMTKQDALDLIKHCI 162


>gi|146302859|ref|YP_001190175.1| proteasome subunit alpha [Metallosphaera sedula DSM 5348]
 gi|172046887|sp|A4YCU9|PSA_METS5 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
 gi|145701109|gb|ABP94251.1| Proteasome endopeptidase complex [Metallosphaera sedula DSM 5348]
          Length = 240

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T L V+    VVI G+ +    Q +   +  KV  L    +   FAG ++D   L++
Sbjct: 35  KGWTTLGVKTKNAVVILGEKK-KASQLLDVDSIEKVFLLDDH-VGCSFAGLASDGRILID 92

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
                  Q+          + L +   ++ + +     +R     +++   D+ +T +  
Sbjct: 93  YARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVDRGVTKLFM 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
                       +AIG GG  A            S EE   +A  A+ +
Sbjct: 153 TEPSGQFMPYQAVAIGQGGYNATDYLEKNYKEDLSVEETILLALNALKV 201


>gi|114658366|ref|XP_001150495.1| PREDICTED: proteasome alpha 4 subunit isoform 7 [Pan troglodytes]
 gi|114658368|ref|XP_001150554.1| PREDICTED: proteasome alpha 4 subunit isoform 8 [Pan troglodytes]
 gi|114658370|ref|XP_001150614.1| PREDICTED: proteasome alpha 4 subunit isoform 9 [Pan troglodytes]
 gi|33604016|gb|AAH56249.1| PSMA4 protein [Homo sapiens]
          Length = 237

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 6   HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 65

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 66  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 125

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 126 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 185

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 186 KVEIATLTREN 196


>gi|212534950|ref|XP_002147631.1| proteasome component Pre6, putative [Penicillium marneffei ATCC
           18224]
 gi|210070030|gb|EEA24120.1| proteasome component Pre6, putative [Penicillium marneffei ATCC
           18224]
          Length = 271

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 49/169 (28%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  +     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKIGLIDTHVCLA-FAGLNADARILID 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +               +
Sbjct: 89  KARLEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDKGDGTPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKDDMDREATLQLTIKSL 197


>gi|242214840|ref|XP_002473240.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727673|gb|EED81585.1| predicted protein [Postia placenta Mad-698-R]
          Length = 239

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 22/175 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVR-------RLGKGNIIAGFAGSSA 66
           HA ++L V     VV+A + +V+     +                L   N+I+G AG +A
Sbjct: 6   HAGSVLGVLAKDGVVLAAEKKVTGKLLDLSGAREGGYGGSGEKIFLLNSNVISGVAGITA 65

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM---------DKYLRNLEAMILIADKTI 117
           DA +L+       +++               R+            LR     +L A    
Sbjct: 66  DANSLVNYARAAAQRHLFVYNEDIPVELLAQRLCDLKQGYTQYGGLRPFGVSLLYAGYDP 125

Query: 118 TL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                +                IG+    A S  +         EE   +  + M
Sbjct: 126 HYQFQLYQSDPSGNYSGWKATCIGANNGTAQSLLKQEYKEDIGVEEAIGLVLRVM 180


>gi|167034419|ref|YP_001669650.1| 20S proteasome A and subunit Bs [Pseudomonas putida GB-1]
 gi|166860907|gb|ABY99314.1| 20S proteasome A and B subunits [Pseudomonas putida GB-1]
          Length = 143

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 31/171 (18%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI        V IA D + +   +++  + +K+  +   +     +G+  D   L+   
Sbjct: 2   TTI---AYKDGV-IAYDSRQTRSGSIVSDDCQKLTVVDGVSFF--LSGAVCDEKALIAA- 54

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
                 Y        VE         Y+ +   + ++     T +     D   P+    
Sbjct: 55  ------YFGTPSPVPVE------CSGYVVDGGRLQMVGHDDKTGIWRQELDPANPD---- 98

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLK 186
           AIGSG  YAL+A         SAEE  R AM       +YT   +   T+K
Sbjct: 99  AIGSGSPYALAAMDMGA----SAEEAVRAAMK----RDIYTGGKVRTVTIK 141


>gi|297816388|ref|XP_002876077.1| multicatalytic endopeptidase [Arabidopsis lyrata subsp. lyrata]
 gi|297321915|gb|EFH52336.1| multicatalytic endopeptidase [Arabidopsis lyrata subsp. lyrata]
          Length = 251

 Score = 48.8 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 56/193 (29%), Gaps = 22/193 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+A + + +        +ARK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLAVEKKSTPKLQ-DSRSARKIVSLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   L               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESSGQETVKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGDE 190
            NI +  +   +E
Sbjct: 203 KNIEVAVMTREEE 215


>gi|8394069|ref|NP_058977.1| proteasome subunit alpha type-4 [Rattus norvegicus]
 gi|130862|sp|P21670|PSA4_RAT RecName: Full=Proteasome subunit alpha type-4; AltName:
           Full=Macropain subunit C9; AltName: Full=Multicatalytic
           endopeptidase complex subunit C9; AltName:
           Full=Proteasome component C9; AltName: Full=Proteasome
           subunit L
 gi|56641|emb|CAA39458.1| multicatalytic proteinase subunit L [Rattus rattus]
 gi|57000|emb|CAA37390.1| unnamed protein product [Rattus norvegicus]
 gi|149041716|gb|EDL95557.1| proteasome (prosome, macropain) subunit, alpha type 4, isoform
           CRA_a [Rattus norvegicus]
          Length = 261

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|148678310|gb|EDL10257.1| proteosome (prosome, macropain) subunit, beta type 9 (large
           multifunctional peptidase 2), isoform CRA_a [Mus
           musculus]
          Length = 159

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 6/133 (4%)

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTI 117
                S    TLL  +  +LE     L+ ++  + K     KY  +L A +++A  D+  
Sbjct: 9   TRVRLSRVLLTLLPDIRFRLELEEPPLVLAAANVVK-NISYKYREDLLAHLIVAGWDQRE 67

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICV 174
              + G    +         GSG SY      A      + EE  R    A+++A +   
Sbjct: 68  GGQVYGTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDG 127

Query: 175 YTNHNIVLETLKV 187
            +   I L T+  
Sbjct: 128 SSGGVIYLVTITA 140


>gi|328848438|gb|EGF97654.1| hypothetical protein MELLADRAFT_41199 [Melampsora larici-populina
           98AG31]
          Length = 251

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    VV+A +  V     V  +N +++  +     IA  AG  AD   L  
Sbjct: 33  NSGTVIGLKVKDGVVLAVEKLVQSKLLVPGSN-KRLGTVDLHIGIAT-AGLLADGRQLAH 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY------LRNLEAMILIA------DKTITLVI 121
           R   +   Y      S        R+ ++        ++    + A            + 
Sbjct: 91  RARSEASAYKQNYNASIPMKRLADRLGQFCQAYTLYGSVRPFGVSALVGGLDSDGSPSLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG G + A +    L   + +  E   +A  I
Sbjct: 151 CLEPSGVYWGYRGCAIGKGRTLARTEIEKLKLEEMTVREAVDEAARI 197


>gi|119872356|ref|YP_930363.1| proteasome subunit alpha [Pyrobaculum islandicum DSM 4184]
 gi|119673764|gb|ABL88020.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
          Length = 251

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 49/172 (28%), Gaps = 14/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
                + V+  G VV+  + +  +      ++  K+  + +      +G    +      
Sbjct: 44  RGWPTVGVKCRGGVVLVAEKR-KISALFDPSSLEKIYLIDEHVAASPSGLLADARILIDY 102

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITG 123
              +        ++      L ++   L + +      R     +LIA        +   
Sbjct: 103 ARDVALSHRFIYDEPIDVELLTKAICNLKQQYTQFGGARPFGVALLIAGVDRHGARLFQT 162

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADI 172
               +       AIGS                       E+A KA++ A +I
Sbjct: 163 DPSGVYIGYFATAIGSDAGTISEYLEKNYKFDIDIRECIELAAKALASAVEI 214


>gi|38649313|gb|AAH63170.1| Proteasome (prosome, macropain) subunit, alpha type 4 [Rattus
           norvegicus]
          Length = 261

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWEATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|145542682|ref|XP_001457028.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424842|emb|CAK89631.1| unnamed protein product [Paramecium tetraurelia]
          Length = 233

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 55/193 (28%), Gaps = 26/193 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG--KGNIIAGFAGSSADAFTL 71
                + VR   V+V+  + + +        N + ++++     N+   F+G +ADA  L
Sbjct: 28  RGLCCVGVRGKDVIVLGVEKKATSKL----QNVKTIKKVYQLDNNLCMTFSGLNADARIL 83

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------EAMILIA------DKTITL 119
             +   + +QY                  +  +            +        ++    
Sbjct: 84  ANQTRLQCQQYKIYYEDDPSVDYIAKFTSQQQQKFTQRGGARPYGISTLIAGFDNQNKPK 143

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT 176
           +          E    ++G                    ++   +  KA+    +    +
Sbjct: 144 LFQTDPSGACSEWKATSLGKSAKQVKDFLEKHWREGLHEKDALLLTTKALMDVVE----S 199

Query: 177 NH-NIVLETLKVG 188
            + NI L  ++  
Sbjct: 200 GNKNIELCVIRKN 212


>gi|308321466|gb|ADO27884.1| proteasome subunit alpha type-3 [Ictalurus furcatus]
          Length = 255

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 41/165 (24%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRIFNIDRHVGMAVAGLLADARSLAEVS 92

Query: 73  ERLEKKLEQYPNQL--------LRSSVELAKDWRMDKYLRNLEAMILIADKTI-TLVITG 123
                                   +    A              ++   D+     +   
Sbjct: 93  REEASNFRSNYGHDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFILGSYDEDDGPQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L   + +  E+ ++   I
Sbjct: 153 DPSGISYGYWGCAIGKAKQAAKTEIEKLQMKEMTCRELVKEVAKI 197


>gi|47550827|ref|NP_999862.1| proteasome subunit alpha type-4 [Danio rerio]
 gi|28279709|gb|AAH45970.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Danio
           rerio]
 gi|182891032|gb|AAI64668.1| Psma4 protein [Danio rerio]
          Length = 261

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 61/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST-QNS---AEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +      + +   A  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLSAALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|327270997|ref|XP_003220274.1| PREDICTED: proteasome subunit alpha type-5-like [Anolis
           carolinensis]
          Length = 232

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 49/161 (30%), Gaps = 9/161 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    V +A + +++    +  ++  K+  +          G+          
Sbjct: 34  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDSHIG-RQKEGACISTCKNNHW 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM-----DKYLRNLEAMILIA--DKTITLVITGMGDV 127
                      + ++   LA  +           R     +L    D+    +       
Sbjct: 92  FTYNEIMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSG 151

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +    AIGS    A S+ + +     + +E  + ++ I
Sbjct: 152 TFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLVI 192


>gi|301775280|ref|XP_002923048.1| PREDICTED: proteasome subunit alpha type-4-like [Ailuropoda
           melanoleuca]
          Length = 261

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|123416081|ref|XP_001304820.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121886298|gb|EAX91890.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 251

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 12/157 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTLL 72
           A T + V+    VV+A + + + G+ V      K+ ++    +  +AG    +     L+
Sbjct: 31  AGTAIGVQFTNGVVLAAEKKNT-GRLVDYLFPEKMAKIDGHIVTAVAGLTADANTLVDLM 89

Query: 73  ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITG 123
               +K  +  +      QL+R   +    +     LR      LIA         +   
Sbjct: 90  RTSAQKYLKTYDEQMPVEQLVRMVCDEKHSYTQYGGLRPYGVSFLIAGYDRHKGCQLYLT 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                       AIG     A S  ++      +A E
Sbjct: 150 DPSGNFGGWKATAIGENNQTAQSILKSQYKDNMTATE 186


>gi|73974928|ref|XP_532362.2| PREDICTED: similar to Proteasome subunit alpha type 4 (Proteasome
           component C9) (Macropain subunit C9) (Multicatalytic
           endopeptidase complex subunit C9) (Proteasome subunit L)
           [Canis familiaris]
          Length = 261

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|322801291|gb|EFZ21978.1| hypothetical protein SINV_09740 [Solenopsis invicta]
          Length = 257

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  +++A + + +         + K+ +L    +    AG ++DA  L  
Sbjct: 30  HAGTCLGILANDGILLAAEKRNTNKLLDEVFFSEKIYKLNDDIV-CSVAGITSDANVLTN 88

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q   +            + + +      R     IL           + 
Sbjct: 89  ELRLIAQRYLLQYGEAIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKYYGYQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                          IG+  + A+S+ +       +     + AM++A
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKEGETTL---KDAMALA 193


>gi|297825981|ref|XP_002880873.1| hypothetical protein ARALYDRAFT_481580 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326712|gb|EFH57132.1| hypothetical protein ARALYDRAFT_481580 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 249

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 61/166 (36%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V++ +  ++    +  +N R++  + +   +A  AG +AD   ++ 
Sbjct: 33  NSGTVVGIKCKDGIVMSVEKLIASKMMLPGSN-RRIHSVHRHAGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +    +        R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L  ++ + +E   +   I
Sbjct: 151 IEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMTCKEGVIEVAKI 196


>gi|168022041|ref|XP_001763549.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685342|gb|EDQ71738.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 235

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 21/188 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +++  K++ L     +  ++G   D+  L+ +
Sbjct: 32  GQTSLGIKASNGVVIATEKKLPS-ILVDESSINKIQSLTPNIGVV-YSGMGPDSRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ + Y           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAQTYQRLYQEPIPLSQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       AIG   S A +      +     E+    A+          I   +  
Sbjct: 150 DPSGSYFSWKASAIGKNVSNAKTFLEKRYTDDMELEDAIHTAILTLKEGFEGQI---SGK 206

Query: 179 NIVLETLK 186
           NI +  + 
Sbjct: 207 NIEIGIID 214


>gi|225440238|ref|XP_002283849.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147805763|emb|CAN65016.1| hypothetical protein VITISV_034262 [Vitis vinifera]
 gi|297741727|emb|CBI32859.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 60/166 (36%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  +   + ++  + R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVIGIKCKDGIVLGVEKLI-ASKMMLPGSNRRIHSVHRHSGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +    +        R+  Y+                ++   D+    +  
Sbjct: 91  RAKAEATNYQSVYGEAIPVKELAERVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L  ++ S  +   +   I
Sbjct: 151 VEPSGVSYRYFGAAIGKGRQAAKTEIEKLKLSELSCRQGVIEVAKI 196


>gi|15219317|ref|NP_178042.1| 20S proteasome alpha subunit B, putative [Arabidopsis thaliana]
 gi|145327739|ref|NP_001077845.1| 20S proteasome alpha subunit B, putative [Arabidopsis thaliana]
 gi|145327741|ref|NP_001077846.1| 20S proteasome alpha subunit B, putative [Arabidopsis thaliana]
 gi|75245585|sp|Q8L4A7|PSA2B_ARATH RecName: Full=Proteasome subunit alpha type-2-B; AltName: Full=20S
           proteasome alpha subunit B-2
 gi|20453128|gb|AAM19806.1| At1g79210/YUP8H12R_1 [Arabidopsis thaliana]
 gi|21689609|gb|AAM67426.1| At1g79210/YUP8H12R_1 [Arabidopsis thaliana]
 gi|332198094|gb|AEE36215.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana]
 gi|332198095|gb|AEE36216.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana]
 gi|332198096|gb|AEE36217.1| proteasome subunit alpha type-2-B [Arabidopsis thaliana]
          Length = 235

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 21/190 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+ +K++ L        ++G   D   L+ +
Sbjct: 32  GQTSLGIKASNGVVIATEKKLPS-ILVDEASVQKIQHLTPNIG-TVYSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+         +I   ++ 
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEI---SSK 206

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 207 NIEIGKIGTD 216


>gi|302831556|ref|XP_002947343.1| 20S proteasome alpha subunit F [Volvox carteri f. nagariensis]
 gi|300267207|gb|EFJ51391.1| 20S proteasome alpha subunit F [Volvox carteri f. nagariensis]
          Length = 283

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 62/167 (37%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++ D  VV+A   +    Q+ + +  RKV ++     IA  AG + D  +L + 
Sbjct: 32  GSCTVGLKSDTHVVLATLKR---SQSELSSFQRKVFKIDDHLGIA-IAGLTGDGRSLCKY 87

Query: 75  LEKKLEQYP---------NQLLRSSVELAK--DWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +           +L+R   + A+    R  K    +  ++   D     + + 
Sbjct: 88  MRNECINHRYVYESSMPVGRLVRLVADKAQVCTQRSWKRPYGVGLLVAGVDSQGPHLYST 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
                  E   MAIGS    A +       T    + +E+ + ++  
Sbjct: 148 CPSGNYYEYKAMAIGSRSQAAKTYLEKHFETFPGANLDELVQHSLRA 194


>gi|149691753|ref|XP_001489121.1| PREDICTED: similar to Proteasome subunit alpha type-4 (Proteasome
           component C9) (Macropain subunit C9) (Multicatalytic
           endopeptidase complex subunit C9) (Proteasome subunit L)
           [Equus caballus]
          Length = 261

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|148227030|ref|NP_001089811.1| hypothetical protein LOC734876 [Xenopus laevis]
 gi|76779672|gb|AAI06639.1| MGC132180 protein [Xenopus laevis]
          Length = 261

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 59/191 (30%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L        AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNDDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + L TL   +
Sbjct: 210 KVELATLTREN 220


>gi|4506185|ref|NP_002780.1| proteasome subunit alpha type-4 isoform 1 [Homo sapiens]
 gi|77735717|ref|NP_001029553.1| proteasome subunit alpha type-4 [Bos taurus]
 gi|156713442|ref|NP_001096137.1| proteasome subunit alpha type-4 isoform 1 [Homo sapiens]
 gi|109082066|ref|XP_001108234.1| PREDICTED: proteasome subunit alpha type-4-like isoform 5 [Macaca
           mulatta]
 gi|114658352|ref|XP_001150677.1| PREDICTED: proteasome subunit alpha type-4 isoform 10 [Pan
           troglodytes]
 gi|114658354|ref|XP_001150746.1| PREDICTED: proteasome subunit alpha type-4 isoform 11 [Pan
           troglodytes]
 gi|114658356|ref|XP_510528.2| PREDICTED: proteasome alpha 4 subunit isoform 14 [Pan troglodytes]
 gi|114658358|ref|XP_001150950.1| PREDICTED: proteasome alpha 4 subunit isoform 12 [Pan troglodytes]
 gi|114658360|ref|XP_001151019.1| PREDICTED: proteasome subunit alpha type-4 isoform 13 [Pan
           troglodytes]
 gi|194039481|ref|XP_001926262.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Sus scrofa]
 gi|296223921|ref|XP_002757825.1| PREDICTED: proteasome subunit alpha type-4-like [Callithrix
           jacchus]
 gi|296228626|ref|XP_002759892.1| PREDICTED: proteasome subunit alpha type-4-like [Callithrix
           jacchus]
 gi|297297036|ref|XP_002804949.1| PREDICTED: proteasome subunit alpha type-4-like [Macaca mulatta]
 gi|297697231|ref|XP_002825769.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Pongo
           abelii]
 gi|297697233|ref|XP_002825770.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Pongo
           abelii]
 gi|311260594|ref|XP_003128492.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Sus scrofa]
 gi|332844466|ref|XP_003314855.1| PREDICTED: proteasome subunit alpha type-4 [Pan troglodytes]
 gi|130861|sp|P25789|PSA4_HUMAN RecName: Full=Proteasome subunit alpha type-4; AltName:
           Full=Macropain subunit C9; AltName: Full=Multicatalytic
           endopeptidase complex subunit C9; AltName:
           Full=Proteasome component C9; AltName: Full=Proteasome
           subunit L
 gi|122140948|sp|Q3ZCK9|PSA4_BOVIN RecName: Full=Proteasome subunit alpha type-4
 gi|21465644|pdb|1IRU|C Chain C, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465658|pdb|1IRU|Q Chain Q, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|220030|dbj|BAA00660.1| proteasome subunit C9 [Homo sapiens]
 gi|13529191|gb|AAH05361.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
           sapiens]
 gi|18490884|gb|AAH22445.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
           sapiens]
 gi|28839483|gb|AAH47667.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
           sapiens]
 gi|32879911|gb|AAP88786.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
           sapiens]
 gi|61361191|gb|AAX42008.1| proteasome subunit alpha type 4 [synthetic construct]
 gi|67970776|dbj|BAE01730.1| unnamed protein product [Macaca fascicularis]
 gi|73586888|gb|AAI02103.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Bos taurus]
 gi|119619569|gb|EAW99163.1| proteasome (prosome, macropain) subunit, alpha type, 4, isoform
           CRA_a [Homo sapiens]
 gi|119619570|gb|EAW99164.1| proteasome (prosome, macropain) subunit, alpha type, 4, isoform
           CRA_a [Homo sapiens]
 gi|123983547|gb|ABM83465.1| proteasome (prosome, macropain) subunit, alpha type, 4 [synthetic
           construct]
 gi|123998149|gb|ABM86676.1| proteasome (prosome, macropain) subunit, alpha type, 4 [synthetic
           construct]
 gi|261859964|dbj|BAI46504.1| proteasome (prosome, macropain) subunit, alpha type, 4 [synthetic
           construct]
 gi|296475399|gb|DAA17514.1| proteasome subunit alpha type-4 [Bos taurus]
          Length = 261

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|255641143|gb|ACU20849.1| unknown [Glycine max]
          Length = 249

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 56/166 (33%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    VV+  +  +     +  +N R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVIGIKCKDGVVLGVEKLIPSKMMLPGSN-RRIHSVHRHSGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +             R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEATNYDSVYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L     +  +   +   I
Sbjct: 151 VEPSGVSYRYFGAAIGKGRQAAKTEIEKLKLADMTCRQGVIEVAKI 196


>gi|73921826|sp|Q4R932|PSA4_MACFA RecName: Full=Proteasome subunit alpha type-4
 gi|67967814|dbj|BAE00389.1| unnamed protein product [Macaca fascicularis]
          Length = 261

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 61/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
              +          IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPNGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|237842421|ref|XP_002370508.1| proteasome subunit alpha type 1, putative [Toxoplasma gondii ME49]
 gi|211968172|gb|EEB03368.1| proteasome subunit alpha type 1, putative [Toxoplasma gondii ME49]
          Length = 247

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 22/175 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + +R +  VV+    +          + +K+ ++     +A  +G +ADA  +   
Sbjct: 32  GTCCVGLRSNTHVVLCSLKRAVSKF---AGHHQKLFKIDDHVGVA-MSGITADAKVISNF 87

Query: 75  LEKKLEQYPNQLLRSS-----------VELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +                      A   R  K    +  +    D     +   
Sbjct: 88  MRNECFHHKYVYDAPIPVGRLVLMVADKSQANTQRSGKRPFGVGLLAAGYDDAGPHLFET 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEI---ARKAMSI--AAD 171
                  E+  MA G+    + +            S EE+   A KA+    AAD
Sbjct: 148 CPSGNYFESYAMAFGARSQSSKTYLERNFENFPGLSPEELELHAMKALQASLAAD 202


>gi|156099356|ref|XP_001615680.1| 20S proteasome beta 4 subunit [Plasmodium vivax SaI-1]
 gi|148804554|gb|EDL45953.1| 20S proteasome beta 4 subunit, putative [Plasmodium vivax]
          Length = 195

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 45/163 (27%), Gaps = 12/163 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ ++    +++A D         +K + +       GN      GS  D     E + 
Sbjct: 3   TLIGLKGKNFIILAVDTYSVNSIIKLKNDDKTKFYDINGNKCLLLGGSIGDRIQFGEFIR 62

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL-RNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           K +  Y  Q        +  +   K L   L       +  I       G  L   + + 
Sbjct: 63  KNVHLYQYQNSTDLFVKSFAFFTRKNLAYYLRRNPYEVNCLIAGYDNKDGYQLYWCDYLS 122

Query: 136 --------AIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                   A G G                + EE   I +K   
Sbjct: 123 NMDAVNKGAHGYGAYLVNGILDKYYHENMNLEEALLIFKKCFE 165


>gi|145513030|ref|XP_001442426.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409779|emb|CAK75029.1| unnamed protein product [Paramecium tetraurelia]
          Length = 194

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 50/165 (30%), Gaps = 15/165 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE--- 73
           +I  ++    V++A DG ++     +K    K+ +L    I  G +G  AD  +  E   
Sbjct: 3   SIFGLQGGDFVIVACDGSIAHSILKIKETEDKILKLDDHKIF-GISGEGADRNSFGEIVH 61

Query: 74  ----RLEKKLEQYPNQLLRSS---VELAKDWRMDKYLRNLEAMILIADKT-ITLVITGMG 125
                +  K   Y N    +       A+  R          ++   D      +     
Sbjct: 62  KNHCLIRYKTGGYMNLQETAHFVRSMYAQAIRSRDGPHQCNGLLGGVDSDGTPSLYWLDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMS 167
                +    A G    + L           + E   EI +K + 
Sbjct: 122 LGSLQKITRGAQGYANYFLLGLLDNQYKPNLTKEEGIEIIKKCIK 166


>gi|315048993|ref|XP_003173871.1| proteasome component PRE6 [Arthroderma gypseum CBS 118893]
 gi|311341838|gb|EFR01041.1| proteasome component PRE6 [Arthroderma gypseum CBS 118893]
          Length = 268

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 51/169 (30%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+ +G+VV+  + + ++     +    K+  +     +A FAG +ADA  L++
Sbjct: 29  RGTCAVGVKGEGIVVLGCEKRSAMKLQDTRITPSKIGLIDNHVCLA-FAGLNADARILVD 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   +            +A   +       +    +               +
Sbjct: 88  KARVEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDNGDKTPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 148 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKDGMDREATIQLTIKSL 196


>gi|164661781|ref|XP_001732013.1| hypothetical protein MGL_1281 [Malassezia globosa CBS 7966]
 gi|159105914|gb|EDP44799.1| hypothetical protein MGL_1281 [Malassezia globosa CBS 7966]
          Length = 198

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 55/187 (29%), Gaps = 19/187 (10%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +   G  +IA DG       +   +    +++    ++  +AG S D     E +E+ +
Sbjct: 6   GITGKGYTIIASDGNA-ARSIIKMKSDDDKQKVLSKRLVMAYAGESGDTIQFAEYIERNM 64

Query: 80  EQYPNQLLRS-------------SVELAKDWRMDKYLRNLEAMILIADKT--ITLVITGM 124
             Y  +L+ S                   +    ++   +  ++   D+      +    
Sbjct: 65  RLYSIRLMLSNNIDLRPKAAASWIRSQLAEAIRSRHPYQVNLLLGGYDEPTSEPALYWVD 124

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIV 181
                 +    A G      LS          S +E   + ++ +       V   +N  
Sbjct: 125 YLGTLVQVPFAAHGYASYLTLSTMDRYHRPDMSLDEGLKLLKQCIEEMRKRFVIDVNNFN 184

Query: 182 LETLKVG 188
           +  +   
Sbjct: 185 VRVITRD 191


>gi|38048537|gb|AAR10171.1| similar to Drosophila melanogaster ProsMA5 [Drosophila yakuba]
          Length = 185

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 20/146 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + +++    ++ +   K+  + K    A  +G  ADA TL+ER
Sbjct: 34  GSTAIGICTPEGVVLAVEKRITS-PLMVSSTVEKIVEVDKHIGCAT-SGLMADARTLIER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKT-- 116
              + + +           +    +                    R     IL A     
Sbjct: 92  ARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAG 151

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGS 142
              +           +G  AIGSG  
Sbjct: 152 KPQLWHMDPSGTFVRHGAKAIGSGSE 177


>gi|288959135|ref|YP_003449476.1| hypothetical protein AZL_022940 [Azospirillum sp. B510]
 gi|288911443|dbj|BAI72932.1| hypothetical protein AZL_022940 [Azospirillum sp. B510]
          Length = 189

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 54/164 (32%), Gaps = 14/164 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T I+ +     V + GD     G  +      KV R   G+ + GF  S      L  RL
Sbjct: 2   TCIVGLVDGDRVWMGGDSAGVNGLDITVRADTKVFR--NGDCLIGFTSSFRMGQLLHYRL 59

Query: 76  EKKLEQYPNQLLR----SSVELAKDWRMDKYLRNL------EAMILIADKTITLVITGMG 125
           E     +   L R      V+  +    D    +           ++  +     +    
Sbjct: 60  EVPPRDHDADLFRYLVVDFVDAVRSCLKDGGYAHRSNDVETGGTFMVGLEGRLFTVQSDY 119

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
            V E   G  AIG G  YAL +  + +      EE   KA+  A
Sbjct: 120 QVGEAGRGYHAIGCGSDYALGSLASTV--GQPPEERVLKALECA 161


>gi|296817529|ref|XP_002849101.1| proteasome component PRE6 [Arthroderma otae CBS 113480]
 gi|238839554|gb|EEQ29216.1| proteasome component PRE6 [Arthroderma otae CBS 113480]
          Length = 268

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 51/169 (30%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+ +G+VV+  + + ++     +    K+  +     +A FAG +ADA  L++
Sbjct: 29  RGTCAVGVKGEGIVVLGCEKRSAMKLQDTRITPSKIGLIDNHVCLA-FAGLNADARILVD 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   +            +A   +       +    +               +
Sbjct: 88  KARVEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDNGDKTPRL 147

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 148 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKDGMDREATIQLTIKSL 196


>gi|195353903|ref|XP_002043441.1| Pros28.1A [Drosophila sechellia]
 gi|46254570|gb|AAS86258.1| testes-specific alpha4-t1 proteasome subunit [Drosophila sechellia]
 gi|46254572|gb|AAS86259.1| testes-specific alpha4-t1 proteasome subunit [Drosophila sechellia]
 gi|194127582|gb|EDW49625.1| Pros28.1A [Drosophila sechellia]
          Length = 251

 Score = 48.8 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 21/171 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+         +K+  L K   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSPMQEDRTVQKISMLDKHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------------LEAMILIADKTITLV 120
           R + + + +                + ++ +                   + AD +   +
Sbjct: 88  RGQMECQSHRLNFDNPVTPEYITRYIAQHKQKYTQCTGRRPFGISCLVGGIDADGSA-RL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                  +  E   ++ G   +                    A ++A +A+
Sbjct: 147 FHTEPSGIFYEYKAISTGRSANTVREFFEKAYRDHEVTTKCEAIKLATRAL 197


>gi|83769807|dbj|BAE59942.1| unnamed protein product [Aspergillus oryzae]
          Length = 266

 Score = 48.4 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 17  TILT---VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           TILT   V  +  V++  + +V+    +  ++  K+  + +    A  +G  ADA  L+E
Sbjct: 53  TILTSYQVATNEGVILGVEKRVTS-TLLEASSVEKIVEIDQHIGCA-MSGLQADARNLVE 110

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRM---------------DKYLRNLEAMILIA--DKT 116
               + + +           +    +                   R     +LIA  D+ 
Sbjct: 111 HARVECQNHAFHYAEPLRVESCTQAICDLALRFGETGDDEESVMSRPFGVALLIAGFDED 170

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
              +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 171 GPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLEEAETLVLKTLK 224


>gi|327301263|ref|XP_003235324.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
 gi|326462676|gb|EGD88129.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
          Length = 269

 Score = 48.4 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 51/169 (30%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+ +G+VV+  + + ++     +    K+  +     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGEGIVVLGCEKRSAMKLQDTRITPSKIGLIDNHVCLA-FAGLNADARILVD 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLV 120
           +   + + +   +            +A   +       +    +               +
Sbjct: 89  KARVEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDNGDKTPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKDGMDREATIQLTIKSL 197


>gi|313239042|emb|CBY14025.1| unnamed protein product [Oikopleura dioica]
          Length = 251

 Score = 48.4 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 2/93 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  TI+ +R    VV+A +  +S        N+R  +      I    AG   DA +L E
Sbjct: 33  NGATIVGLRCKDGVVLATEKLISSSLHTAGDNSRIFKIDDH--IGMAAAGLLPDARSLTE 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
            L  +  ++  +  R          +  Y+   
Sbjct: 91  ILRDEATKFRREFGRPIPLKVLCHTVASYVHQY 123


>gi|3914431|sp|O24362|PSA3_SPIOL RecName: Full=Proteasome subunit alpha type-3; AltName: Full=20S
           proteasome alpha subunit G; AltName: Full=20S proteasome
           subunit alpha-7; AltName: Full=Proteasome component C8
 gi|2285802|dbj|BAA21651.1| 26S proteasome alpha subunit [Spinacia oleracea]
          Length = 249

 Score = 48.4 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 59/166 (35%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + ++    +V+  +  +   + ++  + R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTAVGIKCKDGIVLGVEKLI-QSKMMLPGSNRRIHSVHRHSGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +    +        R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEATNYESVYGEAVPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L  ++ +  E   +   I
Sbjct: 151 VEPSGISYRYFGAAIGKGKQAAKTEIEKLKLSEMTCREGIIEVAKI 196


>gi|195155696|ref|XP_002018737.1| GL25789 [Drosophila persimilis]
 gi|194114890|gb|EDW36933.1| GL25789 [Drosophila persimilis]
          Length = 242

 Score = 48.4 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 14/163 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ +R D  V+IA D  V  G      +  ++ ++    II G  G+  D       
Sbjct: 22  GSSVIGIRYDKGVLIAADTTVFEGSVPRYQDVDRIFKI-NKQIIMGGGGNFHDVQMYRRT 80

Query: 75  LEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNL-----EAMILIAD---KTITLVITG 123
           + K++     Y +        LA         R L        +++A         + T 
Sbjct: 81  IGKQISSDRIYQDGFEMKPKSLALWLMNTTNARRLALDATNVELVVAGMQPDEGPYLATI 140

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  +  V A G      +S  R     + S  E  ++A+
Sbjct: 141 GRPEGISDGYVAATGPARQTVISLVRDKKPKERSFTE--KEAI 181


>gi|110668370|ref|YP_658181.1| proteasome subunit alpha [Haloquadratum walsbyi DSM 16790]
 gi|109626117|emb|CAJ52569.1| proteasome alpha-2 subunit [Haloquadratum walsbyi DSM 16790]
          Length = 247

 Score = 48.4 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 24/184 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                L +R  G VVIA   + S    +   +  K+ +L +    A     +     + +
Sbjct: 34  RGAPSLGIRTTGGVVIAAQRRTSS-SLMEAESIEKLHKLDEYIGAASAGHVADARKLIDD 92

Query: 74  --------RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT------ITL 119
                   RL          L R+  +  ++       R   A +LIA            
Sbjct: 93  AQTAAQRNRLRYGEPMDVRALTRALSDEIQESTQIGGTRPFGAALLIAGVDGSKSDPEPR 152

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIARKAM------SIAA 170
           +          E   +AIG+G     +      S   +     ++A +A+        A+
Sbjct: 153 LFETDPSGAPQEWKAVAIGNGRDELQTFLEEEWSQNLTVGDGVDVAVRALLQTDAELNAS 212

Query: 171 DICV 174
           ++CV
Sbjct: 213 EVCV 216


>gi|149633630|ref|XP_001511366.1| PREDICTED: similar to Proteasome subunit alpha type 4 (Proteasome
           component C9) (Macropain subunit C9) (Multicatalytic
           endopeptidase complex subunit C9) (Proteasome subunit L)
           [Ornithorhynchus anatinus]
          Length = 261

 Score = 48.4 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGGMTLKSALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|255073093|ref|XP_002500221.1| predicted protein [Micromonas sp. RCC299]
 gi|226515483|gb|ACO61479.1| predicted protein [Micromonas sp. RCC299]
          Length = 238

 Score = 48.4 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 58/175 (33%), Gaps = 20/175 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     +V+A + + +    ++ ++  K+  +    +    +G +ADA +++E 
Sbjct: 34  GSTAIAILTKEGIVLAVERR-TQSPLMVPSSLDKIMEIDSH-VACAVSGLTADAQSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM------------DKYLRNLEAMILIADKTI---TL 119
              + + +      S    +    +            D   R     +L+A   +     
Sbjct: 92  GRVQAQNHYFTYNESMPVRSLTQSLCALSANFGTDDEDSMSRPFGVALLVAGHDVDNGYQ 151

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
           +               AIGSG   A +  +       +   AE +A   +    +
Sbjct: 152 LYHTDPSGTWTAYKAKAIGSGSEGAQTTLQEEYKDDMTLKEAENLALSTLKAVME 206


>gi|223999683|ref|XP_002289514.1| 20S proteasome subunit PAC1 [Thalassiosira pseudonana CCMP1335]
 gi|220974722|gb|EED93051.1| 20S proteasome subunit PAC1 [Thalassiosira pseudonana CCMP1335]
          Length = 270

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 48/183 (26%), Gaps = 27/183 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A T + +     VV+A + +V+ G       + K  +L       +AG    +      
Sbjct: 30  NAGTSVGILARDGVVMASERKVTSGLLAPARTSEKTYKLCPHATCTVAGLTADANILIDQ 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                 +             L+       + +     LR      L A         +  
Sbjct: 90  ARLRAGRYAYQYQEPIPIENLVEHVCNYKQAYTQYGGLRPFGVAFLFAGYDEQHGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST-----------QNSA-EEI----ARKAM 166
                         IG+      S  +A                N A EEI      +A+
Sbjct: 150 SDPSGNYSGWKATVIGANNQAGKSLLKADYGKKSEGDDEMKTDDNDASEEIEMPDVAEAL 209

Query: 167 SIA 169
            +A
Sbjct: 210 RLA 212


>gi|169806232|ref|XP_001827861.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
 gi|161779309|gb|EDQ31332.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
          Length = 232

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 42/153 (27%), Gaps = 17/153 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRRLGKGNIIA--GFAGSSADAFT 70
           H  TI+ +  DG VV+        G          K+ +L      A  G  G +     
Sbjct: 30  HGGTIIGIVCDGGVVL-------FGLNQTKSLTKEKIYKLNNKTFCAVSGLFGDANMLIQ 82

Query: 71  LLERLEKKLEQYPNQLLRS---SVELAKDWRMDKYLRNLEAMIL----IADKTITLVITG 123
              R+  K+E    +  +       + +  ++   + +     +           ++ + 
Sbjct: 83  YGRRISIKIENEILESPKPYVLCKYIGQKKQLYTNITDTRPFGVSILYCGYDDKYVLYST 142

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
                  +    AIG   +      +       
Sbjct: 143 DPSGTVNQWKAFAIGLNENLINQNLKNEYDETL 175


>gi|224061702|ref|XP_002193557.1| PREDICTED: putative Proteasome subunit alpha type 4 [Taeniopygia
           guttata]
 gi|197127388|gb|ACH43886.1| putative proteasome subunit alpha type 4 [Taeniopygia guttata]
          Length = 261

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           +A  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|310750337|ref|NP_001185531.1| proteasome subunit alpha type-4 [Gallus gallus]
          Length = 261

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           +A  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|255070011|ref|XP_002507087.1| proteasome_alpha-4 subunit [Micromonas sp. RCC299]
 gi|226522362|gb|ACO68345.1| proteasome_alpha-4 subunit [Micromonas sp. RCC299]
          Length = 248

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA   + +R +  VV+A + ++      +   + K+ +L       +AG    +      
Sbjct: 30  HAGAAVGIRTNFGVVLAAEKKILSKLLEIGTASEKMHKLDDHIAVAVAGVNSDANLLMNS 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITL-VIT 122
                ++            QL+ S  +  + +     LR      L A  DK     +  
Sbjct: 90  ARIFAQRHALSYSEQVPVEQLVHSLCDQKQGYTQFGGLRPFGVSFLFAGWDKDCGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
                        AIG+    A S  +A  +   S   A+++A K + 
Sbjct: 150 SDPSGNYAGWTATAIGANSQAAHSILKADYTEHMSILDAKKLAVKVLK 197


>gi|198476614|ref|XP_002132408.1| GA25445 [Drosophila pseudoobscura pseudoobscura]
 gi|198137777|gb|EDY69810.1| GA25445 [Drosophila pseudoobscura pseudoobscura]
          Length = 242

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 14/163 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            ++++ +R D  V+IA D  V  G      +  ++ ++    II G  G+  D       
Sbjct: 22  GSSVIGIRYDKGVLIAADTTVFEGSVPRYQDVDRIFKI-NKQIIMGGGGNFHDVQMYRRT 80

Query: 75  LEKKL---EQYPNQLLRSSVELAKDWRMDKYLRNL-----EAMILIAD---KTITLVITG 123
           + K++     Y +        LA         R L        +++A         + T 
Sbjct: 81  IGKQISSDRIYQDGFEMKPKSLALWLMNTTNARRLALDATNVELVVAGMQPDEGPYLATI 140

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  +  V A G      +S  R     + S  E  ++A+
Sbjct: 141 GRPEGISDGYVAATGPARQTVISLVRDKKPKERSFTE--KEAI 181


>gi|331237887|ref|XP_003331600.1| proteasome subunit alpha type-5 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309310590|gb|EFP87181.1| proteasome subunit alpha type-5 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 262

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/177 (11%), Positives = 52/177 (29%), Gaps = 22/177 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T +       V++  + + S  + +  ++  K+  +    +    +G  AD+ T++E 
Sbjct: 34  GSTTIAATTKEGVILGVERR-SQSKLLEASSIEKIMEIDSH-VGCAVSGLVADSRTMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAK---------------DWRMDKYLRNLEAMILIA--DKTI 117
                + +           +                        R     +LIA  D+  
Sbjct: 92  ARVVGQNHRFTFDEPIKTESVTQAVCDLALRFGESTHDEDAMMSRPFGVALLIAGCDELG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAAD 171
             +               AIGSG   A +  +       +   A+ +  + +    +
Sbjct: 152 PQLFHADPSGTFMRYDAKAIGSGSEGAQTELQERWHKSMTLQEAKLLVLQVLRHVME 208


>gi|318103605|ref|NP_001187447.1| proteasome subunit alpha type-3 [Ictalurus punctatus]
 gi|308323031|gb|ADO28653.1| proteasome subunit alpha type-3 [Ictalurus punctatus]
          Length = 255

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 41/165 (24%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRIFNIDRHVGMAVAGLLADARSLAEVS 92

Query: 73  ERLEKKLEQYPNQ--------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI-TLVITG 123
                                   +    A              ++   D+     +   
Sbjct: 93  REEASNFRSNYGHDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFILGSYDEDDGPQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L   + +  E+ ++   I
Sbjct: 153 DPSGISYGYWGCAIGKAEQAAKTEVEKLQMKEMTCRELVKEVAKI 197


>gi|194759067|ref|XP_001961771.1| GF14761 [Drosophila ananassae]
 gi|190615468|gb|EDV30992.1| GF14761 [Drosophila ananassae]
          Length = 253

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 44/172 (25%), Gaps = 16/172 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
            + T++ +R    VV+A +  +        A  R        G  IAG          + 
Sbjct: 33  KSGTVIGLRGKDCVVLAVEKIICSKLYEDDAGGRLFTIERNIGMAIAGLLADGNFIADIA 92

Query: 73  ERLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITG 123
            +      Q     +               + +   +R     ++           +   
Sbjct: 93  RQEAANYRQQYEHTIPLEQLCERVSGYMHAYTLYSAVRPFGLTVIFGSWDEMQGPQLYKI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                       A G     A +    L      AEE+    +  A +I +Y
Sbjct: 153 EPSGSFYGYFCCASGKAKQQAKTEMDKL-RFNMKAEEL----IKSAGEI-IY 198


>gi|6755196|ref|NP_036096.1| proteasome subunit alpha type-4 [Mus musculus]
 gi|9910830|sp|Q9R1P0|PSA4_MOUSE RecName: Full=Proteasome subunit alpha type-4; AltName:
           Full=Macropain subunit C9; AltName: Full=Multicatalytic
           endopeptidase complex subunit C9; AltName:
           Full=Proteasome component C9; AltName: Full=Proteasome
           subunit L
 gi|5757663|gb|AAD50538.1|AF060093_1 proteasome subunit C9 [Mus musculus]
 gi|12805051|gb|AAH01982.1| Proteasome (prosome, macropain) subunit, alpha type 4 [Mus
           musculus]
 gi|26351873|dbj|BAC39573.1| unnamed protein product [Mus musculus]
 gi|74207746|dbj|BAE40115.1| unnamed protein product [Mus musculus]
 gi|148693889|gb|EDL25836.1| mCG9679 [Mus musculus]
          Length = 261

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 59/190 (31%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVG 188
            + + TL   
Sbjct: 210 KVEIATLTRE 219


>gi|324523660|gb|ADY48280.1| Proteasome subunit alpha type-4 [Ascaris suum]
          Length = 260

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 60/200 (30%), Gaps = 24/200 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     ++IA + +        +  A K+ RL        AG    +      
Sbjct: 30  HAGTCLGILASDGILIAAEKRNVHKLLDDEVLAEKIYRLSDNIACTVAGITADANILINH 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L     + +          QL+++     + +      R     +L           +  
Sbjct: 90  LRYWAAEYKLSYGEHIPVEQLVQTLCNEKQRYTQVGGKRPFGVSLLYMGWDQHFGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS-TQN-SAEEIARKAMS-------IA--AD 171
                         IG+    A+S  +          A+++A K +S        A   +
Sbjct: 150 SDPSGNYTGWKATCIGNNHQAAVSLLKQEYKSPNLAEAKKLAMKVLSKTLDVKLSAEKME 209

Query: 172 ICVYT--NHNIVLETLKVGD 189
           + + T  N   V+E L   +
Sbjct: 210 MAILTRRNDKTVVEELTNAE 229


>gi|229092871|ref|ZP_04224005.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
          [Bacillus cereus Rock3-42]
 gi|228690493|gb|EEL44276.1| ATP-dependent endopeptidase hsl proteolytic subunit hslV
          [Bacillus cereus Rock3-42]
          Length = 49

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNI 57
           HATTI  V  +G   +AGDGQV++G   VMK  ARKVR+L +G  
Sbjct: 4  FHATTIFAVHHNGECAMAGDGQVTMGNAVVMKHTARKVRKLFQGKF 49


>gi|217071324|gb|ACJ84022.1| unknown [Medicago truncatula]
          Length = 171

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 16/139 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +  ++  K+  +      A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKEGVVLAVEKRITS-PLLEPSSVEKIMEIDDHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD------------KYLRNLEAMILIA--DKTITLV 120
              + + +           +    +                R     +LIA  D+    +
Sbjct: 92  ARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSL 151

Query: 121 ITGMGDVLEPENGVMAIGS 139
                     +    AIGS
Sbjct: 152 YYTDPSGTFWQCNAKAIGS 170


>gi|197129685|gb|ACH46183.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
          Length = 236

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 9   YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
             + +  T++L ++  G V++A D   S G         ++ ++    ++ G +G  AD 
Sbjct: 53  SPM-VTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVL-GASGDLADF 110

Query: 69  FTLL 72
             L 
Sbjct: 111 QHLF 114


>gi|325180632|emb|CCA15037.1| proteasome subunit alpha type7 putative [Albugo laibachii Nc14]
 gi|325188624|emb|CCA23156.1| proteasome subunit alpha type7 putative [Albugo laibachii Nc14]
          Length = 248

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 48/159 (30%), Gaps = 14/159 (8%)

Query: 22  RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
           R    V++A + + +          RK+ +L +  I A FAG  ADA  L+ +   + + 
Sbjct: 37  RGKDSVILAVERKETAKLQ-DPRTMRKMFQLDEN-IFAAFAGLHADARVLVNKARLECQS 94

Query: 82  YPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLE 129
           Y   +  +         +A+  +       +    +         K +  +         
Sbjct: 95  YRLTVEDAPSVEYISRYIARTQQKYTQRGGVRPFGISMLIAGYDSKGVPKLYQTDPSGTY 154

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 A+G   S              S EE    ++  
Sbjct: 155 YAWKANALGRNSSSLREFLEKNYVDNMSREEAITLSIKT 193


>gi|157138579|ref|XP_001664262.1| proteasome subunit alpha type [Aedes aegypti]
 gi|108880550|gb|EAT44775.1| proteasome subunit alpha type [Aedes aegypti]
          Length = 253

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 66/170 (38%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ +R    VV+A +  ++      ++  R        +I    +G  AD   +++
Sbjct: 33  NSGTVIGLRGKDGVVLAVEKLITSKLYEPESGTRIFTI--DSSIGMAISGMIADGRAIVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
              ++   Y  Q  R       + R+  Y         +    +++++    +   PE  
Sbjct: 91  IARQEAANYRQQYDRPIPLKQLNDRLSSYFHAYTLYSAVRPFGVSVILASWTEETGPEMY 150

Query: 134 VM--AIGSGGSYALSAARAL--MSTQNSAEEIARKA----MSIAADICVY 175
           ++  +  S G +  +  +A     T+    ++A K+    ++ A  I +Y
Sbjct: 151 MIDPSGVSCGYFGCAVGKAKQTAKTEIEKLKLAEKSVNELITTAGKI-IY 199


>gi|260951467|ref|XP_002620030.1| hypothetical protein CLUG_01189 [Clavispora lusitaniae ATCC 42720]
 gi|238847602|gb|EEQ37066.1| hypothetical protein CLUG_01189 [Clavispora lusitaniae ATCC 42720]
          Length = 248

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A T + +     VV+A + +V         +A K+  +    +   AG    +      
Sbjct: 30  NAGTAIGILSAEGVVLACETKVISKLLDNDGSAEKLYVINDQMMCAVAGMTADATILVNN 89

Query: 72  LERLEKKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++       E     L++   ++ + +     LR      + A         + T
Sbjct: 90  ARVTAQRYLKTYNEEIPCELLIKRVCDVKQGYTQHGGLRPFGVSFIYAGWDDRYGFQLYT 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                        +IG+  S A +  +       S   A E+A K +
Sbjct: 150 SNPSGNYSGWKATSIGANNSAAQTLLKKDYKDDMSLSEACELAVKVL 196


>gi|225704660|gb|ACO08176.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
          Length = 261

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|225703650|gb|ACO07671.1| Proteasome subunit alpha type 3 [Oncorhynchus mykiss]
          Length = 255

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 41/165 (24%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  +        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLILSKLYEQGSNKRIFNVDRHVGMAVAGLLADARSLSEVA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITG 123
                              L          + +   +R      ++          +   
Sbjct: 93  REEASNFRSNYGHNIPLKYLSERVAMYVHAYTLYSAVRPFGCSFILGSYDQDDGPQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L     +  E+ ++   I
Sbjct: 153 DPSGISFGYWGCAIGKAKQAAKTEIEKLQMKDMTCRELVKEVAKI 197


>gi|74225131|dbj|BAE38258.1| unnamed protein product [Mus musculus]
          Length = 248

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVERQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 195


>gi|329765695|ref|ZP_08257264.1| proteasome subunit alpha [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137761|gb|EGG42028.1| proteasome subunit alpha [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 240

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 48/168 (28%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGD--GQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             T  + +R    V++A +   +            +  +      + A      A     
Sbjct: 31  RGTLAIGIRSKEGVIMAVEEKPRA---LQTSNVTQKIFQVDYHIGVAAAGYIPDARVQVD 87

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDW-------RMDKYLRNLEAMILIADKTITL--VIT 122
             R   +  +           +AK              +R     ++IA        +  
Sbjct: 88  NARFFSQGNKMTYDEAVEVATVAKHLADQSHQFTQYSGVRPNGVALIIAGVDQKGESIYV 147

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
                   +   +AIG+G     +      +++ S  + A  +++IAA
Sbjct: 148 TDPSGTYVQYAAIAIGAGSDDVNAFLEKHYNSEMSLSDAA--SLAIAA 193


>gi|290991777|ref|XP_002678511.1| proteasome subunit beta [Naegleria gruberi]
 gi|284092124|gb|EFC45767.1| proteasome subunit beta [Naegleria gruberi]
          Length = 198

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 20/176 (11%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK---------- 77
           ++  D   S G      +  ++R++G    + G +G  +D   +++ LEK          
Sbjct: 1   MLCSDTLGSYGSLARFRSVERLRKVGNNT-LIGASGEYSDFQYIVDLLEKLVDKDFCADD 59

Query: 78  KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAI 137
           K+E  P  + +  V +  + R          ++       + +          E+  MA 
Sbjct: 60  KIETQPKAIFQYLVRIMYNRRNKFNPLWNTLIVAGVKDGKSFLGYTDLLGSNFEDDTMAS 119

Query: 138 GSGGSYALSAARALMS---------TQNSAEEIARKAMSIAADICVYTNHNIVLET 184
           G G   A    R  +          T+  A+++  K M +       + + I + T
Sbjct: 120 GYGAYLAKPILRKFLDEKGGDVNNITEQEAKDVLEKCMKVLYYRDARSINKIQIAT 175


>gi|221219640|gb|ACM08481.1| Proteasome subunit alpha type-4 [Salmo salar]
          Length = 261

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|145347357|ref|XP_001418135.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578364|gb|ABO96428.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 235

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VV+A + +V     V     +K+  L    I   ++G   D   L   
Sbjct: 32  GATSLGIKAKDGVVLATEKKVPS-ALVDATTVKKIALLTD-EIGMTYSGMGPDFRVLTRM 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ + Y           QL+R +    +++     +R     +L+A  D++   +   
Sbjct: 90  ARKETQTYYRTYKESAPVSQLVRETATTMQEFTQQGGVRPFGVSLLVAGYDESGPSLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG     A +      S     E+    A+
Sbjct: 150 DPSGSYFAWKASAIGKNMVNAKTFLEKRYSDDIELEDAIHTAI 192


>gi|70937358|ref|XP_739497.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56516540|emb|CAH84497.1| hypothetical protein PC301073.00.0 [Plasmodium chabaudi chabaudi]
          Length = 128

 Score = 48.4 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 2/101 (1%)

Query: 21  VRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           +     V IA D ++ S   T +  N  K+ ++     + G +G + D  +L E L  ++
Sbjct: 1   MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYV-GLSGLATDIQSLYELLRYRV 59

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
             Y  +             +   L +        +  +   
Sbjct: 60  NLYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGF 100


>gi|297842709|ref|XP_002889236.1| hypothetical protein ARALYDRAFT_895825 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335077|gb|EFH65495.1| hypothetical protein ARALYDRAFT_895825 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 235

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 21/190 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+ +K++ L        ++G   D   L+ +
Sbjct: 32  GQTSLGIKASNGVVIATEKKLPS-ILVDEASVQKIQHLTPNIG-TVYSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+         +I   ++ 
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEI---SSK 206

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 207 NIEIGKIGAD 216


>gi|320590812|gb|EFX03255.1| proteasome component [Grosmannia clavigera kw1407]
          Length = 208

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      ++A    V  G T++ A   K R+  K  ++A F+G   D     E ++  
Sbjct: 5   LGITGKDFTLVAASKAVMRGPTIIAARDNKTRQPNKHTLLA-FSGEPGDTVQFAEYIQAN 63

Query: 79  LEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
           ++ Y  +        A               +    +  ++   D       +       
Sbjct: 64  IQLYTMRNAAELSPSAVAHFVRGELASSLRSRKPYTVNLLLGGVDPITHKPSLYWIDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   A G    Y LS          + ++
Sbjct: 124 SLAPVPYAAHGYAQYYCLSILDKHHHPDITLDQ 156


>gi|195119133|ref|XP_002004086.1| GI18257 [Drosophila mojavensis]
 gi|193914661|gb|EDW13528.1| GI18257 [Drosophila mojavensis]
          Length = 254

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 58/194 (29%), Gaps = 23/194 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            A+T++ +     +++  + +  +    ++  + K++++ +  I   FAG +ADA  L  
Sbjct: 33  KASTVVGLCTQECIILGAEKRA-IDVLQLQRTSYKIKKIDEH-IAMTFAGLTADARILAS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTI---TLVI 121
           R + + + +       +        + K           R      L+          + 
Sbjct: 91  RAQMEAQSHRLNFNSPANVEHIARFLAKLKQNYTQCFGRRPFGVACLVGGFDCDGKPHLF 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADICVY 175
                 +  E      G             +S         SA +   +A+  A    V 
Sbjct: 151 QTDPSGIYYEWMANTTGRMAQTVNEYLTKNLSAISTIPDTLSAMKHVVRALQTATSSDV- 209

Query: 176 TNHNIVLETLKVGD 189
                 +  LK   
Sbjct: 210 --SFFDIAVLKYKQ 221


>gi|332231447|ref|XP_003264908.1| PREDICTED: proteasome subunit beta type-3-like, partial [Nomascus
           leucogenys]
          Length = 140

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 33/128 (25%), Gaps = 13/128 (10%)

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV---------ITGM 124
           RL+ +L  Y  +  R          +   L          +  I  +          +  
Sbjct: 1   RLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIPGLDPKTFKPFICSLD 60

Query: 125 G-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNI 180
                   +  +  G+          +L       E +     +AM  A D    +   +
Sbjct: 61  LIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGV 120

Query: 181 VLETLKVG 188
           ++  ++  
Sbjct: 121 IVHIIEKD 128


>gi|258571333|ref|XP_002544470.1| proteasome component PRE6 [Uncinocarpus reesii 1704]
 gi|237904740|gb|EEP79141.1| proteasome component PRE6 [Uncinocarpus reesii 1704]
          Length = 249

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 47/159 (29%), Gaps = 14/159 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + V+   +VV+  + + ++     +    K+  + +   +A FAG +ADA  L+++
Sbjct: 11  GTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKIGLIDEHVCLA-FAGLNADARILVDK 69

Query: 75  LEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLVI 121
              + + +   +            +A   +       +    +           +   + 
Sbjct: 70  ARVEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLVVGFDNGDSTPRLY 129

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                 +       AIG                    EE
Sbjct: 130 QTEPSGIYSAWKANAIGRSSKTVREFLERNHKDGMDREE 168


>gi|269861197|ref|XP_002650312.1| 20S proteasome core particle subunit beta 2 [Enterocytozoon
           bieneusi H348]
 gi|220066260|gb|EED43750.1| 20S proteasome core particle subunit beta 2 [Enterocytozoon
           bieneusi H348]
          Length = 166

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 44/124 (35%), Gaps = 10/124 (8%)

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITGMGDVLE 129
           + L     ++  +   +  +      + +Y  N+ A +++          +I+   D   
Sbjct: 4   KELRLFKYKHLKEPFITHGKQLIADYLLRYGGNIGAALILGGIDPVSGPTLISISPDGHS 63

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADI--CVYTNHNIVLET 184
            +     +GSG   A S   +      + +E   + + A+   A I   +Y+  N+ +  
Sbjct: 64  IQLDYTTMGSGSFAASSILESGFKKHMTVDEAINLGKNAIK--AGILNDLYSGSNVDIFV 121

Query: 185 LKVG 188
           +   
Sbjct: 122 IDRD 125


>gi|290559128|gb|EFD92492.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
 gi|326422488|gb|EGD71885.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 236

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 45/156 (28%), Gaps = 13/156 (8%)

Query: 19  LTVRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + +     VV   D +   L + V+  +  KV ++      A  +G  AD   L+++ + 
Sbjct: 40  VGLTGKDCVVFVADRKAHELEKLVIPESIEKVFQIDLHIG-AAISGMIADGRMLIDKAQN 98

Query: 78  KLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIADKTIT--LVITGMGD 126
             ++Y     + +             +        R     IL          +      
Sbjct: 99  NAQEYKMTYNQPADVLLIVKGISAEMQALTQYGGARPFGVSILFGGVKAGKSYIYMLDPS 158

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
               +   +AIG                  ++E++ 
Sbjct: 159 GTFFQYKAIAIGGNSEAINKNLEKEYKQDMTSEDLI 194


>gi|224085688|ref|XP_002307665.1| predicted protein [Populus trichocarpa]
 gi|222857114|gb|EEE94661.1| predicted protein [Populus trichocarpa]
          Length = 240

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 18/168 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +     + + ++ +K+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSKSHVVLACVNKA---NSELSSHQKKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y         + R  V+LA        R  K    +  ++   D++   +   
Sbjct: 88  MRTECINYSFNYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGTDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIA 169
                  E    AIGS    A +           +S +++ + A+ IA
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSDSSRDDLIKDAL-IA 194


>gi|15920658|ref|NP_376327.1| proteasome subunit alpha [Sulfolobus tokodaii str. 7]
 gi|15621441|dbj|BAB65436.1| 235aa long hypothetical proteasome alpha subunit [Sulfolobus
           tokodaii str. 7]
          Length = 235

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 58/171 (33%), Gaps = 19/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              T L V+    VV+ G+ +  +  Q +   +  KV  L    +   FAG ++D   L+
Sbjct: 28  KGWTTLGVKTKAGVVLIGEKRKAT--QLLDVDSIEKVFILDDH-VGCSFAGLASDGRILI 84

Query: 73  ERLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLV 120
           +    +  Q+            L +   ++ + +     +R     ++I          +
Sbjct: 85  DYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKL 144

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
           +             +AIG GG  A            + ++   +  +A++ 
Sbjct: 145 LMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYREDLNMQDTILLGIRALAS 195


>gi|332375857|gb|AEE63069.1| unknown [Dendroctonus ponderosae]
          Length = 249

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  + + S+ +   +   RK+  L +  ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGTNAVVLGVEKK-SVAKLQEERTVRKICLLDEH-VVMAFAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           R + + + +   +          R    L + +      R      LI          + 
Sbjct: 88  RAQIECQSHKLTVEDPVTLEYITRYIASLKQKYTQSNGRRPFGISCLIGGFDYDGTPHLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                 +  E    A G                   ST+    ++A +A+
Sbjct: 148 QTEPSGIYYEWKANATGRSAKTVREFLEKYYTSEEVSTERGTIKLAIRAL 197


>gi|171695490|ref|XP_001912669.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947987|emb|CAP60151.1| unnamed protein product [Podospora anserina S mat+]
          Length = 293

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 54/201 (26%), Gaps = 45/201 (22%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  V+       AN R         ++  ++G   D    ++
Sbjct: 33  NGGTSIGIRCKDGVVLAVEKIVTSKLLKPGANKRIATVDRHLGVV--YSGMLPDGRHFVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL------------------------------ 103
           R   +   + +             RM  YL                              
Sbjct: 91  RARDEARSWRDNFKTPITTSDLASRMGNYLQAHTLYQSVRPFGITAIVGGFDAQEELPVD 150

Query: 104 ------RNLEAMILIADKTI--TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                  +  A     DK      +       L       A G G   A +    L    
Sbjct: 151 GQVGSGPSCGAGGKNPDKKYGGPFLYMIEPSGLYWGYYGAATGKGRQAAKAELEKL---D 207

Query: 156 NSAEEIA-RKAMSIAADICVY 175
            + E I   +A+  AA I +Y
Sbjct: 208 LTGEGITLEEAVKEAARI-IY 227


>gi|12802860|gb|AAK08097.1| putative 20S proteasome beta2 subunit [Ceratitis capitata]
          Length = 83

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 6/77 (7%)

Query: 90  SVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGDVLEPENGVMAIGSGGSY 143
              +A +  + ++L   +  I  A      DKT + +          +     +GSG   
Sbjct: 2   VPVVAANTLLKQFLFRYQGHISAALVLGGVDKTGSYIYCIHPHGSTDKLPYATMGSGSLA 61

Query: 144 ALSAARALMSTQNSAEE 160
           A+S   +      + EE
Sbjct: 62  AMSVFESRWKPDMTEEE 78


>gi|9653292|gb|AAB47113.2| proteasome beta-type subunit RN3 [Rattus sp.]
          Length = 140

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
              + +  T++L V+ D  VVIA D   S G      N  +  RL    ++ G +G  AD
Sbjct: 46  QNPM-VTGTSVLGVKSDCGVVIAADMLGSYGSLARLRNISRFMRLNDSTML-GASGDYAD 103

Query: 68  AFTLLERL 75
              L + L
Sbjct: 104 FQYLKQVL 111


>gi|56754539|gb|AAW25457.1| SJCHGC09091 protein [Schistosoma japonicum]
 gi|226470010|emb|CAX70286.1| 20S proteasome subunit alpha 8 [Schistosoma japonicum]
 gi|226489092|emb|CAX74895.1| 20S proteasome subunit alpha 8 [Schistosoma japonicum]
 gi|226489094|emb|CAX74896.1| 20S proteasome subunit alpha 8 [Schistosoma japonicum]
          Length = 235

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 44/159 (27%), Gaps = 11/159 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERLEK 77
           + +R    VV+A   + +         ++  +     G + +G +           +  +
Sbjct: 35  VGIRAANGVVLAAVKKFTSKLMDESTVSKIEQITNGIGMVYSGLSPDYRVLVKQARKSSQ 94

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA----DKTITLVITGMGDV 127
             +          QL+     + +++     +R     +L+A    D     +       
Sbjct: 95  SYQLAYGEPISPEQLVIRIAAVMQEYTQSGGVRPFGVSLLVAGWDRDLQRPYLYQCDPSG 154

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       S      +     E+    A+
Sbjct: 155 TYFPWKATALGQNSQNGKSFLEKRYNENLELEDATHAAI 193


>gi|74151744|dbj|BAE29663.1| unnamed protein product [Mus musculus]
          Length = 261

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 59/190 (31%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDLACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVG 188
            + + TL   
Sbjct: 210 KVEIATLTRE 219


>gi|291410735|ref|XP_002721651.1| PREDICTED: proteasome alpha 4 subunit-like [Oryctolagus cuniculus]
          Length = 306

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 75  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 134

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 135 LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 194

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 195 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 254

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 255 KVEIATLTREN 265


>gi|171185842|ref|YP_001794761.1| proteasome subunit alpha [Thermoproteus neutrophilus V24Sta]
 gi|170935054|gb|ACB40315.1| Proteasome endopeptidase complex [Thermoproteus neutrophilus
           V24Sta]
          Length = 241

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/172 (11%), Positives = 48/172 (27%), Gaps = 14/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
                + V+    VV+  + +  +      ++  K+  + +      +G    +      
Sbjct: 34  RGWPTVGVKCRSGVVLVAEKR-KISALFDPSSLEKIYLVDEHVAASPSGLLADARILIDY 92

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITG 123
              +        ++      L ++   L + +      R     +L+A        +   
Sbjct: 93  ARDVALSHRFIYDEPIDIELLTKAVCNLKQQYTQFGGTRPFGVALLVAGVDRHGARLFQT 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADI 172
               +       AIG+                       E+A KA++ A +I
Sbjct: 153 DPSGVYIGYFATAIGADSGTISEFLEKNYKFDLGMGECVELAVKALASAVEI 204


>gi|147905508|ref|NP_001080690.1| proteasome alpha 4 subunit [Xenopus laevis]
 gi|27924191|gb|AAH44983.1| Psma4-prov protein [Xenopus laevis]
          Length = 261

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 17/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  V++A + + ++ + +      +       ++    AG ++DA  L  
Sbjct: 30  HAGTCLGILANDGVLLAAERR-NIHKLLDDVFFSEKIYKLNDDMACSVAGITSDANVLTN 88

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y           QL+ +  ++ + +      R     +L           + 
Sbjct: 89  ELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTN 177
                          IG+  + A+S  +           SA  +A K ++   D+   + 
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGGMTLKSALALAVKVLNKTMDVSKLSA 208

Query: 178 HNIVLETLKVGD 189
             + L TL   +
Sbjct: 209 EKVELATLTREN 220


>gi|118482270|gb|ABK93062.1| unknown [Populus trichocarpa]
 gi|118485473|gb|ABK94592.1| unknown [Populus trichocarpa]
          Length = 281

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 18/168 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +     + + ++ +K+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSKSHVVLACVNKA---NSELSSHQKKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y         + R  V+LA        R  K    +  ++   D++   +   
Sbjct: 88  MRTECINYSFNYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGTDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIA 169
                  E    AIGS    A +           +S +++ + A+ IA
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSDSSRDDLIKDAL-IA 194


>gi|260948874|ref|XP_002618734.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238848606|gb|EEQ38070.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 284

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 60/195 (30%), Gaps = 24/195 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + ++    +V+A + + +        N +         I   ++G   D   L++R
Sbjct: 65  GVTTIGIKSASGIVLATERKANSNLLKNDCNNKVEMITPD--IAMTYSGMGPDFRVLVDR 122

Query: 75  --------LEKKLEQYP--NQLLRSSVELAKDWRMDKYLRNLEAMILIAD----KTITLV 120
                    ++   +YP    +++    + ++      +R     +L+           +
Sbjct: 123 ARKLAHTNYKRIYNEYPPVKIMVQELAMVMQESTQSGGIRPFGVSLLVGGYDQHSEKFQL 182

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM-----SIAADICVY 175
                          AIG     A +      +     E++   A+     S+  ++   
Sbjct: 183 YQVDPSGSYFPWKATAIGKTAVSAKTFLEKRWNEDLELEDVIHVALLALKESVDGEL--- 239

Query: 176 TNHNIVLETLKVGDE 190
           T  N+ +  +    +
Sbjct: 240 TGENLDICVISDPQD 254


>gi|21362819|sp|Q975G5|PSA_SULTO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
           proteasome alpha subunit; AltName: Full=Proteasome core
           protein PsmA
          Length = 242

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 58/171 (33%), Gaps = 19/171 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              T L V+    VV+ G+ +  +  Q +   +  KV  L    +   FAG ++D   L+
Sbjct: 35  KGWTTLGVKTKAGVVLIGEKRKAT--QLLDVDSIEKVFILDDH-VGCSFAGLASDGRILI 91

Query: 73  ERLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLV 120
           +    +  Q+            L +   ++ + +     +R     ++I          +
Sbjct: 92  DYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
           +             +AIG GG  A            + ++   +  +A++ 
Sbjct: 152 LMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYREDLNMQDTILLGIRALAS 202


>gi|281209431|gb|EFA83599.1| 20S proteasome subunit alpha-3 [Polysphondylium pallidum PN500]
          Length = 248

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 14/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T++ +R    VVI  +  +        +N R        G  IAGF   +       
Sbjct: 33  NSGTVVAIRAKDGVVIGVEKIIPSKMLESTSNRRIHSIDLHVGIGIAGFLTDARQLVLRA 92

Query: 73  ERLEKKLEQYPNQL--------LRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
               K+ +Q   Q           +S   A               ++  D     +    
Sbjct: 93  RDEAKQYKQVYGQPIPIKVLSQRIASFCHAFTLYGSVRPFGCSITVVGIDSYGPQLFLIE 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
                      A+G G   A +    +     +     R+A+ + + I +Y+
Sbjct: 153 PSGSCIGYFGTAMGKGKQAAKNELEKVKFADIT----CREAIKLVSKI-IYS 199


>gi|71834518|ref|NP_001025358.1| proteasome subunit alpha type-3 [Danio rerio]
 gi|66911343|gb|AAH97109.1| Zgc:114044 [Danio rerio]
          Length = 255

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L E
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRIFNIDRHVGMA-VAGLLADARSLSE 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTI-TLVI 121
              ++   + +             R+  Y+                ++   D+     + 
Sbjct: 91  VAREEASSFRSNYGHDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFILGSYDEDDGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L     +  E+ ++   I
Sbjct: 151 MVDPSGIAYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRELVKEVAKI 197


>gi|255715817|ref|XP_002554190.1| KLTH0E16324p [Lachancea thermotolerans]
 gi|238935572|emb|CAR23753.1| KLTH0E16324p [Lachancea thermotolerans]
          Length = 250

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 56/168 (33%), Gaps = 19/168 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L +R    V+IA + + +     +  +  KV  +      A ++G   D   L+++
Sbjct: 31  GVTSLGIRATNGVIIATEKKSTS-SLALTESLSKVAHITPDIG-AAYSGMGPDFRVLIDK 88

Query: 75  LEKKLEQYPNQ----------LLRSSVELAKDWRMDKYLRNLEAMILIADKTIT---LVI 121
             K    +  +          L+    ++ ++      +R     +L+A         + 
Sbjct: 89  SRKVAHTHYKRIYNEYPPTKILVAEVAKIMQEATQSGGVRPFGVSLLVAGYDEHNGYGLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                         AIG G + A +      + +   E+    A+ IA
Sbjct: 149 QVDPSGSYFPWKATAIGKGATAAKTFLEKRWNDELELED----AIHIA 192


>gi|229367458|gb|ACQ58709.1| Proteasome subunit alpha type-4 [Anoplopoma fimbria]
          Length = 261

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           +A  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMTLSTALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|229366484|gb|ACQ58222.1| Proteasome subunit alpha type-7 [Anoplopoma fimbria]
          Length = 251

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSVE------LAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D     + 
Sbjct: 88  RARVECQSHRLTVEDPVTMEYITRYIATLKQRYTQSNGRRPFGISALIVGSDDDGTPRLH 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMST-----QNSAEEIARKAM 166
                         AIG              +       N   ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIAGDNETIKLAIKAL 197


>gi|242791663|ref|XP_002481803.1| proteasome component Pre6, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218718391|gb|EED17811.1| proteasome component Pre6, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 271

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 49/169 (28%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V+   +VV+  + + ++     +    K+  +     +A FAG +ADA  L++
Sbjct: 30  RGTCAVGVKGKDIVVLGCEKRSAMKLQDTRITPSKIGLIDTHVCLA-FAGLNADARILID 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           +   + + +   +            +A   +       +    +               +
Sbjct: 89  KARLEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDKGDNTPRL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                  +       AIG                    E   ++  K++
Sbjct: 149 YQTEPSGIYSAWKANAIGRSSKTVREFLERNHKDNMDREATLQLTIKSL 197


>gi|24581176|ref|NP_608698.2| proteasome beta4R1 subunit [Drosophila melanogaster]
 gi|18447102|gb|AAL68142.1| AT30033p [Drosophila melanogaster]
 gi|22945374|gb|AAF51231.3| proteasome beta4R1 subunit [Drosophila melanogaster]
 gi|220950992|gb|ACL88039.1| CG17301-PA [synthetic construct]
 gi|220957990|gb|ACL91538.1| CG17301-PA [synthetic construct]
          Length = 215

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/163 (11%), Positives = 46/163 (28%), Gaps = 14/163 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL V+    +++A D   +     +    RK  R+    +++  AG   D     + + 
Sbjct: 3   TILGVKGTDFIILASDTMRNKSAMWLDDEVRKTHRISDYCMMST-AGDGGDCLKFSDFIL 61

Query: 77  KKLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMIL------IADKTITLVITGMGD 126
           + ++ Y                    +  YL++     +          +   +      
Sbjct: 62  RNMDLYKITNGYDLTVRGAVHFIRRHLSAYLKSDCTFQVSLLVGGYDLTSGPELHYIDYL 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                      G+  ++                 A ++ +K +
Sbjct: 122 GNSVPVRYGGHGAAMNFCTPILEEFYKPDMDTQAAYDVIKKCV 164


>gi|332225720|ref|XP_003262032.1| PREDICTED: proteasome subunit alpha type-7-like isoform 2 [Nomascus
           leucogenys]
          Length = 250

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 53/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                         AIG              +         A ++A KA+
Sbjct: 148 QTDPSGNYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKAL 197


>gi|281338284|gb|EFB13868.1| hypothetical protein PANDA_000453 [Ailuropoda melanoleuca]
          Length = 233

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 55/181 (30%), Gaps = 29/181 (16%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-----------NIIAGFA 62
             +T + +R   +VV+  + + S+ +   +   RK+  L              N++  F 
Sbjct: 30  KGSTAVGIRGTDIVVLGVEKK-SVAKLQDERTVRKICALDDHVCMAFAVILFCNVLPTFI 88

Query: 63  GSSADAFTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA--- 113
           G +ADA  ++ R   + + +   +            +A   +            + A   
Sbjct: 89  GLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIV 148

Query: 114 ---DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKA 165
              D  I  +               AIG                   +  N A ++A +A
Sbjct: 149 GFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIANDNEAIKLAIRA 208

Query: 166 M 166
           +
Sbjct: 209 L 209


>gi|294955304|ref|XP_002788469.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|239903948|gb|EER20265.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
          Length = 184

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 22/144 (15%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
             TT + VR     V+A + +      + K       RK+ R+ +  ++A FAG +ADA 
Sbjct: 29  KGTTAVGVRGKDTAVLAVERKA-----IPKLQDPRTVRKILRIDQHVMLA-FAGLNADAR 82

Query: 70  TLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMIL------IADKTI 117
            L  +   + + Y   +         +  +A   +   Y        +        ++  
Sbjct: 83  VLANKARVECQSYRLNVEDQPTVDYVARYIAGVQQQYTYKGGARPFGISTLIIGQNEQKK 142

Query: 118 TLVITGMGDVLEPENGVMAIGSGG 141
             +               AIG   
Sbjct: 143 PQLYQTDPSGSFNSWKAAAIGRNS 166


>gi|73992675|ref|XP_534472.2| PREDICTED: similar to Proteasome subunit alpha type 7 (Proteasome
           subunit RC6-1) [Canis familiaris]
          Length = 434

 Score = 47.7 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ R   +
Sbjct: 219 VGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVINRARVE 276

Query: 79  LEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVITGMGD 126
            + +   +            +A   +            + A            +      
Sbjct: 277 CQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPS 336

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                    AIG G                  T +   ++  KA+
Sbjct: 337 GTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 381


>gi|328856907|gb|EGG06026.1| hypothetical protein MELLADRAFT_72017 [Melampsora larici-populina
           98AG31]
          Length = 295

 Score = 47.7 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 65/184 (35%), Gaps = 15/184 (8%)

Query: 22  RKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQ 81
           ++   VV+A + +V+      +  + +   L   N+++G AG +ADA +L+       + 
Sbjct: 76  KRRTGVVLAAEKKVTSKLLEKEQGSSEKIFLINNNLVSGVAGYTADANSLVNYSRSVAQS 135

Query: 82  Y---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGDVLE 129
           +           Q+++   +L + +      R      L A         + +       
Sbjct: 136 HLVSFDQDMPVEQMVKRVCDLKQGYTQFGGQRPFGVSFLFAGHDPHHQFQLYSTDPSGNY 195

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICVYT--NHNIVLETLK 186
                  IGSG S A S  R         +E    A+ + +  +   T  +  +    + 
Sbjct: 196 AAWKATCIGSGNSTATSLLRQDYKDTMDLDEAIVLALKVLSKTMDATTLSSDRVEFSVIS 255

Query: 187 VGDE 190
           + +E
Sbjct: 256 LDEE 259


>gi|323509271|dbj|BAJ77528.1| cgd4_250 [Cryptosporidium parvum]
          Length = 261

 Score = 47.7 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 45/164 (27%), Gaps = 14/164 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTLLERL 75
            + +     V++  D  +         +  K+  + +  I  +AG    +          
Sbjct: 34  TVGILCKEGVILGADKAIVSKLLDQGKSLEKIYTIDRHIIAAVAGLTADANILIAQARID 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGD 126
            ++ +          QL+    +  + +     LR      L A         +      
Sbjct: 94  SQRYQYTYGEEQPVEQLVTQICDRKQSYTQFGGLRPFGVSFLFAGYDKNYGYQLYQSDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                    AIG     A S  +   +   + E+   +  K ++
Sbjct: 154 GNFSGWKATAIGQNNQTATSLLKQEWNEDLTLEQGLHLVAKVLT 197


>gi|66356910|ref|XP_625633.1| proteasome subunit alpha type 4, NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
 gi|46226753|gb|EAK87732.1| proteasome subunit alpha type 4, NTN hydrolase fold
           [Cryptosporidium parvum Iowa II]
          Length = 271

 Score = 47.7 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 45/164 (27%), Gaps = 14/164 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTLLERL 75
            + +     V++  D  +         +  K+  + +  I  +AG    +          
Sbjct: 44  TVGILCKEGVILGADKAIVSKLLDQGKSLEKIYTIDRHIIAAVAGLTADANILIAQARID 103

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGD 126
            ++ +          QL+    +  + +     LR      L A         +      
Sbjct: 104 SQRYQYTYGEEQPVEQLVTQICDRKQSYTQFGGLRPFGVSFLFAGYDKNYGYQLYQSDPS 163

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                    AIG     A S  +   +   + E+   +  K ++
Sbjct: 164 GNFSGWKATAIGQNNQTATSLLKQEWNEDLTLEQGLHLVAKVLT 207


>gi|50427903|ref|XP_462564.1| DEHA2G23562p [Debaryomyces hansenii CBS767]
 gi|49658234|emb|CAG91075.1| DEHA2G23562p [Debaryomyces hansenii]
          Length = 257

 Score = 47.7 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 46/163 (28%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA----GFAGSSADAFT 70
            +T + +     V++  + +V+    +  ++  K+  + K    A         S     
Sbjct: 34  GSTAIGISTSEGVILGVEKRVTS-SLLEHSSIEKIIEVDKHIGCAMSGLTADARSMIDHA 92

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRM----------DKYLRNLEAMILIADKTI--- 117
            +  L   L    +  + S  +   D  +              R     +LIA       
Sbjct: 93  RVSSLTHNLYYDEDIQVESLTQSVCDLALRFGEGASGEKRLMSRPFGVALLIAGIDKDKG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +  +       + +E
Sbjct: 153 PQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHKSLTLKE 195


>gi|307211266|gb|EFN87452.1| Proteasome subunit alpha type-4 [Harpegnathos saltator]
          Length = 233

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  +++A + + +         + K+ +L    +    AG ++DA  L  
Sbjct: 6   HAGTCLGILANDGILLAAEKRNTNKLLDEVFFSEKIYKLNDDIV-CSVAGITSDANVLTN 64

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q   +            + + +      R     IL           + 
Sbjct: 65  ELRLIAQRYLLQYGEAIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLY 124

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                          IG+  + A+S+ +         E   + AM++A
Sbjct: 125 QSDPSGNYGGWKATCIGNNAAAAVSSLKQEYKEG---ETTLKDAMALA 169


>gi|116782788|gb|ABK22658.1| unknown [Picea sitchensis]
          Length = 249

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 57/166 (34%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    +V+  +  ++    +  +N R++  +     +A  AG +AD   ++ 
Sbjct: 33  NSGTVIGIKCKDGIVLGVEKLIASKMLLEGSN-RRIHAVHNHAGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTITLVIT 122
           R + +   Y N             R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEATSYENTYGEPIPIKELCERVASYVHLCTLYWWLRPFGSGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L  ++ +  E   +   I
Sbjct: 151 VEPSGVAYRYFGTAIGKGRQAAKTEIEKLKLSEMTCREGVVEVAKI 196


>gi|164659496|ref|XP_001730872.1| hypothetical protein MGL_1871 [Malassezia globosa CBS 7966]
 gi|159104770|gb|EDP43658.1| hypothetical protein MGL_1871 [Malassezia globosa CBS 7966]
          Length = 231

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 57/163 (34%), Gaps = 14/163 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T + VR    VV+  +  +     V  +N +++  + K   +   AG +AD   L  
Sbjct: 33  NAGTAIGVRTKDGVVLGVENLIHSKLLVPGSN-KRIFGVDKHIAL-TSAGLTADGKHLAG 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITL---VI 121
           R  ++   + +   + +   +   R+  Y+         R   A  ++          + 
Sbjct: 91  RAREEAANFFDNYKQKTPVKSLAERIALYMQAFTLYSSVRPFGAAAILGGVDEMHGPQLF 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                 +       A+G G  +A +    L   Q S EE   +
Sbjct: 151 LVEPSGMFWGYHGCAVGKGKQFAKTEIEKLELDQMSMEEAVIE 193


>gi|197127389|gb|ACH43887.1| putative Proteasome subunit alpha type 4 [Taeniopygia guttata]
          Length = 261

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG   + A+S  +           +A  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGDNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|150863866|ref|XP_001382489.2| hypothetical protein PICST_87371 [Scheffersomyces stipitis CBS
           6054]
 gi|149385122|gb|ABN64460.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 257

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 21/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA----GFAGSSADAFT 70
            +T + +     V++  + +VS    +   +  K+  + K    A         S     
Sbjct: 34  GSTAIGISTSEGVILGVEKRVSS-SLLEHTSIEKIVEIDKHIGCAMSGLTADARSMIDHA 92

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRM----------DKYLRNLEAMILIADKTI--- 117
            +  L   L    +  + S  +   D  +              R     +LIA       
Sbjct: 93  RVSSLTHNLYYDEDIQVESLTQSVCDLALRFGEGAGGEKRLMSRPFGVALLIAGIDKDKG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
             +               AIGSG   A S  +       + +E   +A K + 
Sbjct: 153 PQLYHAEPSGTFYRYEAKAIGSGSEGAQSELQNEYHKSMTLKEAELLALKTLK 205


>gi|19111957|ref|NP_595165.1| 20S proteasome component alpha 4 Pre6 [Schizosaccharomyces pombe
           972h-]
 gi|1709760|sp|Q10329|PSA7_SCHPO RecName: Full=Probable proteasome subunit alpha type-7
 gi|5817282|emb|CAB53732.1| 20S proteasome component alpha 4 Pre6 [Schizosaccharomyces pombe]
          Length = 259

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 21/163 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK-ANARKVRR--LGKGNIIAGFAGSSADAFT 70
             TT + +R +  +VI  + +      V K  N    ++  +   ++   FAG +ADA  
Sbjct: 29  RGTTAIALRGNECIVIGVERK-----NVPKLQNVSNFQKIAMVDNHVCLAFAGLNADARI 83

Query: 71  LLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTI 117
           L+++   + + +   L            +A   +       +    +             
Sbjct: 84  LIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVSTLIAGFDVGDNT 143

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             V       +       AIG     A            S +E
Sbjct: 144 PRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDE 186


>gi|209733720|gb|ACI67729.1| Proteasome subunit alpha type-4 [Salmo salar]
          Length = 261

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA + L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGSCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   D
Sbjct: 210 KVEIATLTRED 220


>gi|67587330|ref|XP_665249.1| proteasome subunit [Cryptosporidium hominis TU502]
 gi|54655817|gb|EAL35019.1| proteasome subunit [Cryptosporidium hominis]
          Length = 261

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 45/164 (27%), Gaps = 14/164 (8%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTLLERL 75
            + +     V++  D  +         +  K+  + +  I  +AG    +          
Sbjct: 34  TVGILCKEGVILGADKAIVSKLLDQGKSLEKIYTIDRHIIAAVAGLTADANILIAQARID 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGD 126
            ++ +          QL+    +  + +     LR      L A         +      
Sbjct: 94  SQRYQYTYGEEQPVEQLVTQICDRKQSYTQFGGLRPFGVSFLFAGYDKNYGYQLYQSDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                    AIG     A S  +   +   + E+   +  K ++
Sbjct: 154 GNFSGWKATAIGQNNQTATSLLKQEWNEDLTLEQGLHLVAKVLT 197


>gi|328793299|ref|XP_397196.4| PREDICTED: hypothetical protein LOC413757 [Apis mellifera]
          Length = 622

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 59/192 (30%), Gaps = 17/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +     +++  + +           + K+ +L    +    AG ++DA  L  
Sbjct: 395 HAGTCLGILATNGILLVAERRNINKLLDEVYYSEKIYKLNDDIV-CSVAGITSDANVLTN 453

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q                + + +      R     IL           + 
Sbjct: 454 ELRLIAQRYLLQYGEPIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLY 513

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTN 177
                          IG   + A+S+ +      N     A+ +A K +S   D+   + 
Sbjct: 514 QSDPSGNYGGWKATCIGHNSAAAVSSLKQEYDNNNITLEEAKALAIKVLSKTLDLNKLSG 573

Query: 178 HNIVLETLKVGD 189
             + + TL   +
Sbjct: 574 DKVEMVTLTREN 585


>gi|217072000|gb|ACJ84360.1| unknown [Medicago truncatula]
          Length = 249

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 54/166 (32%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ +R    +V+  +  +      +  + R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVIGIRCKDGIVLGVEKLIPSKMM-LSGSNRRIHAVHRHSGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +              +  Y+                ++   D+    +  
Sbjct: 91  RAKSEATNYDSVYGDPIPVKELADHVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG G   A +    L     +  +   +   I
Sbjct: 151 VEPSGVSYRYFGAAIGKGRQAAKTEIEKLKLADMTCRQGVIEVAKI 196


>gi|145498240|ref|XP_001435108.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402237|emb|CAK67711.1| unnamed protein product [Paramecium tetraurelia]
          Length = 411

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    VV+  + + S    V +++ +KV  L    I A +AG   D   L +
Sbjct: 207 KGDTAIGIKAKNGVVLVVEKKQSS-ILVEESSVQKVALLTDN-IAATYAGLGPDFRVLSQ 264

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD---------KYLRNLEAMILIA--DKTITLVIT 122
           +  K +++Y  +             +            +R     ILIA  D+    ++ 
Sbjct: 265 QARKLVKKYDLKYQEEIFVQTLSRELAEDVQVATQRGGIRPFGVSILIAGYDEEGPHLVQ 324

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A +      +     E+    A+
Sbjct: 325 LDPSGAYYSWKATAIGKQAKNAKAFLEKRYNADMEIEDAINTAL 368


>gi|167472829|gb|ABZ81034.1| proteasome alpha 2 subunit [Clonorchis sinensis]
          Length = 235

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 43/159 (27%), Gaps = 11/159 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERLEK 77
           + +R    VV+A + + +          +        G + +G +           +  +
Sbjct: 35  VGIRATNGVVLAVEKKFTSKLIDESTIHKIENVSKNIGMVYSGLSPDYRVLVKQARKSAQ 94

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI----TLVITGMGDV 127
             E          QL+  +  + +++     +R     +LIA          +       
Sbjct: 95  AYEMAYGDTISPEQLVVRTAAVMQEYTQSGGVRPFGVSLLIAGWDYEAKRPYLYQCDPSG 154

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       S      +     ++    A+
Sbjct: 155 TYFPWKATALGHNSQNGKSFLEKRYNKDLELDDAVHAAI 193


>gi|324522490|gb|ADY48068.1| Proteasome subunit alpha type-4 [Ascaris suum]
          Length = 250

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 60/200 (30%), Gaps = 24/200 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     ++IA + +        +  A K+ RL        AG    +      
Sbjct: 30  HAGTCLGILASDGILIAAEKRNVHKLLDDEVLAEKIYRLSDNIACTVAGITADANILINH 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L     + +          QL+++     + +      R     +L           +  
Sbjct: 90  LRYWAAEYKLSYGEHIPVEQLVQTLCNEKQRYTQVGGKRPFGVSLLYMGWDQHFGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS-TQN-SAEEIARKAMS-------IA--AD 171
                         IG+    A+S  +          A+++A K +S        A   +
Sbjct: 150 SDPSGNYTGWKATCIGNNHQAAVSLLKQEYKSPNLAEAKKLAMKVLSKTLDVKLSAEKME 209

Query: 172 ICVYT--NHNIVLETLKVGD 189
           + + T  N   V+E L   +
Sbjct: 210 MAILTRRNDKTVVEELTNAE 229


>gi|308160864|gb|EFO63331.1| Proteasome subunit beta type 2 [Giardia lamblia P15]
          Length = 209

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 41/160 (25%), Gaps = 10/160 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA-----GFAGSSADAFTL 71
           ++   +    V +  D        V+K  A +  ++ +G  +      G      D    
Sbjct: 3   SVFGFKGKDFVCLVADTVFKHSILVLKECADRTVKIHEGQGMIVTGEDGDVLQFTDYIKH 62

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLE 129
             +L    + Y   +  S+  +  +             ++    D     +         
Sbjct: 63  SLKLRSLRQGYTPTVKSSANFIRTELARAIREGPYNVYVITGGVDAAGPQLYYMDYLGTM 122

Query: 130 PENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAM 166
            E+     G    + LS              A  + +  +
Sbjct: 123 GEDNFCVQGYSMYFLLSVMSEYWKPDMTKQDALALIKHCI 162


>gi|300707943|ref|XP_002996162.1| hypothetical protein NCER_100782 [Nosema ceranae BRL01]
 gi|239605438|gb|EEQ82491.1| hypothetical protein NCER_100782 [Nosema ceranae BRL01]
          Length = 233

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 17/160 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++    V++A + ++ + +    A+ +K  ++     + GF+G SAD  T++E+
Sbjct: 31  GTASIGMKTKDYVLLASEKKI-ISKLQNPASVKKHFKIYDHITL-GFSGISADVKTIVEK 88

Query: 75  LE-------------KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA--MILIADKTITL 119
                           K+E+   +L   S+   K     K         +++I   T   
Sbjct: 89  SRDFAINHEYLYDENCKVERLLEKLADLSLNFDKKDDCKKIFSRPFGASLLIIGYDTEPR 148

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE 159
           +          E    AIGSG     +            E
Sbjct: 149 LFCLDPSGSYLEYYAKAIGSGSEVLENMLEQEFDPSLDLE 188


>gi|193875858|gb|ACF24565.1| proteasome alpha 4 subunit [Gymnochlora stellata]
          Length = 249

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 53/169 (31%), Gaps = 15/169 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
            A + + +     V++A + +++     ++  A K+ ++       +AG    +      
Sbjct: 30  KAGSAVALLASDGVLLAAEKRITSKLLDIRGLAEKMYKIDDHVAVAVAGITADANILVNY 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++            QLL    +L + +     LR      L+          +  
Sbjct: 90  ARLAAQRYRLAYQEPIPIEQLLHKICDLKQGYTQFGGLRPFGVSFLVVGWDEHFGFQLYR 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS---TQN-SAEEIARKAMS 167
                        AIG+    A S  ++      T    A+ +A K ++
Sbjct: 150 SEPSGNYGGWKAAAIGNNSQNADSVLKSDYKIGGTDMKMAKTLAVKVLA 198


>gi|145501421|ref|XP_001436692.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403834|emb|CAK69295.1| unnamed protein product [Paramecium tetraurelia]
          Length = 231

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    VV+  + + S    V +++ +KV  L    I A +AG   D   L +
Sbjct: 27  KGDTAIGIKAKNGVVLVVEKKQSS-ILVEESSVQKVSLLTDN-IAATYAGLGPDFRVLSQ 84

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD---------KYLRNLEAMILIA--DKTITLVIT 122
           +  K +++Y  +             +            +R     ILIA  D+    ++ 
Sbjct: 85  QARKLVKKYDLKYQEEIFVQTLSRELAEDVQVATQRGGIRPFGVSILIAGYDEEGPHLVQ 144

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A +      +     E+    A+
Sbjct: 145 LDPSGAYYSWKATAIGKQAKNAKAFLEKRYNADMEIEDAINTAL 188


>gi|197632223|gb|ACH70835.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Salmo
           salar]
 gi|209734114|gb|ACI67926.1| Proteasome subunit alpha type-4 [Salmo salar]
 gi|225704770|gb|ACO08231.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
          Length = 261

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA + L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGSCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   D
Sbjct: 210 KVEIATLTRED 220


>gi|221118316|ref|XP_002164019.1| PREDICTED: similar to proteasome (prosome, macropain) subunit, beta
           type, 2 [Hydra magnipapillata]
          Length = 201

 Score = 47.7 bits (112), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 11/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ ++    V+ A D   +     MK++  K  +L K  ++    G S D     E + K
Sbjct: 4   IIGIQGADFVLTAADQNAARSIVRMKSDLDKNYKLSKN-LMMTVCGESGDTNNFAEYIAK 62

Query: 78  KLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMIL------IADKTITLVITGMGDV 127
            ++ Y  +        +    + K    +LR+     +        D+    +       
Sbjct: 63  NIQLYKMRNGYELTPHSGANYVRKTMADFLRSRTPYQVNLLLSGCDDEGRPALYHMDYLG 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
              +    + G G  ++LS       +  S  E+
Sbjct: 123 AMVKVPFGSHGYGSFFSLSTLDRHWRSGMSRNEV 156


>gi|66825279|ref|XP_645994.1| proteasome subunit beta type 2 [Dictyostelium discoideum AX4]
 gi|74858816|sp|Q55DY7|PSB2_DICDI RecName: Full=Proteasome subunit beta type-2
 gi|60474149|gb|EAL72086.1| proteasome subunit beta type 2 [Dictyostelium discoideum AX4]
          Length = 198

 Score = 47.7 bits (112), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 47/156 (30%), Gaps = 13/156 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L  +  G V+   D  V+     MK +  K+  +    ++   AG + D     E + 
Sbjct: 3   TLLAFKVKGGVLCLADSSVNHSIVKMKDDEDKILEIDGHKLLL-SAGEAGDRVQFTEYIS 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL--------RNLEAMILIADKTITL----VITGM 124
           K ++ Y  +        A    +   L         ++  ++   DK +      +    
Sbjct: 62  KNIKLYSLRNSYPMSTPAAANFIRNELATSIRSHPYSINLILAGYDKEVEDGGTSLYYMD 121

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                 +      G    + L           S E+
Sbjct: 122 YLGSLQKLNFGCHGYASYFLLGLLDRHHKCDLSLED 157


>gi|254567932|ref|XP_002491076.1| Alpha 2 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|238030873|emb|CAY68796.1| Alpha 2 subunit of the 20S proteasome [Pichia pastoris GS115]
 gi|328352396|emb|CCA38795.1| 20S proteasome subunit alpha 2 [Pichia pastoris CBS 7435]
          Length = 250

 Score = 47.7 bits (112), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 19/168 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    +V+A + + S    V   + RK+ ++        ++G   D   L + 
Sbjct: 31  GVTSLGIKATNGIVLATEKK-SASSLVNSEHQRKIAQITPDLG-MTYSGMGPDFRVLADA 88

Query: 75  LE-------KKLEQYPNQLLRSSVELAKDWR---MDKYLRNLEAMILIA---DKTITLVI 121
                    K++            E+AK  +       +R     +L+    D    ++ 
Sbjct: 89  SRKVSHTNYKRIYNENPPTKILVSEVAKLMQEATQSGGVRPYGVSLLVGGYDDNNGFMLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                         AIG   + A +      + +   E+    A+ IA
Sbjct: 149 QVDPSGSYFPWKATAIGKNSNAAKTFLEKRWNEELELED----AIHIA 192


>gi|15239271|ref|NP_201415.1| PAD2 (PROTEASOME ALPHA SUBUNIT D 2); endopeptidase/ peptidase/
           threonine-type endopeptidase [Arabidopsis thaliana]
 gi|12229893|sp|O24616|PSA7B_ARATH RecName: Full=Proteasome subunit alpha type-7-B; AltName: Full=20S
           proteasome alpha subunit D-2; AltName: Full=Proteasome
           component 6B; AltName: Full=Proteasome component 6C;
           AltName: Full=Proteasome subunit alpha type-4
 gi|3421082|gb|AAC32059.1| 20S proteasome subunit PAD2 [Arabidopsis thaliana]
 gi|10177129|dbj|BAB10419.1| 20S proteasome subunit PAD2 [Arabidopsis thaliana]
 gi|332010781|gb|AED98164.1| proteasome subunit alpha type-7-B [Arabidopsis thaliana]
          Length = 250

 Score = 47.7 bits (112), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+A + + +        +ARK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLAVEKKSTPKLQ-DSRSARKIVSLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   L               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESSGQETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   +
Sbjct: 203 KNIEVAVMTREE 214


>gi|296817937|ref|XP_002849305.1| proteasome component PUP2 [Arthroderma otae CBS 113480]
 gi|238839758|gb|EEQ29420.1| proteasome component PUP2 [Arthroderma otae CBS 113480]
          Length = 251

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 50/178 (28%), Gaps = 26/178 (14%)

Query: 15  ATTILT------VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSA 66
            +T +       V     VV+  + +V+    +  ++  K+  + +    A  G    + 
Sbjct: 34  GSTAIGFVITIKVATSEGVVLGVEKRVTS-TLLETSSVEKIVEIDQHIGCAMSGLQADAR 92

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK------------YLRNLEAMILIA- 113
                     +    + ++ LR          +                R     +LIA 
Sbjct: 93  SMVEHARVETQNHRFHYSEPLRVESCTQAICDLALRFGEGADGEESVMSRPFGVALLIAG 152

Query: 114 -DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
            D+    +               AIGSG   A +  +       +   AE +  K + 
Sbjct: 153 YDEDGPQLYHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHRSLTLAEAETLVLKTLK 210


>gi|330038348|ref|XP_003239574.1| 26S proteasome SU A5 [Cryptomonas paramecium]
 gi|327206498|gb|AEA38676.1| 26S proteasome SU A5 [Cryptomonas paramecium]
          Length = 230

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 19/171 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
             T + ++ D  +VI  + +++    +   N   +  L K  +    G    S      +
Sbjct: 31  GCTTIGIKSDKGIVIVTEKKINS-DLIENRNFENLINLSKSVVCCASGLTSDSRVCIQKI 89

Query: 73  ERL-------------EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL 119
                            +K  +    L+ +                +  ++   D T   
Sbjct: 90  RNFLTNNSFLFKETISIEKCAKKIGCLILNVSPGENKEFHINRPLGVAFLLCGIDHTGIH 149

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
           + +        E  ++++G+G   A+   R     + S  E   +A K+M 
Sbjct: 150 LFSIDSTGSSDERQIVSLGNGSQDAILITREGFRKKMSLTENKNLAIKSMK 200


>gi|213510924|ref|NP_001134515.1| Proteasome subunit alpha type-4 [Salmo salar]
 gi|209733934|gb|ACI67836.1| Proteasome subunit alpha type-4 [Salmo salar]
          Length = 261

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA + L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGSCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   D
Sbjct: 210 KVEIATLTRED 220


>gi|224012449|ref|XP_002294877.1| proteasome subunit alpha type 2 [Thalassiosira pseudonana CCMP1335]
 gi|220969316|gb|EED87657.1| proteasome subunit alpha type 2 [Thalassiosira pseudonana CCMP1335]
          Length = 237

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 14/165 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T L +     VVI  D + S    V     RKV R+  G+ +  +AG   D   L+ 
Sbjct: 31  NGRTALGIAATDGVVICTDKKFSS-ALVEGEGVRKVERITDGSGVV-YAGVGPDYRVLVR 88

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
           +  K  + Y           QL++S+  + +++     +R     +L+A         + 
Sbjct: 89  KARKSSQAYYREYRETKPISQLVKSTASVMQEYTQSGGVRPFGVSLLMAGMDGDGTRRLF 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                         AIG     A +            E+    A+
Sbjct: 149 QVDPSGAYFGWKATAIGKNYVNAKNFLEKRYQEDMELEDAIHTAL 193


>gi|254576831|ref|XP_002494402.1| ZYRO0A00616p [Zygosaccharomyces rouxii]
 gi|238937291|emb|CAR25469.1| ZYRO0A00616p [Zygosaccharomyces rouxii]
          Length = 250

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 53/193 (27%), Gaps = 21/193 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + V+    VVIA + + S     +     K+ ++                  + + 
Sbjct: 31  GVTSIGVKATNGVVIATEKK-SSSPLALTETLNKISQITPNIGTVYSGMGPDYRVLVDKS 89

Query: 75  LEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTIT---LVIT 122
            +     Y                  ++ ++      +R   A +L+A         +  
Sbjct: 90  RKVAHTHYKRIYGEYPPTKLLVSEIAKIMQEATQSGGVRPYGASLLVAGYDEHTGFGLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM-----SIAADICVYTN 177
                        AIG G + A +      + +   E+     +     S+  +   +  
Sbjct: 150 VDPSGSYFPWKATAIGKGSTAAKTFLEKRWNEELELEDAIHTVLLTLKESVEGE---FNG 206

Query: 178 HNIVLETLKVGDE 190
             I +  +   ++
Sbjct: 207 DTIEIAVIGDENK 219


>gi|74177575|dbj|BAE38897.1| unnamed protein product [Mus musculus]
          Length = 249

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 58/190 (30%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            Q + +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQSVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVG 188
            + + TL   
Sbjct: 210 KVEIATLTRE 219


>gi|255071211|ref|XP_002507687.1| predicted protein [Micromonas sp. RCC299]
 gi|226522962|gb|ACO68945.1| predicted protein [Micromonas sp. RCC299]
          Length = 262

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 16/167 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + V     VV+  + + +          RK++ +    I   FAG +ADA  L+ 
Sbjct: 29  KGTLAVGVCGTDCVVLGVEKKSTAKLQ-DPRTMRKIQTVDD-KICVAFAGLTADARILIN 86

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVI 121
           R   + + +   L          R    + + +     +R      LIA    +    + 
Sbjct: 87  RARTEAQSHKLTLEDSVPVEYMTRFIGGVQQKYTQSGGVRPFGLSTLIAGFSPEGKPQLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAM 166
                    E    A G                ++ +   ++A +A+
Sbjct: 147 YTDPSGTYSEWQANATGRNSKVVREWLERHYAKASGSDVVKLALRAL 193


>gi|224062113|ref|XP_002300761.1| predicted protein [Populus trichocarpa]
 gi|222842487|gb|EEE80034.1| predicted protein [Populus trichocarpa]
          Length = 242

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 18/168 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +     + + ++ +K+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSKTHVVLACVNKA---NSELSSHQKKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y         + R  V+LA        R  K    +  ++   D++   +   
Sbjct: 88  MRTECINYSFNYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGTDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIA 169
                  E    AIGS    A +           +S +++ + A+ IA
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFENFMDSSRDDLIKDAL-IA 194


>gi|145503886|ref|XP_001437915.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405076|emb|CAK70518.1| unnamed protein product [Paramecium tetraurelia]
          Length = 232

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 21/191 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +++  + + S  +       +KV +L    +   F+G +ADA  L  
Sbjct: 28  RGLCCVGVRGKDAIILGVEKK-SASRLQDVKTIKKVYQLDHN-LCMTFSGLNADARILAN 85

Query: 74  RLEKKLEQY--PNQLLRSSVELAK---------DWRMDKYLRNLEAMILIADKTITLVIT 122
           +   + +QY    +   S   +AK           R       +  +I         +  
Sbjct: 86  QTRLQCQQYKIYYEDDPSVDYIAKFTSQQQQKFTQRGGARPYGISTLIAGFSNNKPKLFQ 145

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNH- 178
                   E    ++G                    ++   +  KA+    +    + + 
Sbjct: 146 TDPSGACSEWKATSLGKSAKQVKDFLEKHWREGLHEKDALLLTTKALMDVVE----SGNK 201

Query: 179 NIVLETLKVGD 189
           NI L  ++  +
Sbjct: 202 NIELCVIRKNE 212


>gi|269986359|gb|EEZ92657.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
 gi|326422445|gb|EGD71844.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
           acidiphilum ARMAN-4_'5-way FS']
          Length = 236

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 46/156 (29%), Gaps = 13/156 (8%)

Query: 19  LTVRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + +   G +V   D +   L + V+  +  K+ ++      A  +G  AD  TL+++ + 
Sbjct: 40  VGLTGKGCIVFVADRKAHELEKLVIPESIEKIFQIDVHMA-AAISGMIADGRTLIDKAQN 98

Query: 78  KLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIAD--KTITLVITGMGD 126
             ++Y     + +             +        R     IL        T +      
Sbjct: 99  NAQEYKMTYNQPADILLVVKGISTEMQALTQYGGARPFGVSILFGGIKDNKTYLYMLDPS 158

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
               +   +AIG                    EE+ 
Sbjct: 159 GTFFQYRAIAIGGNSDIINKTLEKEYKADMDVEELI 194


>gi|147856362|emb|CAN79638.1| hypothetical protein VITISV_014475 [Vitis vinifera]
          Length = 285

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +     + + ++ +K+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSKTHVVLACVNKA---NSELSSHQKKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y         + R  V+LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSECINYSFTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       T   +S E++ + A+
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFGTFQNSSREDLIKDAL 192


>gi|255079962|ref|XP_002503561.1| predicted protein [Micromonas sp. RCC299]
 gi|226518828|gb|ACO64819.1| predicted protein [Micromonas sp. RCC299]
          Length = 253

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 56/168 (33%), Gaps = 15/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +    L ++    VV+  +  +     V  +N R++  + +   +AG AG + DA  ++ 
Sbjct: 33  NGGLALGIKCSDGVVLGVEKLLPFKMLVPGSN-RRIAPVDRHAGMAG-AGLAPDARQIMS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLR--------NLEAMILIADKTITLVITGMG 125
           R   +   Y +             RM  YL               ++             
Sbjct: 91  RARSECANYKSFYGDKIPSKILADRMANYLHMFTLYWSVRPFGAAVLLAVRDPATGKYEL 150

Query: 126 DVLEPENGV-----MAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +LEP         MAIG G   A +    L   + S  E  ++A  I
Sbjct: 151 YLLEPSGECQRYHGMAIGKGRQAAKNEVEKLKLGEMSCLEAVKEAARI 198


>gi|71023807|ref|XP_762133.1| hypothetical protein UM05986.1 [Ustilago maydis 521]
 gi|46101725|gb|EAK86958.1| hypothetical protein UM05986.1 [Ustilago maydis 521]
          Length = 250

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 53/163 (32%), Gaps = 19/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
            +  + +     VV+  + +V   + +  ++  K+  + +    A  +G +ADA T++E 
Sbjct: 34  GSATVGIATKEGVVLGVEKRV-QSKLLESSSIEKIMEVDQHLG-AAMSGLTADARTMIEH 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRM-------------DKYLRNLEAMILIA--DKTI 117
            R+  +   +          + +                     R     +LIA  D+  
Sbjct: 92  ARVTSQNHAFTYDEEIKVESVTQAVCDLALRFGESTAGDEAMMSRPFGVALLIAGIDEKG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +  +       + +E
Sbjct: 152 PQLFHADPSGTFVRYDAKAIGSGSEGAQTELQDKYRKDMTLKE 194


>gi|332213470|ref|XP_003255848.1| PREDICTED: proteasome subunit alpha type-4-like [Nomascus
           leucogenys]
          Length = 261

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +            +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKHPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|301098063|ref|XP_002898125.1| threonine protease family T01A, putative [Phytophthora infestans
           T30-4]
 gi|262105486|gb|EEY63538.1| threonine protease family T01A, putative [Phytophthora infestans
           T30-4]
          Length = 236

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 60/193 (31%), Gaps = 23/193 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTV-MKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T L +R    VVIA + ++    T+ +  ++ K   +        ++G   D   L+ 
Sbjct: 33  GKTSLGIRCKNGVVIATEKKL---PTILVDEDSHKKIAVLSEPAGIVYSGLGPDYRVLIR 89

Query: 74  RLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
           +  KK + Y  +    +           + +++     +R     IL A  D     +  
Sbjct: 90  KARKKAQTYFQKYKEHAPASILVQEIAAVMQEFTQSGGVRPFGVSILYAGYDDDGPQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTN 177
                        AIG     A +      +     E+    A+         ++     
Sbjct: 150 IDPSGAYFGWKATAIGKDSVSAKTFLERRYNDDLEIEDAIHTALLTLREGFEGEMD---E 206

Query: 178 HNIVLETLKVGDE 190
            NI +  +K   +
Sbjct: 207 TNIEVGIIKEDKK 219


>gi|115728489|ref|XP_784666.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 231

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 19/167 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  L+ R  
Sbjct: 10  TLVGVRGKDLVVLGVEKK-SVAKLQEERTVRKICVLDDH-VCMAFAGLTADARILINRAR 67

Query: 77  KKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVITGM 124
            + + +   +            +A+  +            L              +    
Sbjct: 68  IECQSHRLTVEDPVTVEYITRFMAQLKQRYTQSNGRRPFGLSTLIVGFDYDGSPRLYQTD 127

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                      AIG                    +++   ++A +A+
Sbjct: 128 PAGTYHSWKANAIGRSAKTVREFLEKHYSDEVVESESETVKLAVRAL 174


>gi|30038118|gb|AAP12722.1| pros28.1B [Drosophila americana]
          Length = 176

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 46/148 (31%), Gaps = 14/148 (9%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            + + +R    VV+  + +  +    ++  +RK++++ +      FAG +ADA  L+ R 
Sbjct: 20  GSTVGLRTKECVVLGVEKRA-IDSLQIERTSRKIKKIDQHMA-MTFAGLTADARVLVSRA 77

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKT---ITLVITG 123
           + + + +     R +        + +           R      LI          +   
Sbjct: 78  QVEAQSHRLNFDRPASVEYITRYLARLKQTYTQSVARRPFGVSCLIGGFDEDGRPRLFQT 137

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARAL 151
               +  E      G  G          
Sbjct: 138 DPSGIYYEWSANTTGRLGQTVNEYLEKN 165


>gi|297527575|ref|YP_003669599.1| proteasome endopeptidase complex, alpha subunit [Staphylothermus
           hellenicus DSM 12710]
 gi|297256491|gb|ADI32700.1| proteasome endopeptidase complex, alpha subunit [Staphylothermus
           hellenicus DSM 12710]
          Length = 248

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 13/155 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T L V+     V+  + +  +   +     +KV ++ K    A FAG ++D   L++
Sbjct: 36  RGWTTLGVKGREGAVVVVEKR-KISPLIDDKAVQKVFKIDKHIG-ASFAGIASDGRVLVD 93

Query: 74  RLE--KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM---------ILIADKTITLVIT 122
                  L ++      +   LAK     K      A           +  D     +  
Sbjct: 94  YARQVALLHRFYYDERITVEYLAKQVCDIKQAYTQHAGVRPFGVAIIFVGVDDKGPQLYM 153

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
                       +AIG   S A            S
Sbjct: 154 TEPSGRYLSYYAVAIGEKSSSATEFLEKNYKYDIS 188


>gi|134084730|emb|CAK43387.1| unnamed protein product [Aspergillus niger]
          Length = 274

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++    ++K  A K       ++    AG   D    + 
Sbjct: 33  NGGTAIGIRCKDGVVLAVEKIIT--SKLLKPGANKRIATVDRHVGIVSAGLVPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTITLVITGM 124
           R   +   + +         A   R+  Y         +R      ++        +   
Sbjct: 91  RARDEASSWRSVYKGPIPTSALSNRLGSYVQAYTLYSSVRPFGVTAIVGGWDSEAELAVD 150

Query: 125 G-DVLEPENGV-----MAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSI 168
           G  ++EP          A G G   A +    L  +    S  +  ++A  I
Sbjct: 151 GLYMIEPSGLYWGYYGAATGKGRQAAKAELEKLDLSSGTLSLLDGVKEAARI 202


>gi|213410379|ref|XP_002175959.1| proteasome component C11 [Schizosaccharomyces japonicus yFS275]
 gi|212004006|gb|EEB09666.1| proteasome component C11 [Schizosaccharomyces japonicus yFS275]
          Length = 196

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 43/153 (28%), Gaps = 12/153 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +R    V+ A       G TV+K    K   L   N +  ++G + D     E ++  
Sbjct: 5   LAIRGRDFVLTASSKSAVRGITVLKDEDDKSIALNSHN-LMLYSGEAGDTTNFAEYIKAN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK--TITLVITGMGDV 127
           +  Y  +        A      K L           +  ++   DK      +       
Sbjct: 64  VALYTMRNDLVLGPDATASFTRKQLATSLRSRKPYQVNILLAGYDKGEKKPKLYWMDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                   + G    Y +S          S E+
Sbjct: 124 SCVPVPYASHGYAMFYCMSTFDRYYRPDLSLED 156


>gi|145493784|ref|XP_001432887.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400002|emb|CAK65490.1| unnamed protein product [Paramecium tetraurelia]
          Length = 231

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 54/164 (32%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    VV+  + + S    + +++ +K+  L    I A +AG   D   L +
Sbjct: 27  KGDTAIGIKAKNGVVLVVEKKQSS-ILIEESSVQKIASLTDN-IAATYAGLGPDFRVLSQ 84

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD---------KYLRNLEAMILIA--DKTITLVIT 122
           +  K +++Y  +             +            +R     ILIA  D+    ++ 
Sbjct: 85  QARKLVKKYDLKYQEEIFVQTLSRELAEDVQIATQRGGIRPFGVSILIAGYDEEGPHLVQ 144

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A +      +     E+    A+
Sbjct: 145 LDPSGAYYSWKATAIGKQAKNAKAFLEKRYNADMEIEDAINTAL 188


>gi|50289853|ref|XP_447358.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526668|emb|CAG60295.1| unnamed protein product [Candida glabrata]
          Length = 260

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 21/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + + +    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGVVTSEGVVLGVEKRATS-PLLESDSIEKIVEIDRHVGCAMSGLTADARSMLEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTIT 118
                    Y ++      L +S  +LA         + R+      +  +I   DK   
Sbjct: 93  RVSAVTHNLYYDEDIKIESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGYDKDDG 152

Query: 119 L-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A S  +    +  +   AE++  K + 
Sbjct: 153 YQLFHAEPSGTFYRYNAKAIGSGSEGAQSELQNEWHSSLTLKEAEQLVLKILK 205


>gi|225705408|gb|ACO08550.1| Proteasome subunit alpha type 7 [Oncorhynchus mykiss]
          Length = 251

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+    + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVVKK-SVAKLQEERTVRKICALDDH-VCMVFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR-----------MDKYLRNLEAMILIADKT-ITLVI 121
           R   + + +   +                         +    + A+I+  D      + 
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDCDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +T N + ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEESIATDNESIKLAIKAL 197


>gi|225716624|gb|ACO14158.1| Proteasome subunit alpha type-4 [Esox lucius]
          Length = 261

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTRVE 220


>gi|119114702|ref|XP_319444.3| AGAP010253-PA [Anopheles gambiae str. PEST]
 gi|116118542|gb|EAA13963.4| AGAP010253-PA [Anopheles gambiae str. PEST]
          Length = 275

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 17/162 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++     V+    + S     + +  +K+  +     ++ FAG +ADA  L   
Sbjct: 32  GSATVGLKNKDFAVLIALKRASSE---LSSYQKKIISIDDHLGLS-FAGITADARILSRY 87

Query: 75  LEKKLEQY------PNQLLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L ++   Y         + R    L         R D+    +  +++  D     +   
Sbjct: 88  LRQECLNYKYAYDAFYPVGRLISNLGNKMQVCTQRYDRRPYGVGLLVIGYDDQGPHIYQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIAR 163
                  +   M+IGS    A +     ++T    + +E+ R
Sbjct: 148 CPSANFFDCKAMSIGSRSQSARTYLEKHLATFPDCTKDELIR 189


>gi|195640986|gb|ACG39961.1| proteasome subunit alpha type 2 [Zea mays]
          Length = 235

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V + + +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANDVVIATEKKLPS-ILVDETSVQKIQALTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ +QY           QL+R +  + +++     +R     +LIA  D     +   
Sbjct: 90  SRKQAQQYYRLYKEHIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++    A+          I   +++
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQI---SSN 206

Query: 179 NIVLETLKVGDE 190
           NI +  ++   E
Sbjct: 207 NIEIGIIRADRE 218


>gi|156844179|ref|XP_001645153.1| hypothetical protein Kpol_1062p2 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115811|gb|EDO17295.1| hypothetical protein Kpol_1062p2 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 260

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 48/163 (29%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     VV+  + + +    +   +  K+  +      A  G    +       
Sbjct: 34  GSTAIGITTREGVVLGVEKRATS-PLLESDSIEKIVEIDNHIGCAMSGLTADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTIT 118
                    Y ++      L +S  +LA         + R+      +  +I   D+   
Sbjct: 93  RTSAVTHNLYYDEDISVETLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGYDRDQG 152

Query: 119 L-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A S  +    +  + +E
Sbjct: 153 YQLYHAEPSGTFYRYNAKAIGSGSEGAQSELQNEWHSSLTLKE 195


>gi|118376618|ref|XP_001021490.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|89303257|gb|EAS01245.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 191

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 10/158 (6%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK- 78
            +     V++A D  V+     +K    K+  L +  ++A     +          +   
Sbjct: 6   GLVGKDFVIVATDCSVAYSILKLKDKEDKISLLDQNKVMALSGEQAYRLQFSDYIAKNIA 65

Query: 79  LEQYPNQLLRSSVELAKDWRMDK-YLRNLEAMILIA-----DKTITLVITGMGDVLEPEN 132
           L +Y N    ++ E A+  R +  Y       ++       D     +          ++
Sbjct: 66  LNKYRNGTEFNTKECAEFVRSELAYGIRNGPFMVNCLIAGFDNNQPQLYWVDYMGTLVKS 125

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
              A G    + LS          + +E   I ++ ++
Sbjct: 126 VKAAHGYAAHFVLSTLDHDYKPNLTLDEGIAIIKRCIN 163


>gi|313225071|emb|CBY20864.1| unnamed protein product [Oikopleura dioica]
          Length = 204

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 41/159 (25%), Gaps = 15/159 (9%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ ++    V++  D Q +    ++                    G   D     E + K
Sbjct: 5   IIGIKGKDFVLVGAD-QTAARSVIVYQQCYDKIYPIAKKTAMAVCGEVGDTNFFQESIAK 63

Query: 78  KLEQYPNQLLRSSVE----------LAKDWRMDK-YLRNLEAMILIADKTITLVITGMGD 126
            +  Y  +                 LA   R  K Y  NL        +    +      
Sbjct: 64  NIALYEMRNGYDMTPNEAACFTRHKLATSLRSRKSYQVNLLVAGYDDIEEKPELHLIDYL 123

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSA---EEIA 162
             + E    A G G  + +S      +        E IA
Sbjct: 124 AADIECPYGAHGYGAMFTMSILDRHYNKDKPPTREEAIA 162


>gi|145477031|ref|XP_001424538.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391603|emb|CAK57140.1| unnamed protein product [Paramecium tetraurelia]
          Length = 231

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 13/164 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + ++    VV+  + + S    + +++ +K+  L      A +AG   D   L +
Sbjct: 27  KGDTAIGIKAKNGVVLVVEKKQSS-ILIEESSVQKIASLTDNIA-ATYAGLGPDFRVLSQ 84

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD---------KYLRNLEAMILIA--DKTITLVIT 122
           +  K +++Y  +             +            +R     ILIA  D+    ++ 
Sbjct: 85  QARKLVKKYDLKYQEEIFVQTLSRELAEDVQIATQRGGIRPFGVSILIAGYDEEGPHLVQ 144

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A +      +     E+    A+
Sbjct: 145 LDPSGAYYSWKATAIGKQAKNAKAFLEKRYNADMEIEDAINTAL 188


>gi|161528319|ref|YP_001582145.1| proteasome subunit alpha [Nitrosopumilus maritimus SCM1]
 gi|160339620|gb|ABX12707.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
          Length = 245

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 38/153 (24%), Gaps = 16/153 (10%)

Query: 14  HATTILTVRKDGVVVIAGD---GQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             T  + V+    +VIA +    ++     + K   +  +      + A      A +  
Sbjct: 33  RGTIAVGVKCKDGIVIAVEEKPRKL----QISKTAQKIFQIDDHVGVAAAGYIPDARSQV 88

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKD-------WRMDKYLRNLEAMILIAD--KTITLVI 121
              R   +  +           +AK        +     +R     +++         + 
Sbjct: 89  DNARFFSQSNKMIYDEPVEVETIAKHLADQSQQYTQYAGVRPFGVALILGGVVGGKPQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
                        +AIGSG              
Sbjct: 149 LTDPSGTYISYDAIAIGSGSDEVTDFLEKTYKN 181


>gi|325117482|emb|CBZ53034.1| Proteasome subunit alpha type-7, related [Neospora caninum
           Liverpool]
          Length = 246

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 59/194 (30%), Gaps = 26/194 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + V    +VV+A + + +  +      ARKV  L +   +A FAG  ADA  L+ 
Sbjct: 28  RGGCAVGVMGKDLVVLAVEKKAAA-RLQEPRTARKVVMLDENLCLA-FAGLHADARVLIN 85

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIAD-KTITLVITGMGD 126
           +   + + Y      +      +  +A+  +   +   +    L           +    
Sbjct: 86  KTRVECQSYRLNTATAPSVDYIAKFIAQVQQKYTHRGGVRPFGLSCLIAGAEHDGSIALY 145

Query: 127 VLEPENGVM-----AIGSGGSYALSAARALMSTQNS---AEEIARKAMS---IAADICVY 175
             EP          A+G              +       A ++A  A+     A      
Sbjct: 146 QTEPSGICAKWKAQAMGKNYKTVQEYLEKNYTPDLDEDAAIQLAISALMEVVEAGHR--- 202

Query: 176 TNHNIVLETLKVGD 189
              +I +  +K   
Sbjct: 203 ---HIEVAVVKKEQ 213


>gi|195147566|ref|XP_002014750.1| GL19338 [Drosophila persimilis]
 gi|194106703|gb|EDW28746.1| GL19338 [Drosophila persimilis]
          Length = 214

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 51/172 (29%), Gaps = 24/172 (13%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T+L ++    V++A D   +    VMK +  K+ +     +I+   G S D     E + 
Sbjct: 3   TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKASDNLLIST-TGESGDTEQFTEFIS 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIADKTITLVITGMGDVLEPEN 132
           K +  Y  +        A      K    YLR+      +      +         E + 
Sbjct: 62  KNIALYKMRNGYDLSPRAAAHFTRKNLADYLRSRTPYQGL-HVCRWVCFRIHQRYDETDG 120

Query: 133 ---------------GVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                               G G  +  S          +   A +I +K +
Sbjct: 121 AELAFIDYLANAKSLNHAGHGYGAMFCSSIYDRYWHPNITQDEAYDIFKKCI 172


>gi|157865570|ref|XP_001681492.1| proteasome alpha 7 subunit [Leishmania major strain Friedlin]
 gi|68124789|emb|CAJ02435.1| putative proteasome alpha 7 subunit [Leishmania major strain
           Friedlin]
          Length = 247

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 62/185 (33%), Gaps = 16/185 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     VVIA + + S  +       RK+ ++     +A FAG SADA  L+ + + +
Sbjct: 33  VGVLGSDCVVIAVEKK-SAVKLQDSRTIRKIYKVDAHIYLA-FAGLSADARVLINKAQLE 90

Query: 79  LEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMGD 126
            +++            L+R    + +        R      +I          +      
Sbjct: 91  CQRFSLNYEDTIDVGMLVRYVAGVQQKSTQSGGSRPFGVATVIGGFNEDGKPHLWKTDPS 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-NIVLETL 185
            +      +AIG      +             +E    A+    ++ V +   NI L  L
Sbjct: 151 GMCSAWRAVAIGRHDQTVIEYMEKNYKDGMLRDECVHFAIKSLLEV-VESGSRNIELLVL 209

Query: 186 KVGDE 190
           +  +E
Sbjct: 210 QYKEE 214


>gi|255632490|gb|ACU16595.1| unknown [Glycine max]
          Length = 201

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 54/158 (34%), Gaps = 13/158 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ ++    VV+  +  +     +  +N R++  + + + +A  AG +AD   ++ 
Sbjct: 33  NSGTVIGIKCKDGVVLGVEKLIPSKMMLPGSN-RRIHSVHRHSGMA-VAGLAADGRQIVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R + +   Y +             R+  Y+                ++   D+    +  
Sbjct: 91  RAKSEATNYDSVYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDEPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                +       AIG G   A +    L     +  +
Sbjct: 151 VEPSGVSYRYFGAAIGKGRQAAKTEIEKLKLADMTCRQ 188


>gi|229366618|gb|ACQ58289.1| Proteasome subunit alpha type-3 [Anoplopoma fimbria]
          Length = 255

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 41/165 (24%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIAIRCRDGVVFGVEKLVLSKLYEQGSNKRIFNIDRHVGMAVAGLLADARSLSEVA 92

Query: 73  ERLEKKLEQYPNQL--------LRSSVELAKDWRMDKYLRNLEAMILIADKTI-TLVITG 123
                                   +    A              ++   DK     +   
Sbjct: 93  RDEASSFRSSYGHDIPLKHLSDRVAMYVHAYTLYSAVRPFGCSFILGSYDKDDGPQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L   + +  E+ ++   I
Sbjct: 153 DPSGISHGYWGCAIGKAKQAAKTEIEKLQMKEMTCRELVKEVAKI 197


>gi|118482050|gb|ABK92956.1| unknown [Populus trichocarpa]
 gi|118483175|gb|ABK93492.1| unknown [Populus trichocarpa]
          Length = 274

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 18/168 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +     + + ++ +K+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSKTHVVLACVNKA---NSELSSHQKKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y         + R  V+LA        R  K    +  ++   D++   +   
Sbjct: 88  MRTECINYSFNYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGTDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIA 169
                  E    AIGS    A +           +S +++ + A+ IA
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFENFMDSSRDDLIKDAL-IA 194


>gi|325120819|emb|CBZ56374.1| Proteasome subunit alpha type,related [Neospora caninum Liverpool]
          Length = 247

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 26/177 (14%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            T  + +R D  VV+      SL ++V K   + +K+ ++     +A  +G +ADA  + 
Sbjct: 32  GTCCVGLRSDTHVVLC-----SLKRSVSKFAGHHQKLFKIDDHVGVA-MSGITADAKVIS 85

Query: 73  ERLEKKLEQYPNQLLRSS-----------VELAKDWRMDKYLRNLEAMILIADKTITLVI 121
             +  +   +                      A   R  K    +  +    D     + 
Sbjct: 86  NFMRNECFHHKYVYDAPIPVGRLVLMVADKSQANTQRSGKRPFGVGLLAAGFDDAGPHLF 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEI---ARKAMSI--AAD 171
                    E+  MA G+    + +            S EE+   A KA++   AAD
Sbjct: 146 ETCPSGNYFESYAMAFGARSQSSKTYLERNFESFPGLSPEELELHAMKALNASLAAD 202


>gi|322701738|gb|EFY93487.1| proteasome component PUP2 [Metarhizium acridum CQMa 102]
          Length = 208

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 49/157 (31%), Gaps = 19/157 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + V     V++  + +V+    +  ++  K+  + +    A  +G  ADA +++E 
Sbjct: 34  GSTAIGVATSEGVILGVEKRVTS-TLLETSSVEKIVEIDRHIGCA-MSGLQADARSMVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD---------------KYLRNLEAMILIA--DKTI 117
              + + +           +    +                   R     +LIA  D+  
Sbjct: 92  ARVECQSHAFNYNEPLGVESCTQAICDLALRFGEGADGEETIMSRPFGVALLIAGFDEQG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
             +               AIGSG   A +  +     
Sbjct: 152 PQLFHAEPSGTFYRYDAKAIGSGSEGAQAELQNEYHK 188


>gi|225458231|ref|XP_002281948.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 284

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +     + + ++ +K+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSKTHVVLACVNKA---NSELSSHQKKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y         + R  V+LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSECINYSFTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       T   +S E++ + A+
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFGTFQNSSREDLIKDAL 192


>gi|66363126|ref|XP_628529.1| proteasome subunit alpha2, protease of the acylase family and NTN
           hydrolase fold [Cryptosporidium parvum Iowa II]
 gi|46229819|gb|EAK90637.1| proteasome subunit alpha2, protease of the acylase family and NTN
           hydrolase fold [Cryptosporidium parvum Iowa II]
          Length = 283

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 18/163 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L ++    VVIA + +V     V + + RKV  +        FAG  AD   +L++  K 
Sbjct: 83  LGIKARNGVVIATEKKV-ASPLVEEHSIRKVELITSEIGCC-FAGMPADFRVILKKSRKI 140

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITGMGD 126
            + Y N         +L+R    + +++     +R     +L+A         +      
Sbjct: 141 AQVYYNTYREQIPVCELVREIATVMQEFTQSGGVRPFGISLLVAGFDSTRGPQLFQVDPS 200

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                    AIG     A S      +      EI   A+  A
Sbjct: 201 GAYFGWKASAIGKDMQNAKSFLEKRYNPD---VEI-EDALHTA 239


>gi|195174694|ref|XP_002028107.1| GL21346 [Drosophila persimilis]
 gi|194115847|gb|EDW37890.1| GL21346 [Drosophila persimilis]
          Length = 185

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 19/165 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR    VV+  + + S+ +       RK+  L     +A FAG +ADA  L+ R + +
Sbjct: 1   VGVRGGSCVVLGVEKK-SVAKLQEDRTVRKICMLDHHITMA-FAGLTADARILINRAQVE 58

Query: 79  LEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVITGMGD 126
            + +   +          R   +L + +      R      LI          +      
Sbjct: 59  CQSHRLNVEDQVTLEYITRYIAQLKQKYTQSNGRRPFGISCLIGGFDGDGSAHLFQTEPS 118

Query: 127 VLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAM 166
            +  E    A G                    T+  A ++A +A+
Sbjct: 119 GIFYEYKANATGRSAKTVREFFEKNYREEDVVTEKGAVKLAVRAL 163


>gi|115634851|ref|XP_001177076.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit,
          beta type, 1 [Strongylocentrotus purpuratus]
          Length = 62

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
          + +  D   +IA D ++S G ++   ++ K  +L  G ++ G AG   D  TL + L  +
Sbjct: 1  MAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYQLTDGTVL-GCAGFHGDVLTLTKVLTAR 59

Query: 79 LEQ 81
          L+ 
Sbjct: 60 LKM 62


>gi|68303563|ref|NP_001020267.1| proteasome subunit alpha type-7-like isoform 2 [Homo sapiens]
 gi|27503801|gb|AAH42820.1| Proteasome (prosome, macropain) subunit, alpha type, 8 [Homo
           sapiens]
 gi|119621621|gb|EAX01216.1| proteasome (prosome, macropain) subunit, alpha type, 8, isoform
           CRA_c [Homo sapiens]
          Length = 250

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I+ + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                         AIG              +         A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKAL 197


>gi|307106712|gb|EFN54957.1| hypothetical protein CHLNCDRAFT_24020 [Chlorella variabilis]
          Length = 246

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 15/187 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+  + +      V     RK+ ++     +A FAG +ADA  L+ 
Sbjct: 29  KGALAVGVRGTDAIVLGVEKKAVAKLQVA-QTVRKIAQIDDHICLA-FAGLTADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADKTI---TLVI 121
           +   + + +   L   +             + +     +R      LI          + 
Sbjct: 87  KARIEAQSHRLTLDERASVEHMTRYIAGVQQKYTQSGGVRPFGISTLIVGFDPLGRPALY 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
                         AIG              +   S  E  ++A+    ++   ++ NI 
Sbjct: 147 QTDPSGTYSAWKANAIGRNSKTVREYLEKNYAES-SGRETLKQALRALTEVVEGSSKNIE 205

Query: 182 LETLKVG 188
           +  ++  
Sbjct: 206 VAVVEKE 212


>gi|121709868|ref|XP_001272550.1| proteasome subunit alpha type 3, putative [Aspergillus clavatus
           NRRL 1]
 gi|119400700|gb|EAW11124.1| proteasome subunit alpha type 3, putative [Aspergillus clavatus
           NRRL 1]
          Length = 298

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 54/201 (26%), Gaps = 45/201 (22%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  V+    ++K  A +       ++    AG   D    + 
Sbjct: 33  NGGTAIGIRCKDGVVLAVEKIVT--SKLLKPGANRKIATVDRHVGIVSAGLVPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTI------- 117
           R   +   + N         A   R+  Y         +R      ++            
Sbjct: 91  RARDEASSWRNVYKGPIPVSALANRLGSYVQAYTLYSSVRPFGVTAIVGGWDSEAELAVD 150

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                                   +       L       A G G   A +    L    
Sbjct: 151 GQVGNGPVSGSGGKVEGAKTGGPGLYMIEPSGLYWGYYGAATGKGRQAAKAELEKL---D 207

Query: 156 NSAEEIA-RKAMSIAADICVY 175
            ++E +    A+  AA I +Y
Sbjct: 208 LASENLTLLDAIKEAARI-IY 227


>gi|19173680|ref|NP_597483.1| 26S PROTEASOME ZETA CHAIN [Encephalitozoon cuniculi GB-M1]
 gi|74664203|sp|Q8SRU3|PSA5_ENCCU RecName: Full=Probable proteasome subunit alpha type-5; AltName:
           Full=26S proteasome alpha-type subunit PUP2; AltName:
           Full=Multicatalytic endopeptidase complex subunit PUP2
 gi|19170886|emb|CAD26660.1| 26S PROTEASOME ZETA CHAIN [Encephalitozoon cuniculi GB-M1]
          Length = 232

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 46/157 (29%), Gaps = 21/157 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQV--SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            TT + VR    V++  + ++  +L       +  K  ++    ++ GF+G S D  T++
Sbjct: 30  GTTTIGVRTKEFVILCSEKKILSTLQN---PKSVVKHYKIYDHIVL-GFSGISGDTKTIV 85

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE---------------AMILIADKTI 117
           +R       + +    +         +                       ++I+    T 
Sbjct: 86  KRSRDFCISHTHMYGENISVERLLKYLSSLSLRFGEEDEAKMIFRRPFGVSLIIAGFDTE 145

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
             + +             AIGSG              
Sbjct: 146 PRLYSLDPSGSYISYKAKAIGSGHEVVEGILENEYEE 182


>gi|147901578|ref|NP_001083774.1| proteasome subunit alpha type-7-B [Xenopus laevis]
 gi|12229929|sp|Q9PVQ1|PSA7B_XENLA RecName: Full=Proteasome subunit alpha type-7-B; AltName:
           Full=Proteasome subunit alpha 4-B
 gi|6463727|dbj|BAA86956.1| 20S proteasome alpha 4 subunit [Xenopus laevis]
 gi|49522772|gb|AAH74225.1| Psma7 protein [Xenopus laevis]
          Length = 247

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 52/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKEIVVLGVEKK-SVAKLQDERTVRKICALDEN-VFMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKAL 195


>gi|242247555|ref|NP_001156106.1| proteasome subunit alpha type-3-like [Acyrthosiphon pisum]
 gi|239789747|dbj|BAH71476.1| ACYPI002276 [Acyrthosiphon pisum]
          Length = 253

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 51/167 (30%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + +R    VV A +  V+          +++  +     +A   G +ADA  +L+
Sbjct: 33  NSGTAIALRGSDGVVFAVEKLVTSKLH-EDCTGKRLFSVEDHIGMA-VGGLTADASAILD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------------ILIADKTITLVI 121
              ++   Y             + R+  Y+                       K    + 
Sbjct: 91  VAREEARSYRQNYSMPISLKYLNERVSMYIHAHTLYSAIRPFGCAVIIGSYDPKDGPQMY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L     + +E+ ++A  I
Sbjct: 151 MIDPAGVSFGYFGCAIGKAKQTAKTEIEKLNLKTMTCKELIKEAAKI 197


>gi|149047100|gb|EDL99820.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
           [Rattus norvegicus]
 gi|149047101|gb|EDL99821.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
           [Rattus norvegicus]
          Length = 140

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 35/128 (27%), Gaps = 18/128 (14%)

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-----DKTITL-VITGMGDVLEPEN 132
           + ++ N    ++  +A       Y R      +       D+     V +         +
Sbjct: 1   MYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRD 60

Query: 133 GVMAIGSGGSYALSAARALMSTQNS------------AEEIARKAMSIAADICVYTNHNI 180
              A GS  +         +  +N             A  + +     AA+  VYT   +
Sbjct: 61  SFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGDAL 120

Query: 181 VLETLKVG 188
            +  +   
Sbjct: 121 RICIVTKE 128


>gi|322371731|ref|ZP_08046274.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
 gi|320548616|gb|EFW90287.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
          Length = 252

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 63/191 (32%), Gaps = 17/191 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +  + VR +G VV+A D   +    + + +  K+ +      IA  AG  ADA  L++
Sbjct: 35  RGSASIGVRTEGGVVLAVDK-HTRSPLMEQTSVEKLHKADDHIGIA-SAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVIT 122
              ++ +    +         L +   +  + +      R     ++I         +  
Sbjct: 93  FARRQSQINRLRYGEPIGVETLTKEVTDHIQQYTQVGGARPFGVALIIGGIENGEPRLYE 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHN 179
                   E   +A+G+          +  S     +   ++A   +    D    +   
Sbjct: 153 TDPSGTPYEWKALAVGADRGEIQDYLESNYSEGMDLDGGIDLALSGLGTVND-DQLSADG 211

Query: 180 IVLETLKVGDE 190
           + L T+ V  E
Sbjct: 212 VGLATVDVESE 222


>gi|45360795|ref|NP_989071.1| proteasome alpha 7 subunit [Xenopus (Silurana) tropicalis]
 gi|148222470|ref|NP_001081054.1| proteasome subunit alpha type-7-A [Xenopus laevis]
 gi|12229930|sp|Q9PVY6|PSA7A_XENLA RecName: Full=Proteasome subunit alpha type-7-A; AltName:
           Full=Proteasome subunit alpha 4-A
 gi|6467124|dbj|BAA86962.1| 20S proteasome alpha 4 subunit [Xenopus laevis]
 gi|38174032|gb|AAH61282.1| proteasome (prosome, macropain) subunit, alpha type 7 [Xenopus
           (Silurana) tropicalis]
 gi|54035100|gb|AAH84072.1| Psma4-B protein [Xenopus laevis]
 gi|89268296|emb|CAJ83094.1| proteasome (prosome macropain) subunit alpha type7 [Xenopus
           (Silurana) tropicalis]
          Length = 248

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 52/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKEIVVLGVEKK-SVAKLQDERTVRKICALDEN-VFMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKAL 195


>gi|307186251|gb|EFN71914.1| Proteasome subunit alpha type-4 [Camponotus floridanus]
          Length = 490

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  +++  + + +         + K+ +L    +    AG ++DA  L  
Sbjct: 263 HAGTCLGILANDGILLVAEKRNTNKLLDEVFFSEKIYKLNDDIV-CSVAGITSDANVLTN 321

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q   +            + + +      R     IL           + 
Sbjct: 322 ELRLIAQRYLLQYGEAIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLY 381

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                          IG+  + A+S+ +       +     + AM++A
Sbjct: 382 QSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKEGETTL---KDAMALA 426


>gi|226371998|gb|ACO51624.1| Proteasome subunit alpha type-7-A [Rana catesbeiana]
          Length = 248

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 52/170 (30%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGKEIVVLGVEKK-SVAKLQDERTVRKICALDEN-VFMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 86  RARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGSDFDGTPRLY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG G                  T +   ++  KA+
Sbjct: 146 QTDPSGTYHAWKANAIGRGAKSVREFLEKHYTEEAIETDDLTIKLVIKAL 195


>gi|21593040|gb|AAM64989.1| multicatalytic endopeptidase complex alpha chain [Arabidopsis
           thaliana]
          Length = 250

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+A + + +        +ARK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLAVEKKSTPKLQ-DSRSARKIVSLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   L               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNH 178
                          A G   +                   ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAGQETVKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   +
Sbjct: 203 KNIEVAVMTREE 214


>gi|170085845|ref|XP_001874146.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
 gi|164651698|gb|EDR15938.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
          Length = 242

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 19/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
            +T + +R    VV+  + +V     +  ++  K+  +      A  +G +ADA T+++ 
Sbjct: 34  GSTTVGIRTPAGVVLGVEKRV-QSPLLEASSIEKIMEIDSHLGCA-MSGLTADARTMIDH 91

Query: 74  -RLEKKLEQYPNQLLRSSVELAKDWRM-------------DKYLRNLEAMILIA--DKTI 117
            R+  +   +          + +                     R     +LIA  D+  
Sbjct: 92  ARVTAQNHAFTYDEKIKVESVTQAVCDLALRFGESVHDEEAMMSRPFGVALLIAGIDELG 151

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A    +     Q + +E
Sbjct: 152 PQLYHTDPSGTFVRYEAKAIGSGSEAAQQELQDKCHKQMTLKE 194


>gi|190899780|gb|ACE98403.1| 20S proteasome [Populus tremula]
 gi|190899782|gb|ACE98404.1| 20S proteasome [Populus tremula]
 gi|190899784|gb|ACE98405.1| 20S proteasome [Populus tremula]
 gi|190899786|gb|ACE98406.1| 20S proteasome [Populus tremula]
 gi|190899788|gb|ACE98407.1| 20S proteasome [Populus tremula]
 gi|190899790|gb|ACE98408.1| 20S proteasome [Populus tremula]
 gi|190899792|gb|ACE98409.1| 20S proteasome [Populus tremula]
 gi|190899794|gb|ACE98410.1| 20S proteasome [Populus tremula]
 gi|190899796|gb|ACE98411.1| 20S proteasome [Populus tremula]
 gi|190899798|gb|ACE98412.1| 20S proteasome [Populus tremula]
 gi|190899800|gb|ACE98413.1| 20S proteasome [Populus tremula]
 gi|190899802|gb|ACE98414.1| 20S proteasome [Populus tremula]
 gi|190899804|gb|ACE98415.1| 20S proteasome [Populus tremula]
 gi|190899806|gb|ACE98416.1| 20S proteasome [Populus tremula]
 gi|190899808|gb|ACE98417.1| 20S proteasome [Populus tremula]
 gi|190899810|gb|ACE98418.1| 20S proteasome [Populus tremula]
 gi|190899812|gb|ACE98419.1| 20S proteasome [Populus tremula]
 gi|190899814|gb|ACE98420.1| 20S proteasome [Populus tremula]
 gi|190899816|gb|ACE98421.1| 20S proteasome [Populus tremula]
 gi|190899818|gb|ACE98422.1| 20S proteasome [Populus tremula]
 gi|190899820|gb|ACE98423.1| 20S proteasome [Populus tremula]
 gi|190899822|gb|ACE98424.1| 20S proteasome [Populus tremula]
 gi|190899824|gb|ACE98425.1| 20S proteasome [Populus tremula]
 gi|190899826|gb|ACE98426.1| 20S proteasome [Populus tremula]
 gi|190899828|gb|ACE98427.1| 20S proteasome [Populus tremula]
 gi|190899830|gb|ACE98428.1| 20S proteasome [Populus tremula]
 gi|190899832|gb|ACE98429.1| 20S proteasome [Populus tremula]
 gi|190899834|gb|ACE98430.1| 20S proteasome [Populus tremula]
 gi|190899836|gb|ACE98431.1| 20S proteasome [Populus tremula]
 gi|190899838|gb|ACE98432.1| 20S proteasome [Populus tremula]
          Length = 168

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 13/155 (8%)

Query: 26  VVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTLLERLEKKLEQYP 83
            VV+ G+ +V+        +  K+ ++       +AG    +         ++ +   + 
Sbjct: 1   GVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVAVAVAGIMSDANILINTAR-IQAQRYTFA 59

Query: 84  NQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VITGMGDVLEPENG 133
            Q      +L +     K        LR      L A         +             
Sbjct: 60  YQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYSGWK 119

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             AIG+    A S  +     + + EE  + A+ +
Sbjct: 120 AGAIGANNQAAQSMLKQDYKDEITREEAVQLALKV 154


>gi|255074219|ref|XP_002500784.1| predicted protein [Micromonas sp. RCC299]
 gi|226516047|gb|ACO62042.1| predicted protein [Micromonas sp. RCC299]
          Length = 235

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L +R    VV+A + ++     V +    K+ +L    I   ++G   D   L ++
Sbjct: 32  GATSLGIRAVNGVVLATEKKLPS-TLVDETTVEKIAQLTP-EIGMTYSGMGPDFRVLTKK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ + Y           Q++R +  + +++     +R     +L+A  D     +   
Sbjct: 90  TRKETQVYYRTYHELVPCSQIVRETASVMQEFTQRGGVRPFGVSLLMAGFDSNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG     A +      S     E+    A+
Sbjct: 150 DPSGTYFAWKASAIGKNMVNAKTFLEKRYSEDMELEDAIHTAI 192


>gi|15230435|ref|NP_190694.1| PAD1 (20s proteasome alpha subunit pad1); endopeptidase/ peptidase/
           threonine-type endopeptidase [Arabidopsis thaliana]
 gi|266839|sp|P30186|PSA7A_ARATH RecName: Full=Proteasome subunit alpha type-7-A; AltName: Full=20S
           proteasome alpha subunit D-1; AltName: Full=Proteasome
           component 6A; AltName: Full=Proteasome subunit alpha
           type-4; AltName: Full=TAS-G64
 gi|16445|emb|CAA47298.1| proteosome alpha subunit [Arabidopsis thaliana]
 gi|3421080|gb|AAC32058.1| 20S proteasome subunit PAD1 [Arabidopsis thaliana]
 gi|6562278|emb|CAB62648.1| multicatalytic endopeptidase complex [Arabidopsis thaliana]
 gi|14596065|gb|AAK68760.1| multicatalytic endopeptidase complex [Arabidopsis thaliana]
 gi|15450441|gb|AAK96514.1| AT3g51260/F24M12_300 [Arabidopsis thaliana]
 gi|16974445|gb|AAL31226.1| AT3g51260/F24M12_300 [Arabidopsis thaliana]
 gi|20148239|gb|AAM10010.1| multicatalytic endopeptidase complex [Arabidopsis thaliana]
 gi|332645248|gb|AEE78769.1| proteasome subunit alpha type-7-A [Arabidopsis thaliana]
 gi|742351|prf||2009376B proteasome:SUBUNIT=alpha
          Length = 250

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 54/192 (28%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+A + + +        +ARK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLAVEKKSTPKLQ-DSRSARKIVSLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   L               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAMSIAADICVYTNH 178
                          A G   +                   ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAGQETVKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   +
Sbjct: 203 KNIEVAVMTREE 214


>gi|310794363|gb|EFQ29824.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 203

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 38/150 (25%), Gaps = 12/150 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G TV+K +A    R      +  ++G S D     + ++  
Sbjct: 5   LGITGKDFTIIAASKAAMRGATVLK-SADDKTRALNKQTLIAYSGESGDTVQFADYIQAN 63

Query: 79  LEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIAD--KTITLVITGMGDV 127
            + Y  +                        +   N+  ++   D       +       
Sbjct: 64  SQLYSMRNETDLSPSGLANFVRGELASSLRSRKPYNVNLLLGGVDPITQKPALYWLDYLA 123

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS 157
                   A G    Y LS          +
Sbjct: 124 SLAPLPYAAHGYAQYYCLSILDKHHHPDIT 153


>gi|71021385|ref|XP_760923.1| hypothetical protein UM04776.1 [Ustilago maydis 521]
 gi|46100874|gb|EAK86107.1| hypothetical protein UM04776.1 [Ustilago maydis 521]
          Length = 250

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T + ++    VV+A +  V     V  +N R++  +     I   AG  AD   L  
Sbjct: 33  NAGTAIAIKTKTGVVVAVEKLVQSKLLVPGSN-RRIFNVAPHIGIV-SAGLIADGKHLAT 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------EAMILIA------DKTITLVI 121
           R   +   + +     +       R+  Y++            + A      D     + 
Sbjct: 91  RARSEAVSHLDNYRFPAPVKTLADRVAYYVQAYTLYSSVRPFGVSAIIAGLDDSKGPQIY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       A+G G   A +    L     + +E   +A  I
Sbjct: 151 MIEPSGVFWGYNGCAVGKGRQSAKTEIEKLDLDNLTQKEAVEEAAKI 197


>gi|190899840|gb|ACE98433.1| 20S proteasome [Populus tremula]
 gi|190899842|gb|ACE98434.1| 20S proteasome [Populus tremula]
 gi|190899844|gb|ACE98435.1| 20S proteasome [Populus tremula]
 gi|190899846|gb|ACE98436.1| 20S proteasome [Populus tremula]
 gi|190899848|gb|ACE98437.1| 20S proteasome [Populus tremula]
 gi|190899850|gb|ACE98438.1| 20S proteasome [Populus tremula]
 gi|190899852|gb|ACE98439.1| 20S proteasome [Populus tremula]
 gi|190899854|gb|ACE98440.1| 20S proteasome [Populus tremula]
          Length = 168

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 46/155 (29%), Gaps = 13/155 (8%)

Query: 26  VVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERLEKKLEQYP 83
            VV+ G+ +V+        +  K+ ++       +AG    +         ++ +   + 
Sbjct: 1   GVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVAGAVAGIMSDANILINTAR-IQAQRYTFA 59

Query: 84  NQLLRSSVELAKDWRMDK-------YLRNLEAMILIADKTITL---VITGMGDVLEPENG 133
            Q      +L +     K        LR      L A         +             
Sbjct: 60  YQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYSGWK 119

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             AIG+    A S  +     + + EE  + A+ +
Sbjct: 120 AGAIGANNQAAQSMLKQDYKDEITREEAVQLALKV 154


>gi|30266133|gb|AAP21576.1| pros28.1B [Drosophila novamexicana]
          Length = 187

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 46/148 (31%), Gaps = 14/148 (9%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            + + +R    VV+  + +  +    ++  +RK++++ +      FAG +ADA  L+ R 
Sbjct: 20  GSTVGLRTKECVVLGVEKRA-IDSLQIERTSRKIKKIDQHMA-MTFAGLTADARVLVSRA 77

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKT---ITLVITG 123
           + + + +     R +        + +           R      LI          +   
Sbjct: 78  QVEAQSHRLNFDRPASVEYITRYLARLKQTYTQSVARRPFGVSCLIGGFDEDGRPRLFQT 137

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARAL 151
               +  E      G  G          
Sbjct: 138 DPSGIYYEWSANTTGRLGQTVNEYLEKN 165


>gi|326434929|gb|EGD80499.1| proteasome subunit alpha type [Salpingoeca sp. ATCC 50818]
          Length = 259

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 53/172 (30%), Gaps = 24/172 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK-----ANARKVRRLGKGNIIAGFAGSSADA 68
           +++T++ +R    VV A +       T+          R+V  + +   +A + G   D 
Sbjct: 33  NSSTVIALRGKDGVVFAAE------NTIASKLHEAKTTRRVATIDRHIGLA-YCGFVTDG 85

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-----------NLEAMILIAD-KT 116
            ++         ++ +           +  +  Y                 ++   D   
Sbjct: 86  RSVANEARSYATRFRDLYGHPMPVSKLNDELSGYFHMLTLYGAARPCGCSVLLGAYDAAK 145

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +       +       A+G     A +    L  ++ + +E+ ++A  I
Sbjct: 146 GPQMYMIEPSGVSWGYYGCALGKNKQPAHAEIEKLKLSEMTCKELVKEAARI 197


>gi|308484494|ref|XP_003104447.1| hypothetical protein CRE_22877 [Caenorhabditis remanei]
 gi|308258095|gb|EFP02048.1| hypothetical protein CRE_22877 [Caenorhabditis remanei]
          Length = 239

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 51/175 (29%), Gaps = 19/175 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE-RL 75
           T + V+   V VIA   +V     V+  +   + ++ K              F +   R 
Sbjct: 33  TAVAVKGKDVAVIAVQKRV-PDSLVISDSVSSIYQISKTIACCVIGIVPDAKFQVKRARY 91

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA----------MILIADKTITLVITGMG 125
           E    +Y N        LAK            A           I   D+    V     
Sbjct: 92  EAAHFKYANGYDMPVDLLAKKVADLNQYYTQNAEMRCLGIGIIFISFDDEKGPEVYRIDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARA------LMSTQNSAEEIARKAMSIAADICV 174
                    ++IG     A +          L  T + A EIA +++  A  I V
Sbjct: 152 AGYYRGMRAVSIGVKQGPATTCLEKKIKKKELWDTTHPA-EIAIESLQTALGIDV 205


>gi|302780099|ref|XP_002971824.1| hypothetical protein SELMODRAFT_270930 [Selaginella moellendorffii]
 gi|302781148|ref|XP_002972348.1| hypothetical protein SELMODRAFT_270972 [Selaginella moellendorffii]
 gi|300159815|gb|EFJ26434.1| hypothetical protein SELMODRAFT_270972 [Selaginella moellendorffii]
 gi|300160123|gb|EFJ26741.1| hypothetical protein SELMODRAFT_270930 [Selaginella moellendorffii]
          Length = 250

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 13/160 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + V     VV+  +        V  +N +++  + +   +A  AG +AD   ++ 
Sbjct: 33  NSGTAIGVTCKDGVVLGIEKLTPSKMLVEGSN-KRIHHVHEHAGMA-VAGLAADGRQVVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTITLVIT 122
           R   + + Y +             R+  Y+                ++   D+    +  
Sbjct: 91  RARAEAKNYLSFYGEEIPTSHLCERVASYVHLCTLYWWLRPFGTGVILGGYDRDGPQLYM 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
                +       AIG G   A +    L  ++ + +E  
Sbjct: 151 IEPSGVSYRYFGAAIGKGRQAAKTEIEKLKLSEMTCKEAV 190


>gi|225704688|gb|ACO08190.1| Proteasome subunit alpha type 7 [Oncorhynchus mykiss]
          Length = 251

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 61/194 (31%), Gaps = 24/194 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A            + 
Sbjct: 88  RARVECQSHRLTVENPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDYDGTPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARAL-----MSTQNSAEEIARKAMSIAADICVYT 176
                         AIG                  ++T N A + A KA+       V +
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNNTDEAIATDNEAIKPAIKALLEV----VQS 203

Query: 177 NH-NIVLETLKVGD 189
              NI L  ++   
Sbjct: 204 GGKNIDLAVIRRNQ 217


>gi|294953367|ref|XP_002787728.1| proteasome subunit alpha type 5-2, putative [Perkinsus marinus ATCC
           50983]
 gi|239902752|gb|EER19524.1| proteasome subunit alpha type 5-2, putative [Perkinsus marinus ATCC
           50983]
          Length = 237

 Score = 46.9 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 56/180 (31%), Gaps = 29/180 (16%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+A + ++     +  ++  K+ ++    +    +G +ADA TL++ 
Sbjct: 35  GSTAIGITTKEGVVLAVEKRIGS-PLIEPSSIEKIMQIAPH-VGCAMSGLTADARTLVDH 92

Query: 75  LEKKLEQYPNQLLRSS---------VELAKDWRMDK------------YLRNLEAMILIA 113
              +   +                  ++A D+                  R     +L+A
Sbjct: 93  ARVEALNHDFTYNEPMQVESIVHSISDMALDFSRSDDKKKKGDKKKKTMSRPFGVALLVA 152

Query: 114 DKTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
                    +          +    AIGS    A S          +   AE++A   + 
Sbjct: 153 GVDSDNGPQLFMADPSGSYTKYRAAAIGSAAEGATSLLLEQFKESMTLKEAEDLALVVLR 212


>gi|224051902|ref|XP_002200417.1| PREDICTED: proteasome (prosome, macropain) subunit, alpha type, 3
           [Taeniopygia guttata]
          Length = 311

 Score = 46.9 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 89  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 146

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTIT-LVI 121
              ++   + +             R+  Y+                M+   D      + 
Sbjct: 147 IAREEASNFRSNYGYDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYDSDDGAQLY 206

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 207 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 253


>gi|256083548|ref|XP_002578004.1| proteasome subunit alpha 2 (T01 family) [Schistosoma mansoni]
 gi|238663351|emb|CAZ34242.1| proteasome subunit alpha 2 (T01 family) [Schistosoma mansoni]
          Length = 235

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/159 (11%), Positives = 44/159 (27%), Gaps = 11/159 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL-GKGNIIAGFAGSSADAFTLLERLEK 77
           + +R    VV+A   + +          +  +   G G + +G +           +  +
Sbjct: 35  VGIRAANGVVLAAVKKFTSKLMDESTVTKIEQVTKGIGMVYSGLSPDYRVLVKQARKSSQ 94

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA----DKTITLVITGMGDV 127
             +          QL+     + +++     +R     +L+A    D     +       
Sbjct: 95  AYQLAYGEPISPEQLVIRIAAVMQEYTQSGGVRPFGVSLLVAGWDRDLQRPFLYQCDPSG 154

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       S      +     E+    A+
Sbjct: 155 TYFPWKATALGQNSQNGKSFLEKRYNENLELEDATHAAI 193


>gi|154334143|ref|XP_001563323.1| proteasome alpha 3 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134060339|emb|CAM37500.1| putative proteasome alpha 3 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 285

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 54/173 (31%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQV------SLGQTVMKANARKVRRLGKGNII--AGFAGSSA 66
           A T++ V   G VV+AG+  V      S        +  K+ ++ +      AG    + 
Sbjct: 31  AGTVIGVCTKGGVVLAGEKMVPHPLFDSENMQDKNTSGEKMYKIAEHIGCSVAGVTSDAY 90

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTI 117
                   L     QY  Q   +  +L +    +K L              +++  D+  
Sbjct: 91  ALLNYAR-LAAHRHQYTFQEPMAIEDLCRMLCDEKQLYTQYGGVRPYGVSFLLVGWDRYY 149

Query: 118 TL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
              + +             AIG     A S  +       + ++   +A + +
Sbjct: 150 GYQLYSTEPSGDYSAWSAYAIGQNDQVAQSLLKKDWHNDMTLQDGMLLALRVL 202


>gi|198435050|ref|XP_002132083.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit,
           alpha type, 3 isoform 2 [Ciona intestinalis]
          Length = 234

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 13/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV+A +  ++     + +N R        ++    AG   DA  +++
Sbjct: 33  NSSTAIGIRCRDGVVLAVEKLITSKLHELDSNQRIFNI--DKHVGMAVAGLLTDAREIVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
               +   Y  Q            R+  Y+        +     ++++   G        
Sbjct: 91  IARNEASNYRQQYGCPIPLKHLTERVAMYMHAYTLYSSVRPFGASVLLASFGYNG----- 145

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
             A+G     A +    L   + S     R+A++ AA I VY
Sbjct: 146 -CAMGKAKQNAKTEIEKLKLKELS----CREALNEAAKI-VY 181


>gi|2511580|emb|CAA73622.1| multicatalytic endopeptidase [Arabidopsis thaliana]
 gi|2511582|emb|CAA73623.1| multicatalytic endopeptidase [Arabidopsis thaliana]
          Length = 235

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+A + + +        +ARK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLAVEKKSTPKLQ-DSRSARKIVSLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   L               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESSGQETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   +
Sbjct: 203 KNIEVAVMTREE 214


>gi|330835841|ref|YP_004410569.1| proteasome subunit alpha [Metallosphaera cuprina Ar-4]
 gi|329567980|gb|AEB96085.1| proteasome subunit alpha [Metallosphaera cuprina Ar-4]
          Length = 240

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T L V+    VVI G+ +    Q +   +  KV  L    +   FAG ++D   L++
Sbjct: 35  KGWTTLGVKTRNAVVILGEKK-KASQLLDVDSIEKVFLLDDH-VGCSFAGLASDGRILID 92

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
                  Q+          + L +   ++ + +     +R     +++   DK +T +  
Sbjct: 93  YARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVDKGVTKLFM 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
                       +AIG GG  A            + E+   +A  A+  
Sbjct: 153 TEPSGQFMPYQAVAIGQGGYNATDYLEKNYKEDLTVEDTILLALNALKA 201


>gi|6323547|ref|NP_013618.1| Pre8p [Saccharomyces cerevisiae S288c]
 gi|130880|sp|P23639|PSA2_YEAST RecName: Full=Proteasome component Y7; AltName: Full=Macropain
           subunit Y7; AltName: Full=Multicatalytic endopeptidase
           complex subunit Y7; AltName: Full=Proteinase YSCE
           subunit 7
 gi|3114270|pdb|1RYP|B Chain B, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114284|pdb|1RYP|P Chain P, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513413|pdb|1G65|A Chain A, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513427|pdb|1G65|O Chain O, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513992|pdb|1G0U|A Chain A, A Gated Channel Into The Proteasome Core Particle
 gi|11514006|pdb|1G0U|O Chain O, A Gated Channel Into The Proteasome Core Particle
 gi|14488806|pdb|1FNT|B Chain B, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488820|pdb|1FNT|P Chain P, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|20150377|pdb|1JD2|A Chain A, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150398|pdb|1JD2|V Chain V, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|75765700|pdb|1Z7Q|B Chain B, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765714|pdb|1Z7Q|P Chain P, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|93279368|pdb|2F16|A Chain A, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279382|pdb|2F16|O Chain O, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279656|pdb|2FNY|A Chain A, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279670|pdb|2FNY|O Chain O, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032202|pdb|2FAK|A Chain A, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032216|pdb|2FAK|O Chain O, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490843|pdb|2GPL|A Chain A, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490857|pdb|2GPL|O Chain O, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|178847460|pdb|2ZCY|A Chain A, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847474|pdb|2ZCY|O Chain O, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847502|pdb|3BDM|A Chain A, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847516|pdb|3BDM|O Chain O, Yeast 20s Proteasome:glidobactin A-Complex
 gi|190016367|pdb|3D29|A Chain A, Proteasome Inhibition By Fellutamide B
 gi|190016381|pdb|3D29|O Chain O, Proteasome Inhibition By Fellutamide B
 gi|197725321|pdb|3E47|A Chain A, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725335|pdb|3E47|O Chain O, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939212|pdb|3DY3|A Chain A, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939226|pdb|3DY3|O Chain O, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939240|pdb|3DY4|A Chain A, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939254|pdb|3DY4|O Chain O, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828237|pdb|3GPJ|A Chain A, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828251|pdb|3GPJ|O Chain O, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588321|pdb|3GPT|A Chain A, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588335|pdb|3GPT|O Chain O, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588349|pdb|3GPW|A Chain A, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588363|pdb|3GPW|O Chain O, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588543|pdb|3HYE|A Chain A, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588557|pdb|3HYE|O Chain O, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|323462936|pdb|3NZJ|A Chain A, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462950|pdb|3NZJ|O Chain O, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462964|pdb|3NZW|A Chain A, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462978|pdb|3NZW|O Chain O, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462992|pdb|3NZX|A Chain A, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463006|pdb|3NZX|O Chain O, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|330689381|pdb|3MG4|A Chain A, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689395|pdb|3MG4|O Chain O, Structure Of Yeast 20s Proteasome With Compound 1
 gi|506482|emb|CAA40055.1| proteasome Y7 subunit [Saccharomyces cerevisiae]
 gi|575711|emb|CAA86646.1| proteasome component Y [Saccharomyces cerevisiae]
 gi|45269415|gb|AAS56088.1| YML092C [Saccharomyces cerevisiae]
 gi|190408154|gb|EDV11419.1| proteasome component Y7 [Saccharomyces cerevisiae RM11-1a]
 gi|207342584|gb|EDZ70309.1| YML092Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256270019|gb|EEU05265.1| Pre8p [Saccharomyces cerevisiae JAY291]
 gi|259148484|emb|CAY81729.1| Pre8p [Saccharomyces cerevisiae EC1118]
 gi|285813912|tpg|DAA09807.1| TPA: Pre8p [Saccharomyces cerevisiae S288c]
 gi|323303695|gb|EGA57482.1| Pre8p [Saccharomyces cerevisiae FostersB]
 gi|323307804|gb|EGA61066.1| Pre8p [Saccharomyces cerevisiae FostersO]
 gi|323352943|gb|EGA85243.1| Pre8p [Saccharomyces cerevisiae VL3]
          Length = 250

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 44/167 (26%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + + S     M     KV  L                  + + 
Sbjct: 31  GVTSLGIKATNGVVIATEKK-SSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKS 89

Query: 75  LEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
            +     Y                  ++ ++      +R     +LIA         +  
Sbjct: 90  RKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                        AIG G   A +      + +   E+    A+ IA
Sbjct: 150 VDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELED----AIHIA 192


>gi|30584117|gb|AAP36307.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 3
           [synthetic construct]
 gi|60653581|gb|AAX29484.1| proteasome alpha type subunit 3 [synthetic construct]
 gi|60653583|gb|AAX29485.1| proteasome alpha type subunit 3 [synthetic construct]
          Length = 249

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITLVITGMGDVL 128
              ++   + +    +        R+  Y+              +      +       +
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSVNDGAQLYMIDPSGV 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  AIG     A +    L   + +  +I ++   I
Sbjct: 151 SYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 190


>gi|195165880|ref|XP_002023766.1| GL27233 [Drosophila persimilis]
 gi|194105926|gb|EDW27969.1| GL27233 [Drosophila persimilis]
          Length = 208

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 53/170 (31%), Gaps = 15/170 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL ++    V+I+ D  V  G  V+     K+ RLG   +IA  AG+  D    +  + 
Sbjct: 3   TILAIKGKDFVLISADTVVGKGLIVLGQGKSKIERLGDFAMIAA-AGNGGDPQRFMSLIA 61

Query: 77  KKLEQYPNQLL------RSSVELAKDWRMD----KYLRNLEAMILIADKTI-TLVITGMG 125
           + +  +  Q        RS    A               + A+I   D      +     
Sbjct: 62  RHMALHRVQHNGQSPSVRSMAHFAGKQIYSSVNANLNFKVSALIAGWDPQAGPQLHQIDE 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADI 172
                       G G     S  +   S       A  + +K ++   + 
Sbjct: 122 FGGLVSVPYSGQGLGLPVFNSIFQKDYSPDIDEPTAYHVLKKCVAAVHER 171


>gi|209735488|gb|ACI68613.1| Proteasome subunit alpha type-4 [Salmo salar]
          Length = 261

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA + L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGSCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWGKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   D
Sbjct: 210 KVEIATLTRED 220


>gi|156101261|ref|XP_001616324.1| 20S proteasome alpha subunit C [Plasmodium vivax SaI-1]
 gi|148805198|gb|EDL46597.1| 20S proteasome alpha subunit C, putative [Plasmodium vivax]
          Length = 246

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 44/154 (28%), Gaps = 11/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERL 75
            + +  +  V++  D            N  K+ ++ K     +AG    +          
Sbjct: 34  TIGIITNEGVILGADKVFISKLIDKANNFEKIYKIDKHIFCGVAGLNADANILINQSRLY 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMGD 126
            ++     N      QL+    ++ + +     LR      LIA    K    +      
Sbjct: 94  TQRYLYNYNDVQPVSQLVVQICDIKQSYTQYGGLRPYGVSFLIAGYDVKEGYQLYHTDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                    AIG+    A S  +       + ++
Sbjct: 154 GNYSGWFATAIGTNNLTASSILKQEWKKDMTLQD 187


>gi|149238844|ref|XP_001525298.1| proteasome component PUP2 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450791|gb|EDK45047.1| proteasome component PUP2 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 255

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 49/170 (28%), Gaps = 16/170 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
            +T + ++    V++  + +V+       +  + V      G  ++G    +        
Sbjct: 34  GSTAIGIQTSEGVILGVEKRVTSSLLESSSIEKIVEIDHHIGCAMSGLTADARSMIDHAR 93

Query: 74  RLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIADKTI---T 118
            L      Y ++      L ++  +LA               R     +LIA        
Sbjct: 94  VLSLTHNLYYDEQIGVESLTQNVCDLALRFGEGASGEKRLMSRPFGVALLIAGVDKQKGP 153

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A +          + +E    A+ I
Sbjct: 154 QLYHAEPSGTFYRYEAKAIGSGSEGAQAELNNEYHKSLTLQEAELLALKI 203


>gi|146081283|ref|XP_001464214.1| proteasome alpha 3 subunit [Leishmania infantum JPCM5]
 gi|134068305|emb|CAM66591.1| putative proteasome alpha 3 subunit [Leishmania infantum JPCM5]
          Length = 285

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQV------SLGQTVMKANARKVRRLGKGNII--AGFAGSSA 66
           A T++ V     VV+AG+  V      S        +  K+ ++ +      AG    + 
Sbjct: 31  AGTVIGVCTKDGVVLAGEKMVPHPLFDSENMQDKNTSGEKMYKIAEHIGCSVAGVTSDAY 90

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTI 117
                   L     QY  Q   +  +L +    +K L              +++  D+  
Sbjct: 91  ALLNYAR-LSALRHQYTFQEPMAIEDLCRILCDEKQLYTQYGGVRPYGVSFLLVGWDRYY 149

Query: 118 TL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
              + +             AIG     A S  +       + E+   +A + +
Sbjct: 150 GYQLYSTEPSGDYSAWSAYAIGQNDQVAHSLLKKDWHENMTLEDGMLLALRVL 202


>gi|298508223|pdb|1VSY|B Chain B, Proteasome Activator Complex
 gi|298508237|pdb|1VSY|P Chain P, Proteasome Activator Complex
 gi|298508439|pdb|3L5Q|G Chain G, Proteasome Activator Complex
 gi|298508453|pdb|3L5Q|S Chain S, Proteasome Activator Complex
          Length = 231

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 44/167 (26%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + + S     M     KV  L                  + + 
Sbjct: 12  GVTSLGIKATNGVVIATEKK-SSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKS 70

Query: 75  LEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
            +     Y                  ++ ++      +R     +LIA         +  
Sbjct: 71  RKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQ 130

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                        AIG G   A +      + +   E+    A+ IA
Sbjct: 131 VDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELED----AIHIA 173


>gi|219128979|ref|XP_002184677.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403786|gb|EEC43736.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 236

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 46/163 (28%), Gaps = 10/163 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQV--SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           +  T L +     VVIA D ++   L  T        +                      
Sbjct: 31  NGRTALGICAKDGVVIATDKKLPSVLVDTAHVHKMETITPTTGFCYSGVGPDYRVLVKRA 90

Query: 72  LERLEKKLEQYPN-----QLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVITG 123
            +  +  +  Y +     QL++S+  + +++     +R     +L+A         +   
Sbjct: 91  RKSSQAYVRMYGDIEPISQLVKSTAGVMQEYTQRGGVRPFGVSLLVAGLDGDGRPGLYQV 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG     A S      S     E+    A+
Sbjct: 151 DPSGAYFGWKATAIGKNFVSAKSFLEKRYSDDMELEDAIHTAL 193


>gi|322497618|emb|CBZ32691.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 285

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQV------SLGQTVMKANARKVRRLGKGNII--AGFAGSSA 66
           A T++ V     VV+AG+  V      S        +  K+ ++ +      AG    + 
Sbjct: 31  AGTVIGVCTKDGVVLAGEKMVPHPLFDSENMQDKNTSGEKMYKIAEHIGCSVAGVTSDAY 90

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTI 117
                   L     QY  Q   +  +L +    +K L              +++  D+  
Sbjct: 91  ALLNYAR-LSALRHQYTFQEPMAIEDLCRILCDEKQLYTQYGGVRPYGVSFLLVGWDRYY 149

Query: 118 TL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
              + +             AIG     A S  +       + E+   +A + +
Sbjct: 150 GYQLYSTEPSGDYSAWSAYAIGQNDQVAHSLLKKDWHENMTLEDGMLLALRVL 202


>gi|46254558|gb|AAS86252.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           melanogaster]
          Length = 249

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+ +       RK+  L +   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSEMQEDRTVRKISMLDRHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
           R + + + +            + R   +L + +      R      LI          + 
Sbjct: 88  RGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                 +  E    A G   +          S         A ++A +A+
Sbjct: 148 HTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRAL 197


>gi|167538768|ref|XP_001751043.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770452|gb|EDQ84148.1| predicted protein [Monosiga brevicollis MX1]
          Length = 120

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 26/104 (25%), Gaps = 14/104 (13%)

Query: 98  RMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA------L 151
           R   Y  N     L A +    V +             A G+  S              L
Sbjct: 6   RFFPYYTNNILAGLDA-EGKGCVYSYDPVGSYEREVFRAAGTASSLLQPLLDNQIGGKNL 64

Query: 152 MSTQNS-------AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            +           A  + +     AA+  +YT   + +  +   
Sbjct: 65  ANQDGPLPLDKERAVRLVKDIFVAAAERDIYTGDAVHIAIITKD 108


>gi|119601128|gb|EAW80722.1| proteasome (prosome, macropain) subunit, alpha type, 3, isoform
           CRA_h [Homo sapiens]
          Length = 221

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 6   NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 63

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITLVITGMGDVL 128
              ++   + +    +        R+  Y+              +      +       +
Sbjct: 64  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSVNDGAQLYMIDPSGV 123

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  AIG     A +    L   + +  +I ++   I
Sbjct: 124 SYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 163


>gi|23110939|ref|NP_687033.1| proteasome subunit alpha type-3 isoform 2 [Homo sapiens]
 gi|109083757|ref|XP_001091058.1| PREDICTED: proteasome subunit alpha type-3 isoform 1 [Macaca
           mulatta]
 gi|114653225|ref|XP_001164584.1| PREDICTED: proteasome subunit alpha type-3 isoform 2 [Pan
           troglodytes]
 gi|296215136|ref|XP_002754002.1| PREDICTED: proteasome subunit alpha type-3-like isoform 1
           [Callithrix jacchus]
 gi|297695197|ref|XP_002824838.1| PREDICTED: proteasome subunit alpha type-3-like isoform 1 [Pongo
           abelii]
 gi|332237186|ref|XP_003267784.1| PREDICTED: proteasome subunit alpha type-3-like isoform 2 [Nomascus
           leucogenys]
 gi|13528948|gb|AAH05265.1| Proteasome (prosome, macropain) subunit, alpha type, 3 [Homo
           sapiens]
 gi|30582261|gb|AAP35357.1| proteasome (prosome, macropain) subunit, alpha type, 3 [Homo
           sapiens]
 gi|61361308|gb|AAX42028.1| proteasome subunit alpha type 3 [synthetic construct]
 gi|61361314|gb|AAX42029.1| proteasome subunit alpha type 3 [synthetic construct]
 gi|119601124|gb|EAW80718.1| proteasome (prosome, macropain) subunit, alpha type, 3, isoform
           CRA_d [Homo sapiens]
          Length = 248

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITLVITGMGDVL 128
              ++   + +    +        R+  Y+              +      +       +
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSVNDGAQLYMIDPSGV 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  AIG     A +    L   + +  +I ++   I
Sbjct: 151 SYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 190


>gi|67623909|ref|XP_668237.1| proteasome subunit alpha type 2 (20S proteasome alpha subunit B)
           (20S proteasome subunit alpha-2) [Cryptosporidium
           hominis TU502]
 gi|54659420|gb|EAL37997.1| proteasome subunit alpha type 2 (20S proteasome alpha subunit B)
           (20S proteasome subunit alpha-2) [Cryptosporidium
           hominis]
          Length = 236

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 18/163 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L ++    VVIA + +V     V + + RKV  +        FAG  AD   +L++  K 
Sbjct: 36  LGIKARNGVVIATEKKV-ASPLVEEHSIRKVELITSEIGCC-FAGMPADFRVILKKSRKI 93

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITGMGD 126
            + Y N         +L+R    + +++     +R     +L+A         +      
Sbjct: 94  AQVYYNTYREQIPVCELVREIATVMQEFTQSGGVRPFGISLLVAGFDSTRGPQLFQVDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                    AIG     A S      +      EI   A+  A
Sbjct: 154 GAYFGWKASAIGKDMQNAKSFLEKRYNPD---VEI-EDALHTA 192


>gi|323347274|gb|EGA81548.1| Pre8p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 250

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 44/167 (26%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + + S     M     KV  L                  + + 
Sbjct: 31  GVTSLGIKATNGVVIATEKK-SSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKS 89

Query: 75  LEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
            +     Y                  ++ ++      +R     +LIA         +  
Sbjct: 90  RKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                        AIG G   A +      + +   E+    A+ IA
Sbjct: 150 VDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELED----AIHIA 192


>gi|195426992|ref|XP_002061564.1| GK20963 [Drosophila willistoni]
 gi|194157649|gb|EDW72550.1| GK20963 [Drosophila willistoni]
          Length = 256

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 47/170 (27%), Gaps = 15/170 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLER 74
            T++ +R    VV+A +  ++       A  R        G  +AG    +     +  +
Sbjct: 35  GTVIGLRGKNGVVLAVEKIITSSLHEPDAGGRIFTIERNIGMAVAGLMADANYIADIARQ 94

Query: 75  LEKKLEQYPNQLLR------SSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITGMG 125
                 Q   + +               + +   +R     +L+A         +     
Sbjct: 95  EAANFRQQFEKPIPLKHLCDRVSGYIHAYTLYSAVRPFGISVLLASWDETDGPQLYKIEP 154

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                     A G     A +        +   E + ++    A +I +Y
Sbjct: 155 SGSSFGYYACASGKAKQQAKTEMEKFKFAEMDTETLVKR----AGEI-IY 199


>gi|47607474|gb|AAT36639.1| light organ C8 alpha proteasome subunit [Euprymna scolopes]
          Length = 255

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 41/164 (25%), Gaps = 9/164 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + +R    VV   +  V        AN R        G+ +AG    +       
Sbjct: 33  NSGTAIGIRGKDGVVFGVEKLVRSKLYETGANKRIFNIDTHIGSAVAGLLADARHVVDTA 92

Query: 73  ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVITGM 124
                              L          + +    R     +++         +    
Sbjct: 93  REEAANYRYNYGGSIPLKYLTNRVSMYVHIYTLSSSTRPFGVSMILGSYEEGLPQLYMID 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +       AIG     A +    L + +    E+ ++   I
Sbjct: 153 PSGVSWGYYGCAIGKAQQTAKTEIEKLKTKEMPITEVVKEVAKI 196


>gi|19173354|ref|NP_597157.1| PROTEASOME BETA-TYPE COMPONENT C7-1 [Encephalitozoon cuniculi
           GB-M1]
 gi|74630115|sp|Q8SRF1|PSB2_ENCCU RecName: Full=Probable proteasome subunit beta type-2; AltName:
           Full=26S proteasome beta-type subunit PRE1; AltName:
           Full=Multicatalytic endopeptidase complex subunit PRE1
 gi|19170943|emb|CAD26333.1| PROTEASOME BETA-TYPE COMPONENT C7-1 [Encephalitozoon cuniculi
           GB-M1]
          Length = 197

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 41/146 (28%), Gaps = 7/146 (4%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++     ++A D ++S    V+K N  K + +    ++A          T+L   E  
Sbjct: 5   IGIKGRNFAIVAADTKISSSILVVKENHEKFQVIKDRIVMAMTGNQGDAFRTMLYVSESA 64

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPE 131
           L +     +  S  +      +K   +L    L               + +         
Sbjct: 65  LYEEIQNGIELSPSVLAHMIQNKVHESLRRRQLDISSIVAGRGPEKYDLWSVDKYGAISS 124

Query: 132 NGVMAIGSGGSYALSAARALMSTQNS 157
               A G    +         S   +
Sbjct: 125 VPFCASGYAAYFVYGILDREYSEDIT 150


>gi|21356137|ref|NP_650910.1| proteasome 28kD subunit 1A [Drosophila melanogaster]
 gi|12643241|sp|Q24178|PSA72_DROME RecName: Full=Proteasome subunit alpha type-7-1A; AltName:
           Full=Testis-specific alpha4-t1 proteasome subunit;
           AltName: Full=Testis-specific proteasome 28 kDa subunit
           1A
 gi|7300653|gb|AAF55802.1| proteasome 28kD subunit 1A [Drosophila melanogaster]
 gi|46254548|gb|AAS86247.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           melanogaster]
 gi|46254550|gb|AAS86248.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           melanogaster]
 gi|46254552|gb|AAS86249.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           melanogaster]
 gi|46254554|gb|AAS86250.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           melanogaster]
 gi|46254556|gb|AAS86251.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           melanogaster]
 gi|46254560|gb|AAS86253.1| testes-specific alpha4-t1 proteasome subunit [Drosophila
           melanogaster]
          Length = 249

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+ +       RK+  L +   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSEMQEDRTVRKISMLDRHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
           R + + + +            + R   +L + +      R      LI          + 
Sbjct: 88  RGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                 +  E    A G   +          S         A ++A +A+
Sbjct: 148 HTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRAL 197


>gi|294654408|ref|XP_456467.2| DEHA2A02860p [Debaryomyces hansenii CBS767]
 gi|199428859|emb|CAG84419.2| DEHA2A02860p [Debaryomyces hansenii]
          Length = 250

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/193 (10%), Positives = 50/193 (25%), Gaps = 20/193 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T + ++    VVIA + + +      ++N +        G   +G             
Sbjct: 31  GVTTIGIKSANGVVIATERKANSNLLKAESNNKVELITPDIGMSYSGMGPDFRVLVDKAR 90

Query: 74  RLEKKLEQYPNQLLRSSVEL-------AKDWRMDKYLRNLEAMILIADKTIT----LVIT 122
           +L     +           +        ++      +R     +L+           +  
Sbjct: 91  KLAHTNYKRIYNEYPPVKVMVQEIAKVMQESTQSGGIRPFGVSLLVGGYDKHSNSFQLYQ 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM-----SIAADICVYTN 177
                        AIG     A +      +     E+    ++     S+  ++   T 
Sbjct: 151 VDPSGSYFPWKATAIGKTSVSAKTFLEKRWNENLELEDAIHVSLLALKESVDGEL---TG 207

Query: 178 HNIVLETLKVGDE 190
            N+ +  +    E
Sbjct: 208 ENLDIAIVSDSQE 220


>gi|308804650|ref|XP_003079637.1| alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri]
 gi|116058093|emb|CAL53282.1| alpha 2 subunit of 20S proteasome (ISS) [Ostreococcus tauri]
          Length = 270

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VV+A + ++     V  +  +K+  L     IA ++G   D   L   
Sbjct: 67  GATSLGIKAVDGVVLATEKKLPS-TLVDASTVKKIATLTDDIGIA-YSGMGPDFRVLTRM 124

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ + Y           QL+R +  + +++     +R     +L+A  D++   +   
Sbjct: 125 ARKETQTYYRTYKESIPVSQLVRETATVMQEFTQQGGVRPFGVSLLMAGYDESGPSLYQV 184

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG     A +      S     E+    A+
Sbjct: 185 DPSGSYFAWKASAIGKNMVNAKTFLEKRYSDDIELEDAIHTAI 227


>gi|151946074|gb|EDN64305.1| proteasome component Y7 [Saccharomyces cerevisiae YJM789]
          Length = 250

 Score = 46.5 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 44/167 (26%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + + S     M     KV  L                  + + 
Sbjct: 31  GVTSLGIKATNGVVIATEKK-SSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKS 89

Query: 75  LEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
            +     Y                  ++ ++      +R     +LIA         +  
Sbjct: 90  RKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                        AIG G   A +      + +   E+    A+ IA
Sbjct: 150 VDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELED----AIHIA 192


>gi|193716044|ref|XP_001950162.1| PREDICTED: proteasome subunit alpha type-3-like [Acyrthosiphon
           pisum]
          Length = 253

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 46/166 (27%), Gaps = 12/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL-- 71
           ++ T + +R    VV A +  V+          +++  +     +A    ++  +  L  
Sbjct: 33  NSGTAIALRGSDGVVFAVEKLVTSKLH-EDCTGKRLFSVENHIGMAVGGLTADSSAILDV 91

Query: 72  --------LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-KTITLVIT 122
                    +     +         S    A              +I   D K    +  
Sbjct: 92  AREEAKAFRQNFRTPISLKYLNERVSMYIHAHTLYSAIRPFGCAVIIGSYDPKEGPQMYM 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG     A +    L     + +E+ ++A  I
Sbjct: 152 IDPAGVSFGYFGCAIGKAKQAAKTEIEKLNMKTMTCKELIKEAAKI 197


>gi|297702409|ref|XP_002828173.1| PREDICTED: proteasome subunit alpha type-7-like isoform 2 [Pongo
           abelii]
          Length = 256

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 53/175 (30%), Gaps = 23/175 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-----IIAGFAGSSADA 68
             +T + +R   +VV+  + + S+ +   +   RK+  L         ++  F G +ADA
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDHVCMAFAVLTIFVGLTADA 88

Query: 69  FTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKT 116
             ++ R   + + +   +            +A   +            + A      D  
Sbjct: 89  RVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDG 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
           I  +               AIG              +         A ++A KA+
Sbjct: 149 IPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKAL 203


>gi|145341042|ref|XP_001415625.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575848|gb|ABO93917.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 258

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 52/168 (30%), Gaps = 18/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  + VR   +VV+  + +            RK++ L     +A FAG +ADA  L+ 
Sbjct: 28  KGTLTVGVRGSDIVVLGVERKAVPKLQDA-RTIRKIQLLDDHIAVA-FAGLTADARILIN 85

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD---KTITLVI 121
           R   + + +   L   +           + + +     +R      LIA    +    + 
Sbjct: 86  RARTECQSHRLTLEDEASVEYITRYIGGVQQKYTQSGGVRPFGLSTLIAGFSPEGKPQLF 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAM 166
                    +    A G                  S EE  +   KA+
Sbjct: 146 HTDPSGTYSQWKANATGRNSKSVREWLEKHYE-DFSGEEAIKFTLKAL 192


>gi|146104172|ref|XP_001469749.1| proteasome alpha 1 subunit [Leishmania infantum]
 gi|134074119|emb|CAM72861.1| putative proteasome alpha 1 subunit [Leishmania infantum JPCM5]
 gi|322503519|emb|CBZ38605.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 264

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 51/168 (30%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +  + V+    VV+A   +  + +    +   KV  + +  +    +G  AD   L  
Sbjct: 31  NGSATVGVKGRDFVVLAALKRSPVAEL--SSYQEKVFEVDEH-VGMSISGLVADGRVLAR 87

Query: 74  RLEKKL--EQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVIT 122
            L  +    +Y         ++A               K    +  ++   D+    +  
Sbjct: 88  FLRTECMNYRYMYSHGMPMNQMADMIGEKHQRHIQFSGKRPFGVGLLLAGYDRQGPHLYQ 147

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
            +      +    A+G     + +         T  + +E+   A+  
Sbjct: 148 TVPSGDVYDYKATAMGVRSQASRTYLEKHFEHFTDCTLDELVAHALKA 195


>gi|326931909|ref|XP_003212066.1| PREDICTED: proteasome subunit alpha type-7-like [Meleagris
           gallopavo]
          Length = 249

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ R   +
Sbjct: 34  VGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVINRARVE 91

Query: 79  LEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVITGMGD 126
            + +   +            +A   +            + A            +      
Sbjct: 92  CQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPS 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                    AIG G                  T +   ++  KA+
Sbjct: 152 GTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 196


>gi|315427138|dbj|BAJ48753.1| proteasome alpha subunit [Candidatus Caldiarchaeum subterraneum]
 gi|315427157|dbj|BAJ48771.1| proteasome alpha subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 244

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 49/164 (29%), Gaps = 12/164 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
            +T L++     VV+A + ++         + +  +     G   AG    +        
Sbjct: 35  GSTALSITCREGVVLAVEERMHTKLQNPDFSWKIFQIDEHIGAAAAGLNSDARVLVDNAR 94

Query: 74  RLEKKLEQYPNQLL------RSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
              + L    ++        R   ++ + +     +R     +LI   DKT   +     
Sbjct: 95  VYAQTLRLSYDEEPLVEAVARRVGDIMQLYTQHAGVRPFGTALLIGGVDKTGPRLFYAEP 154

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
             L  E    AIG G                S   A E+   A+
Sbjct: 155 SGLILEYNAWAIGRGADKVREIFETSYKVDMSLDNAVELGLSAL 198


>gi|303274280|ref|XP_003056462.1| proteasome alpha-4 subunit [Micromonas pusilla CCMP1545]
 gi|226462546|gb|EEH59838.1| proteasome alpha-4 subunit [Micromonas pusilla CCMP1545]
          Length = 247

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 14/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA   + +R D  VV+A + ++          + K+ +L       +AG    +      
Sbjct: 30  HAGAAVGIRTDFGVVLAAEKKILSKLLETSEASEKMFKLDANIAVAVAGINSDANILINS 89

Query: 72  LERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
                ++             L++S  +  + +     LR      L           +  
Sbjct: 90  SRLFAQRYALNYSEQVPVEHLVQSMCDQKQGYTQFGGLRPFGVSFLFGGWDRNFGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
                        A+G+    A S  +       S   A++++ K + 
Sbjct: 150 SDPSGNYSGWKATAVGANSQAAHSILKTEYVEGISLSTAKQLSLKVLK 197


>gi|254166809|ref|ZP_04873663.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|289596400|ref|YP_003483096.1| 20S proteasome A and B subunits [Aciduliprofundum boonei T469]
 gi|197624419|gb|EDY36980.1| peptidase, T1 family [Aciduliprofundum boonei T469]
 gi|289534187|gb|ADD08534.1| 20S proteasome A and B subunits [Aciduliprofundum boonei T469]
          Length = 233

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 1/119 (0%)

Query: 50  RRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM 109
           +    G IIA F+G +AD   ++ ++  K++     LL    ++  ++      R L A 
Sbjct: 104 KIYSNGEIIAAFSGLAADGLYVMSKIR-KMKGEMRTLLFELSKIFWEFTTKMGYRPLGAS 162

Query: 110 ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           +++  K    +               AIG G    +   R       S EE  + A++ 
Sbjct: 163 VMVGFKKEKKIAVFDPSGSYHFANYWAIGDGEKDIMEILRGKYRKDMSKEEALKLALNA 221


>gi|209734746|gb|ACI68242.1| Proteasome subunit beta type-2 [Salmo salar]
          Length = 170

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 11/140 (7%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L    ++    G + D     E ++K 
Sbjct: 5   IGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      K L          ++  ++   D+     +        
Sbjct: 64  IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123

Query: 129 EPENGVMAIGSGGSYALSAA 148
             +    A G G    LS  
Sbjct: 124 LAKAPFAAHGHGAYRTLSIL 143


>gi|114672627|ref|XP_523894.2| PREDICTED: proteasome (prosome, macropain) subunit, alpha type, 8
           isoform 4 [Pan troglodytes]
          Length = 250

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I+ + 
Sbjct: 88  RACVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                         AIG              +         A ++A KA+
Sbjct: 148 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKAL 197


>gi|162605862|ref|XP_001713446.1| 26S proteasome SU [Guillardia theta]
 gi|13794378|gb|AAK39755.1|AF083031_112 26S proteasome SU [Guillardia theta]
          Length = 200

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 56/187 (29%), Gaps = 17/187 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              ++ +     + IA D +  S+         +  +      II G  G   D +   E
Sbjct: 5   GGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHED--IIIGIVGLLGDIYGFKE 62

Query: 74  RLEKKL-----EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMG 125
            LE ++     ++         + L       K        IL+A         + T   
Sbjct: 63  ILEYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTENGKPFLGTVDC 122

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYT--NHN 179
              +   +    IG+         + L       +E   +  K+M +      Y+  N  
Sbjct: 123 IGAISYISNYACIGNLCENIFPLIQFLWRPGMDLKELIILVSKSMKVGNRRNCYSSKNST 182

Query: 180 IVLETLK 186
           +++  +K
Sbjct: 183 VMIYNIK 189


>gi|73963046|ref|XP_864852.1| PREDICTED: similar to proteasome alpha 3 subunit isoform 2 isoform
           8 [Canis familiaris]
          Length = 248

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITLVITGMGDVL 128
              ++   + +    +        R+  Y+              +      +       +
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSVNDGAQLYMIDPSGV 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  AIG     A +    L   + +  +I ++   I
Sbjct: 151 SYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 190


>gi|124027453|ref|YP_001012773.1| proteasome subunit alpha [Hyperthermus butylicus DSM 5456]
 gi|123978147|gb|ABM80428.1| proteasome alpha subunit [Hyperthermus butylicus DSM 5456]
          Length = 243

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 13/157 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T++ VR    VVI  + + +    +      KV  + +    AGF G  +D   L++
Sbjct: 37  RGWTMVGVRARDGVVIVAEKKKTS-PLIDIEQLEKVYMVDEHIG-AGFVGFGSDGRVLID 94

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVIT 122
              +   QY            L R   +L + +     +R     +LI   D +   +  
Sbjct: 95  YARQLAIQYKFIYGEKIPVEYLTRQICDLMQLYTQHGGVRPFGVTLLIVGVDDSGPKLFV 154

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE 159
                         +G GG  A+   +         E
Sbjct: 155 AEPSGQYMSYKAHGLGQGGGQAIEILQREYRDDIDVE 191


>gi|255538698|ref|XP_002510414.1| proteasome subunit alpha type, putative [Ricinus communis]
 gi|223551115|gb|EEF52601.1| proteasome subunit alpha type, putative [Ricinus communis]
          Length = 283

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 18/168 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +     + + ++ +K+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSKTHVVLACVNKA---NSELSSHQKKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y         + R  V+LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSECINYSFTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIA 169
                  E    AIGS    A +           +S +++ + A+ IA
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYMERRFENFMDSSRDDLIKDAL-IA 194


>gi|212543333|ref|XP_002151821.1| proteasome subunit alpha type 3, putative [Penicillium marneffei
           ATCC 18224]
 gi|210066728|gb|EEA20821.1| proteasome subunit alpha type 3, putative [Penicillium marneffei
           ATCC 18224]
          Length = 292

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 44/142 (30%), Gaps = 7/142 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++    ++K  A K       N+    +G   D    + 
Sbjct: 33  NGGTAIGIRCKDGVVLAVEKLIT--SKLLKPGANKRIATVDRNVGIVSSGLVPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R   +   +           A   R+  Y+   +A  L +      V + +G        
Sbjct: 91  RARDEAASWRKTYKGPIPTSALANRLGGYV---QAYTLYSSVRPFGVTSIVGGWDSEAEL 147

Query: 134 VMAI--GSGGSYALSAARALMS 153
            +    GSG           + 
Sbjct: 148 SVDGQVGSGPRVGAGGKAKDLK 169


>gi|156838868|ref|XP_001643132.1| hypothetical protein Kpol_455p5 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113727|gb|EDO15274.1| hypothetical protein Kpol_455p5 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 249

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 45/167 (26%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    V+IA + + S     +  +  K+  L                  + + 
Sbjct: 31  GVTSLGIKATNGVIIATEKK-SSSPLALTEDVSKISLLTPDIGAVYSGMGPDFRVLVDKS 89

Query: 75  LEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
            +     Y                  ++ ++      +R     +L+A         +  
Sbjct: 90  RKVAHTNYKRIYGEYPPTKLLVSEIAKIMQEATQSGGVRPFGVSLLVAGHDEHNGFSLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                        AIG G   A +      + +   E+    A+ IA
Sbjct: 150 VDPSGSYFPWKATAIGKGSIAAKTFLEKRWNNELELED----AIHIA 192


>gi|126321767|ref|XP_001364240.1| PREDICTED: similar to proteasome (prosome, macropain) subunit,
           alpha type, 8 [Monodelphis domestica]
          Length = 258

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 56/177 (31%), Gaps = 25/177 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG-------NIIAGFAGSSA 66
             +T + +R   +VV+  + + S+ +   +   RK+  L          ++I  F G +A
Sbjct: 30  KGSTAVGIRGTDIVVLGVEKK-SVAKLQDERTVRKICALDDHVCMAFAAHVIRVFIGLTA 88

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------D 114
           DA  ++ R   + + +   +            +A   +            + A      D
Sbjct: 89  DARIVINRARVECQSHKLTVEDPVTVEYITRFIATLKQRYTQSNGRRPFGISALIVGFDD 148

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
             I  +               AIG                   +T + A ++A +A+
Sbjct: 149 DGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEGTIATDSEAIKLAIRAL 205


>gi|238606166|ref|XP_002396644.1| hypothetical protein MPER_03076 [Moniliophthora perniciosa FA553]
 gi|215469594|gb|EEB97574.1| hypothetical protein MPER_03076 [Moniliophthora perniciosa FA553]
          Length = 59

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 6/49 (12%), Positives = 21/49 (42%)

Query: 11 VKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA 59
          ++ +  +++ +     V IA D ++      + +N +K+  +     + 
Sbjct: 1  MEYNGGSVIAMVGKDCVAIACDLRLGNQALGISSNFQKIFPVSDRIYLG 49


>gi|296222425|ref|XP_002757179.1| PREDICTED: proteasome subunit alpha type-7-like isoform 1
           [Callithrix jacchus]
          Length = 256

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 61/199 (30%), Gaps = 28/199 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-----IIAGFAGSSADA 68
             +T + +R   +V++  + + S+ +   +   RK+  L          +  F G +ADA
Sbjct: 30  KGSTAVGIRGANIVILGVEKK-SVAKLQDERTVRKICALDDHVCMAFAALTIFTGLTADA 88

Query: 69  FTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKT 116
             ++ R   + + +   +            +A   +            + A      D  
Sbjct: 89  RVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDG 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAMSIAAD 171
           +  +               AIG                   ++ N A ++A KA+     
Sbjct: 149 VPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEV-- 206

Query: 172 ICVYTNH-NIVLETLKVGD 189
             V +   NI +  ++   
Sbjct: 207 --VQSGGKNIEIAVIRRNQ 223


>gi|325190904|emb|CCA25390.1| proteasome subunit alpha putative [Albugo laibachii Nc14]
 gi|325190979|emb|CCA25463.1| proteasome subunit alpha putative [Albugo laibachii Nc14]
          Length = 254

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  L +  +  VV+ G  +       +  + RK+ ++     I G AG  ADA TL   
Sbjct: 32  GSVCLGLTSNEYVVLCGVKR---QNDKLAQHQRKLYKIDDYMGI-GMAGLHADARTLARY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA--KDWRMDKYLRNLEAMIL---IADKTITLVITG 123
           +  +   +         + R   ++A  K      Y+R    + L    ADK    +   
Sbjct: 88  MRTECLNHKFVYGSQIPIGRLVTDVADKKQECTQSYVRRPYGVGLLVAGADKKGVHLYQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
                  E   +AIGS    A +       T    S E++ + A+  
Sbjct: 148 CPSGNFYEYKAIAIGSRSQSARTYLEKHYQTFDNLSKEDLIQHAVQA 194


>gi|268567424|ref|XP_002639985.1| C. briggsae CBR-PAS-3 protein [Caenorhabditis briggsae]
 gi|187030814|emb|CAP30116.1| CBR-PAS-3 protein [Caenorhabditis briggsae AF16]
          Length = 250

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T L +     +VIA + +             KV RL       +AG    +      
Sbjct: 30  HAGTCLGILASDGIVIAAERKNVHKLLDDSVLTEKVYRLSDNISCTVAGITADANILINH 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L                  QL+++     + +      R     +L A         +  
Sbjct: 90  LRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYAGWDKHYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAM 166
                         IGS    A++  +      T   A+++A K +
Sbjct: 150 SDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPTLEEAKKLAIKVL 195


>gi|145534101|ref|XP_001452795.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420494|emb|CAK85398.1| unnamed protein product [Paramecium tetraurelia]
          Length = 194

 Score = 46.1 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 49/165 (29%), Gaps = 15/165 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE--- 73
           +I  ++    V+IA DG ++     +K    K+ +L    I  G +G  AD  +  E   
Sbjct: 3   SIFGLQGGDFVIIACDGSIAHSILKIKETEDKILKLDDHKIF-GISGEGADRNSFGEIVH 61

Query: 74  ----RLEKKLEQYPNQLLRSS---VELAKDWRMDKYLRNLEAMILIADKT-ITLVITGMG 125
                +  K   Y N    +       A+  R          ++   D      +     
Sbjct: 62  KNHCLIRYKTGGYMNLQETAHFVRSMYAQAIRSRDGPHQCNGLLGGVDSDGTPSLYWLDY 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMS 167
                +    A G    + L             E   EI +K + 
Sbjct: 122 LGSLQKITRGAQGYANYFLLGLLDNQYKPNLIKEEGIEIIKKCIK 166


>gi|71026530|ref|XP_762933.1| proteasome subunit alpha type 2 [Theileria parva strain Muguga]
 gi|68349885|gb|EAN30650.1| proteasome subunit alpha type 2, putative [Theileria parva]
          Length = 240

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 45/170 (26%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                L ++    VVIA + +      +   +  K+               +     L +
Sbjct: 32  KGAPTLGIKATNGVVIAAEKKQPS-TLIESDSLNKIDFFADHIGAVAAGMPADFRVVLKK 90

Query: 74  ------RLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITL 119
                     K +          QL++    + +++     +R     +L+A  D     
Sbjct: 91  GRKEVDNTAMKYKAMYGDDIPGAQLVKDVASIMQEFTHSGGVRPFGISLLLASYDDDGPQ 150

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
           +               AIG+      +            E+    A+ IA
Sbjct: 151 LYQIDPSGAFFGWKATAIGNRMQNNNTFLEKRYHPDLELED----AIHIA 196


>gi|223994791|ref|XP_002287079.1| proteasome subunit alpha type 3 [Thalassiosira pseudonana CCMP1335]
 gi|220978394|gb|EED96720.1| proteasome subunit alpha type 3 [Thalassiosira pseudonana CCMP1335]
          Length = 274

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 6/153 (3%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T L +R    VV+  +  +     V     R++  + +G  +A   G  +D   ++ 
Sbjct: 33  NAGTALGLRCSDGVVLCVEKPLQHKMLVAATTGRRIHTVDEGAGVA-ITGFVSDGRQIVG 91

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R  ++   Y               R+  Y+        +     + +I       +  + 
Sbjct: 92  RAREEASNYDETYGTKIPPHILANRLSTYVHYFTLHGALRPFGASTLIAAYDASTKKHSL 151

Query: 134 VMAIGSGGSYALSAARALM-----STQNSAEEI 161
            M   SG SY      A        T+     I
Sbjct: 152 HMVEPSGVSYEYYGCAAGRGRQPARTEMEKLAI 184


>gi|56752759|gb|AAW24591.1| SJCHGC02212 protein [Schistosoma japonicum]
          Length = 179

 Score = 46.1 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 40/143 (27%), Gaps = 13/143 (9%)

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK--YLRNLEAMI------ 110
            GF G + D  T+ +RL+ +   Y  +  R+         +    Y R            
Sbjct: 25  VGFPGLATDNQTVFQRLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVA 84

Query: 111 -LIADKTITLVITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KA 165
            +    +   V        +   N  +  G+           L      ++E+     + 
Sbjct: 85  GIDHTTSKPYVACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQC 144

Query: 166 MSIAADICVYTNHNIVLETLKVG 188
           +  A +    +     +  ++  
Sbjct: 145 ILNALNRDAISGWGARVYLIEKD 167


>gi|154345716|ref|XP_001568795.1| proteasome alpha 1 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066137|emb|CAM43927.1| putative proteasome alpha 1 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 265

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 51/168 (30%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +  + V+    VV+A   +  + +    +   KV  + +  +    +G  AD   L  
Sbjct: 31  NGSATVGVKGKDFVVLAALKRSPVAEL--SSYQEKVFEIDEH-VGMSISGLVADGRVLAR 87

Query: 74  RLEKKL--EQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVIT 122
            L  +    +Y         ++A               K    +  ++   D+    +  
Sbjct: 88  FLRTECMNYRYMYDNGMPVNQMANMIGEKHQRHIQCSGKRPFGVGLLLAGHDRLGPHLYQ 147

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN--SAEEIARKAMSI 168
            +      +    A+G     + +       +    + +E+   A+  
Sbjct: 148 TVPSGDVYDYKATAMGVRSQASRTYLEKHFESFLNCTLDELVAHALKA 195


>gi|195421053|ref|XP_002060833.1| GK20618 [Drosophila willistoni]
 gi|194156918|gb|EDW71819.1| GK20618 [Drosophila willistoni]
          Length = 173

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 43/163 (26%), Gaps = 19/163 (11%)

Query: 44  ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVE--LAKDWRMDK 101
            +  K+  +    ++ G  G   D   LL  +     +Y    L       LA      K
Sbjct: 2   RSQSKLFDVSPQTVL-GSVGCWCDTLALLSLVRSYSLKYELDNLMPVCPDSLASMLTRTK 60

Query: 102 YLRNLEAMILIADKTITLV---ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS- 157
           +        ++A      +                    G+GG   L         +   
Sbjct: 61  FTLQYFVSSVVAGIDSNGLGAVYFNHPSGNYLRLPYHISGTGGRIILPTLDWFEGNEEDQ 120

Query: 158 ------------AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
                       A EI+ +A   A D  ++  + + +  +   
Sbjct: 121 MNAITTSLTVDKAVEISMEAFRTARDRDIFIGNCMFINIITRE 163


>gi|126342959|ref|XP_001362650.1| PREDICTED: similar to Proteasome subunit alpha type 2 (Proteasome
           component C3) (Macropain subunit C3) (Multicatalytic
           endopeptidase complex subunit C3) [Monodelphis
           domestica]
          Length = 234

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 50/160 (31%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++     +      QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYHEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNSVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|221487111|gb|EEE25357.1| proteasome subunit alpha type, putative [Toxoplasma gondii GT1]
 gi|221506797|gb|EEE32414.1| proteasome subunit alpha type, putative [Toxoplasma gondii VEG]
          Length = 245

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 57/194 (29%), Gaps = 26/194 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + V    +VV+A + + +  +      ARKV  L +   +A FAG  ADA  L+ 
Sbjct: 28  RGGCAVGVMGKDLVVLAVEKKAAA-RLQEPRTARKVVMLDENLCLA-FAGLHADARVLIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD-KTITLVITGMGD 126
           +   + + Y      +         +A+  +   +   +    L           +    
Sbjct: 86  KTRVECQSYRLNTATAPSVDYISKFIAQVQQKYTHRGGVRPFGLSCLIAGAEHDGSIALY 145

Query: 127 VLEPENGVM-----AIGSGGSYALSAARALMSTQNS---AEEIARKAMS---IAADICVY 175
             EP          A+G              +       A  +A  A+     A      
Sbjct: 146 QTEPSGICAKWKAQAMGKNYRTVQEYLEKNYAPDLDEDGAVHLAVGALMEVVEAGHR--- 202

Query: 176 TNHNIVLETLKVGD 189
              +I +  +K   
Sbjct: 203 ---HIEVAVVKKEQ 213


>gi|1346784|sp|P48004|PSA7_RAT RecName: Full=Proteasome subunit alpha type-7; AltName:
           Full=Proteasome subunit RC6-1
 gi|1089797|dbj|BAA06463.1| proteasome subunit RC6-1 [Rattus rattus]
          Length = 254

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 52/175 (29%), Gaps = 23/175 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-----IIAGFAGSSADA 68
             +T + VR   +VV+  + + S+ +   +   RK+  L         ++A  +G +ADA
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDNVCMAFAVVASVSGLTADA 86

Query: 69  FTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KT 116
             ++ R   + + +   +            +A   +            + A         
Sbjct: 87  RIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDG 146

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
              +               AIG G                  T +   ++  KA+
Sbjct: 147 TPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 201


>gi|294901497|ref|XP_002777385.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
           50983]
 gi|239885012|gb|EER09201.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
           50983]
          Length = 228

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 43/174 (24%), Gaps = 33/174 (18%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFA----------------- 62
            +     V+IA D  V       K    K+  +    ++AG                   
Sbjct: 7   GIAGKDWVIIAADSHVEQSIVKFKTTEDKIYEMDNNKLVAGSNNKTNNNNNNRYHHHHHD 66

Query: 63  ------GSSADAFTLLERLEKKLEQYPNQLLRSSV----------ELAKDWRMDKYLRNL 106
                 G  AD+   LE + + +E Y                   ELA   R   Y  N+
Sbjct: 67  LLLLAAGPQADSNQFLEFISRNVELYALVNGVQLTTHALASFTRNELADALRKGPYQVNM 126

Query: 107 EAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                        +          +    A G    + L     L     + E+
Sbjct: 127 LIGGYDDKDGSASLYYMDYLASCQKITRGAHGYAAYFVLGLLDKLYKKDMTQED 180


>gi|195123961|ref|XP_002006470.1| GI21067 [Drosophila mojavensis]
 gi|193911538|gb|EDW10405.1| GI21067 [Drosophila mojavensis]
          Length = 263

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 58/169 (34%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +V+A + + +         + K+ RL +  +   AG    +    + 
Sbjct: 30  HAGTCLGILAEDGIVLAAECRSTNKLLDNAIPSEKIYRLNENMVCSVAGITSDANVLTSE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDSKYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAM 166
                         IG+    A+S  +  ++ + S     A+++A K +
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAISMLKQELADKESIKLEEAKDLAIKVL 198


>gi|330812955|ref|XP_003291381.1| 20S proteasome subunit alpha-3 [Dictyostelium purpureum]
 gi|325078441|gb|EGC32092.1| 20S proteasome subunit alpha-3 [Dictyostelium purpureum]
          Length = 248

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 56/172 (32%), Gaps = 14/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T++ ++    VVI  +  V        +N R        G  ++GF   +    T  
Sbjct: 33  NSGTLVAIKTKDGVVIGIEKLVPSKMLCHGSNRRIHHIDTHIGVGVSGFLADARQLITRA 92

Query: 73  ERLEKKLEQYPNQ---LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
               K+  Q   Q   +   S  +A    +     ++         +          ++E
Sbjct: 93  RSEAKQYRQVYGQPIPIKVLSQRIASYNHVHTLYGSVRPFGCSIAISGIDQYGPQLYMIE 152

Query: 130 PENGVM-----AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
           P    +     ++G G   A +    +  ++ +  E  ++   I     +Y+
Sbjct: 153 PSGSCIGYFGSSLGKGKQAAKNELEKVKFSEITTREAIKEVARI-----IYS 199


>gi|157108440|ref|XP_001650228.1| proteasome subunit alpha type [Aedes aegypti]
 gi|108868538|gb|EAT32763.1| proteasome subunit alpha type [Aedes aegypti]
          Length = 275

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 35/200 (17%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++     V+    + S     + +  +K+  +     I+  AG +ADA  L   
Sbjct: 32  GSATVGLKNKDYAVLIALKRASSE---LSSYQKKIISIDDHLGIS-IAGITADARILSRY 87

Query: 75  LEKKLEQY------PNQLLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           + ++   Y         + R    +         R D+    +  ++   D     +   
Sbjct: 88  MRQECLNYKYSYDDNYPVGRLIANVGNKMQVCTQRYDRRPYGVGLLVAGYDDQGPHIYQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIAR---KAMSIAADICVYT-- 176
                  +   M+IGS    A +     ++     S EE+ R   +A+         T  
Sbjct: 148 CPSANFFDCKAMSIGSRSQSARTYLEKHLNEFPDCSKEELIRHGVQALQD-------TLP 200

Query: 177 ------NHNIVLETLKVGDE 190
                 N NI +  +   ++
Sbjct: 201 NEVELNNKNISIAIVGKDEK 220


>gi|312258|emb|CAA46111.1| PUP2 [Saccharomyces cerevisiae]
          Length = 260

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     VV+  + + +    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGIATKEGVVLGVEKRATS-PLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIAD---KTI 117
                    Y ++      L +S  +LA               R     +LIA       
Sbjct: 93  RTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +       +  S +E
Sbjct: 153 YQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLSLKE 195


>gi|1041974|gb|AAB34629.1| Authors indicate mature processed protein N-terminus is Thr20
          [Saccharomyces cerevisiae]
          Length = 52

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 6/30 (20%), Positives = 13/30 (43%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKA 44
           T+I+ V     V++  D + + G  +   
Sbjct: 19 GTSIMAVTFKDGVILGADSRTTTGAYIANR 48


>gi|302696723|ref|XP_003038040.1| hypothetical protein SCHCODRAFT_63403 [Schizophyllum commune H4-8]
 gi|300111737|gb|EFJ03138.1| hypothetical protein SCHCODRAFT_63403 [Schizophyllum commune H4-8]
          Length = 255

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 14/164 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT L ++    +VIA + + S    V  +   KV  +     I  ++G   D   L+ +
Sbjct: 35  GTTSLGIKATNGIVIATEKK-SSSILVDDSMLDKVAVICPNIGIV-YSGMGPDFRVLITK 92

Query: 75  LEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             K  + Y            L +    + +       +R     +L+A         +  
Sbjct: 93  ARKTAQAYWKIYGEYPPTRVLTQEIATVMQQATQSGGVRPYGVSLLVAGWDSNRGPSLYQ 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A +      +   S E+    A+
Sbjct: 153 VDPSGSFWAWKASAIGKNMVNAKTFLEKRYNDDISLEDAIHTAL 196


>gi|81157903|dbj|BAE48202.1| proteasome alpha 2 [Paralichthys olivaceus]
          Length = 226

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 57/161 (35%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   L+ R  
Sbjct: 28  VGIKASNGVVLATEKK---QKSILYDEQSVHKVEPITKHIGMV-YSGMGPDYRVLVRRAR 83

Query: 77  KKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R L   +LIA  D+    +     
Sbjct: 84  KLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPLGVSLLIAGWDEDHPYLFQSDP 143

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 144 SGAYFAWKATAMGKNYVNGKTFLEKRYNNDLELEDAIHTAI 184


>gi|327284932|ref|XP_003227189.1| PREDICTED: proteasome subunit alpha type-3-like [Anolis
           carolinensis]
          Length = 255

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T L +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTALGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +    D     + 
Sbjct: 91  IAREEASNFRSNYGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYDDDDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L     +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKDMTCRDVVKEVAKI 197


>gi|17562788|ref|NP_506571.1| Proteasome Alpha Subunit family member (pas-1) [Caenorhabditis
           elegans]
 gi|12229891|sp|O17586|PSA6_CAEEL RecName: Full=Proteasome subunit alpha type-6; AltName:
           Full=Proteasome subunit alpha 1
 gi|3874351|emb|CAB02738.1| C. elegans protein C15H11.7, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 246

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 48/178 (26%), Gaps = 17/178 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL- 75
           T + V+     VIA   +V     ++      V ++ +              F +     
Sbjct: 38  TAVAVKGADAAVIAVQKRV-PDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQG 96

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA----------MILIADKTITLVITGMG 125
           E    +Y N        LAK            A           I   D+    V     
Sbjct: 97  EAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDP 156

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS-----TQNSAEEIARKAMSIAADICVYTNH 178
                    +++G     A S     +      T   A E+A +A+  +  I V +  
Sbjct: 157 AGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKD 214


>gi|194777793|ref|XP_001967865.1| GF20768 [Drosophila ananassae]
 gi|190631497|gb|EDV44914.1| GF20768 [Drosophila ananassae]
          Length = 212

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 11/154 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL +R    V++  D   +    V+     K++RL   +++A  AG ++D+    + + 
Sbjct: 3   TILGLRGRDFVMLTSDTVRTKKIMVLNDEKSKIQRLTNFSMMAA-AGDASDSLQFTDFIV 61

Query: 77  KKLEQYPNQLLRSSV----------ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           + +  Y                    LA   R D   +    +      T   +      
Sbjct: 62  RNMHLYKIINSYHMSIPAVVHFTRTHLASFLRCDTQRQLNLLLGGFDPWTGPELHYIDRF 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                      G+G  +       L S      E
Sbjct: 122 GSSTAILFGGHGAGIKFCGPIFDTLHSPYMDQRE 155


>gi|254572531|ref|XP_002493375.1| Alpha 5 subunit of the 20S proteasome involved in
           ubiquitin-dependent catabolism [Pichia pastoris GS115]
 gi|238033173|emb|CAY71196.1| Alpha 5 subunit of the 20S proteasome involved in
           ubiquitin-dependent catabolism [Pichia pastoris GS115]
 gi|328352610|emb|CCA39008.1| 20S proteasome subunit alpha 5 [Pichia pastoris CBS 7435]
          Length = 255

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 50/163 (30%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     +V+  + +VS    +  ++  K+  + +    A  G    +       
Sbjct: 34  GSTAIGICTSEGIVLGVEKRVSS-PMLESSSIEKIVEVDRHIGCAMSGLTADARSMIDHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIA---DKTI 117
                  + Y ++      L +S  +LA               R     +LIA   D+  
Sbjct: 93  RVSSLTHDLYYDEPVGVESLTQSVCDLALRFGEGASGEKRLMSRPFGVALLIAGFDDQKG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A    +    +  + ++
Sbjct: 153 PQLYHAEPSGTFYRYDAKAIGSGSEGAQQELQNEYHSSLTLKD 195


>gi|115767142|ref|XP_786996.2| PREDICTED: similar to Proteasome (prosome macropain) subunit alpha
           type 4 [Strongylocentrotus purpuratus]
 gi|115976496|ref|XP_001177432.1| PREDICTED: similar to Proteasome (prosome macropain) subunit alpha
           type 4 [Strongylocentrotus purpuratus]
          Length = 257

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 17/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +     V++A + + +         + K+ +L         +G ++DA  L  
Sbjct: 30  HAGTSLGILASDGVLLAAERRNTHKLLDDVVFSDKIYKLNSDMA-CSVSGITSDANVLTS 88

Query: 74  RLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y           QL+ +  ++ + +      R     IL           + 
Sbjct: 89  ELRLAGQRYFLQYQENIPNEQLVSTLCDIKQFYTQAGGKRPFGVSILYMGWDKHYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS----AEEIARKAMSIAADICVYTN 177
                          IG+  + A+S  +      ++    A  +A K +S   D+   T 
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAISMLKQEYKEGDTDLKGALALAVKVLSKTLDMTKVTP 208

Query: 178 HNIVLETLKVGD 189
             I + +L   D
Sbjct: 209 EKIEIASLTRED 220


>gi|294912864|ref|XP_002778209.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
          50983]
 gi|239886343|gb|EER10004.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
          50983]
          Length = 74

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 6  DKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL 52
          ++      +  T + V      V++ D +VS G ++   N  K+ +L
Sbjct: 28 NEFNPYMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKL 74


>gi|194755405|ref|XP_001959982.1| GF13142 [Drosophila ananassae]
 gi|190621280|gb|EDV36804.1| GF13142 [Drosophila ananassae]
          Length = 253

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 47/174 (27%), Gaps = 20/174 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            + T++ +R    V++A +  +S       A  R         I    AG  AD   + +
Sbjct: 33  KSGTVIGLRGKDCVILAVEKIISSKLHEEDAAGRIFTIEKN--IGMAIAGLVADGNYVAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE------------AMILIADKTITLVI 121
              ++   +  Q   +        R+  Y+                      +     + 
Sbjct: 91  IARQEAANFRQQFEHAIPLKHLCERVAGYIHAYTLYSAVRPFGLSVIFASWDEVEGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                         A G     A +    L       EE+ +     A +I +Y
Sbjct: 151 KIEPSGSSFGYYACASGKAKQQAKTEMEKL-KPNMETEELVK----SAGEI-IY 198


>gi|156089275|ref|XP_001612044.1| proteasome A-type and B-type family protein [Babesia bovis]
 gi|83616175|gb|ABC25612.1| putative proteasome subunit [Babesia bovis]
 gi|154799298|gb|EDO08476.1| proteasome A-type and B-type family protein [Babesia bovis]
          Length = 257

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 45/163 (27%), Gaps = 15/163 (9%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERL 75
            + +  D  VV+A D  +S           K+ +L       +AG    +       +  
Sbjct: 34  TVGLLCDLGVVLAADKPISTPLLDPGKINEKLYKLDSHMFCAVAGLTADATVLINTCKLY 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGD 126
            ++            Q +     L + +     LR      L A     L   +      
Sbjct: 94  AQRHRYAYGEPQDVEQHVVQICNLKQSYTQFGGLRPFGVSFLFAGWDSHLGFQLYHTDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                    AIG     A S  R       + +E    A+ +A
Sbjct: 154 GNYSGWKATAIGHNSQPAQSMLRQEWKEGMNLDE----ALYLA 192


>gi|292657036|ref|YP_003536933.1| Proteasome subunit alpha [Haloferax volcanii DS2]
 gi|12229945|sp|Q9V2V5|PSA2_HALVD RecName: Full=Proteasome subunit alpha 2; AltName: Full=20S
           proteasome alpha subunit 2; AltName: Full=Proteasome
           core protein PsmA 2
 gi|5833208|gb|AAD53405.1|AF126261_1 alpha-2 subunit of 20S proteasome [Haloferax volcanii DS2]
 gi|291370566|gb|ADE02793.1| Proteasome alpha subunit [Haloferax volcanii DS2]
          Length = 249

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 45/157 (28%), Gaps = 11/157 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
               +L VR    VV+A   + +  + +   +  K+ +L      A     +     +  
Sbjct: 34  RGAPVLGVRTADGVVLAA-LRSTPSELMEAESIEKLHKLDDALGAATAGHVADARKLVDF 92

Query: 74  RLEKKLEQYPN--------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI--TLVITG 123
                  ++           L ++  +  ++       R   A +LI         +   
Sbjct: 93  ARTTAQREHLRYGEPIGVETLTKTITDNIQESTQSGGTRPYGASLLIGGVENGSGRLFAT 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                  E   +AIG       +A     +   S E+
Sbjct: 153 DPSGTPQEWKAVAIGGHREDVQAALEDGYAEDLSLED 189


>gi|221059017|ref|XP_002260154.1| 20S proteasome beta 4 subunit [Plasmodium knowlesi strain H]
 gi|193810227|emb|CAQ41421.1| 20S proteasome beta 4 subunit, putative [Plasmodium knowlesi strain
           H]
          Length = 195

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 45/163 (27%), Gaps = 12/163 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ ++    +++A D         +K + +       GN      GS  D     E + 
Sbjct: 3   TLIGLKGKNFIILAADTYSVNSIIKLKNDDKTKFYDINGNKCLLLGGSIGDRIQFGEFIR 62

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL-RNLEAMILIADKTITLVITGMGDVLEPENGVM 135
           K +  Y  Q        +  +   K L   L       +  I       G  L   + + 
Sbjct: 63  KNVHLYQYQNSTDLFVKSFAFFTRKNLAYYLRRNPYEVNCLIAGYDNKDGYQLYWCDYLS 122

Query: 136 --------AIGSGGSYALSAARALMSTQNSAEE---IARKAMS 167
                   A G G                + +E   I +K   
Sbjct: 123 NMDAVNKGAHGYGAYLVNGILDKYYHENINLDEALLIFKKCFE 165


>gi|299117379|emb|CBN75335.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 255

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 17/169 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + VR    V++A +  +     V  +N R        G  +AG +  +       
Sbjct: 33  NSGTAMGVRCKDGVLLAVEKLLISKMLVAGSNRRVHGVSKHVGMAVAGLSADARQIVYRG 92

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKT----ITL 119
                ++  Y               R+ +Y         LR   A +L+A          
Sbjct: 93  RD---EVAGYIENYGSQMPPSMLADRLAQYVHYFTLHGSLRPFGASVLVAGYDVELKKHE 149

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           +       +       A+G G   A +    L     + +E  ++   I
Sbjct: 150 LYVVEPSGVMYRYFGAAVGKGRQAAKTEMEKLKFDDMTCKEAMKQVCKI 198


>gi|22947842|gb|AAN07899.1| 20S proteasome alpha 6 subunit [Nicotiana benthamiana]
          Length = 274

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    V++A   +     + + ++ +K+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSKTHVILACVNKA---NSELSSHQKKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQY------PNQLLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y      P  + R  V+LA        R  K    +  ++   D++   +   
Sbjct: 88  MRNECINYSYAYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       T   +S E + + A+
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFETFMDSSRETLLKDAL 192


>gi|45190899|ref|NP_985153.1| AER296Wp [Ashbya gossypii ATCC 10895]
 gi|44983941|gb|AAS52977.1| AER296Wp [Ashbya gossypii ATCC 10895]
          Length = 260

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 51/163 (31%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +  +  VV+  + +V+    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGIATNEGVVLGVEKRVTS-PLLESDSIEKIVEVDRHIGCAMSGLTADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTIT 118
                    Y ++      L +S  +LA         + R+      +  +I   DK   
Sbjct: 93  RISSVTHNLYYDEEIGVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGYDKEDG 152

Query: 119 L-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A S  +    +  + +E
Sbjct: 153 YQLYHAEPSGTFYRYNAKAIGSGSEGAQSELQNEWYSSLTLKE 195


>gi|18447104|gb|AAL68143.1| AT30052p [Drosophila melanogaster]
          Length = 249

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+ +       RK+  L +   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSEMQEDRTVRKISMLDRHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
           R + + + +            + R   +L + +      R      LI          + 
Sbjct: 88  RGQVECQSHRLNFENQVTPEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                 +  E    A G   +                    A ++A +A+
Sbjct: 148 HTEPSGIFHEYKATATGRWANTVREFFEKAYGDHEVTTKCDAIKLAMRAL 197


>gi|126643898|ref|XP_001388136.1| 20S proteasome beta subunit D2 (PBD2)  [Cryptosporidium parvum Iowa
           II]
 gi|126117213|gb|EAZ51313.1| 20S proteasome beta subunit D2 (PBD2) , putative [Cryptosporidium
           parvum Iowa II]
 gi|323508735|dbj|BAJ77261.1| cgd1_420 [Cryptosporidium parvum]
 gi|323509775|dbj|BAJ77780.1| cgd1_420 [Cryptosporidium parvum]
          Length = 203

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 43/155 (27%), Gaps = 18/155 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V +A D         +     K+  + +   + G  G+  D     E ++  
Sbjct: 5   IGIKGPDFVALASDTVAFSNVFRLSLKDDKIMEIDENK-LIGVGGTLGDRMQFGEYIKCN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV---- 134
           L  Y  +        A       + RN  A +L +D     ++ G     E         
Sbjct: 64  LNLYRLRNGVQLSTTA----TANFTRNELAELLRSDPHNVNILIGGYTKEEGAKLYWMDE 119

Query: 135 ---------MAIGSGGSYALSAARALMSTQNSAEE 160
                     A G GG               + EE
Sbjct: 120 LASLGNVNNAAHGYGGLLVTGILDKYYKPNITQEE 154


>gi|331237613|ref|XP_003331463.1| proteasome subunit alpha type-2 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309310453|gb|EFP87044.1| proteasome subunit alpha type-2 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 250

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 14/164 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+ L ++    VVIA + + +    V  +   KV  +     +  ++G   D   L+ R
Sbjct: 34  GTSSLGIKASNGVVIATEKK-TASILVDDSIIEKVASICPNIGMV-YSGMGPDYRVLVTR 91

Query: 75  LEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
             K  + Y            L +    + ++      +R     +LIA         +  
Sbjct: 92  ARKIAQSYWKIYGEYPPTRLLTQEIATVMQEATQSGGVRPFGVSLLIAGWDEHRGSTLYQ 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A +      + + S E+    A+
Sbjct: 152 VDPSGSFWPWKASAIGKNMVNAKTFLEKRYNDELSLEDAIHTAI 195


>gi|237831483|ref|XP_002365039.1| proteasome subunit alpha type 7, putative [Toxoplasma gondii ME49]
 gi|211962703|gb|EEA97898.1| proteasome subunit alpha type 7, putative [Toxoplasma gondii ME49]
          Length = 245

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 57/194 (29%), Gaps = 26/194 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + V    +VV+A + + +  +      ARKV  L +   +A FAG  ADA  L+ 
Sbjct: 28  RGGCAVGVMGKDLVVLAVEKKAAA-RLQEPRTARKVVMLDENLCLA-FAGLHADARVLIN 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD-KTITLVITGMGD 126
           +   + + Y      +         +A+  +   +   +    L           +    
Sbjct: 86  KTRVECQSYRLNTATAPSVDYISKFIAQVQQKYTHRGGVRPFGLSCLIAGAEHDGSIALY 145

Query: 127 VLEPENGV-----MAIGSGGSYALSAARALMSTQNS---AEEIARKAMS---IAADICVY 175
             EP          A+G              +       A  +A  A+     A      
Sbjct: 146 QTEPSGICAKWKGAAMGKNYRTVQEYLEKNYAPDLDEDGAVHLAVGALMEVVEAGHR--- 202

Query: 176 TNHNIVLETLKVGD 189
              +I +  +K   
Sbjct: 203 ---HIEVAVVKKEQ 213


>gi|168009590|ref|XP_001757488.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691182|gb|EDQ77545.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 219

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 64/179 (35%), Gaps = 22/179 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++            +  + +    A  +G +ADA T+++ 
Sbjct: 34  GSTAVGLKTKEGVVLAVEKRITS-----------ITEIDEHIGCA-MSGLTADAHTIVKH 81

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK----YLRNLEAMILIA--DKTITLVITGMGDVL 128
              + +    +    ++        +       R     +LIA  D     +        
Sbjct: 82  GRVETQPMSVESTTQALCDLALRFGEGDEESVSRPFGVSLLIAGDDGAGPCLYYTNLSGT 141

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYTNHNIVLET 184
             +    AIGSG   A ++ +   +   +   AE +A   +    +  V T+ N+ +  
Sbjct: 142 FWQCDAKAIGSGSEGADTSLQEHFNRNMTLEGAETLALSTLKQVMEEKV-TSSNVDIAK 199


>gi|1041976|gb|AAB34631.1| Doa5, PUP2=alpha-type proteasome subunit zeta homolog
           [Saccharomyces cerevisiae, Peptide, 243 aa]
          Length = 243

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     VV+  + + +    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGIATKEGVVLGVEKRATS-PLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIAD---KTI 117
                    Y ++      L +S  +LA               R     +LIA       
Sbjct: 93  RTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +       +  S +E
Sbjct: 153 YQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLSLKE 195


>gi|3114273|pdb|1RYP|E Chain E, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|3114287|pdb|1RYP|S Chain S, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
           Angstroms Resolution
 gi|11513416|pdb|1G65|D Chain D, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|11513430|pdb|1G65|R Chain R, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
           Molecular Basis For Selectivity Of
           Alpha,Beta-Epoxyketone Proteasome Inhibitors
 gi|20150380|pdb|1JD2|D Chain D, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|20150401|pdb|1JD2|Y Chain Y, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
           Complex: A Non-Covalent Proteasome Inhibitor
 gi|93279371|pdb|2F16|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279385|pdb|2F16|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Bortezomib
 gi|93279659|pdb|2FNY|D Chain D, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|93279673|pdb|2FNY|R Chain R, Homobelactosin C Bound To The Yeast 20s Proteasome
 gi|99032205|pdb|2FAK|D Chain D, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|99032219|pdb|2FAK|R Chain R, Crystal Structure Of Salinosporamide A In Complex With The
           Yeast 20s Proteasome
 gi|112490846|pdb|2GPL|D Chain D, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|112490860|pdb|2GPL|R Chain R, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
           Proteasome Inhibitors
 gi|190016370|pdb|3D29|D Chain D, Proteasome Inhibition By Fellutamide B
 gi|190016384|pdb|3D29|R Chain R, Proteasome Inhibition By Fellutamide B
 gi|197725324|pdb|3E47|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|197725338|pdb|3E47|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Homobelactosin C
 gi|211939215|pdb|3DY3|D Chain D, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939229|pdb|3DY3|R Chain R, Crystal Structure Of Yeast 20s Proteasome In Complex With
           The Epimer Form Of Spirolactacystin
 gi|211939243|pdb|3DY4|D Chain D, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|211939257|pdb|3DY4|R Chain R, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Spirolactacystin
 gi|238828240|pdb|3GPJ|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|238828254|pdb|3GPJ|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Syringolin B
 gi|258588324|pdb|3GPT|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588338|pdb|3GPT|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Slow Substrate Ligand
 gi|258588352|pdb|3GPW|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588366|pdb|3GPW|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Salinosporamide Derivatives: Irreversible Inhibitor
           Ligand
 gi|258588546|pdb|3HYE|D Chain D, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|258588560|pdb|3HYE|R Chain R, Crystal Structure Of 20s Proteasome In Complex With
           Hydroxylated Salinosporamide
 gi|330689384|pdb|3MG4|D Chain D, Structure Of Yeast 20s Proteasome With Compound 1
 gi|330689398|pdb|3MG4|R Chain R, Structure Of Yeast 20s Proteasome With Compound 1
          Length = 242

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     VV+  + + +    +   +  K+  + +    A  G    +       
Sbjct: 26  GSTAIGIATKEGVVLGVEKRATS-PLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHA 84

Query: 73  ERLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIAD---KTI 117
                    Y ++      L +S  +LA               R     +LIA       
Sbjct: 85  RTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDG 144

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +       +  + +E
Sbjct: 145 YQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKE 187


>gi|170034787|ref|XP_001845254.1| proteasome subunit alpha type 3 [Culex quinquefasciatus]
 gi|167876384|gb|EDS39767.1| proteasome subunit alpha type 3 [Culex quinquefasciatus]
          Length = 250

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 53/167 (31%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T++ +R    VV+A +  ++      ++  R        +I    +G  AD   +++
Sbjct: 30  NSGTVIGLRGKDGVVLAVEKLITSKLYEPESGTRIFTI--DTSIGMAISGMIADGRAIVD 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL------------IADKTITLVI 121
              ++   Y  Q  R       + R+  Y                       ++T   + 
Sbjct: 88  LARQEAANYRQQYDRPIPLRQLNDRLSSYFHAYTLYSAVRPFGVSVILASWTEETGPEMY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L  ++ +  E+   +  I
Sbjct: 148 MIDPSGVACGYYGCAIGKAKQTAKTEIEKLKLSEMTVNELITTSGKI 194


>gi|124513790|ref|XP_001350251.1| proteasome subunit, putative [Plasmodium falciparum 3D7]
 gi|23615668|emb|CAD52660.1| proteasome subunit, putative [Plasmodium falciparum 3D7]
          Length = 241

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 63/195 (32%), Gaps = 28/195 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
                + ++     V+A + +      + K        K+ +L + N +A FAG +ADA 
Sbjct: 28  KGGCAVAIKSSNFAVLAVEKK-----NIPKLQNPKTTEKLIKLDEHNCLA-FAGLNADAR 81

Query: 70  TLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTI 117
            L+ +   + ++Y   +         +  +AK  +   +   +    +        +   
Sbjct: 82  VLVNKTRLECQRYYLNMDEPAPVDYIAKYVAKVQQKFTHRGGVRPFGIATLIAGFKNNKE 141

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +       +       AIG                    ++   +A KA+    ++  
Sbjct: 142 ICIYQTEPSGIYAAWKAQAIGKNAKIVQEFLEKNYQENMEQKDCIFLALKAIFEVVEL-- 199

Query: 175 YTNHNIVLETLKVGD 189
            ++ N+ +  L   D
Sbjct: 200 -SSKNVEVALLTEKD 213


>gi|332376146|gb|AEE63213.1| unknown [Dendroctonus ponderosae]
          Length = 259

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 17/192 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           A T L +  +  +++  + + +         + K+ +L +  +    AG ++DA  L   
Sbjct: 31  AGTCLGILANDGILLVAERRNTNKLLDEVFTSEKIYKLNEDMV-CSVAGITSDANVLTNE 89

Query: 75  LEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L    ++Y  Q   S            + + +      R     IL           +  
Sbjct: 90  LRVIGQRYLYQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  S A+S+ +           SA+ +A K +S   D+   T+ 
Sbjct: 150 SDPSGNYSGWKATCIGNNSSAAISSLKQEYKEGEMTLASAKSLAVKVLSKTLDMTKLTSE 209

Query: 179 NIVLETLKVGDE 190
            + + TL   ++
Sbjct: 210 KVEMATLSRVND 221


>gi|225704204|gb|ACO07948.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
          Length = 261

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 59/190 (31%), Gaps = 15/190 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA + L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGSCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVG 188
            + + TL   
Sbjct: 210 KVEIATLTRE 219


>gi|45187518|ref|NP_983741.1| ADL354Wp [Ashbya gossypii ATCC 10895]
 gi|44982256|gb|AAS51565.1| ADL354Wp [Ashbya gossypii ATCC 10895]
          Length = 250

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 48/166 (28%), Gaps = 15/166 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T L ++    VVIA + + +   T+     +  +     G + +G             
Sbjct: 31  GVTSLGIKATNGVVIATEKKANTTLTIKDTLDKVSQITPDIGAVYSGMGPDFRVLINKSR 90

Query: 74  RLEK----KLEQYPNQLLRSSVELAKDWR---MDKYLRNLEAMILIADKTIT---LVITG 123
           +       K             ++AK  +       +R     +L+A         +   
Sbjct: 91  KTAYGSYRKAYGEYPPTKILVSQIAKIMQEATQSGGVRPFGVSLLVAGYDEHNGFGLYQV 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                       AIG G + A +      + +   E+    A+ IA
Sbjct: 151 DPSGSYFPWKATAIGKGATAAKTFLEKRWNDELELED----AIHIA 192


>gi|195027167|ref|XP_001986455.1| GH20521 [Drosophila grimshawi]
 gi|193902455|gb|EDW01322.1| GH20521 [Drosophila grimshawi]
          Length = 263

 Score = 45.7 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 58/169 (34%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +V+A + + +         + K+ +L +  +   AG    +    + 
Sbjct: 30  HAGTCLGILAEDGIVLAAECRSTNKLLDNAIPSEKIYKLNENMVCSVAGITSDANVLTSE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDSKYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                         IG+    A+S  +  ++ ++      A+++A K +
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAISMLKQELADKDNIKLEEAKDLAVKVL 198


>gi|224286946|gb|ACN41175.1| unknown [Picea sitchensis]
          Length = 249

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 53/190 (27%), Gaps = 20/190 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+A + + +  +       RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDNIVLAVERKSTA-KLEDSRTVRKIVNLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   +               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGAPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNH 178
                          A G   +               +   ++A +A+    +      +
Sbjct: 147 YQTDPSGTFSAWKTNATGRNSNSIRDFLEKNYKETAGHETIKLAARALLEVVES---KGN 203

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 204 NIEIAVMTRD 213


>gi|298706363|emb|CBJ29372.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1328

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 14/164 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ V+    V++ GD        +M    RKV  L    ++   +G   D    +E L+
Sbjct: 30  TLMGVKGRDFVLLGGDSAFFRSVVIMDTEYRKVVELSDN-VLVAASGDQGDVEMFVEWLK 88

Query: 77  KKLEQYPNQLLRSS-----VELAKDWRMDKYLRNLEAMILIAD-------KTITLVITGM 124
           +  +    +  R          A+    DK  +      + A             +    
Sbjct: 89  RNAQLMQLESSRPVGARTLAHFARRNLADKLRKQGAGQAVTALLGGWNEVAWQPELFWLD 148

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +    A G    +ALS          S +E AR  M  
Sbjct: 149 ALGALQDVAFGAHGLASRFALSLLDNGFREGMSLDE-ARHLMET 191


>gi|242012576|ref|XP_002427007.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
 gi|212511245|gb|EEB14269.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
          Length = 294

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 17/188 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +     +++A + +           + K+ +L +  +    AG ++DA  L  
Sbjct: 30  HAGTCLGILAKDGILLAAEKRNINKLLDEVVFSEKIYQLNENMV-CSVAGITSDANVLTG 88

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y  Q   S            + + +      R     IL           + 
Sbjct: 89  ELRMIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDKYYGYQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTN 177
                          IG+  + A+S  +            A+ +A K +S   D+   T 
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAVSNLKQEYKENETTLKDAQALAIKVLSKTLDMAKLTP 208

Query: 178 HNIVLETL 185
             + + TL
Sbjct: 209 EKVEMATL 216


>gi|67539246|ref|XP_663397.1| hypothetical protein AN5793.2 [Aspergillus nidulans FGSC A4]
 gi|40743696|gb|EAA62886.1| hypothetical protein AN5793.2 [Aspergillus nidulans FGSC A4]
 gi|259484718|tpe|CBF81179.1| TPA: proteasome subunit alpha type 3, putative (AFU_orthologue;
           AFUA_6G06350) [Aspergillus nidulans FGSC A4]
          Length = 298

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 57/201 (28%), Gaps = 45/201 (22%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++    ++K  A K       ++    +G + D    + 
Sbjct: 33  NGGTSIGIRCKDGVVLAVEKIIT--SKLLKPGANKRISTVDRHVGIVSSGLAPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTI------- 117
           R   +   +           A   R+  Y         +R      ++            
Sbjct: 91  RARDEASSWRGIYKSPIPVSALANRLGGYVQAYTLYSSVRPFGVTSIVGGWDSEAELAVD 150

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                                   +       L       A G G   A +    L    
Sbjct: 151 GQVGSGPQSGSGGKVEGAKSGGPGLYMIEPSGLYWGYYGAATGKGRQAAKAELEKL---D 207

Query: 156 NSAEEIA-RKAMSIAADICVY 175
            ++E+++ + A+  AA I +Y
Sbjct: 208 LASEKLSLQDAVKEAARI-IY 227


>gi|303273250|ref|XP_003055986.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462070|gb|EEH59362.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 251

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 16/167 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + SL +     + +K++ L +  +   FAG +ADA  L+ 
Sbjct: 29  KGALAVGVRGKDTVVLGVEKK-SLAKLQDPRSMKKIQLLDEH-VCVAFAGLTADARILIN 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------------LIADKTITLVI 121
           R   + + +   L  +         +    +                   ++ +    + 
Sbjct: 87  RARLEAQNHRLTLEDAVSVEYITRYIGGVQQKYTQSGGVRPFGLSTLITGVSPEGKPQLF 146

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAM 166
                    E    A G              S  +     ++  +A+
Sbjct: 147 YTDPSGTFSEWKANATGRNSKALREWLEKNYSETSDVETVKLTLRAL 193


>gi|145355044|ref|XP_001421781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582019|gb|ABP00075.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 217

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 39/150 (26%), Gaps = 11/150 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +         V+  D   +    V K +  K+  L    I+A  +G   D     E L  
Sbjct: 4   VFGFVGYDFAVLVADRAATQQIIVQKLDEDKIVELDSTKIMA-LSGPKGDCVAFGEYLRA 62

Query: 78  KLEQYPNQLLR----------SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
            +  Y  +             +  ELA+  R   Y  N         K    +       
Sbjct: 63  NVRLYRLKYGHELDVSATAHYARNELAEALRSGPYQVNCLLAGFDKLKNEPELHFMDYLA 122

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNS 157
                     G GG + LS          S
Sbjct: 123 TCHRVNTGGHGYGGMFCLSLFDKHWVPNMS 152


>gi|308474035|ref|XP_003099240.1| CRE-PAS-3 protein [Caenorhabditis remanei]
 gi|308267543|gb|EFP11496.1| CRE-PAS-3 protein [Caenorhabditis remanei]
          Length = 250

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 47/166 (28%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T L +     +VIA + +             KV RL       +AG    +      
Sbjct: 30  HAGTCLGILASDGIVIAAERKNVHKLLDDSVLTEKVYRLSDNISCTVAGITADANILINH 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L                  QL+++     + +      R     +L A         +  
Sbjct: 90  LRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYAGWDKHYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAM 166
                         IGS    A++  +    +     A+++A K +
Sbjct: 150 SDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPSLEEAKKLAIKVL 195


>gi|168066948|ref|XP_001785391.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663013|gb|EDQ49804.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 249

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+  + + +          RK+ +L +   +A FAG +ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTIVLGVEKKSTAKLQDA-RTVRKILKLDEHVSLA-FAGLTADARVLVN 86

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +          R    L + +     +R      LI           +
Sbjct: 87  RARIECQSHRLTVEDPVTVEYITRFIAGLQQKYTQSGGVRPFGISTLIVGFDPYTGVPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE--EIARKAMSIAADICVYTNH 178
                          A G   +          +  + AE  ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSVREFLEKNYTETSGAETVKLAVRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   +
Sbjct: 203 KNIEIAVMTKNE 214


>gi|294878925|ref|XP_002768515.1| proteasome subunit beta type 6,9, putative [Perkinsus marinus ATCC
           50983]
 gi|239871073|gb|EER01233.1| proteasome subunit beta type 6,9, putative [Perkinsus marinus ATCC
           50983]
          Length = 104

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 3/73 (4%)

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICVYT 176
           V +        +  +   GSG +Y       L     S   AE+   KA++ A      +
Sbjct: 20  VYSIPLGGTIIKQNIATGGSGSTYITGLVDHLYRPDMSRGEAEDFVAKAVAHAMARDGSS 79

Query: 177 NHNIVLETLKVGD 189
              I + T+   D
Sbjct: 80  GGVIRVTTVTEKD 92


>gi|168006015|ref|XP_001755705.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693024|gb|EDQ79378.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 249

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+  + + +          RK+ +L +   +A FAG +ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTIVLGVEKKSTAKLQDA-RTVRKILKLDEHVSLA-FAGLTADARVLVN 86

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +          R    L + +     +R      LI           +
Sbjct: 87  RARIECQSHRLTVEDPVTVEYITRFIAGLQQKYTQSGGVRPFGISTLIVGFDPYTGVPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE--EIARKAMSIAADICVYTNH 178
                          A G   +          +  + AE  ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSVREFLEKNYTETSGAETVKLAVRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   +
Sbjct: 203 KNIEIAVMTKNE 214


>gi|316968258|gb|EFV52559.1| dihydrouridine synthase (Dus) superfamily [Trichinella spiralis]
          Length = 355

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 16/155 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ +  D  VVIA D ++S G+        ++ R+    I+ G +G  AD   L   
Sbjct: 190 GASVIALMFDQGVVIAADTKLSYGRFSRYKGVSRLMRVNDNTIL-GVSGDYADYQYLQSI 248

Query: 75  LEKKLEQYPNQLLR------------SSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           +  +     +  +R            +SV  A+  +++    +     +        + T
Sbjct: 249 INGRQMGMNSSQMRGEFTPASMHTFLTSVLYARRSKLNPLWNSYVVCGVTEGTKTPYLGT 308

Query: 123 GMGDVLEPENGVMAIG---SGGSYALSAARALMST 154
               V+  +N V+      SG              
Sbjct: 309 YELGVVTADNCVITGKHTVSGKWGHAGLITTRYEE 343


>gi|156100577|ref|XP_001616016.1| proteosome subunit alpha type 1 [Plasmodium vivax SaI-1]
 gi|148804890|gb|EDL46289.1| proteosome subunit alpha type 1, putative [Plasmodium vivax]
          Length = 269

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 63/183 (34%), Gaps = 21/183 (11%)

Query: 15  ATTILTVRKDGVVVIAG-DGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            T  + ++    VV+ G   ++S     +  +  K+ ++     +   +G ++DA  L +
Sbjct: 32  GTCAVAIKSKDFVVVCGLKKRISK----LSFHQEKLFKIDDYIGV-TMSGITSDAKVLTK 86

Query: 74  RLEKKLEQYP-----NQLLRSSVELAKDWRMDKYLRNLE-----AMILIADKTITLVITG 123
            +  +   +      N  +   V+   D       R+        +I+        +   
Sbjct: 87  YMRNECLSHKFLFDENMNIEKLVKKVADKYQQNTQRSSRRAFGVGLIIAGYFKEPYIFET 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHN-I 180
             +    E   ++ G+    + +     +     +S EE+    +   A  C  ++ N +
Sbjct: 147 KPNGSYFEYIALSFGARSHASKTYLEKNVHLFEDSSLEELTIHCLK--ALRCSLSSENEL 204

Query: 181 VLE 183
            +E
Sbjct: 205 TIE 207


>gi|134037046|gb|ABO47863.1| threonine endopeptidase [Alexandrium fundyense]
          Length = 254

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 12/170 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + +     V+ A +  +     V   N R        G  IAGF+  S       
Sbjct: 33  NSGTTVAICCKDGVIFAVEKFLLSKMLVQGTNKRIFPVHRHAGMSIAGFSADSRQIVARA 92

Query: 73  ERLEKKL----------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
                +           E    +L          W +  +  ++    +  D     +  
Sbjct: 93  RSEAHQYKNSYNEEIPPELLAERLGLFVHAYTLYWSIRPFGCSVLLGCVDQDTKKPSLFC 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                +  +    AIG G   A +    L++    +   A +A+   A I
Sbjct: 153 VDPAGMVFKYSGTAIGKGKQAAKTEIEKLLANGTESLTCA-EALVHVAKI 201


>gi|154299945|ref|XP_001550390.1| hypothetical protein BC1G_10863 [Botryotinia fuckeliana B05.10]
 gi|150857143|gb|EDN32335.1| hypothetical protein BC1G_10863 [Botryotinia fuckeliana B05.10]
          Length = 184

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 40/142 (28%), Gaps = 18/142 (12%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++KA+  K R L   + +  F+G + D     E ++  
Sbjct: 14  LGITGKDFTIIAASKAAMRGATILKASDDKTRAL-NQHTLMAFSGEAGDTIQFAEYIQAN 72

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIG 138
            + Y  +                         +   K++  +               A G
Sbjct: 73  AQLYSMRNNIDL-----------------PYAIDRRKSVLSLYWLDYLASLAPLPYAAHG 115

Query: 139 SGGSYALSAARALMSTQNSAEE 160
               Y LS            E+
Sbjct: 116 YAQYYCLSILDKHHHPDIDFEQ 137


>gi|298508226|pdb|1VSY|E Chain E, Proteasome Activator Complex
 gi|298508240|pdb|1VSY|S Chain S, Proteasome Activator Complex
 gi|298508442|pdb|3L5Q|J Chain J, Proteasome Activator Complex
 gi|298508456|pdb|3L5Q|V Chain V, Proteasome Activator Complex
          Length = 250

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     VV+  + + +    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGIATKEGVVLGVEKRATS-PLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIAD---KTI 117
                    Y ++      L +S  +LA               R     +LIA       
Sbjct: 93  RTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +       +  + +E
Sbjct: 153 YQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKE 195


>gi|166007290|pdb|2Z5C|C Chain C, Crystal Structure Of A Novel Chaperone Complex For Yeast
           20s Proteasome Assembly
 gi|166007293|pdb|2Z5C|F Chain F, Crystal Structure Of A Novel Chaperone Complex For Yeast
           20s Proteasome Assembly
          Length = 262

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     VV+  + + +    +   +  K+  + +    A  G    +       
Sbjct: 36  GSTAIGIATKEGVVLGVEKRATS-PLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHA 94

Query: 73  ERLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIAD---KTI 117
                    Y ++      L +S  +LA               R     +LIA       
Sbjct: 95  RTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDG 154

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +       +  + +E
Sbjct: 155 YQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKE 197


>gi|116789294|gb|ABK25190.1| unknown [Picea sitchensis]
          Length = 249

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 53/190 (27%), Gaps = 20/190 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+A + + +  +       RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDNIVLAVERKSTA-KLEDSRTVRKIVNLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   +               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGAPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNH 178
                          A G   +               +   ++A +A+    +      +
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIRDFLEKNYKETAGHETIKLAARALLEVVES---KGN 203

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 204 NIEIAVMTRD 213


>gi|6321692|ref|NP_011769.1| Pup2p [Saccharomyces cerevisiae S288c]
 gi|1709764|sp|P32379|PSA5_YEAST RecName: Full=Proteasome component PUP2; AltName: Full=Macropain
           subunit PUP2; AltName: Full=Multicatalytic endopeptidase
           complex subunit PUP2; AltName: Full=Proteinase YSCE
           subunit PUP2
 gi|14488809|pdb|1FNT|E Chain E, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|14488823|pdb|1FNT|S Chain S, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765703|pdb|1Z7Q|E Chain E, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|75765717|pdb|1Z7Q|S Chain S, Crystal Structure Of The 20s Proteasome From Yeast In
           Complex With The Proteasome Activator Pa26 From
           Trypanosome Brucei At 3.2 Angstroms Resolution
 gi|178847463|pdb|2ZCY|D Chain D, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847477|pdb|2ZCY|R Chain R, Yeast 20s Proteasome:syringolin A-Complex
 gi|178847505|pdb|3BDM|D Chain D, Yeast 20s Proteasome:glidobactin A-Complex
 gi|178847519|pdb|3BDM|R Chain R, Yeast 20s Proteasome:glidobactin A-Complex
 gi|323462939|pdb|3NZJ|D Chain D, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462953|pdb|3NZJ|R Chain R, Crystal Structure Of Yeast 20s Proteasome In Complex With
           Ligand 2a
 gi|323462967|pdb|3NZW|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462981|pdb|3NZW|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With 2b
 gi|323462995|pdb|3NZX|D Chain D, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|323463009|pdb|3NZX|R Chain R, Crystal Structure Of The Yeast 20s Proteasome In Complex
           With Ligand 2c
 gi|1323460|emb|CAA97282.1| PUP2 [Saccharomyces cerevisiae]
 gi|1502356|emb|CAA67615.1| PUP2 [Saccharomyces cerevisiae]
 gi|45270912|gb|AAS56837.1| YGR253C [Saccharomyces cerevisiae]
 gi|151943527|gb|EDN61838.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
 gi|190406741|gb|EDV10008.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256272662|gb|EEU07639.1| Pup2p [Saccharomyces cerevisiae JAY291]
 gi|259146754|emb|CAY80011.1| Pup2p [Saccharomyces cerevisiae EC1118]
 gi|285812444|tpg|DAA08344.1| TPA: Pup2p [Saccharomyces cerevisiae S288c]
 gi|323304754|gb|EGA58514.1| Pup2p [Saccharomyces cerevisiae FostersB]
 gi|323308926|gb|EGA62158.1| Pup2p [Saccharomyces cerevisiae FostersO]
 gi|323333402|gb|EGA74798.1| Pup2p [Saccharomyces cerevisiae AWRI796]
 gi|323337434|gb|EGA78684.1| Pup2p [Saccharomyces cerevisiae Vin13]
 gi|323348494|gb|EGA82739.1| Pup2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354899|gb|EGA86732.1| Pup2p [Saccharomyces cerevisiae VL3]
          Length = 260

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     VV+  + + +    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGIATKEGVVLGVEKRATS-PLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELA------KDWRMDKYLRNLEAMILIAD---KTI 117
                    Y ++      L +S  +LA               R     +LIA       
Sbjct: 93  RTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDG 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A +       +  + +E
Sbjct: 153 YQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKE 195


>gi|157876781|ref|XP_001686733.1| proteasome alpha 1 subunit [Leishmania major strain Friedlin]
 gi|68129808|emb|CAJ09114.1| putative proteasome alpha 1 subunit [Leishmania major strain
           Friedlin]
          Length = 263

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 51/168 (30%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +  + V+    VV+A   +  + +    +   KV  + +  +    +G  AD   L  
Sbjct: 31  NGSAAVGVKGRDFVVLAALKRSPVAEL--SSYQEKVFEIDEH-VGMSISGLVADGRVLAR 87

Query: 74  RLEKKL--EQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVIT 122
            L  +    +Y         ++A               K    +  ++   D+    +  
Sbjct: 88  FLRTECMNYRYMYSHGMPMNQMADMIGEKHQRHIQFSGKRPFGVGLLLAGYDRQGPHLYQ 147

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
            +      +    A+G     + +         T  + +E+   A+  
Sbjct: 148 TVPSGDVYDYKATAMGVRSQASRTYLEKHFERFTDCTLDELVTHALKA 195


>gi|301769857|ref|XP_002920355.1| PREDICTED: proteasome subunit alpha type-7-like [Ailuropoda
           melanoleuca]
          Length = 222

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ R   +
Sbjct: 7   VGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVINRARVE 64

Query: 79  LEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVITGMGD 126
            + +   +            +A   +            + A            +      
Sbjct: 65  CQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPS 124

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                    AIG G                  T +   ++  KA+
Sbjct: 125 GTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 169


>gi|1045471|gb|AAA80235.1| large multifunctional protease 7 [Homo sapiens]
          Length = 79

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 3/58 (5%)

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIVL 182
                 + + GSG +YA     +      S EE   + R+A++ A     Y+   + +
Sbjct: 1   TRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNM 58


>gi|148675357|gb|EDL07304.1| proteasome (prosome, macropain) subunit, alpha type 7, isoform
           CRA_a [Mus musculus]
          Length = 222

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ R   +
Sbjct: 7   VGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVINRARVE 64

Query: 79  LEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVITGMGD 126
            + +   +            +A   +            + A            +      
Sbjct: 65  CQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPS 124

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                    AIG G                  T +   ++  KA+
Sbjct: 125 GTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKAL 169


>gi|68074185|ref|XP_679007.1| proteasome subunit alpha type 2 [Plasmodium berghei strain ANKA]
 gi|56499642|emb|CAH98819.1| proteasome subunit alpha type 2, putative [Plasmodium berghei]
          Length = 235

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLERLE 76
           L +R    V+IA + + +  + + + +  K++++     I  AG  G          +  
Sbjct: 36  LGIRAKNGVIIATEKK-TPNELIEENSIYKIQQISDHIGIVYAGMPGDFRVLLKKARKEA 94

Query: 77  KKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDVL 128
            K             L++    + +++     +R     +LI   D     +        
Sbjct: 95  IKYSLQYGNEILVKELVKEIASIVQEFTQTGGVRPFGLSLLICGVDTYGYHLYQIDPSGC 154

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   IG      +S      ++    E+    A+
Sbjct: 155 YFNWMATCIGKDYQNNISFLEKRYNSDIEVEDAIHTAI 192


>gi|321260178|ref|XP_003194809.1| proteasome subunit alpha type 4 [Cryptococcus gattii WM276]
 gi|317461281|gb|ADV23022.1| proteasome subunit alpha type 4, putative [Cryptococcus gattii
           WM276]
          Length = 285

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 30/176 (17%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKAN-----------------ARKVRRLGKGN 56
           HA T+L V     + +A + +V+     +                      K+  L   N
Sbjct: 30  HAGTVLAVLCKEGIAMAAEKKVTGKLLDLSLTPGAGVGGEGTEAWMGGGGEKIFLL-NNN 88

Query: 57  IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLE 107
           I+AG AG ++DA +L+       +++               R+            LR   
Sbjct: 89  ILAGLAGITSDANSLVNFARNSAQRHLFSYDEDIPVEMLVQRLCDMKQGYTQFGGLRPFG 148

Query: 108 AMILIADKTITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +L           +                IG+  S A S  +   +   S E+
Sbjct: 149 VALLYVGWDPLYGFQLYQSDPSGNYSGWKATCIGANHSSATSLLKQDYNEDLSLED 204


>gi|291403944|ref|XP_002718318.1| PREDICTED: proteasome alpha 3 subunit isoform 2 [Oryctolagus
           cuniculus]
          Length = 248

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITLVITGMGDVL 128
              ++   + +    +        R+  Y+              +      +       +
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSVNDGAQLYMIDPSGV 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  AIG     A +    L   + +  ++ ++   I
Sbjct: 151 SYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 190


>gi|149737132|ref|XP_001496772.1| PREDICTED: similar to multicatalytic proteinase subunit K isoform 2
           [Equus caballus]
          Length = 248

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 54/160 (33%), Gaps = 7/160 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITLVITGMGDVL 128
              ++   + +             R+  Y+              +      +       +
Sbjct: 91  IAREEASNFRSNFGYDIPLKHLADRVAMYVHAYTLYSAVRPFGCSVNDGAQLYMIDPSGV 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  AIG     A +    L   + +  ++ ++   I
Sbjct: 151 SYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 190


>gi|21537234|gb|AAM61575.1| 20S proteasome subunit PAF1 [Arabidopsis thaliana]
          Length = 278

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +    Q+ + ++ RK+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSRSHVVLACVNKA---QSELSSHQRKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +         + R  V LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       +   +S E++ + A+
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAI 192


>gi|3421092|gb|AAC32062.1| 20S proteasome subunit PAF1 [Arabidopsis thaliana]
          Length = 278

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +    Q+ + ++ RK+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSRSHVVLACVNKA---QSELSSHQRKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +         + R  V LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       +   +S E++ + A+
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAI 192


>gi|297791703|ref|XP_002863736.1| 20S proteasome subunit PAF1 [Arabidopsis lyrata subsp. lyrata]
 gi|297309571|gb|EFH39995.1| 20S proteasome subunit PAF1 [Arabidopsis lyrata subsp. lyrata]
          Length = 276

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +    Q+ + ++ RK+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSRSHVVLACVNKA---QSELSSHQRKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +         + R  V LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       +   +S E++ + A+
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAI 192


>gi|30349206|gb|AAP22043.1| proteasome delta [Oreochromis mossambicus]
          Length = 47

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLG 38
           TTI+ V  DG VVI  D + + G
Sbjct: 23 GTTIMAVEYDGGVVIGADSRTTTG 46


>gi|321248708|ref|XP_003191212.1| 20S proteasome subunit [Cryptococcus gattii WM276]
 gi|317457679|gb|ADV19425.1| 20S proteasome subunit, putative [Cryptococcus gattii WM276]
          Length = 252

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 46/166 (27%), Gaps = 18/166 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVM--KANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            TT L ++    VVIA + +     +++   +   KV  +        ++G   D   L+
Sbjct: 36  GTTSLGIKATNGVVIATEKKA---PSILLDTSALEKVAPICPNIGFV-YSGMGPDFRVLV 91

Query: 73  ERLEKKLEQYPNQLL-----------RSSVELAKDWRMDKYLRNLEAMILIADKTITL-V 120
            +  K  + Y                 ++V              +  +I   D      +
Sbjct: 92  AKARKIAQAYWKVYGEYPPTKVLVQEVAAVMQKATQSGGVRPYGISVLIAGWDSHRGQSL 151

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                          AIG       +      +   S E+    A+
Sbjct: 152 WQIDPSGSYWAWKASAIGKNMVNGKTFLEKRYNDDLSLEDAIHTAL 197


>gi|94732607|emb|CAK03629.1| novel protein similar to vertebrate proteasome (prosome, macropain)
           subunit, alpha type 2 (PSMA2) [Danio rerio]
          Length = 214

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   L+ R  
Sbjct: 48  VGIKASNGVVLATEKK---QKSILYDEQSVHKVEPITKHIGMV-YSGMGPDYRVLVRRAR 103

Query: 77  KKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D+    +     
Sbjct: 104 KLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDP 163

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 164 SGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 204


>gi|318056046|ref|NP_001187506.1| proteasome subunit alpha type-2 [Ictalurus punctatus]
 gi|308323191|gb|ADO28732.1| proteasome subunit alpha type-2 [Ictalurus punctatus]
          Length = 234

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   L+ R  
Sbjct: 36  VGIKASNGVVLATEKK---QKSILYDEQSVHKVEPITKNIGMV-YSGMGPDYRVLVRRAR 91

Query: 77  KKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D+    +     
Sbjct: 92  KLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G     + +      +     E+    A+
Sbjct: 152 SSAYFAWKATAMGKNYVNSKTFLEKRYNEDLELEDAIHTAI 192


>gi|195382892|ref|XP_002050162.1| GJ21990 [Drosophila virilis]
 gi|194144959|gb|EDW61355.1| GJ21990 [Drosophila virilis]
          Length = 263

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +V+A + + +         + K+ RL +  +   AG    +    + 
Sbjct: 30  HAGTCLGILAEDGIVLAAECRSTNKLLDNAIPSEKIYRLNENMVCSVAGITSDANVLTSE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDSKYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAAR-ALMSTQ----NSAEEIARKAM 166
                         IG+    A+S  +  L        + A+++A K +
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAISMLKQELADKDNIKLDEAKDLAIKVL 198


>gi|168051540|ref|XP_001778212.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670425|gb|EDQ56994.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 249

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 60/192 (31%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+  + + +          RK+ +L +   +A FAG +ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTIVLGVEKKSTAKLQDA-RTVRKILKLDEHVSLA-FAGLTADARVLVN 86

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +          R    L + +     +R      LI           +
Sbjct: 87  RARIECQSHRLTVEDPVTVEYITRFIAGLQQKYTQSGGVRPFGISTLIVGFDPYTGVPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE--EIARKAMSIAADICVYTNH 178
                          A G   +          +  + AE  ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSVREFLEKNYTETSGAETVKLAVRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   +
Sbjct: 203 KNIEIAVMTKNE 214


>gi|119467888|ref|XP_001257750.1| proteasome subunit alpha type 3, putative [Neosartorya fischeri
           NRRL 181]
 gi|119405902|gb|EAW15853.1| proteasome subunit alpha type 3, putative [Neosartorya fischeri
           NRRL 181]
          Length = 278

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 55/201 (27%), Gaps = 45/201 (22%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  V+    ++K  A K       ++    AG   D    + 
Sbjct: 13  NGGTAIGIRCKDGVVLAVEKIVT--SKLLKPGANKKIATVDRHVGIVSAGLVPDGRHFVS 70

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTI------- 117
           R   +   + +         A   R+  Y         +R      ++            
Sbjct: 71  RARDEASSWRSVYKGPIPISALANRLGSYVQAYTLYSSVRPFGVTAIVGGWDSETELAVD 130

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                                   +       L       A G G   A +    L    
Sbjct: 131 GQVGTGPASGSGGKTSGAKVGGPGLYMIEPSGLYWGYYGAATGKGRQAAKAELEKL---D 187

Query: 156 NSAEEIA-RKAMSIAADICVY 175
            ++E++    A+  AA I +Y
Sbjct: 188 LASEKLTLLDAVREAARI-IY 207


>gi|6093780|sp|O73672|PSA2_CARAU RecName: Full=Proteasome subunit alpha type-2
 gi|3107927|dbj|BAA25915.1| proteasome alpha 2 subunit [Carassius auratus]
          Length = 234

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 56/161 (34%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  K+  + K   +  ++G   D   L+ R  
Sbjct: 36  VGIKASNGVVLATEKK---QKSILYDEQSVHKIEPITKHIGMV-YSGMGPDYRVLVRRAR 91

Query: 77  KKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D+    +     
Sbjct: 92  KLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 152 SGAYFAWKATAMGKSYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|157866477|ref|XP_001687630.1| proteasome alpha 3 subunit [Leishmania major strain Friedlin]
 gi|68125244|emb|CAJ02729.1| putative proteasome alpha 3 subunit [Leishmania major strain
           Friedlin]
          Length = 285

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQV------SLGQTVMKANARKVRRLGKGNII--AGFAGSSA 66
           A T++ V     VV+AG+  V      S        +  K+ ++ +      AG    + 
Sbjct: 31  AGTVIGVCTKDGVVLAGEKMVPHPLFDSENMQDKNISGEKMYKIAEHIGCSVAGVTSDAY 90

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTI 117
                   L     QY  Q   +  +L +    +K L              +++  D+  
Sbjct: 91  ALLNYAR-LSALRHQYTFQEPIAIEDLCRILCDEKQLYTQYGGVRPYGVSFLLVGWDRYY 149

Query: 118 TL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
              + +             AIG     A S  +       + E+   +A + +
Sbjct: 150 GYQLYSTEPSGDYSAWSAYAIGQNDQVAHSLLKKDWHENMTLEDGMLLALRVL 202


>gi|79314743|ref|NP_001030838.1| PAD1 (20s proteasome alpha subunit pad1); endopeptidase/ peptidase/
           threonine-type endopeptidase [Arabidopsis thaliana]
 gi|332645249|gb|AEE78770.1| proteasome subunit alpha type-7-A [Arabidopsis thaliana]
          Length = 243

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 47/168 (27%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+A + + +        +ARK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLAVEKKSTPKLQ-DSRSARKIVSLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   L               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ--NSAEEIARKAM 166
                          A G   +                   ++A +A+
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAGQETVKLAIRAL 194


>gi|2511586|emb|CAA73625.1| multicatalytic endopeptidase [Arabidopsis thaliana]
          Length = 267

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +    Q+ + ++ RK+ ++     +A  AG +AD   L   
Sbjct: 22  GSAAIGLRSRSHVVLACVNKA---QSELSSHQRKIFKVDDHIGVA-IAGLTADGRVLSRY 77

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +         + R  V LA        R  K    +  ++   D++   +   
Sbjct: 78  MRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYN 137

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       +  ++S E++ + A+
Sbjct: 138 CPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQESSKEDLIKDAI 182


>gi|305663895|ref|YP_003860183.1| proteasome endopeptidase complex, alpha subunit [Ignisphaera
           aggregans DSM 17230]
 gi|304378464|gb|ADM28303.1| proteasome endopeptidase complex, alpha subunit [Ignisphaera
           aggregans DSM 17230]
          Length = 243

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 18/173 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              T L ++ +  VV+  + + V+    VM  N  KV  +      A F+G   D   L+
Sbjct: 35  RGWTSLGIKSENGVVLIAERRKVAPLHDVM--NLEKVFAVDTHIG-ATFSGLGHDGRILI 91

Query: 73  ERLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VI 121
           +       ++            L R+  ++ + +     +R     ++I         ++
Sbjct: 92  DYARLIAVRHRLTFDEPVDVELLARTICDIKQAYTQQAGVRPFGVSLIIGGVDRKGAELV 151

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
                 L  +   +A G+G    ++      + + + EE   +  +A+  A +
Sbjct: 152 KTEPSGLYFKYYAVAAGAGEQAVINYLEKYYNVKTTVEEAIILGLRALRAALE 204


>gi|116778711|gb|ABK20969.1| unknown [Picea sitchensis]
          Length = 249

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 53/190 (27%), Gaps = 20/190 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+A + + +  +       RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDNIVLAVERKSTA-KLEDSRTVRKIVNLDNHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   +               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGAPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSIAADICVYTNH 178
                          A G   +               +   ++A +A+    +      +
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIRDFLEKNYKETAGHETIKLAARALLEVVES---KGN 203

Query: 179 NIVLETLKVG 188
           NI +  +   
Sbjct: 204 NIEIAVMTRD 213


>gi|70991357|ref|XP_750527.1| proteasome subunit alpha type 3 [Aspergillus fumigatus Af293]
 gi|66848160|gb|EAL88489.1| proteasome subunit alpha type 3, putative [Aspergillus fumigatus
           Af293]
 gi|159124083|gb|EDP49201.1| proteasome subunit alpha type 3, putative [Aspergillus fumigatus
           A1163]
          Length = 278

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 56/201 (27%), Gaps = 45/201 (22%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  V+    ++K  A K       ++    AG   D    + 
Sbjct: 13  NGGTAIGIRCKDGVVLAVEKIVT--SKLLKPGANKRIATVDRHVGIVSAGLVPDGRHFVS 70

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTI------- 117
           R   +   + +         A   R+  Y         +R      ++            
Sbjct: 71  RARDEASSWRSVYKGPIPISALANRLGSYVQAYTLYSSVRPFGVTAIVGGWDSETELAVD 130

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                                   +       L       A G G   A +    L    
Sbjct: 131 GQVGTGPASGSGGKTSDAKVGGPGLYMIEPSGLYWGYYGAATGKGRQAAKAELEKL---D 187

Query: 156 NSAEEIA-RKAMSIAADICVY 175
            ++E++   +A+  AA I +Y
Sbjct: 188 LASEKLTLLEAVREAARI-IY 207


>gi|195346263|ref|XP_002039685.1| GM15792 [Drosophila sechellia]
 gi|195585260|ref|XP_002082407.1| GD11553 [Drosophila simulans]
 gi|194135034|gb|EDW56550.1| GM15792 [Drosophila sechellia]
 gi|194194416|gb|EDX07992.1| GD11553 [Drosophila simulans]
          Length = 264

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 18/194 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +++A + + +         + K+ RL    +   AG    +    + 
Sbjct: 30  HAGTCLGILAEDGILLAAECRSTNKLLDSAVPSEKIYRLNDNMVCSVAGITSDANVLTSE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------SAEEIARKAMSIAADICVY 175
                         IG+    A+S  +  ++ ++        A+++A K +S+  D    
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAISMLKQELADKDNVKLTLADAKDLAIKVLSMTLDTTKL 209

Query: 176 TNHNIVLETLKVGD 189
           T   + + TL+  D
Sbjct: 210 TPEKVEMATLQRVD 223


>gi|83315915|ref|XP_730997.1| proteasome subunit alpha type 2 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23490901|gb|EAA22562.1| proteasome subunit alpha type 2 [Plasmodium yoelii yoelii]
          Length = 235

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLERLE 76
           L +R    V+IA + + +  + + + +  K++++     I  AG  G          +  
Sbjct: 36  LGIRAKNGVIIATEKK-TPNELIEETSIYKIQQISDHIGIVYAGMPGDFRVLLKKARKEA 94

Query: 77  KKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDVL 128
            K             L++    + +++     +R     +LI   D     +        
Sbjct: 95  IKYSLQYGNEILVKELVKEIASIVQEFTQTGGVRPFGLSLLICGVDAYGYHLYQIDPSGC 154

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   IG      +S      ++    E+    A+
Sbjct: 155 YFNWMATCIGKDYQNNISFLEKRYNSDIEVEDAIHTAI 192


>gi|57529899|ref|NP_001006491.1| proteasome subunit alpha type-3 [Gallus gallus]
 gi|53129746|emb|CAG31411.1| hypothetical protein RCJMB04_6b22 [Gallus gallus]
          Length = 255

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 54/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   +               R+  Y+                 +    D     + 
Sbjct: 91  IAREEASNFRTNYGYDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYDDDDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|316967586|gb|EFV51996.1| calcium-transporting ATPase type 2C member 1 [Trichinella spiralis]
          Length = 1196

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 46/172 (26%), Gaps = 19/172 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +R    VV   +  VS       +N R      K   +  F+G   D   L     
Sbjct: 791 TCVAIRGLDGVVFGVEKAVSSSLYEDYSNQRIATVADKIGFV--FSGLYPDGRALHHYAV 848

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL------------IADKTITLVITGM 124
           ++   Y               R+  Y+                     +      +    
Sbjct: 849 EEAISYHKSYRSDIPCGHLAERLSLYVHAYTLYGALRPFGCSVFLGSWSPLKGPELYLVE 908

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
                      AIG     A +    + ST     E+    ++ AA I +Y+
Sbjct: 909 PCGSMFGYRSWAIGRSHQAAKAEVDEMNSTTKPVSEL----INEAARI-IYS 955


>gi|194753670|ref|XP_001959133.1| GF12213 [Drosophila ananassae]
 gi|190620431|gb|EDV35955.1| GF12213 [Drosophila ananassae]
          Length = 265

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 57/171 (33%), Gaps = 18/171 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +++A + + +         + K+ RL +  +   AG    +    + 
Sbjct: 30  HAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNENMVCSVAGITSDANVLTSE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-------NSAEEIARKAM 166
                         IG+    A++  +  ++ +         A+++A K +
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAIAMLKQELADKENVQLKLEDAKDLAIKVL 200


>gi|68488749|ref|XP_711800.1| likely proteasome subunit Pup2 [Candida albicans SC5314]
 gi|68488786|ref|XP_711782.1| likely proteasome subunit Pup2 [Candida albicans SC5314]
 gi|241958940|ref|XP_002422189.1| proteasome subunit, putative [Candida dubliniensis CD36]
 gi|46433106|gb|EAK92560.1| likely proteasome subunit Pup2 [Candida albicans SC5314]
 gi|46433125|gb|EAK92578.1| likely proteasome subunit Pup2 [Candida albicans SC5314]
 gi|223645534|emb|CAX40193.1| proteasome subunit, putative [Candida dubliniensis CD36]
          Length = 255

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 50/170 (29%), Gaps = 16/170 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
            +T + +     V++  + +V+       +  + V      G  ++G    +        
Sbjct: 34  GSTAIGISTSEGVILGVEKRVTSSLLESSSIEKIVEIDHHIGCAMSGLTADARSMIDHAR 93

Query: 74  RLEKKLEQYPNQ------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTI-T 118
                   Y ++      L +S  +LA         + R+      +  +I   DK    
Sbjct: 94  VSSLTHNLYYDEDIGVESLTQSVCDLALRFGEGAGGEKRLMSRPFGVALLIAGVDKEKGP 153

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A +          + +E    A+ I
Sbjct: 154 QLYHAEPSGTFYRYEAKAIGSGSEGAQAELNNEYHKSLTLKEAELLALKI 203


>gi|328854946|gb|EGG04075.1| hypothetical protein MELLADRAFT_117140 [Melampsora larici-populina
           98AG31]
          Length = 249

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 51/164 (31%), Gaps = 14/164 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+ L ++    VVIA + + S    V  +   KV  +     +  ++G   D   L+ R
Sbjct: 33  GTSSLGIKATNGVVIATEKKTSS-ILVDDSMIEKVTSICPNIGMV-YSGMGPDYRILVTR 90

Query: 75  LEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             K  + Y            L +    + ++      +R     +LIA       + +  
Sbjct: 91  ARKIAQSYWKIYGEYPPTRLLTQEIATVMQEATQSGGVRPFGVSLLIAGWDEQRGSTLYQ 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG       +      +   S ++    A+
Sbjct: 151 VDPSGSFWPWKASAIGKNMVNGKTFLEKRYNDDLSLDDAIHTAI 194


>gi|70947333|ref|XP_743293.1| proteasome subunit alpha type 2 [Plasmodium chabaudi chabaudi]
 gi|56522719|emb|CAH76522.1| proteasome subunit alpha type 2, putative [Plasmodium chabaudi
           chabaudi]
          Length = 235

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 49/158 (31%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLERLE 76
           L +R    V+IA + + S  + + + +  K++++     I  AG  G          +  
Sbjct: 36  LGIRAKNGVIIATEKK-SPNELIEENSIYKIQQISDHIGIVYAGMPGDFRVLLKKARKEA 94

Query: 77  KKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDVL 128
            K             L++    + +++     +R     +LI   D     +        
Sbjct: 95  IKYSLQYGNEILVKELVKEIASIVQEFTQTGGVRPFGLSLLICGVDAYGYHLYQIDPSGC 154

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   IG      +S      ++    E+    A+
Sbjct: 155 YFNWMATCIGKDYQNNISFLEKRYNSDIEVEDAIHTAI 192


>gi|332225718|ref|XP_003262031.1| PREDICTED: proteasome subunit alpha type-7-like isoform 1 [Nomascus
           leucogenys]
          Length = 256

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 53/175 (30%), Gaps = 23/175 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-----IIAGFAGSSADA 68
             +T + +R   +VV+  + + S+ +   +   RK+  L         ++  F G +ADA
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADA 88

Query: 69  FTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKT 116
             ++ R   + + +   +            +A   +            + A      D  
Sbjct: 89  RVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDG 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
           I  +               AIG              +         A ++A KA+
Sbjct: 149 IPRLYQTDPSGNYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKAL 203


>gi|221057694|ref|XP_002261355.1| proteasome subunit [Plasmodium knowlesi strain H]
 gi|194247360|emb|CAQ40760.1| proteasome subunit, putative [Plasmodium knowlesi strain H]
          Length = 246

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 43/154 (27%), Gaps = 11/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERL 75
            + +     V++  D            N  K+ ++ K     +AG    +          
Sbjct: 34  TIGIITSEGVILGADKVFISKLIDKANNFEKIYKIDKHIFCGVAGLNADANILINQSRLY 93

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITGMGD 126
            ++     N      QL+    ++ + +     LR      LIA    K    +      
Sbjct: 94  TQRYLYNYNDVQPVSQLVVQICDIKQSYTQYGGLRPYGVSFLIAGYDVKEGYQLYHTDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                    AIG+    A S  +       + ++
Sbjct: 154 GNYSGWFATAIGTNNLTASSILKQEWKKDMTLQD 187


>gi|194858269|ref|XP_001969141.1| GG25255 [Drosophila erecta]
 gi|190661008|gb|EDV58200.1| GG25255 [Drosophila erecta]
          Length = 253

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 22/175 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            + T++ +R    VV+A +  ++       A  R         I    AG  AD   + +
Sbjct: 33  KSGTVIGIRGKDAVVLAVEKIITSQLYEPDAGGRIFTIEKN--IGMAVAGLVADGNYVAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----------ILIADK-TITLVI 121
              ++   Y  Q   +        R+  Y+                 +   D+     + 
Sbjct: 91  IARQEAANYRQQFEHAIPLKHLCDRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVY 175
                      G  A  SG +  L+      + T    +++ +     A +I +Y
Sbjct: 151 KIEPSGSS--FGYFACASGKAKQLAKTEMEKLKTDMKIDDLVK----SAGEI-IY 198


>gi|289742271|gb|ADD19883.1| 20S proteasome regulatory subunit alpha type PSMA4/PRE9 [Glossina
           morsitans morsitans]
          Length = 261

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  +++A + + +         + K+ +L    +    AG ++DA  L  
Sbjct: 30  HAGTCLGILAEDGILLAAECRNTNKLLDGSIFSEKIYKLNDNMV-CSVAGITSDANVLTN 88

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y      S            + + +      R     IL           + 
Sbjct: 89  ELRVIAQRYQFSYGESMPCEQLVSYLCDIKQAYTQYGGKRPFGVSILYMGWDKHYGYQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAMSIAADICVYT 176
                          IG+  S A+S  +  +S ++      A+++A K +S   D    T
Sbjct: 149 QSDPSGNYGGWKATCIGNNFSAAISMLKQELSEKDKITLEKAKDLAVKVLSKTLDTTKLT 208

Query: 177 NHNIVLETLKVGDE 190
           +  I + TL+  ++
Sbjct: 209 SEKIEMATLQRSND 222


>gi|255584242|ref|XP_002532859.1| proteasome subunit alpha type, putative [Ricinus communis]
 gi|223527396|gb|EEF29537.1| proteasome subunit alpha type, putative [Ricinus communis]
          Length = 229

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/158 (9%), Positives = 48/158 (30%), Gaps = 17/158 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA---GFAGSSADAFT 70
           ++ T++ ++    +V+  +  +   + ++  + R++  + + + +       G       
Sbjct: 33  NSGTVIGIKCKDGIVMGVEKLI-ASKMMLPGSNRRIHAVHRHSGMVERNCVYGEPIPVKE 91

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           L +R+   +                             ++   D+    +       +  
Sbjct: 92  LADRVASYVHL-------------CTLYWWLRPFGCGVILGGYDRDGPQLYMVEPSGISY 138

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                AIG G   A +    L  ++ +  E   +   I
Sbjct: 139 RYFGAAIGKGKQAAKTEIEKLKLSEMTCREGVIEVAKI 176


>gi|66358468|ref|XP_626412.1| proteasome subunit alpha type 1, NTN hydrolase [Cryptosporidium
           parvum Iowa II]
 gi|46227993|gb|EAK88913.1| proteasome subunit alpha type 1, NTN hydrolase [Cryptosporidium
           parvum Iowa II]
          Length = 288

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 48/151 (31%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T ++  R D +VV+A   + +     +    +K+ ++     +A  +G +ADA  +   
Sbjct: 61  GTAVVGARNDEIVVLACIKRSTS---RLAGYQKKLYKIDNHIGVA-VSGITADAKVICNY 116

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM-----------DKYLRNLEAMILIADKTITLVITG 123
           L  +   Y               R+            +    +  ++   D++   +   
Sbjct: 117 LRSECLNYSFTYDSPIPLNTLVNRLVLKSQVNTQEYGRRPFGVGLLLAGFDESGPHLFET 176

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                  E   +AIGS    + +        
Sbjct: 177 CPSGNCFEYYSIAIGSRSQASKTYLEKHFKE 207


>gi|326921206|ref|XP_003206853.1| PREDICTED: proteasome subunit alpha type-3-like [Meleagris
           gallopavo]
          Length = 281

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 59  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 116

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTIT-LVI 121
              ++   +               R+  Y+                M+   D+     + 
Sbjct: 117 IAREEASNFRTNYGYDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYDEDDGAQLY 176

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 177 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 223


>gi|3228662|gb|AAC23597.1| proteasome A type subunit [Cryptosporidium parvum]
 gi|323509365|dbj|BAJ77575.1| cgd2_2050 [Cryptosporidium parvum]
          Length = 259

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 48/151 (31%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T ++  R D +VV+A   + +     +    +K+ ++     +A  +G +ADA  +   
Sbjct: 32  GTAVVGARNDEIVVLACIKRSTS---RLAGYQKKLYKIDNHIGVA-VSGITADAKVICNY 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM-----------DKYLRNLEAMILIADKTITLVITG 123
           L  +   Y               R+            +    +  ++   D++   +   
Sbjct: 88  LRSECLNYSFTYDSPIPLNTLVNRLVLKSQVNTQEYGRRPFGVGLLLAGFDESGPHLFET 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                  E   +AIGS    + +        
Sbjct: 148 CPSGNCFEYYSIAIGSRSQASKTYLEKHFKE 178


>gi|255721909|ref|XP_002545889.1| proteasome component PUP2 [Candida tropicalis MYA-3404]
 gi|240136378|gb|EER35931.1| proteasome component PUP2 [Candida tropicalis MYA-3404]
          Length = 255

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 50/170 (29%), Gaps = 16/170 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
            +T + +     V++  + +V+       +  + V      G  ++G    +        
Sbjct: 34  GSTAIGISTSEGVILGVEKRVTSSLLESSSIEKIVEIDHHIGCAMSGLTADARSMIDHAR 93

Query: 74  RLEKKLEQYPNQ------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTI-T 118
                   Y ++      L +S  +LA         + R+      +  +I   DK    
Sbjct: 94  VSSLTHNLYYDEDIGVESLTQSVCDLALRFGEGAGGEKRLMSRPFGVALLIAGVDKEKGP 153

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A +          + +E    A+ I
Sbjct: 154 QLYHAEPSGTFYRYEAKAIGSGSEGAQAELNNEYHKSLTLKEAELLALKI 203


>gi|229366168|gb|ACQ58064.1| Proteasome subunit alpha type-3 [Anoplopoma fimbria]
          Length = 255

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 40/165 (24%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIAIRCRDGVVFGVEKLVLSKLYEQGSNKRIFNIDRHVGMAVAGLLADARPLSEVA 92

Query: 73  ERLEKKLEQYPNQ--------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI-TLVITG 123
                                   +                   ++   DK     +   
Sbjct: 93  RDEASSFRSSYGHDIPLKHLSDRVAMYVHTYTLYSAVRPFGCSFILGSYDKDDGPQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L   + +  E+ ++   I
Sbjct: 153 NPSGISHGYWGCAIGKAKQAAKTEIEKLQMKEMTCRELVKEVAKI 197


>gi|37747972|gb|AAH59539.1| Si:rp71-45k5.4 protein [Danio rerio]
          Length = 233

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   L+ R  
Sbjct: 35  VGIKASNGVVLATEKK---QKSILYDEQSVHKVEPITKHIGMV-YSGMGPDYRVLVRRAR 90

Query: 77  KKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D+    +     
Sbjct: 91  KLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDP 150

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 151 SGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 191


>gi|322794585|gb|EFZ17594.1| hypothetical protein SINV_01872 [Solenopsis invicta]
          Length = 64

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
          +    +G VVI  D + + G  V    A K+ R+         +GS+AD   + + +   
Sbjct: 1  MACEFNGGVVIGADSRGTTGAYVSNRFADKLTRVTDYIYCC-RSGSAADTQAIADIVAYH 59

Query: 79 LEQYP 83
          L  + 
Sbjct: 60 LGLHQ 64


>gi|194034199|ref|XP_001928042.1| PREDICTED: proteasome subunit alpha type-3 isoform 2 [Sus scrofa]
 gi|301754435|ref|XP_002913060.1| PREDICTED: proteasome subunit alpha type-3-like isoform 2
           [Ailuropoda melanoleuca]
          Length = 248

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITLVITGMGDVL 128
              ++   + +    +        R+  Y+              +      +       +
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSVNDGAQLYMIDPSGV 150

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                  AIG     A +    L   + +  ++ ++   I
Sbjct: 151 SYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 190


>gi|194881750|ref|XP_001974984.1| GG22074 [Drosophila erecta]
 gi|195486683|ref|XP_002091609.1| GE12155 [Drosophila yakuba]
 gi|190658171|gb|EDV55384.1| GG22074 [Drosophila erecta]
 gi|194177710|gb|EDW91321.1| GE12155 [Drosophila yakuba]
          Length = 264

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 18/194 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +++A + + +         + K+ RL    +   AG    +    + 
Sbjct: 30  HAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-------SAEEIARKAMSIAADICVY 175
                         IG+    A+S  +  ++ +         A+++A K +S+  D    
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAISMLKQELADKENVKLTLADAKDLAIKVLSMTLDTTKL 209

Query: 176 TNHNIVLETLKVGD 189
           T   + + TL+  D
Sbjct: 210 TPEKVEMATLQRVD 223


>gi|302761762|ref|XP_002964303.1| hypothetical protein SELMODRAFT_270401 [Selaginella moellendorffii]
 gi|302768627|ref|XP_002967733.1| hypothetical protein SELMODRAFT_145179 [Selaginella moellendorffii]
 gi|300164471|gb|EFJ31080.1| hypothetical protein SELMODRAFT_145179 [Selaginella moellendorffii]
 gi|300168032|gb|EFJ34636.1| hypothetical protein SELMODRAFT_270401 [Selaginella moellendorffii]
          Length = 250

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 46/168 (27%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+  + + +           K+  L +   +A FAG +ADA  L+ 
Sbjct: 31  KGNAAVGVRGTDTIVLGVEKKSTAKLQDA-RTVHKILSLDEHVALA-FAGLTADARVLVN 88

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD-------KTITLV 120
           R   + + +   +            +A   +       +    +               +
Sbjct: 89  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGISTLIIGFDPHTGAPSL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAM 166
                          A G   +            ++     ++A +A+
Sbjct: 149 YQTDPSGTFSAWKANATGRNSNSVREYLEKNYTETSGMDTVKLAVRAL 196


>gi|291230768|ref|XP_002735337.1| PREDICTED: proteasome alpha 4 subunit-like [Saccoglossus
           kowalevskii]
          Length = 277

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 15/192 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     V++A + +           + K+ +L        AG    +      
Sbjct: 43  HAGTCLGILASDGVLLAAERRNIHKLLDEVFFSEKIYKLTDDMACSVAGITSDANVLTNE 102

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ S  ++ + +      R     +L           +  
Sbjct: 103 LRLIAQRYLLQYQESIPCEQLVSSLCDMKQAYTQFGGKRPFGVSLLYMGWDKHYGYQLYQ 162

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEE---IARKAMSIAADICVYTNH 178
                         IG+  + A+S  +      + + +E   +A K ++   D+   T+ 
Sbjct: 163 SDPSGNYGGWKATCIGNNSAAAVSMLKQEYKEGEMNMKESLSLAIKILNKTLDLTKLTSE 222

Query: 179 NIVLETLKVGDE 190
            + + TL    +
Sbjct: 223 KVEIATLTRDGD 234


>gi|15220151|ref|NP_175158.1| PAF2; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|12229892|sp|O23712|PSA1B_ARATH RecName: Full=Proteasome subunit alpha type-1-B; AltName: Full=20S
           proteasome alpha subunit F-2; AltName: Full=Proteasome
           component 2B; AltName: Full=Proteasome subunit alpha
           type-6
 gi|12325400|gb|AAG52642.1|AC079677_6 20S proteasome subunit PAF2; 11103-9423 [Arabidopsis thaliana]
 gi|3421094|gb|AAC32063.1| 20S proteasome subunit PAF2 [Arabidopsis thaliana]
 gi|16323091|gb|AAL15280.1| At1g47250/F8G22_3 [Arabidopsis thaliana]
 gi|22655336|gb|AAM98260.1| At1g47250/F8G22_3 [Arabidopsis thaliana]
 gi|332194022|gb|AEE32143.1| proteasome subunit alpha type-1-B [Arabidopsis thaliana]
          Length = 277

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +    Q+ + ++ RK+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSRSHVVLACVNKA---QSELSSHQRKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +         + R  V LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       +  ++S E++ + A+
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQESSKEDLIKDAI 192


>gi|195638684|gb|ACG38810.1| proteasome subunit alpha type 1 [Zea mays]
          Length = 277

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 22/193 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            +  + +R     V+A   +  S     + +  RKV R+     +A  AG +AD   L  
Sbjct: 32  GSACVGLRSRTHAVLAAVNKPASE----LSSYQRKVFRVADHAGVA-LAGLTADGRVLSR 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD-----------KYLRNLEAMILIADKTITLVIT 122
            L  +   +               R+            K    +  ++   D++   +  
Sbjct: 87  FLRNECINHSFVYEAPLPVSRLALRLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYY 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADI---CVYTN 177
                   E    AIGS    A +            + E++ R A+S   +       + 
Sbjct: 147 NCPSGNYFEYQAFAIGSRSQAAKTFLERRFQGYDDYTPEQLVRDALSAVKETLQGEKLSG 206

Query: 178 HNIVLETLKVGDE 190
            N  +  +   D+
Sbjct: 207 SNCTVAIVGRKDD 219


>gi|50302577|ref|XP_451224.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640355|emb|CAH02812.1| KLLA0A05093p [Kluyveromyces lactis]
          Length = 262

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 21/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V  +  +V+  + +V+    +   +  K+  +      A  G    +       
Sbjct: 34  GSTAIGVVTNEGIVLGVEKRVTS-ALLESDSIEKIVEVDTHIGCAMSGLTADARSMLEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTIT 118
                  + Y ++      L +S  +LA         + R+      +  +I   D+   
Sbjct: 93  RVNAVTHDLYYDEKITVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIGGYDQEQG 152

Query: 119 L-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +               AIGSG   A S  +    +  +   AE +  K + 
Sbjct: 153 FQLYHAEPSGTFYRYNAKAIGSGSEGAQSELQNEWHSSLTLKEAESLVLKILK 205


>gi|322489631|emb|CBZ24889.1| putative proteasome alpha 3 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 285

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 22/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQV------SLGQTVMKANARKVRRLGKGNII--AGFAGSSA 66
           A T++ V     VV+AG+  V      +        +  K+ ++ +      AG    + 
Sbjct: 31  AGTVIGVCTKDGVVLAGEKMVPHPLFDNENMQDKNTSGEKMYKIAEHIGCSVAGVTSDAY 90

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKTI 117
                   L     QY  Q   +  +L +    +K L              +++  D+  
Sbjct: 91  ALLNYAR-LSALRHQYTFQEPMAIEDLCRILCDEKQLYTQYGGVRPYGVSFLLIGWDRYY 149

Query: 118 TL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
              + +             AIG     A S  +       + E+   +A + +
Sbjct: 150 GYQLYSTEPSGDYSAWSAYAIGQNDQVAHSLLKKDWHENMTLEDGMLLALRVL 202


>gi|226372602|gb|ACO51926.1| Proteasome subunit alpha type-3 [Rana catesbeiana]
          Length = 255

 Score = 45.0 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRIFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +             R+  Y+                 +    +     + 
Sbjct: 91  IAREEASNFRSNYGYDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYNEDDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       +IG     A +    L   + +  E+ ++   I
Sbjct: 151 MVDPSGISYGYWGCSIGKAKQAAKTEIEKLQMKEMTCREVVKEVAKI 197


>gi|327292072|ref|XP_003230744.1| PREDICTED: proteasome subunit beta type-9-like, partial [Anolis
           carolinensis]
          Length = 154

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 6/115 (5%)

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMA 136
           L      L+ ++  L K     KY   L A +++A  D      + G    +        
Sbjct: 23  LNMDEPPLVLAAATLVK-NISYKYKEELSAHLMVAGWDPRRGGQVYGTLGGMLTRQPFAI 81

Query: 137 IGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNHNIVLETLKVG 188
            GSG +Y      +         E     + A+++A      +   I L T+   
Sbjct: 82  GGSGSTYIYGYVDSAYKPGMDQVECRQFTKNAIALAMVRDGSSGGVIYLVTITKD 136


>gi|281346742|gb|EFB22326.1| hypothetical protein PANDA_009065 [Ailuropoda melanoleuca]
          Length = 166

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ R   +
Sbjct: 1   VGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVINRARVE 58

Query: 79  LEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTITLVITGMGD 126
            + +   +            +A   +            + A            +      
Sbjct: 59  CQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPS 118

Query: 127 VLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                    AIG G                  T +   ++  KA+
Sbjct: 119 GTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 163


>gi|241242109|ref|XP_002401910.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
           scapularis]
 gi|215496245|gb|EEC05885.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
           scapularis]
          Length = 154

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 2/98 (2%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T++L V+ DG V++A D     G      N  ++ ++    II G  G  AD   L   +
Sbjct: 43  TSVLGVKFDGGVMLAADLAGYYGSLAKLRNCPRLLKV-NDQIIVGAGGDYADYQFLKGVM 101

Query: 76  EKK-LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILI 112
           ++K + +            +    + + + N  +    
Sbjct: 102 DQKVISEECLNDGFKLKPKSLYSWLTRVMYNRRSKFDP 139


>gi|68064745|ref|XP_674356.1| 20S proteasome beta 4 subunit [Plasmodium berghei strain ANKA]
 gi|56492872|emb|CAH94481.1| 20S proteasome beta 4 subunit, putative [Plasmodium berghei]
          Length = 214

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 41/182 (22%), Gaps = 31/182 (17%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ ++    +++  D         +K + +       GN      GS  D     E + 
Sbjct: 3   TLIGLKGKDFIILGADTYSINSIIKLKNDDKTKFYDINGNKCLLLGGSIGDRIQFGEFIR 62

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------------------------- 108
           K +  Y  Q   S    +  +   K L                                 
Sbjct: 63  KNVHLYQYQNSTSLYVKSFAYFTRKNLAYYLRRNPYEVNCLIAGYDDVRYKTLKKINNYN 122

Query: 109 MILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKA 165
                 K    +               A G G     +          + EE   I +K 
Sbjct: 123 FFYYCLKDGYQLYWCDYLSNMDAINKGAHGYGAYLVNAILDKYYHENMNLEEALVIFKKC 182

Query: 166 MS 167
             
Sbjct: 183 FE 184


>gi|195359260|ref|XP_002045330.1| GM24383 [Drosophila sechellia]
 gi|195582008|ref|XP_002080820.1| GD10046 [Drosophila simulans]
 gi|194127360|gb|EDW49403.1| GM24383 [Drosophila sechellia]
 gi|194192829|gb|EDX06405.1| GD10046 [Drosophila simulans]
          Length = 253

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 50/173 (28%), Gaps = 18/173 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
            + T++ +R    VV+A +  ++       A  R        G  +AG          + 
Sbjct: 33  KSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNYVADIA 92

Query: 73  ERLEKKLEQYPNQLLR------SSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITG 123
            +      Q   Q +               + +   +R     I++A         +   
Sbjct: 93  RQEAANYRQQFEQAIPLKHLCDRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLYKI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVY 175
                    G  A  SG +  L+      + T    +E+       A +I +Y
Sbjct: 153 EPSGSS--FGYFACASGKAKQLAKTEMEKLKTDMRTDELVE----SAGEI-IY 198


>gi|15239061|ref|NP_199093.1| PAF1; endopeptidase/ peptidase/ threonine-type endopeptidase
           [Arabidopsis thaliana]
 gi|17380545|sp|P34066|PSA1A_ARATH RecName: Full=Proteasome subunit alpha type-1-A; AltName: Full=20S
           proteasome alpha subunit F-1; AltName: Full=Proteasome
           30 kDa subunit; AltName: Full=Proteasome component 2A;
           Short=AtPSM30; AltName: Full=Proteasome subunit alpha
           type-6; AltName: Full=Protein ARSENIC TOLERANCE 5
 gi|14030713|gb|AAK53031.1|AF375447_1 AT5g42790/MJB21_17 [Arabidopsis thaliana]
 gi|166830|gb|AAA16326.1| proteasome [Arabidopsis thaliana]
 gi|10177282|dbj|BAB10635.1| 20S proteasome subunit PAF1 [Arabidopsis thaliana]
 gi|16648704|gb|AAL25544.1| AT5g42790/MJB21_17 [Arabidopsis thaliana]
 gi|21360479|gb|AAM47355.1| AT5g42790/MJB21_17 [Arabidopsis thaliana]
 gi|332007481|gb|AED94864.1| proteasome subunit alpha type-1-A [Arabidopsis thaliana]
          Length = 278

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +    Q+ + ++ RK+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSRSHVVLACVNKA---QSELSSHQRKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +         + R  V LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       +   +S E++ + A+
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAI 192


>gi|300120888|emb|CBK21130.2| unnamed protein product [Blastocystis hominis]
          Length = 240

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 53/159 (33%), Gaps = 13/159 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V     VVIA + +V     + +++ +K+  L +   +  ++G   D   + ++ +KK
Sbjct: 35  VGVTATNGVVIATERKVPT-ILIEESSIQKILPLSENIGVV-YSGMGPDFRIIAKKAQKK 92

Query: 79  LEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMI--LIADKTITLVITGMGDV 127
              Y            L++    + +++     +R     +  +  D+    +       
Sbjct: 93  ASTYYATFHEQIPCTILVQEIASIMQEYTQSGGVRPFGISLLVIGYDEDKPRLYQVDPSG 152

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   AIG       S      S     E+    AM
Sbjct: 153 AYFSWYATAIGKNYISGKSFLEKRWSEDMELEDAVHTAM 191


>gi|218884638|ref|YP_002429020.1| proteasome subunit alpha [Desulfurococcus kamchatkensis 1221n]
 gi|218766254|gb|ACL11653.1| proteasome subunit alpha [Desulfurococcus kamchatkensis 1221n]
          Length = 246

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 15/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              T + +R     ++A + + ++  Q + +   +K+ ++      A +AG + D   L+
Sbjct: 34  RGWTTIGIRTKSASIVAAEKRKIT--QLIDEKAIQKIFKIDDHIG-ASYAGMAGDGRILI 90

Query: 73  ERLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIA--DKTITLVI 121
                +   +       +          ++ + +     +R     ++ A  D+  T + 
Sbjct: 91  SYAINQALLHRFYYDEPALVEYITKLVCDVKQAYTQHAGVRPFGVAMIFAGVDEKGTQLF 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                         AIG   +  +              E  + A+   A I
Sbjct: 151 MTEPSGRYLSYYATAIGEKSNNVIEFLEKNYKYDLDTSESLKLAIQALAGI 201


>gi|58264190|ref|XP_569251.1| 20S proteasome subunit [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134107926|ref|XP_777345.1| hypothetical protein CNBB1470 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260035|gb|EAL22698.1| hypothetical protein CNBB1470 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223901|gb|AAW41944.1| 20S proteasome subunit, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 252

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 45/164 (27%), Gaps = 14/164 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT L ++    VVIA + + S    +  +   KV  +        ++G   D   L+ +
Sbjct: 36  GTTSLGIKATNGVVIATEKK-SPSILLDTSALEKVAPICPNIGFV-YSGMGPDFRVLVAK 93

Query: 75  LEKKLEQYPNQLL-----------RSSVELAKDWRMDKYLRNLEAMILIADKTITL-VIT 122
             K  + Y                 ++V              +  +I   D      +  
Sbjct: 94  ARKIAQAYWKVYGEYPPTKVLVQEVAAVMQKATQSGGVRPYGISVLIAGWDSHRGQSLWQ 153

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG       +      +   S E+    A+
Sbjct: 154 IDPSGSYWAWKASAIGKNMVNGKTFLEKRYNDDLSLEDAIHTAL 197


>gi|239790366|dbj|BAH71748.1| ACYPI005345 [Acyrthosiphon pisum]
          Length = 138

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 33/89 (37%), Gaps = 3/89 (3%)

Query: 103 LRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE-- 160
           +     ++   D +   + +        +   +++GSG   A+S   +  +   + EE  
Sbjct: 1   MFQPALILGGIDNSGAHLYSIYPHGSIDKLPYISMGSGSMAAISELESRWNENLTEEEGM 60

Query: 161 -IARKAMSIAADICVYTNHNIVLETLKVG 188
            +A  A+       + +  N+ L  +K  
Sbjct: 61  KLACDAILGGVFNDLGSGSNVDLCVIKKD 89


>gi|224045017|ref|XP_002196657.1| PREDICTED: similar to putative proteasome (prosome macropain)
           subunit alpha type 2 [Taeniopygia guttata]
          Length = 247

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 50/160 (31%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 49  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 105

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++     +      QL++    + +++     +R     +LI   ++    +      
Sbjct: 106 LAQQYYLVYHEPIPTAQLVQRIASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 165

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 166 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 205


>gi|114052504|ref|NP_001040344.1| proteasome 25 kDa subunit [Bombyx mori]
 gi|95102572|gb|ABF51224.1| proteasome 25 kDa subunit [Bombyx mori]
          Length = 234

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/161 (10%), Positives = 47/161 (29%), Gaps = 9/161 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T + ++    VVIA + +         +  +     G  G + +G         T   
Sbjct: 32  GGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQAR 91

Query: 74  RLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKT--ITLVITGMG 125
           ++ ++     +      QL++    + +++     +R     +LI         +     
Sbjct: 92  KMAQQYFLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWEEGRPYLFQCDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G   +   +      +     ++    A+
Sbjct: 152 SGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAI 192


>gi|17136420|ref|NP_476691.1| proteasome 29kD subunit [Drosophila melanogaster]
 gi|12643270|sp|P18053|PSA4_DROME RecName: Full=Proteasome subunit alpha type-4; AltName:
           Full=PROS-Dm29; AltName: Full=Proteasome 29 kDa subunit
 gi|7291219|gb|AAF46651.1| proteasome 29kD subunit [Drosophila melanogaster]
 gi|19527527|gb|AAL89878.1| RE23862p [Drosophila melanogaster]
 gi|220948176|gb|ACL86631.1| Pros29-PA [synthetic construct]
 gi|220957410|gb|ACL91248.1| Pros29-PA [synthetic construct]
          Length = 264

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 59/170 (34%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +++A + + +         + K+ RL    +   AG    +    + 
Sbjct: 30  HAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM- 124
           L  + ++ +          QL+    ++ + +      R     +L              
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQ 149

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
            D      G  A   G ++  +   +++  + + +E  +  ++ A D+ +
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAI--SMLKQELADKENVKLTLADAKDLAI 197


>gi|192453540|ref|NP_001122146.1| si:rp71-45k5.4 [Danio rerio]
 gi|190336823|gb|AAI62266.1| Si:rp71-45k5.4 protein [Danio rerio]
 gi|190339360|gb|AAI62255.1| Si:rp71-45k5.4 protein [Danio rerio]
          Length = 234

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   L+ R  
Sbjct: 36  VGIKASNGVVLATEKK---QKSILYDEQSVHKVEPITKHIGMV-YSGMGPDYRVLVRRAR 91

Query: 77  KKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D+    +     
Sbjct: 92  KLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 152 SGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|1220186|gb|AAC47280.1| testes-specific proteasome subunit alpha-type [Drosophila
           melanogaster]
          Length = 249

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 21/171 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+  +   S+ +       RK+  L +   +A FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGANCVVLGVEK-SSVSEMQEDRTVRKISMLDRHVALA-FAGLTADARILIN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRN-------------LEAMILIADKTITLV 120
           R + + + +                + +  +                   + AD +   +
Sbjct: 88  RGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQVNGRPSFGISCLIGGIDADGSA-RL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
                  +  E    A G   +          S         A ++A +A+
Sbjct: 147 FHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRAL 197


>gi|281350262|gb|EFB25846.1| hypothetical protein PANDA_012136 [Ailuropoda melanoleuca]
          Length = 210

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 52/169 (30%), Gaps = 15/169 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMS 167
                         IG+  + A+S  +           SA  +A K ++
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLN 198


>gi|238880089|gb|EEQ43727.1| proteasome component PUP2 [Candida albicans WO-1]
          Length = 253

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 18/170 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     V++  + +V+       +  + V      +I    +G +ADA ++++ 
Sbjct: 34  GSTAIGISTSEGVILGVEKRVTSSLLESSSIEKIVEI--DHHIGCAMSGLTADARSMIDH 91

Query: 75  -----LEKKLEQYPNQLLRSSVELAKDWRMD--------KYLRNLEAMILIADKTI---T 118
                L   L    +  + S  +   D               R     +LIA        
Sbjct: 92  ARVSSLTHNLYYDEDIGVESLTQSVCDALRFGEGAGGKRLMSRPFGVALLIAGVDKEKGP 151

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
            +               AIGSG   A +          + +E    A+ I
Sbjct: 152 QLYHAEPSGTFYRYEAKAIGSGSEGAQAELNNEYHKSLTLKEAELLALKI 201


>gi|76160964|gb|ABA40445.1| proteasome, alpha subunit-like protein [Solanum tuberosum]
          Length = 249

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 53/192 (27%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSVRKIVNLDNHIALAC-AGLKADARVLVN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   +               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSGQETVKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEVAVMTKED 214


>gi|66773056|ref|NP_001019612.1| proteasome alpha 2 subunit [Danio rerio]
 gi|66267588|gb|AAH95382.1| Proteasome (prosome, macropain) subunit, alpha type, 2 [Danio
           rerio]
          Length = 234

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 56/161 (34%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   L+ R  
Sbjct: 36  VGIKASNGVVLATEKK---QKSILYDEQSVHKVEPITKHIGMV-YSGMGPDYRVLVRRAR 91

Query: 77  KKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D+    +     
Sbjct: 92  KLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 152 SGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|58332218|ref|NP_001011257.1| proteasome (prosome, macropain) subunit, alpha type, 3 [Xenopus
           (Silurana) tropicalis]
 gi|56270164|gb|AAH87567.1| proteasome (prosome, macropain) subunit, alpha type, 3 [Xenopus
           (Silurana) tropicalis]
 gi|89270406|emb|CAJ81511.1| proteasome (prosome macropain) subunit alpha type 3 [Xenopus
           (Silurana) tropicalis]
          Length = 255

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 53/167 (31%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRIFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   +               R+  Y+                 +    +     + 
Sbjct: 91  IAREEASNFRANYGYDIPLKHLSDRVAMYVHAYTLYSAVRPFGCSFMLGSYNEDDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L     +  ++ ++   I
Sbjct: 151 MVDPSGISYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRDVVKEVAKI 197


>gi|77551900|gb|ABA94697.1| Proteasome subunit alpha type 5, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 184

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +V+    +  ++  K+  + +    A  +G  ADA TL+E 
Sbjct: 34  GSTAIGLKTKDGVVLAVEKRVTS-PLLEPSSVEKIMEIDEHIGCA-MSGLIADARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSV 91
              + + +         
Sbjct: 92  ARVETQNHRFSYGEPMT 108


>gi|196013498|ref|XP_002116610.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190580886|gb|EDV20966.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 232

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/157 (10%), Positives = 45/157 (28%), Gaps = 9/157 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERLEK 77
           + ++     V+A + +         +  +  R   K G + +G             +L +
Sbjct: 35  IGIKVANGAVLATEKKYKSQLYDENSTHKVARITDKIGMVYSGMGPDYRVLLRKARKLAQ 94

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLE 129
           + +          QL+     + +++     +R     +L+A        +         
Sbjct: 95  EYQMKYQDSIPTSQLVEKVASVMQEYTQSGGVRPFGVSLLMAGTGDEGPYLYQCDPSGAF 154

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 A+G       +      + +   E+    A+
Sbjct: 155 FAWKATALGKNHVNGKTFLEKRYNEEMELEDAIHTAI 191


>gi|207109038|ref|ZP_03243200.1| ATP-dependent protease peptidase subunit [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 26

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 18/26 (69%)

Query: 160 EIARKAMSIAADICVYTNHNIVLETL 185
           ++  +++ IA D+C+YTN NI +  L
Sbjct: 1   KLVEESLKIAGDLCIYTNTNIKILEL 26


>gi|332796512|ref|YP_004458012.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
 gi|332694247|gb|AEE93714.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
          Length = 235

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T L ++    VV+ G+ +    Q +   +  KV  L    +   FAG ++D   L++
Sbjct: 28  KGWTTLGIKTKSAVVVLGEKK-KASQLLDLDSIEKVFLLDDH-VGCSFAGLASDGRVLID 85

Query: 74  RLEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
                  Q+            L +   ++ + +     +R     ++I   D  +T +  
Sbjct: 86  YARNSALQHRLIYDEPITVDYLTKLISDVKQMYTQHGGVRPFGVALIIGGVDNGVTKLFM 145

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSI 168
                       +AIG GG  A            + E+   +A  A+  
Sbjct: 146 TEPSGQFMPYQAVAIGQGGYTATEYLEKNYKEDLNVEDTILLALNALKS 194


>gi|221057692|ref|XP_002261354.1| proteasome subunit [Plasmodium knowlesi strain H]
 gi|194247359|emb|CAQ40759.1| proteasome subunit, putative [Plasmodium knowlesi strain H]
          Length = 241

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 28/195 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
                + ++     V+A + +      + K        K+ +L + N +A FAG +ADA 
Sbjct: 28  KGGCAVAIKSSNFAVLAVEKK-----NIPKLQNPRTTEKLIKLDEHNCLA-FAGLNADAR 81

Query: 70  TLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTI 117
            L+ +   + ++Y   +         +  +AK  +   +   +    +        +   
Sbjct: 82  VLVNKTRLECQRYFLNMDEPAPVDYIAKYVAKVQQKFTHRGGVRPFGIATLIAGFKNNKE 141

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +       +       AIG                     +   +A KA+    ++  
Sbjct: 142 ICIYQTEPSGIYASWKAQAIGKNAKVVQEFLEKNYQENMEQNDCLLLAMKAIFEVVEL-- 199

Query: 175 YTNHNIVLETLKVGD 189
            ++ NI +  L   +
Sbjct: 200 -SSKNIEVALLTEKE 213


>gi|167517217|ref|XP_001742949.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778048|gb|EDQ91663.1| predicted protein [Monosiga brevicollis MX1]
          Length = 193

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 44/158 (27%), Gaps = 10/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII-----AGFAGSSADAFTLLE 73
           L +     V++A D         MK++  K  +L    ++      G   +  D      
Sbjct: 5   LGLVGADFVLVAADTAQIRSVVRMKSDLDKTMKLTDKTMMLLAGSVGACSNFGDLMAKNI 64

Query: 74  RLEKKLEQYPNQLLRSSVE----LAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
           +L      Y +     +      LA   R  +  +    +          +         
Sbjct: 65  KLNGIRNGYDHSPAECANFVRKSLADALRTREAYQVNLLLGGYDAHDGPELYYIDYFGAM 124

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
            +    A G G  + L+          + EE A+  M 
Sbjct: 125 AKVPFGAHGYGSFFTLATLDRHYKEGMNFEE-AKDVMR 161


>gi|156101263|ref|XP_001616325.1| 20S proteasome alpha subunit D2 [Plasmodium vivax SaI-1]
 gi|148805199|gb|EDL46598.1| 20S proteasome alpha subunit D2, putative [Plasmodium vivax]
          Length = 241

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 62/195 (31%), Gaps = 28/195 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
                + ++     V+A + +      + K        K+ +L + N +A FAG +ADA 
Sbjct: 28  KGGCAVAIKSSNFAVLAVEKK-----NIPKLQNPRTTEKLIKLDEHNCLA-FAGLNADAR 81

Query: 70  TLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTI 117
            L+ +   + ++Y   +         +  +AK  +   +   +    +        +   
Sbjct: 82  VLVNKTRLECQRYFLNMDEPAPVDYIAKYVAKVQQKFTHRGGVRPFGIATLIAGFKNNKE 141

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICV 174
             +       +       AIG                     +   +A KA+    ++  
Sbjct: 142 ICIYQTEPSGIYASWKAQAIGKNAKVVQEFLEKNYQENMEQNDCLLLAMKAIFEVVEL-- 199

Query: 175 YTNHNIVLETLKVGD 189
            ++ NI +  L   +
Sbjct: 200 -SSKNIEVALLTEKE 213


>gi|323448884|gb|EGB04777.1| hypothetical protein AURANDRAFT_55034 [Aureococcus anophagefferens]
          Length = 259

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 20/176 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A T++ ++    VV+  +  +     +  +N R         +    AG +AD   ++ 
Sbjct: 33  NAGTVVGMKCKDGVVLGVEKVMLSKMLLPSSNRRVATVSAHAGV--AQAGLAADGRQVVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL----------EAMILIADKTI---TLV 120
           R  ++ + Y               R+ +Y+              + ++ A         +
Sbjct: 91  RAREECDNYEEVYGIPIPPTVLAQRLSEYVHYFTIHGALRPFGTSTMIAAYDEREKAHQL 150

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
                  +       A+G G   A S    L  T  +     R A+   A + +YT
Sbjct: 151 YVLEPTGVCLRYFGAALGKGRQSAKSEIEKLDLTTLT----CRDALKEIAKM-IYT 201


>gi|125811518|ref|XP_001361901.1| GA21704 [Drosophila pseudoobscura pseudoobscura]
 gi|54637077|gb|EAL26480.1| GA21704 [Drosophila pseudoobscura pseudoobscura]
          Length = 262

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +++A + + +         + K+ RL +  +   AG    +      
Sbjct: 30  HAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNENMVCSVAGITSDANVLTAE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARKAM 166
                         IG+    A+S  +  ++ +       A+++A K +
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAISMLKQELADKPSIKLEEAKDLAVKVL 198


>gi|195170248|ref|XP_002025925.1| GL10139 [Drosophila persimilis]
 gi|194110789|gb|EDW32832.1| GL10139 [Drosophila persimilis]
          Length = 262

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +++A + + +         + K+ RL +  +   AG    +      
Sbjct: 30  HAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNENMVCSVAGITSDANVLTAE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARKAM 166
                         IG+    A+S  +  ++ +       A+++A K +
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAISMLKQELADKPSIKLEEAKDLAVKVL 198


>gi|296243063|ref|YP_003650550.1| proteasome endopeptidase complex subunit alpha [Thermosphaera
           aggregans DSM 11486]
 gi|296095647|gb|ADG91598.1| proteasome endopeptidase complex, alpha subunit [Thermosphaera
           aggregans DSM 11486]
          Length = 250

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 14/169 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T L VR     V+  + Q  +     +   +KV ++     ++ FAG + D   L++
Sbjct: 34  RGWTTLGVRTRNAAVVVAEKQ-KISPLTDEKAIQKVFKVDDHIGVS-FAGMAGDGRILID 91

Query: 74  RLEKK--LEQYPNQLLRSSVELAKDWRMDKYLRNLEAM---------ILIADKTITLVIT 122
               +  + ++          L K     K      A           +  D+  T +  
Sbjct: 92  YAIHQALIHKFYYDEPIPVEYLTKLVCDVKQAYTQHAGVRPFGVSMIFVGVDEKGTQLFM 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKA-MSIAA 170
                       +AIG              S   SA E  +   ++IA+
Sbjct: 152 TEPSGRYLSYYGVAIGEKSGNVTEFLEKNYSYDLSARETVKLGILAIAS 200


>gi|157134457|ref|XP_001663312.1| proteasome subunit alpha type [Aedes aegypti]
 gi|108870476|gb|EAT34701.1| proteasome subunit alpha type [Aedes aegypti]
          Length = 253

 Score = 44.6 bits (104), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 53/162 (32%), Gaps = 17/162 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++     V+    + S     + +  +K+  +     I+  AG +ADA  L   
Sbjct: 32  GSATVGLKNKDYAVLIALKRASSE---LSSYQKKIISIDDHLGIS-IAGITADARILSRY 87

Query: 75  LEKKLEQY------PNQLLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           + ++   Y         + R    +         R D+    +  ++   D     +   
Sbjct: 88  MRQECLNYKYSYDDNYPVGRLIANVGNKMQVCTQRYDRRPYGVGLLVAGYDDQGPHIYQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIAR 163
                  +   M+IGS    A +     ++     S EE+ R
Sbjct: 148 CPSANFFDCKAMSIGSRSQSARTYLEKHLNEFPDCSKEELIR 189


>gi|326475532|gb|EGD99541.1| proteasome subunit alpha [Trichophyton tonsurans CBS 112818]
          Length = 269

 Score = 44.6 bits (104), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 51/168 (30%), Gaps = 17/168 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + V+ +G+VV+  + + ++     +    K+  +     +A FAG +ADA  L+++
Sbjct: 31  GTCAVGVKGEGIVVLGCEKRSAMKLQDTRITPSKIGLIDNHVCLA-FAGLNADARILVDK 89

Query: 75  LEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLVI 121
              + + +   +            +A   +       +    +               + 
Sbjct: 90  ARVEAQSHRLTVEDPVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDNGDKTPRLY 149

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                 +       AIG                    E   ++  K++
Sbjct: 150 QTEPSGIYSAWKANAIGRSSKTVREFLERNHKDGIDREATIQLTIKSL 197


>gi|115400876|ref|XP_001216026.1| proteasome component C1 [Aspergillus terreus NIH2624]
 gi|114189967|gb|EAU31667.1| proteasome component C1 [Aspergillus terreus NIH2624]
          Length = 311

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 7/144 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++    ++K  A K       ++    +G   D    + 
Sbjct: 33  NGGTAIGIRCKDGVVLAVEKIIT--SKLLKPGANKRIATVDRHVGIVSSGLVPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R   +   +           A   R+  Y+   +A  L +      +   +G        
Sbjct: 91  RARDEASSWRGVYKSPIPVSALSNRLGSYV---QAYTLYSSVRPFGITAIIGGWDSEAEL 147

Query: 134 VMAI--GSGGSYALSAARALMSTQ 155
            +    GSG +           + 
Sbjct: 148 AVDGQVGSGPTSGAGGKVEGAKSG 171


>gi|167531997|ref|XP_001748183.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773303|gb|EDQ86944.1| predicted protein [Monosiga brevicollis MX1]
          Length = 236

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 47/164 (28%), Gaps = 13/164 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLL 72
             T L ++     VIA + + +    V   +  KV +L +  G + +G            
Sbjct: 31  GNTSLGIKAIDGAVIATEKK-TPSHLVDSESFFKVEKLTETAGMVYSGMGPDKRVLLAKA 89

Query: 73  ERLEKKLEQYPNQL---LRSSVELAKDWRMDKYLRNLEAM-------ILIADKTITLVIT 122
            +L +       +     R   ++A+  +       +           L  D   T +  
Sbjct: 90  RKLAQAYFLTYREHIPVRRLVQQIAQVMQEYTQKGGVRPFGVSLLVIGLNPDGKTTGLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A +      + +   E+    A+
Sbjct: 150 IDPSGSYFAWKAAAIGKNMVNAKTFLEKRYNEELELEDAVHTAI 193


>gi|294952707|ref|XP_002787424.1| proteasome subunit alpha type 3, NTN hydrolase fold, putative
           [Perkinsus marinus ATCC 50983]
 gi|239902396|gb|EER19220.1| proteasome subunit alpha type 3, NTN hydrolase fold, putative
           [Perkinsus marinus ATCC 50983]
          Length = 261

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 17/174 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T L +     VV A +  +     V   N +++  + +   +A  +G  ADA  ++E
Sbjct: 33  NGGTALALCCKDGVVFANEKFLLSKMLVPGTN-KRIFPVDRHATLA-ISGLVADAKQIVE 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------------ILIADKTITLVI 121
           R  ++  QY               R+  ++                   +  +     + 
Sbjct: 91  RAREECSQYKQVYSTPIPGPVLADRVAMFMHMYTLYWSVRPFGSTVLLGIYDEVEGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADI 172
                    +   +A+G G     +    L+    S   +     +A   AA I
Sbjct: 151 GIDPSGTAIKFKGIAVGKGRQAGRTEVEKLLPVDASIPYVNLTCEEAKFYAAKI 204


>gi|221059707|ref|XP_002260499.1| Proteosome subunit alpha type 1 [Plasmodium knowlesi strain H]
 gi|193810572|emb|CAQ41766.1| Proteosome subunit alpha type 1, putative [Plasmodium knowlesi
           strain H]
          Length = 269

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/167 (10%), Positives = 56/167 (33%), Gaps = 18/167 (10%)

Query: 15  ATTILTVRKDGVVVIAG-DGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            T  + ++    VV+ G   ++S     +  +  K+ ++     +   +G ++DA  L +
Sbjct: 32  GTCAVAIKSKDFVVVCGLKKRISK----LSFHQEKLFKIDDYIGV-TMSGITSDAKVLTK 86

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-KTITLVITG 123
            +  +   +           +L++   +  +        R     +++A       +   
Sbjct: 87  YMRNECLSHKFLFDENINIEKLVKKVADKYQQNTQKSSRRAFGVGLIVAGYSKEPHIFET 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
             +    E   ++ G+    + +     +     +S EE+    +  
Sbjct: 147 KPNGSYFEYTALSFGARSHASKTYLEKNVHLFENSSLEELTLHCLKA 193


>gi|17737405|ref|NP_523532.1| proteasome 35kD subunit [Drosophila melanogaster]
 gi|130837|sp|P12881|PSA1_DROME RecName: Full=Proteasome subunit alpha type-1; AltName:
           Full=PROS-Dm35; AltName: Full=Proteasome 35 kDa subunit
 gi|8382|emb|CAA33520.1| unnamed protein product [Drosophila melanogaster]
 gi|8388|emb|CAA44173.1| 35 KDa proteasome subunit [Drosophila melanogaster]
 gi|7297622|gb|AAF52875.1| proteasome 35kD subunit [Drosophila melanogaster]
          Length = 279

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++     V+    + +     +    RK+  +     I+  AG +ADA  L   
Sbjct: 32  GTATVGLKNKDYAVLVALCKPTSE---LSDTQRKIIPIDDHLGIS-IAGLTADARVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +       + R    L         R D+    +  ++   D+    +   
Sbjct: 88  LRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
                       +IGS    A +     ++    +S +EI R  +  
Sbjct: 148 TPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRA 194


>gi|255513306|gb|EET89572.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 231

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 12/160 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T + +  +  VV+     +S    ++ +  +K+ ++      A ++G  +D   ++ 
Sbjct: 32  KGATSIGMVAEEGVVLLAHKNISE-PLIIPSTVQKIFKVDSFIG-ATYSGLVSDGLHIVN 89

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIADKT-ITLVITG 123
            +  K + +            + R   E  +       LR     +++        +   
Sbjct: 90  LMRTKTQTHRMVYDETESVETMAREVSEEMQMATQYGGLRPYAISLILGGIDTEKRLFEV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                       AIG G   A            S EE  +
Sbjct: 150 EPGASFSGYKADAIGVGKKIAEEMLVKDYKDSMSVEESIK 189


>gi|46124851|ref|XP_386979.1| hypothetical protein FG06803.1 [Gibberella zeae PH-1]
          Length = 235

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 39/146 (26%), Gaps = 12/146 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +      +IA       G T++K    K R L K  ++A F+G + D     E +++ 
Sbjct: 10  LGITGKDFTIIAASKAAMRGATILKTTDDKTRALNKHTLLA-FSGEAGDTVQFAEYIQRN 68

Query: 79  LEQYPNQLLRSSVELAKD-----------WRMDKYLRNLEAMILIADKTITLVITGMGDV 127
            + Y  +        A                  Y  NL    +        +       
Sbjct: 69  AQLYSMRNESDLSPSALAHFVRGELATSLRSRKPYNVNLLMGGVDPITGKPSLYWLDYLA 128

Query: 128 LEPENGVMAIGSGGSYALSAARALMS 153
              E    A G              +
Sbjct: 129 SLAEVPYAAHGYAQYVFPEIRLERHN 154


>gi|297846920|ref|XP_002891341.1| hypothetical protein ARALYDRAFT_473874 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337183|gb|EFH67600.1| hypothetical protein ARALYDRAFT_473874 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 277

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 17/165 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R    VV+A   +    Q+ + ++ RK+ ++     +A  AG +AD   L   
Sbjct: 32  GSAAIGLRSRSHVVLACVNKA---QSELSSHQRKIFKVDDHIGVA-IAGLTADGRVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELA-----KDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +         + R  V LA        R  K    +  ++   D++   +   
Sbjct: 88  MRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                  E    AIGS    A +       +  ++S E++ + A+
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFESFQESSREDLIKDAI 192


>gi|50289341|ref|XP_447101.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526410|emb|CAG60034.1| unnamed protein product [Candida glabrata]
          Length = 250

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 50/192 (26%), Gaps = 29/192 (15%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + + S     +     KV  L                  + + 
Sbjct: 31  GVTSLGIKATNGVVIATEKK-SSSPLALTETLSKVSLLTPDIGAVYSGIGPDYRVLVDKS 89

Query: 75  LEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
            +     Y                  ++ ++      +R     +L+A         +  
Sbjct: 90  RKVAHTNYKRIYGEYPPTKLLVSEIAKIMQEATQSGGVRPFGVSLLVAGYDEHNGYSLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA---------ADIC 173
                        +IG G + A +      + +   E+    A+ IA          +  
Sbjct: 150 VDPSGSYFPWKATSIGKGSTAAKTFLEKRWNNELELED----AIHIALLTLKESVEGE-- 203

Query: 174 VYTNHNIVLETL 185
            +    I +  +
Sbjct: 204 -FNGDTIEIAVI 214


>gi|242786362|ref|XP_002480789.1| proteasome subunit alpha type 3, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218720936|gb|EED20355.1| proteasome subunit alpha type 3, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 294

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 7/142 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++    ++K  A K       NI    AG   D    + 
Sbjct: 33  NGGTAIGIRCKDGVVLAVEKLIT--SKLLKPGANKRIATVDRNIGIVSAGLVPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R   +   +           A   R+  Y+   +A  L +      V + +G        
Sbjct: 91  RARDEAASWRKTYKGPIPTSALANRLGGYV---QAYTLYSSVRPFGVTSIVGGWDSEAEL 147

Query: 134 VMAI--GSGGSYALSAARALMS 153
            +    G+G S         + 
Sbjct: 148 SVDGQVGTGPSVGAGGKAKDLK 169


>gi|68303561|ref|NP_653263.2| proteasome subunit alpha type-7-like isoform 1 [Homo sapiens]
 gi|108936006|sp|Q8TAA3|PSA7L_HUMAN RecName: Full=Proteasome subunit alpha type-7-like
 gi|119621619|gb|EAX01214.1| proteasome (prosome, macropain) subunit, alpha type, 8, isoform
           CRA_a [Homo sapiens]
 gi|167887669|gb|ACA06053.1| proteasome subunit alpha type 7-like protein variant 2 [Homo
           sapiens]
          Length = 256

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 23/175 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-----IIAGFAGSSADA 68
             +T + +R   +VV+  + + S+ +   +   RK+  L         ++  F G +ADA
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADA 88

Query: 69  FTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKT 116
             ++ R   + + +   +            +A   +            + A      D  
Sbjct: 89  RVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDG 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
           I+ +               AIG              +         A ++A KA+
Sbjct: 149 ISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKAL 203


>gi|195470819|ref|XP_002087704.1| GE18166 [Drosophila yakuba]
 gi|194173805|gb|EDW87416.1| GE18166 [Drosophila yakuba]
          Length = 215

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/163 (11%), Positives = 46/163 (28%), Gaps = 14/163 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TIL V+    V++A D   +     +     K  R+    +++   G   D     + + 
Sbjct: 3   TILGVKGADFVLLASDTMKAKSVMWLDDEKTKTHRITDYCMMSTI-GDGGDCLQFSDFIL 61

Query: 77  KKLEQYPNQLLRSSVELAK---------DWRMDKYLRNLEAMILIADKTI-TLVITGMGD 126
           + ++ Y                       +        +  ++   D T    +      
Sbjct: 62  RNMDLYKVTNGYDLTVRGAVHFIRSNLSAYLRCNMKYQVALLVGGFDSTTGPELHYIDQF 121

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
                      G+G ++         ++      A ++ +K +
Sbjct: 122 GNSVPIRYGGHGAGINFCTPIFEEFYTSHMDSQAAYDVIKKCV 164


>gi|3152562|gb|AAC17043.1| Similar to proteosome component, micropain (multi-catalytic
           endopeptidase complex) subunit Y7, gb|X56731 from S.
           cerevisiae. EST gb|Z25719 comes from this gene
           [Arabidopsis thaliana]
          Length = 225

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 64/191 (33%), Gaps = 32/191 (16%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+ +K++ L        ++G   D   L+ +
Sbjct: 32  GQTSLGIKASNGVVIATEKKLPS-ILVDEASVQKIQHLTPNIG-TVYSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------------------QLLRSSVELAKDWRMDKYLRNLEAMILIA 113
             K+ EQY                       QL+R +  + +++     +R     +L+A
Sbjct: 90  SRKQAEQYLRLYKVIFNIFWRLLLQEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVA 149

Query: 114 --DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM----- 166
             D     +               A+G   S A +      +     ++    A+     
Sbjct: 150 GYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKE 209

Query: 167 --SIAADICVY 175
                A+I  Y
Sbjct: 210 GVLTPAEIDDY 220


>gi|115634853|ref|XP_001198316.1| PREDICTED: similar to proteasome subunit beta-type
           [Strongylocentrotus purpuratus]
          Length = 104

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 11/100 (11%)

Query: 90  SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-ENGVMAIGSGGSYALSAA 148
           +  +A       Y R                   +  + E  E   ++ G GG       
Sbjct: 3   TSAIAAMLSTILYYRRFFPY---------YTYNILAGLDEEGELPTISSGIGGKNQEGWV 53

Query: 149 RALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           +  +     A  + +     AA+  +YT   IVL  L   
Sbjct: 54  KEPIPVDK-AVALVKDVFISAAERDIYTGDGIVLHVLTKD 92


>gi|50546575|ref|XP_500757.1| YALI0B11374p [Yarrowia lipolytica]
 gi|49646623|emb|CAG83004.1| YALI0B11374p [Yarrowia lipolytica]
          Length = 219

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 12/154 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           +L +R  G V++A     + G +V+K    K R L     +  + G + D     E +  
Sbjct: 4   VLGLRIKGGVLVATSKAATRGISVIKVGDDKTRELNPNT-LMAYTGEAGDTVQFAEYIMA 62

Query: 78  KLEQYPNQLLRSSVELAKD----WRMDKYLRNLEAMILIAD-------KTITLVITGMGD 126
               Y  +        A       ++ K LR+ +   +               +      
Sbjct: 63  NTRLYGIRHDIELSPSAVASFTRNQLAKALRSRKPYQVNVLIAGFDPKTEKPTLNLIDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
               E    A G    Y +S          + EE
Sbjct: 123 ASNVELPYAAHGYAAYYTMSLLDRHWKEGMTQEE 156


>gi|294940963|ref|XP_002782944.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|294944435|ref|XP_002784254.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|239895126|gb|EER14740.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
 gi|239897288|gb|EER16050.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
           50983]
          Length = 236

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 18/162 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLERLE 76
           L ++    VV+A + +    QT++      +R++      I   FAG   D   +L R  
Sbjct: 35  LGIKAKNGVVLATEKKF---QTILAEE-DSIRKVDNFTNRIGCVFAGMPPDFRVILSRGR 90

Query: 77  KKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITGM 124
           K+ +QY           QL R    + +++     +R     ++IA         +    
Sbjct: 91  KQAQQYWCTYEDEIPVRQLTREVANVMQEFTQSGGVRPFGISLMIAGWDETEGPQLYQVD 150

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                      AIG   + A S      S     E+    A+
Sbjct: 151 PSGAFFGWKASAIGKNYANAKSFLEKRYSEDIELEDAIHTAI 192


>gi|195475158|ref|XP_002089851.1| GE21995 [Drosophila yakuba]
 gi|194175952|gb|EDW89563.1| GE21995 [Drosophila yakuba]
          Length = 253

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 22/175 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            + T++ +R    VV+A +  +S       A  R         I    AG  AD   + +
Sbjct: 33  KSGTVIGIRGKDAVVLAVEKIISSKLYEPDAGGRIFTIEKN--IGMAVAGLVADGNYVAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----------ILIADK-TITLVI 121
              ++   Y  Q   +        R+  Y+                 +   D+     + 
Sbjct: 91  IARQEAANYRQQFEHAIPLKHLCDRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVY 175
                      G  A  SG +  L+      + T    +++ +     A +I +Y
Sbjct: 151 KIEPSGSS--FGYFACASGKAKQLAKTEMEKLKTDMKIDDLVK----SAGEI-IY 198


>gi|225706328|gb|ACO09010.1| Proteasome subunit alpha type 2 [Osmerus mordax]
          Length = 234

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  
Sbjct: 36  VGIKATNGVVLATEKK---QKSILYDEQSVHKVEPITKHIGMV-YSGMGPDYRVLLRRAR 91

Query: 77  KKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D+    +     
Sbjct: 92  KLAQQYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDHPYLFQSDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 152 SGAYFAWKATAMGKSYVNGKTFLEKRYNNDLELEDAIHTAI 192


>gi|239792329|dbj|BAH72518.1| ACYPI004276 [Acyrthosiphon pisum]
          Length = 119

 Score = 44.2 bits (103), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ ++ +  V+IA D   +    VMK +  K   +    ++ G  G + D     E + 
Sbjct: 3   TVIGIKFNDFVLIATDMTAAHSIMVMKDDEDKTYNITNN-VVMGVTGEAGDVPRFAEYIT 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK 101
           + ++ Y  +        A      K
Sbjct: 62  QNVKLYRMRNGYDLSIPAIATFTRK 86


>gi|225684609|gb|EEH22893.1| proteasome subunit alpha type-2 [Paracoccidioides brasiliensis
           Pb03]
          Length = 249

 Score = 44.2 bits (103), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 51/167 (30%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
             T L ++    VV+A + + S    +   +  K+  +     +            + + 
Sbjct: 30  GVTALGIKATNGVVLATEKK-SSSPLIDPPSLSKISLITPDIGMVYSGMGPDYRVLVDKA 88

Query: 74  ------RLEKKLEQYP--NQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVIT 122
                   ++   +YP    L++    + ++      +R     +LIA   D     +  
Sbjct: 89  RKTSHTAYKRIYNEYPPTRILVQDVARVVQEATQSGGVRPYGVSLLIAGWDDGGGPSLYQ 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                        AIG   + A +      +     E+    A+ IA
Sbjct: 149 VDPSGSYFPWKATAIGKSATSAKTFLEKRYTEGLELED----AIHIA 191


>gi|302848036|ref|XP_002955551.1| 20S proteasome alpha subunit B [Volvox carteri f. nagariensis]
 gi|300259174|gb|EFJ43404.1| 20S proteasome alpha subunit B [Volvox carteri f. nagariensis]
          Length = 235

 Score = 44.2 bits (103), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L +     VVIA + ++     V +   +K+  +     +  ++G   D   L+ R
Sbjct: 32  GATSLGISATDGVVIATEKKLPS-ALVDETTVQKIMTITPSIGVV-YSGMGPDFRVLVRR 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K  + Y           QL+R +  + +++     +R     +++A  D     +   
Sbjct: 90  ARKTAQAYYQTYKEHIPVAQLVRETAAVMQEFTQTGGVRPFGVSLMMAGYDDNGPQLYQI 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG   + A +      S +   E+    A+
Sbjct: 150 DPSGSYFAWKASAIGKNMTNAKAFLEKRYSEEVGIEDAVHTAL 192


>gi|8380|emb|CAA36555.1| unnamed protein product [Drosophila melanogaster]
          Length = 264

 Score = 44.2 bits (103), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 58/170 (34%), Gaps = 11/170 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +++A + + +         + K+ R     +   AG    +    + 
Sbjct: 30  HAGTCLGILAEDGILLAAECRSTNKLLDSAIPSEKIYRRNDNMVCSVAGITSDANVLTSE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM- 124
           L  + ++ +          QL+    ++ + +      R     +L              
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQ 149

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
            D      G  A   G ++  +   +++  + + +E  +  ++ A D+ +
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAI--SMLKQELADKENVKLTLADAKDLAI 197


>gi|225431090|ref|XP_002264052.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297734987|emb|CBI17349.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score = 43.8 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 51/191 (26%), Gaps = 22/191 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+  + + +          RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTIVLGVEKKSTAKLQ-DSRTVRKIVNLDDHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +               L + +     +R      LI           +
Sbjct: 87  RARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGVPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETVKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVG 188
            NI +  +   
Sbjct: 203 KNIEIAVMTRE 213


>gi|50307089|ref|XP_453523.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642657|emb|CAH00619.1| KLLA0D10373p [Kluyveromyces lactis]
          Length = 250

 Score = 43.8 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 15/166 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T L ++    +VIA + + S    +    ++        G + +G             
Sbjct: 31  GVTSLGIKSTNGIVIATEKKSSSSLALPDTVSKVSLITPDIGAVYSGMGPDFRVLVDKAR 90

Query: 74  RLE----KKLEQYPNQLLRSSVELAKDWR---MDKYLRNLEAMILIADKTIT---LVITG 123
           ++     K++            E+AK  +       +R     +L+A         +   
Sbjct: 91  KVAHTNYKRIYGEYPPTKILVSEVAKIMQEATQSGGVRPFGVSVLVAGHDEHNGFGLYQV 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                       AIG G S A +      + +   E+    A+ IA
Sbjct: 151 DPSGAYFPWKATAIGKGSSAAKTFLEKRWNEELELED----AIHIA 192


>gi|156387508|ref|XP_001634245.1| predicted protein [Nematostella vectensis]
 gi|156221326|gb|EDO42182.1| predicted protein [Nematostella vectensis]
          Length = 234

 Score = 43.8 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/161 (9%), Positives = 43/161 (26%), Gaps = 9/161 (5%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
               + ++    VV+A + +            +        G I +G             
Sbjct: 31  GGPSVGIKASNGVVLAAEKKQKSVLYDDSTICKVEMVTKNIGMIYSGMGPDYRVLVRHAR 90

Query: 74  RLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           ++ ++            QL++    + +++     +R     +L+A  D     +     
Sbjct: 91  KIAQQYYLMYKENIPTSQLVQRLASVMQEYTQSGGVRPFGVSLLVAGWDDDRPYLFQCDP 150

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 151 SGAYFAWKATAMGKNYVNGKTFLEKRYNESLELEDAIHTAI 191


>gi|111223877|ref|YP_714671.1| hypothetical protein FRAAL4482 [Frankia alni ACN14a]
 gi|111151409|emb|CAJ63124.1| hypothetical protein; putative N-terminal nucleophile
           aminohydrolase domain [Frankia alni ACN14a]
          Length = 176

 Score = 43.8 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 47/153 (30%), Gaps = 13/153 (8%)

Query: 28  VIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL 87
           +I GD     G ++      KV R   G  I GF  S      L   L   + Q  +   
Sbjct: 1   MIGGDSAGVAGWSITVRADTKVFR--NGEFIMGFTDSFRMGQLLRYSLVPPVPQDWDLDR 58

Query: 88  RSSVELAKDWRMDKYLRNL---------EAMILIADKTITLVITGMGDVLEPENGVMAIG 138
             + +     R                   + L+  +     I     +    +   A+G
Sbjct: 59  FMATDFIAVVRDCLRDGGFARNDSGNESGGLFLVGIRGHLYRIDSDYQIGRSVDDYYAVG 118

Query: 139 SGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
           SG  YA  +  +       AE+  + A+  AA 
Sbjct: 119 SGDEYACGSLHSTR--GLDAEQRVQLALEAAAH 149


>gi|225428005|ref|XP_002278162.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297744621|emb|CBI37883.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score = 43.8 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 44/168 (26%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+  + + +          RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTIVLGVEKKSTAKLQ-DSRTVRKIVNLDDHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           R   + + +   +            +A   +       +    L            +  +
Sbjct: 87  RARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPYTGVPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAM 166
                          A G   +             +     ++A +A+
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGQETVKLAIRAL 194


>gi|3334299|sp|O24030|PSA7_SOLLC RecName: Full=Proteasome subunit alpha type-7; AltName: Full=20S
           proteasome alpha subunit D; AltName: Full=20S proteasome
           subunit alpha-4
 gi|2315211|emb|CAA74725.1| proteasome alpha subunit [Solanum lycopersicum]
          Length = 259

 Score = 43.8 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSVRKIVNLDDHIALAC-AGLKADARVLVN 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIAD--KTITLV 120
           +   + + +   +            +    +               +I+  D    +  +
Sbjct: 87  KARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAM 166
                          A G   +             +     ++A +A+
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSGQETVKLAIRAL 194


>gi|124810483|ref|XP_001348890.1| proteosome subunit alpha type 1, putative [Plasmodium falciparum
           3D7]
 gi|23497792|gb|AAN37329.1| proteosome subunit alpha type 1, putative [Plasmodium falciparum
           3D7]
          Length = 254

 Score = 43.8 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 59/168 (35%), Gaps = 20/168 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANA--RKVRRLGKGNIIAGFAGSSADAFTLL 72
            T  + ++    VV++G     L + + K +    K+ ++     I+  +G ++DA  L 
Sbjct: 32  GTCAVAIKSKDYVVVSG-----LKKCISKLSFPQEKIFKIDDYIGIS-MSGITSDAKVLT 85

Query: 73  ERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLE-AMILIADKTITLVIT 122
           + ++ +   +            L+RS  +  +        R     +++ A      +  
Sbjct: 86  KFMQNECLSHKFLYNENINIESLVRSVADKYQKNTQKSSKRAFGVGLMIAAYHNEPCIFE 145

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
              +    E   ++ G+    + +     +    + S EE+    +  
Sbjct: 146 TRPNGSYFEYDALSFGARSHASKTYLEKNLHLFEECSLEELILHCLKA 193


>gi|67599218|ref|XP_666272.1| proteasome A type subunit [Cryptosporidium hominis TU502]
 gi|54657238|gb|EAL36045.1| proteasome A type subunit [Cryptosporidium hominis]
          Length = 259

 Score = 43.8 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 48/151 (31%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T ++  R + +VV+A   + +     +    +K+ ++     +A  +G +ADA  +   
Sbjct: 32  GTAVVGARNNEIVVLACIKRSTSK---LAGYQKKLYKIDNHIGVA-VSGITADAKVICNY 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRM-----------DKYLRNLEAMILIADKTITLVITG 123
           L  +   Y               ++            +    +  ++   D++   +   
Sbjct: 88  LRSECLNYSFTYDSPMPLNTLVNKLVLKSQVNTQEYGRRPFGVGLLLAGFDESGPHLFET 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                  E   +AIGS    + +        
Sbjct: 148 CPSGNCFEYYSIAIGSRSQASKTYLEKHFKE 178


>gi|25143215|ref|NP_491520.2| Proteasome Alpha Subunit family member (pas-3) [Caenorhabditis
           elegans]
 gi|12229924|sp|Q9N599|PSA4_CAEEL RecName: Full=Proteasome subunit alpha type-4; AltName:
           Full=Proteasome subunit alpha 3
 gi|18652622|gb|AAF60416.2| Proteasome alpha subunit protein 3 [Caenorhabditis elegans]
          Length = 250

 Score = 43.8 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 57/200 (28%), Gaps = 24/200 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTL 71
           HA T L +     +V+A + +             KV RL       +AG    +      
Sbjct: 30  HAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINH 89

Query: 72  LERLEKKLEQYPNQLLRS---SVELAKDWRMDKYLRNLEAM-----ILIADKTITL-VIT 122
           L            + +        L  + +    +            +  DK     +  
Sbjct: 90  LRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS-TQN-SAEEIARKAM------SIAA---D 171
                         IGS    A++  +          A+++A K +       +A+   +
Sbjct: 150 SDPSGNYTGWKATCIGSNHQAAVTLLKQEYKSPNLEEAKQLAIKVLWKTLDVKLASEKVE 209

Query: 172 ICVYT--NHNIVLETLKVGD 189
           + V T  +   VLE L   +
Sbjct: 210 MAVLTRRDGKTVLEELTTKE 229


>gi|316962733|gb|EFV48750.1| proteasome component C5 [Trichinella spiralis]
          Length = 126

 Score = 43.8 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 1/47 (2%)

Query: 3   VMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVM-KANARK 48
            + D+      +  T   +     V I+GD ++S    V+    A K
Sbjct: 80  ALSDRFNPYTENGGTCAGIAGKDFVNISGDTRLSASSMVVLSRTAPK 126


>gi|114653231|ref|XP_001164664.1| PREDICTED: proteasome alpha 3 subunit isoform 4 [Pan troglodytes]
          Length = 229

 Score = 43.8 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  +I ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 197


>gi|242039179|ref|XP_002466984.1| hypothetical protein SORBIDRAFT_01g017905 [Sorghum bicolor]
 gi|241920838|gb|EER93982.1| hypothetical protein SORBIDRAFT_01g017905 [Sorghum bicolor]
          Length = 65

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 22/43 (51%)

Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG 60
          ++ ++     ++A D + S G T+   +   ++ +GK ++I  
Sbjct: 9  VIALKYKDGAIMACDTRSSYGSTLRYKSVEHIKAVGKHSLIGT 51


>gi|320165353|gb|EFW42252.1| proteasome subunit alpha type-3 [Capsaspora owczarzaki ATCC 30864]
          Length = 249

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 46/165 (27%), Gaps = 12/165 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           ++ T + +R    VV   +  +        +N R        G  IAG    +       
Sbjct: 33  NSGTAIALRVKDGVVFGVEKLILSKLYEPSSNRRIFTVDRHVGVAIAGLVADARQVVNRA 92

Query: 73  ERLEKKLEQYPNQLLRS---SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
                    + N  + S   S  LA   ++      +      A             ++E
Sbjct: 93  REESANYRSFYNSPIPSQVLSQRLAGFVQVYTLYGAVRPFGCTALVGSYDSDGAHLHMIE 152

Query: 130 PENGVM-----AIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
           P          A G G   A +    L  ++ +  E      +IA
Sbjct: 153 PSGVCWGYHGCATGKGKQAAKTEIEKLNMSEMTCREAV---FAIA 194


>gi|224045021|ref|XP_002198678.1| PREDICTED: putative proteasome (prosome macropain) subunit alpha
           type 2 [Taeniopygia guttata]
 gi|327274993|ref|XP_003222258.1| PREDICTED: proteasome subunit alpha type-2-like [Anolis
           carolinensis]
 gi|197128517|gb|ACH45015.1| putative proteasome (prosome macropain) subunit alpha type 2
           [Taeniopygia guttata]
 gi|197128518|gb|ACH45016.1| putative proteasome (prosome macropain) subunit alpha type 2
           [Taeniopygia guttata]
          Length = 234

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 50/160 (31%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++     +      QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYHEPIPTAQLVQRIASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|20197515|gb|AAD15467.2| unknown protein [Arabidopsis thaliana]
          Length = 142

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 13/35 (37%)

Query: 24  DGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII 58
           D  V++  D + + G  V   N  K+  +      
Sbjct: 108 DDGVILGADTRATEGPIVADKNCGKIHYMAPNIYC 142


>gi|160331745|ref|XP_001712579.1| prsB4 [Hemiselmis andersenii]
 gi|159766028|gb|ABW98254.1| prsB4 [Hemiselmis andersenii]
          Length = 193

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 13/164 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           TI+++   G  + A D        + K N  K   +GK   +A  +G   D     + L+
Sbjct: 3   TIISLNGKGFGICAIDTLSFKSFLITKTNLNKYIEIGKNKFLA-VSGYPGDVIQFTDFLQ 61

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNL-EAMILIADKTITLVITGMGDVLEPENG-- 133
           K ++ Y  +   +    +    + K L +      +  + T+       G  L   +   
Sbjct: 62  KTIQLYTLKTGLTLSTRSVANCIRKELSDCLRKNPININLTLIGFDKIYGSSLYFIDYLG 121

Query: 134 ------VMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSI 168
                     G       S        +     A EI ++  +I
Sbjct: 122 SLQRMDFCVQGHSSLILSSFLDRYYKQKMNLQEAIEIIKRCANI 165


>gi|20810439|gb|AAH29402.1| Proteasome (prosome, macropain) subunit, alpha type, 3 [Homo
           sapiens]
 gi|123984451|gb|ABM83571.1| proteasome (prosome, macropain) subunit, alpha type, 3 [synthetic
           construct]
 gi|123998415|gb|ABM86809.1| proteasome (prosome, macropain) subunit, alpha type, 3 [synthetic
           construct]
          Length = 255

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  MAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  +I ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 197


>gi|299471492|emb|CBN79978.1| 20S proteasome subunit alpha type 1 [Ectocarpus siliculosus]
          Length = 263

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 58/178 (32%), Gaps = 19/178 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               L +R    VV+A   +       M A  +K+ +L     +A  AG +ADA +L + 
Sbjct: 32  GGASLGLRSGSHVVLAALKRA---PNEMSAPQKKIFKLDSNMGVA-IAGLTADARSLAKY 87

Query: 75  LEKKLEQYPNQLLRSSVEL--------AKDWRMDKYLRNLEAMILIA---DKTITLVITG 123
           +  +   +      +                    Y+R    + ++    D+T   +   
Sbjct: 88  MRTECLNHKYVYGTTMQASRLVLDLADMHQRTTQSYVRRPYGVGMLVAAHDQTGPHLFQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNHN 179
                  E   MAIG+    A +              +E+ + A+   +  CV T   
Sbjct: 148 CPSGNYFEYVAMAIGARSQSAKTYLEKHFEDFENCDLDELVKHALKALSG-CV-TGDK 203


>gi|115480403|ref|NP_001063795.1| Os09g0538200 [Oryza sativa Japonica Group]
 gi|122240541|sp|Q0J006|PSA7B_ORYSJ RecName: Full=Proteasome subunit alpha type-7-B; AltName: Full=20S
           proteasome alpha subunit D-2; AltName: Full=20S
           proteasome subunit alpha-4-B
 gi|158513650|sp|A2Z3I9|PSA7B_ORYSI RecName: Full=Proteasome subunit alpha type-7-B; AltName: Full=20S
           proteasome alpha subunit D-2; AltName: Full=20S
           proteasome subunit alpha-4-B
 gi|50726607|dbj|BAD34241.1| Proteasome subunit alpha type 7 [Oryza sativa Japonica Group]
 gi|50726660|dbj|BAD34378.1| Proteasome subunit alpha type 7 [Oryza sativa Japonica Group]
 gi|113632028|dbj|BAF25709.1| Os09g0538200 [Oryza sativa Japonica Group]
 gi|125564520|gb|EAZ09900.1| hypothetical protein OsI_32194 [Oryza sativa Indica Group]
 gi|125606463|gb|EAZ45499.1| hypothetical protein OsJ_30156 [Oryza sativa Japonica Group]
 gi|215768958|dbj|BAH01187.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 249

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 52/192 (27%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGSDTVVLGVEKKSTPKLQ-DSRSVRKIASLDTHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           R   + + +   +  +         +A   +       +    L               +
Sbjct: 87  RARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEIAVMTQKD 214


>gi|148224976|ref|NP_001079985.1| hypothetical protein LOC379676 [Xenopus laevis]
 gi|34849610|gb|AAH58201.1| MGC68557 protein [Xenopus laevis]
          Length = 255

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 42/165 (25%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIAIRCKDGVVFGVEKLVLSKLYEEGSNKRIFNVDRHVGMAVAGLLADARSLADIA 92

Query: 73  ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITG 123
                              L       A  + +   +R      ++          +   
Sbjct: 93  REEASNFRANYGYDIPLKHLSDRVAMYAHAYTLYSAVRPFGCSFMLGSYNEDDDAQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L   + +  +  ++   I
Sbjct: 153 DPSGISYGYWGCAIGKAKQAAKTEIEKLQMKEMTCRDAVKEVAKI 197


>gi|322699150|gb|EFY90914.1| proteasome subunit alpha type 3 [Metarhizium acridum CQMa 102]
          Length = 306

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 51/210 (24%), Gaps = 56/210 (26%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF------------- 61
             T + +R    VV+A +  V+       AN +++  +     +                
Sbjct: 34  GGTSIGIRCKDGVVLAVEKVVTSKLLKPGAN-KRIATVDSHIGVTCRVFGAEANLCTQVY 92

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------- 110
           +G   D    ++R   + + +               RM  YL+                 
Sbjct: 93  SGMVPDGRHFVDRARDESQSWRQNFKTPIPTADLASRMGGYLQAYTMYGSVRPFGITAIV 152

Query: 111 --------------------------LIADKTITLVITGMGDVLEPENGVMAIGSGGSYA 144
                                     +        +       L       A G G   A
Sbjct: 153 GGVDTSEETPVDGEVGSGPKCGAGGKVPGKHGGPFLYMIEPSGLYWGYYGAATGKGRQAA 212

Query: 145 LSAARA--LMSTQNSAEEIARKA---MSIA 169
            +      L S   + EE  ++A   + IA
Sbjct: 213 KAELEKLDLQSGNMTMEEAVKEAARIIYIA 242


>gi|301117018|ref|XP_002906237.1| proteasome subunit alpha type-3, putative [Phytophthora infestans
           T30-4]
 gi|262107586|gb|EEY65638.1| proteasome subunit alpha type-3, putative [Phytophthora infestans
           T30-4]
          Length = 258

 Score = 43.8 bits (102), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 59/172 (34%), Gaps = 19/172 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + ++    +++  +  + L + ++    R+V  + +   ++  AG  AD   L+ 
Sbjct: 33  NSGTTIGIKCTDGIIMGVEKTL-LSKMLVPGTHRRVYAIDRHVGLS-MAGLVADGRQLVN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL----------EAMILIA---DKTITLV 120
           R  ++   Y      S        RM +++              A++L     D   + +
Sbjct: 91  RAREEALNYKKNYGGSIPPHLLAERMGQFVHYYTLYGSIRPFGTAIMLAGYDQDIKKSSL 150

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADI 172
                  +       A+G G   A +          +     R+AM   A I
Sbjct: 151 YMVEPSGVTYSYRGCALGKGQQSAKTEIEKYKLFDMT----CREAMKYVAKI 198


>gi|71396420|ref|XP_802386.1| proteasome alpha 2 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70862545|gb|EAN80940.1| proteasome alpha 2 subunit, putative [Trypanosoma cruzi]
          Length = 179

 Score = 43.4 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 12/138 (8%)

Query: 40  TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPN---------QLLRSS 90
                  +KV  L    +   ++G   D   L++   K  ++Y           QL+R  
Sbjct: 2   LAASLTVQKVFVLDDH-VGCTYSGIGPDCRVLVDAARKACQKYRLTYHEPMPVSQLVRQI 60

Query: 91  VELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAA 148
             L +++     +R     +L+A  D     +               +IG G + A +  
Sbjct: 61  SSLYQEFTQSGGVRPFGCSLLVAGADSQGNHLYQVDPSGTFWAWKATSIGKGSTDAKTFL 120

Query: 149 RALMSTQNSAEEIARKAM 166
               + +   E+    A+
Sbjct: 121 EKRYTNEMEIEDAVHTAL 138


>gi|12229936|sp|Q9SXU1|PSA7_CICAR RecName: Full=Proteasome subunit alpha type-7; AltName: Full=20S
           proteasome alpha subunit D; AltName: Full=20S proteasome
           subunit alpha-4
 gi|4586592|dbj|BAA76428.1| multicatalytic endopeptidase complex [Cicer arietinum]
          Length = 249

 Score = 43.4 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 53/192 (27%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDNVVLGVEKKSTAKLQ-DTRSVRKIVNLDDHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +               L + +     +R      LI           +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSIREFLEKNFKETSGQETVKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   +
Sbjct: 203 KNIEVAVMTKEN 214


>gi|308322177|gb|ADO28226.1| proteasome subunit alpha type-2 [Ictalurus furcatus]
          Length = 234

 Score = 43.4 bits (101), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKA--NARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDELSVHKVEPITKHIGMV-YSGMGPDYRVLLRRAR 91

Query: 77  KKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D+    +     
Sbjct: 92  KLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 152 SGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|159486557|ref|XP_001701305.1| 20S proteasome alpha subunit B [Chlamydomonas reinhardtii]
 gi|158271788|gb|EDO97600.1| 20S proteasome alpha subunit B [Chlamydomonas reinhardtii]
          Length = 235

 Score = 43.4 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 13/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L +     VVIA + ++     V +   +K+  +     +  ++G   D   L+ R
Sbjct: 32  GATSLGISATDGVVIATEKKLPS-ALVDETTVQKIMTITPQIGVV-YSGMGPDFRVLVRR 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K  + Y           QL+R +  + +++     +R     +L+A  D     +   
Sbjct: 90  ARKTAQAYFQTYKEHIPVAQLVRETAAVMQEFTQTGGVRPFGVSLLMAGYDDNGPQLYQI 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG   + A +      S +   E+    A+
Sbjct: 150 DPSGSYFAWKASAIGKNMTNAKAFLEKRYSDEVGIEDAVHTAL 192


>gi|21465648|pdb|1IRU|G Chain G, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465662|pdb|1IRU|U Chain U, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
          Length = 254

 Score = 43.4 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 32  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 89

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 90  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 149

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  +I ++   I
Sbjct: 150 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 196


>gi|145343708|ref|XP_001416455.1| Proteasome subunit alpha type 4-like protein [Ostreococcus
           lucimarinus CCE9901]
 gi|144576680|gb|ABO94748.1| Proteasome subunit alpha type 4-like protein [Ostreococcus
           lucimarinus CCE9901]
          Length = 231

 Score = 43.4 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 61/192 (31%), Gaps = 16/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI--IAGFAGSSADAFTL 71
           HA T + +  +  +++A + ++        +   K+ ++ +  +  IAG    +      
Sbjct: 30  HAGTCIGLHTENGILLASEKKIMSKLLEQSSTPEKLWKIDQHIVAAIAGLNADAMILINF 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKT---ITLVIT 122
              +  +             L++   +  + +     LR      L A         +  
Sbjct: 90  ARVIAGRYRARYGTLIPVENLVQELSDHKQGYTQFGGLRPYGVAFLFAGCDGRNGFQLYH 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAADICV-YTNH 178
                        AIG+    A S  +   +   S   A+ +A K +    D CV  T+ 
Sbjct: 150 SEPSGNYSAWKAAAIGASHQAARSMLKTDFTEGLSIDEAKSVACKVLQKTMD-CVNLTSD 208

Query: 179 NIVLETLKVGDE 190
            + +  L    +
Sbjct: 209 KVEMFYLTRNKD 220


>gi|194757395|ref|XP_001960950.1| GF11246 [Drosophila ananassae]
 gi|190622248|gb|EDV37772.1| GF11246 [Drosophila ananassae]
          Length = 252

 Score = 43.4 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/152 (11%), Positives = 46/152 (30%), Gaps = 14/152 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T+  VR + V+V+  + + +      +   RK+  +    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTVCGVRTNNVIVLGMEKKSTS-DLQEERFNRKIFTIDDH-VVMTFAGLTADARILVN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL----------EAMILIADKTI--TLVI 121
           R++ + + +     +          + +  +             + ++          + 
Sbjct: 88  RVQVEAQSHRLNFEKPVSVEYITRYIAQMKQKYTQSNGRRPFGLSCLVGGFDENGTPHLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMS 153
                 +  E      G               
Sbjct: 148 QTEPSGIFYEWTANTTGRSAHTVREYLEKHAD 179


>gi|118358232|ref|XP_001012340.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila]
 gi|89294131|gb|EAR92119.1| Proteasome A-type and B-type family protein [Tetrahymena
           thermophila SB210]
          Length = 245

 Score = 43.4 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 14/156 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + VR    VV+  + + +    V   +   +  + +    A   G   D+  ++ R
Sbjct: 31  GITTIGVRGKDCVVLITEKK-TQESYVDMNSFTNIHTVSERVGAAT-TGYYPDSKAIVTR 88

Query: 75  LEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
           L ++  +Y  +               +L++ +    ++R      ++A        L+  
Sbjct: 89  LRQEASEYKLKNGHFMPVDQLSCRLGDLSQVYTQKAFMRPYAVETILAGYDNELGPLLYK 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA 158
                       +A G     A+           +A
Sbjct: 149 NDPSGYFCGYRAVASGIKEQDAIHQLEKEFKKDKNA 184


>gi|238585089|ref|XP_002390764.1| hypothetical protein MPER_09910 [Moniliophthora perniciosa FA553]
 gi|215454558|gb|EEB91694.1| hypothetical protein MPER_09910 [Moniliophthora perniciosa FA553]
          Length = 145

 Score = 43.4 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 31/133 (23%), Gaps = 16/133 (12%)

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMD--KYLRNLEAMIL----------IADKTITL 119
            +    ++  Y  +  R          +    Y R      +           +      
Sbjct: 1   RKLFRYRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPFFIEPVMAGMSKTPSGGLKPF 60

Query: 120 VITGMG-DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVY 175
           +        L      +  G+  S     A  L       E++     + M  A D   Y
Sbjct: 61  IAATDLIGCLNFAKDFVVAGTASSKLYGVAEGLWEPDLEPEDLFETISQTMLNAVDRDAY 120

Query: 176 TNHNIVLETLKVG 188
           +   + +  +   
Sbjct: 121 SGWGVQVHVITKD 133


>gi|308808890|ref|XP_003081755.1| 20S proteasome, regulatory subunit alpha type PSMA3/PRE10 (ISS)
           [Ostreococcus tauri]
 gi|116060221|emb|CAL56280.1| 20S proteasome, regulatory subunit alpha type PSMA3/PRE10 (ISS)
           [Ostreococcus tauri]
          Length = 262

 Score = 43.4 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 13/161 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + V+    VVIA +  V         N R+ R + +   + G +G + D   + +R
Sbjct: 94  GGLTVGVKCVDGVVIACEKLVPSKLHKPGTN-RRTRAVARHAGVGG-SGYTPDLAAVADR 151

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVITG 123
              +   Y +    +        RM  Y                 ++   D     +   
Sbjct: 152 ARAECANYKSFYGDAIPGKVLAERMAHYYHLFTLYWSVRPFGCSTLLGCKDFDGYHLYLV 211

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
             +    +     IG G + A +    L   + +  E  ++
Sbjct: 212 EQNGECAKMRGACIGKGKNAAKTEVEKLKLNEITCAEAVKE 252


>gi|323305210|gb|EGA58957.1| Pre1p [Saccharomyces cerevisiae FostersB]
          Length = 155

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 30/113 (26%), Gaps = 11/113 (9%)

Query: 59  AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAM 109
             FAG + D     E ++  ++ Y  +        A               +    +  +
Sbjct: 1   MSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVL 60

Query: 110 ILIADK--TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           I   DK      +        + E    A G  G Y  S          + EE
Sbjct: 61  IGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEE 113


>gi|195339685|ref|XP_002036447.1| GM18005 [Drosophila sechellia]
 gi|194130327|gb|EDW52370.1| GM18005 [Drosophila sechellia]
          Length = 281

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++     V+    + +     +    RK+  +     I+  AG +ADA  L   
Sbjct: 32  GTATVGLKNKDYAVLVALCKPTSE---LSDTQRKIIPIDDHLGIS-IAGLTADARVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +       + R    L         R D+    +  ++   D+    +   
Sbjct: 88  LRSECLNYKHSYDSTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
                       +IGS    A +     ++     S +EI R  +  
Sbjct: 148 TPSATFFNCKANSIGSRSQSARTYLERNLNKFLDCSKDEIIRHGIRA 194


>gi|149588148|ref|XP_001506542.1| PREDICTED: similar to Proteasome subunit alpha type 2 (Proteasome
           component C3) (Macropain subunit C3) (Multicatalytic
           endopeptidase complex subunit C3) [Ornithorhynchus
           anatinus]
          Length = 234

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 50/160 (31%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++     +      QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYHEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|48145983|emb|CAG33214.1| PSMA3 [Homo sapiens]
          Length = 255

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  +I ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 197


>gi|213405875|ref|XP_002173709.1| proteasome component Y7 [Schizosaccharomyces japonicus yFS275]
 gi|212001756|gb|EEB07416.1| proteasome component Y7 [Schizosaccharomyces japonicus yFS275]
          Length = 245

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 50/162 (30%), Gaps = 10/162 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T + ++    VV+A + + +    +  +  +        G + +G             
Sbjct: 31  GVTSIGIKARNGVVLATEKKTNTELALGSSLQKISGITPDVGMVYSGMGPDYRVLVDKAR 90

Query: 74  R-----LEKKLEQYP--NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGM 124
           +      ++   +YP    L++    + ++      +R     +LIA  D     +    
Sbjct: 91  KVSHTNYKRIYNEYPPTKILVQEVASIMQESTQSGGVRPFGVSLLIAGIDDNGPSLYQVD 150

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                      AIG   + A +      + +   E+    A+
Sbjct: 151 PSGTYFAWKATAIGKSSTVAKTFLEKRFNEEMELEDAIHTAI 192


>gi|54696294|gb|AAV38519.1| proteasome (prosome, macropain) subunit, alpha type, 3 [synthetic
           construct]
 gi|61367260|gb|AAX42973.1| proteasome subunit alpha type 3 [synthetic construct]
          Length = 256

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  +I ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 197


>gi|195156201|ref|XP_002018989.1| GL26115 [Drosophila persimilis]
 gi|194115142|gb|EDW37185.1| GL26115 [Drosophila persimilis]
          Length = 219

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 3/122 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR    VV+A + + S+ +  +    RK+  L +  I+A F+G +ADA  L+ 
Sbjct: 30  KGSTAVGVRGGSCVVLAVEKK-SVPKLQVDRTVRKICLLDQHIIMA-FSGLTADARVLIN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG-MGDVLEPEN 132
           R + + + +   +            + +  +            I+ +I G  G     E 
Sbjct: 88  RAQVECQTHRLNVEDQVTVEYITRYIAQIKQKYTQSNGRRPFGISCLIGGFDGRWEFFEK 147

Query: 133 GV 134
             
Sbjct: 148 NY 149


>gi|195578069|ref|XP_002078888.1| GD23664 [Drosophila simulans]
 gi|194190897|gb|EDX04473.1| GD23664 [Drosophila simulans]
          Length = 281

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++     V+    + +     +    RK+  +     I+  AG +ADA  L   
Sbjct: 32  GTATVGLKNKDYAVLVALCKPTSE---LSDTQRKIIPIDDHLGIS-IAGLTADARVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +       + R    L         R D+    +  ++   D+    +   
Sbjct: 88  LRSECLNYKHSYDSTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
                       +IGS    A +     ++     S +EI R  +  
Sbjct: 148 TPSATFFNCKANSIGSRSQSARTYLERNLNKFLDCSKDEIIRHGIRA 194


>gi|17737927|ref|NP_524328.1| proteasome 25kD subunit [Drosophila melanogaster]
 gi|195329530|ref|XP_002031463.1| GM24033 [Drosophila sechellia]
 gi|195571423|ref|XP_002103702.1| GD18834 [Drosophila simulans]
 gi|730372|sp|P40301|PSA2_DROME RecName: Full=Proteasome subunit alpha type-2; AltName:
           Full=PROS-Dm25; AltName: Full=Proteasome 25 kDa subunit
 gi|397850|emb|CAA49783.1| proteasome, 25kDa subunit [Drosophila melanogaster]
 gi|7299630|gb|AAF54814.1| proteasome 25kD subunit [Drosophila melanogaster]
 gi|17861896|gb|AAL39425.1| GM13604p [Drosophila melanogaster]
 gi|194120406|gb|EDW42449.1| GM24033 [Drosophila sechellia]
 gi|194199629|gb|EDX13205.1| GD18834 [Drosophila simulans]
 gi|220943850|gb|ACL84468.1| Pros25-PA [synthetic construct]
 gi|220953688|gb|ACL89387.1| Pros25-PA [synthetic construct]
          Length = 234

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 49/159 (30%), Gaps = 13/159 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     VVIA + +        + +  +V  +     +  ++G   D   L+++  K 
Sbjct: 36  VGIIASNGVVIATENKHKS-PLYEQHSVHRVEMIYNHIGMV-YSGMGPDYRLLVKQARKI 93

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDV 127
            + Y           QL++    L +++     +R     +LI   D     +       
Sbjct: 94  AQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSG 153

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      S     ++    A+
Sbjct: 154 AYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAI 192


>gi|82621184|gb|ABB86280.1| proteasome-like protein alpha subunit-like [Solanum tuberosum]
          Length = 249

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSVRKIVNLDDHIALAC-AGLKADARVLVN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   +               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAM 166
                          A G   +             +     ++A +A+
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSGQETVKLAIRAL 194


>gi|300920004|ref|ZP_07136463.1| hypothetical protein HMPREF9540_03683 [Escherichia coli MS 115-1]
 gi|300412951|gb|EFJ96261.1| hypothetical protein HMPREF9540_03683 [Escherichia coli MS 115-1]
          Length = 162

 Score = 43.4 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 55/173 (31%), Gaps = 31/173 (17%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVR--------RLGKGNIIAGFAGSSADA 68
           T +         +A D Q S G  V     +K+           G   +  G +G     
Sbjct: 2   TTIAW---DGKTLASDTQASSGDVVCSYTEQKIYTPPESGWEVCGSKVVALGCSGDCGAE 58

Query: 69  FTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVL 128
             L E L+  L  Y ++ L +    A                 I  K        +   +
Sbjct: 59  MELQELLKNNLT-YASEFLPTFSFTALAII-------GAGRAYIISKEKGETRASISRQV 110

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIV 181
           EP     AIGSG          +  T     + AR+A+ +A DI  Y+  ++ 
Sbjct: 111 EP----YAIGSG--------WLIARTAMHCGKNAREAVQVAIDIDCYSGGSVD 151


>gi|126465755|ref|YP_001040864.1| proteasome subunit alpha [Staphylothermus marinus F1]
 gi|126014578|gb|ABN69956.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
          Length = 248

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 46/155 (29%), Gaps = 13/155 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
              T L V+     V+  + +  +   +     +K+ ++ K    A FAG ++D   L++
Sbjct: 36  RGWTTLGVKSREGAVVVVEKR-KISPLIDDKAIQKIFKIDKHIG-ASFAGIASDGRVLVD 93

Query: 74  RLE--KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM---------ILIADKTITLVIT 122
                  L ++      +   LAK     K      A           +  D   + +  
Sbjct: 94  YARQVALLHRFYYDERITVEYLAKQVCDIKQAYTQHAGVRPFGVAIIFVGVDDKGSQLYM 153

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
                       +AIG   S A            S
Sbjct: 154 TEPSGRYLSYYAVAIGEKSSSATEFLEKNYKYDVS 188


>gi|312071781|ref|XP_003138766.1| PAS-3 protein [Loa loa]
 gi|307766066|gb|EFO25300.1| PAS-3 protein [Loa loa]
          Length = 226

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 56/200 (28%), Gaps = 24/200 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     ++IA + +        +    K+ RL        AG    +      
Sbjct: 6   HAGTCLGILASDGILIAAEKRNVHKLLDDEVLTEKIYRLADNIACTVAGITADANILINH 65

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L       +          QL++      + +      R     +L           +  
Sbjct: 66  LRFWAADYKYSYGEHIPVEQLVQMLCNEKQRYTQVGGKRPFGVSLLYMGWDQHFGYQLYQ 125

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS-TQN-SAEEIARKAMS-------IAADIC 173
                         IG+    A+S  +          A+++A K +S        A  I 
Sbjct: 126 SDPSGNYTGWKATCIGNNHQAAVSLLKQEYKSPDLIEAKKLAMKVLSKTLDVKLSAEKIE 185

Query: 174 VYT----NHNIVLETLKVGD 189
           + T    N   V+E L   +
Sbjct: 186 MATLTRSNDKTVVENLTSAE 205


>gi|326429247|gb|EGD74817.1| proteasome subunit alpha type-2 [Salpingoeca sp. ATCC 50818]
          Length = 236

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 52/165 (31%), Gaps = 15/165 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGK--GNIIAGFAGSSADAFTL 71
             T + ++     VIA + +  +G   V + +  KV +L +  G + +G           
Sbjct: 31  GATSIGIKTTEGAVIASEKK--MGSILVDEQSITKVDKLTERIGMVYSGMGPDKRVLLAK 88

Query: 72  LERLEKKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIAD----KTITLVI 121
             +L ++      +      L+R    + +++     +R     +L+           + 
Sbjct: 89  GRKLAQQYFMTYREQIPTRMLVRELANVMQEYTQRGGVRPFGVSLLVVGFDQHTEKPALY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                         A+G     A +      + +   E+    A+
Sbjct: 149 QVDPSGSFFAWKATALGRNMINAKAFLEKRYNDELELEDAVHTAI 193


>gi|157325490|ref|YP_001469627.1| HslV family peptidase [Xanthomonas phage Xop411]
 gi|157269881|gb|ABV26562.1| HslV family peptidase [Xanthomonas phage Xop411]
          Length = 141

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 39/164 (23%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T +         +A D QV+ G   +K   +K RRL  G +I            + + L+
Sbjct: 2   TTIAF---DGTSLACDSQVTAGN--IKGKMKKFRRLPGGGVIVVAGEIDLLDDAVQDFLD 56

Query: 77  KK----LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
            +    L     Q        A+  R+D+                     G  + + P +
Sbjct: 57  GEPPAVLRDQDGQER------AQFVRLDR-------------SGCWYTSDGEWNKMYPGD 97

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
              AIGSG  YAL+     +         A+KA+++A  + +Y+
Sbjct: 98  ---AIGSGAPYALTCLHLGLD--------AKKAVTVACQLDLYS 130


>gi|302901926|ref|XP_003048542.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729475|gb|EEU42829.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 250

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 15/166 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLE 73
             T L ++    +V+A + + S       + A+        G + +G             
Sbjct: 31  GITALGIKATNGIVLATEKKSSSPLADQSSLAKISNITPNIGMVYSGMGPDYRVLVDRAR 90

Query: 74  R-----LEKKLEQYP--NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITG 123
           +      ++   +YP    L++    + ++      +R     +L+A        ++   
Sbjct: 91  KVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSAGVRPYGVSLLVAGWDEVGGPMLYQV 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
                       AIG   + A +      S +   E+    A+ IA
Sbjct: 151 DPSGSYYPWKATAIGKSATKAKTFLEKRYSEELELED----AIHIA 192


>gi|116787838|gb|ABK24661.1| unknown [Picea sitchensis]
          Length = 198

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 11/138 (7%)

Query: 36  SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL-EKKLEQYPNQLLRSSVELA 94
           S G T+   + ++++ +GK  ++ G  G  +D   ++  L E  L         S     
Sbjct: 4   SYGSTLRYKSVQRLKPIGKHTLL-GAGGEISDFQEIVRYLDELILYDNMWDDGNSLGPKE 62

Query: 95  KDWRMDK--YLRNLEAMILI-------ADKTITLVITGMGDVLEPENGVMAIGSGGSYAL 145
               +++  Y R  +   L               + T     +  E   +A G G   A 
Sbjct: 63  VHNYLNRLMYNRRNKFNPLWNTLVLGGVKNGQKYLGTVNMIGVHYEENHVATGFGNHLAR 122

Query: 146 SAARALMSTQNSAEEIAR 163
              R       + EE  +
Sbjct: 123 PIFRDEWHEDMTFEEGVK 140


>gi|114672629|ref|XP_001157944.1| PREDICTED: proteasome (prosome, macropain) subunit, alpha type, 8
           isoform 3 [Pan troglodytes]
 gi|332849613|ref|XP_003315881.1| PREDICTED: proteasome (prosome, macropain) subunit, alpha type, 8
           [Pan troglodytes]
          Length = 256

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 23/175 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-----IIAGFAGSSADA 68
             +T + +R   +VV+  + + S+ +   +   RK+  L         ++  F G +ADA
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDHVCMAFAVLTIFVGLTADA 88

Query: 69  FTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKT 116
             ++ R   + + +   +            +A   +            + A      D  
Sbjct: 89  RVVINRACVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDG 148

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN-----SAEEIARKAM 166
           I+ +               AIG              +         A ++A KA+
Sbjct: 149 ISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKAL 203


>gi|242014756|ref|XP_002428051.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
 gi|212512570|gb|EEB15313.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
          Length = 234

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/157 (10%), Positives = 44/157 (28%), Gaps = 9/157 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERLEK 77
           + ++    VVIA + +         +  +  +   + G + +G             ++ +
Sbjct: 36  VGIKASNGVVIATENKHKSILYDEHSVNKVEKITDQIGMVYSGMGPDYRLLVRKARKMAQ 95

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDVLE 129
           +            QL+     + +++     +R     +LI   D     +         
Sbjct: 96  QYFLTYQEPIPTAQLVPRVATVMQEYTQSGGVRPFGVSLLICGWDGEKPHLFQCDPSGSY 155

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 A+G       +      S     ++    A+
Sbjct: 156 FAWKATAMGKNFINGRTFLEKRYSEDLELDDAVHTAI 192


>gi|119601123|gb|EAW80717.1| proteasome (prosome, macropain) subunit, alpha type, 3, isoform
           CRA_c [Homo sapiens]
          Length = 228

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 6   NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 63

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 64  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 123

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  +I ++   I
Sbjct: 124 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 170


>gi|4506183|ref|NP_002779.1| proteasome subunit alpha type-3 isoform 1 [Homo sapiens]
 gi|109083755|ref|XP_001091541.1| PREDICTED: proteasome subunit alpha type-3 isoform 4 [Macaca
           mulatta]
 gi|114653223|ref|XP_001164848.1| PREDICTED: proteasome subunit alpha type-3 isoform 6 [Pan
           troglodytes]
 gi|296215138|ref|XP_002754003.1| PREDICTED: proteasome subunit alpha type-3-like isoform 2
           [Callithrix jacchus]
 gi|297695199|ref|XP_002824839.1| PREDICTED: proteasome subunit alpha type-3-like isoform 2 [Pongo
           abelii]
 gi|332237184|ref|XP_003267783.1| PREDICTED: proteasome subunit alpha type-3-like isoform 1 [Nomascus
           leucogenys]
 gi|332842340|ref|XP_003314399.1| PREDICTED: proteasome subunit alpha type-3 [Pan troglodytes]
 gi|130859|sp|P25788|PSA3_HUMAN RecName: Full=Proteasome subunit alpha type-3; AltName:
           Full=Macropain subunit C8; AltName: Full=Multicatalytic
           endopeptidase complex subunit C8; AltName:
           Full=Proteasome component C8
 gi|220028|dbj|BAA00659.1| proteasome subunit C8 [Homo sapiens]
 gi|25058517|gb|AAH38990.1| Proteasome (prosome, macropain) subunit, alpha type, 3 [Homo
           sapiens]
 gi|54696296|gb|AAV38520.1| proteasome (prosome, macropain) subunit, alpha type, 3 [Homo
           sapiens]
 gi|61357245|gb|AAX41358.1| proteasome subunit alpha type 3 [synthetic construct]
 gi|119601125|gb|EAW80719.1| proteasome (prosome, macropain) subunit, alpha type, 3, isoform
           CRA_e [Homo sapiens]
 gi|189054781|dbj|BAG37603.1| unnamed protein product [Homo sapiens]
 gi|208967168|dbj|BAG73598.1| proteasome (prosome, macropain) subunit, alpha type 3 [synthetic
           construct]
          Length = 255

 Score = 43.4 bits (101), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  +I ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 197


>gi|194757451|ref|XP_001960978.1| GF11235 [Drosophila ananassae]
 gi|190622276|gb|EDV37800.1| GF11235 [Drosophila ananassae]
          Length = 244

 Score = 43.4 bits (101), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 48/186 (25%), Gaps = 14/186 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V  +     R     G  + G    +          
Sbjct: 38  TTVALKSGDCAVVATQKKVTEKNIVPDSVTHLFRITKDIGCAMTGRIADARSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
                    Y   +      +A   ++      +  +          D+    V      
Sbjct: 98  AANFRYKFGYDMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDDEIGASVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIVLE 183
                    ++G+    A S          S E   ++A   +S    I  +  + I + 
Sbjct: 158 GYYSGFRACSVGAKSIEANSYLEKKYKNNLSEEKTIQLAITCLSSVLAID-FKPNGIEIG 216

Query: 184 TLKVGD 189
            +   D
Sbjct: 217 VVSKTD 222


>gi|225716228|gb|ACO13960.1| Proteasome subunit alpha type-4 [Esox lucius]
          Length = 234

 Score = 43.4 bits (101), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 15/191 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA   L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGACLGILANDGVLLAAERRNIHKLLDDVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTNH 178
                         IG+  + A+S  +           SA  +A K ++   D+   +  
Sbjct: 150 SDPSGNYGGWKATCIGNNSAAAVSMLKQDFKEGEMSLSSALALAVKVLNKTMDVSKLSAE 209

Query: 179 NIVLETLKVGD 189
            + + TL   +
Sbjct: 210 KVEIATLTREN 220


>gi|332658164|gb|AEE83564.1| N-terminal nucleophile aminohydrolases (Ntn hydrolases)-like
           protein [Arabidopsis thaliana]
          Length = 208

 Score = 43.4 bits (101), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 31/155 (20%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A + + +     VV+ G+ +V+       ++  K+ ++    +    AG  +DA  L+ 
Sbjct: 30  NAGSAIGILAKDGVVLVGEKKVTSKLLQTSSSMEKMYKIDDH-VACAVAGIMSDANILIN 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
               + +++                                     +             
Sbjct: 89  TARVQAQRWDRNHG------------------------------FQLYMSDPSGNYGGWQ 118

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             A+G+    A S  +       + EE+ + A+ +
Sbjct: 119 AAAVGANNQAAQSILKQDYKDDATREEVVQLAIKV 153


>gi|114653229|ref|XP_001164737.1| PREDICTED: proteasome alpha 3 subunit isoform 5 [Pan troglodytes]
 gi|119601121|gb|EAW80715.1| proteasome (prosome, macropain) subunit, alpha type, 3, isoform
           CRA_a [Homo sapiens]
          Length = 219

 Score = 43.0 bits (100), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  +I ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 197


>gi|332252665|ref|XP_003275474.1| PREDICTED: proteasome subunit alpha type-4-like [Nomascus
           leucogenys]
          Length = 245

 Score = 43.0 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 57/180 (31%), Gaps = 9/180 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L +  +  V++A + +           + K+ +L +       AG ++DA  L  
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMA-CSVAGITSDANVLTN 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
            L    ++Y  Q             +    +                 +G          
Sbjct: 89  ELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGXXXXXXXXXDPSGNYGG----WK 144

Query: 134 VMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNHNIVLETLKVGD 189
              IG+  + A+S  +           SA  +A K ++   D+   +   + + TL   +
Sbjct: 145 ATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIATLTREN 204


>gi|295672894|ref|XP_002796993.1| proteasome component C1 [Paracoccidioides brasiliensis Pb01]
 gi|226282365|gb|EEH37931.1| proteasome component C1 [Paracoccidioides brasiliensis Pb01]
          Length = 347

 Score = 43.0 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 9/136 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + K   I   +G   D    ++
Sbjct: 52  NGGTSIGIRCKDGVVLAVEKIISSKLLKPGAN-KRISTVDKHIGIV-SSGLIPDGRHFVD 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT--GMGDVLEPE 131
           R   +   + N             R+  Y++                +T    G   E E
Sbjct: 110 RARDEAYSWRNTYKGPISTSVLASRLGSYVQAYTLY----SSVRPFCVTSIIGGWDSEIE 165

Query: 132 NGVMA-IGSGGSYALS 146
             V   +GSG      
Sbjct: 166 LPVDGQVGSGPKSGAG 181


>gi|195618618|gb|ACG31139.1| proteasome subunit alpha type 7 [Zea mays]
          Length = 249

 Score = 43.0 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 51/192 (26%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSVRKIACLDTHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           R   + + +   +            +A   +       +    L               +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITLYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEVAVMTKKD 214


>gi|39644890|gb|AAH02900.2| PSMA2 protein [Homo sapiens]
          Length = 225

 Score = 43.0 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 27  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 83

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 84  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 143

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 144 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 183


>gi|2582508|gb|AAB82572.1| 20S proteasome alpha7 subunit [Drosophila melanogaster]
          Length = 249

 Score = 43.0 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 45/172 (26%), Gaps = 17/172 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
            + T++ +R    VV+A +  ++       A  R        G  +AG          + 
Sbjct: 32  KSGTVIGIRGKDAVVLAVEKIITSKLYEPHAGGRIFTIEKNIGMAVAGLVADGNFVADIA 91

Query: 73  ERLEKKLEQYPNQLLR------SSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITG 123
            +      Q   Q +               + +   +R     I++A         +   
Sbjct: 92  RQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLYKI 151

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                               A +    L  T    +E+       A +I +Y
Sbjct: 152 EPSGSS-FGYFACASKAKQLAKTEMEKL-KTDMRTDELVE----SAGEI-IY 196


>gi|73963050|ref|XP_537460.2| PREDICTED: similar to Proteasome subunit alpha type 3 (Proteasome
           component C8) (Macropain subunit C8) (Multicatalytic
           endopeptidase complex subunit C8) (Proteasome subunit K)
           isoform 1 [Canis familiaris]
          Length = 255

 Score = 43.0 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 42/165 (25%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIA 92

Query: 73  ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITG 123
                              L          + +   +R      ++          +   
Sbjct: 93  REEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L   + +  +I ++   I
Sbjct: 153 DPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 197


>gi|21465643|pdb|1IRU|B Chain B, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
 gi|21465657|pdb|1IRU|P Chain P, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
           A Resolution
          Length = 233

 Score = 43.0 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 35  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 91

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 92  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 152 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 191


>gi|238488128|ref|XP_002375302.1| proteasome subunit alpha type 3, putative [Aspergillus flavus
           NRRL3357]
 gi|220700181|gb|EED56520.1| proteasome subunit alpha type 3, putative [Aspergillus flavus
           NRRL3357]
          Length = 298

 Score = 43.0 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 50/195 (25%), Gaps = 42/195 (21%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++    ++K  A K       ++    AG   D    + 
Sbjct: 33  NGGTAIGIRCKDGVVLAVEKIIT--SKLLKPGANKRIATVDRHVGIVSAGLVPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTI------- 117
           R   +   + +         A   R+  Y         +R      ++            
Sbjct: 91  RARDEAASWRSVYKGPIPVSALSNRLGSYVQAYTLYSSVRPFGVTAIVGGWDSEAELAVD 150

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--S 153
                                   +       L       A G G   A +    L   S
Sbjct: 151 GQVGSGPKSGSGGKVDGAKAGGPGLYMIEPSGLYWGYYGAATGKGRQAAKAELEKLDLSS 210

Query: 154 TQNSAEEIARKAMSI 168
              S  +  ++A  I
Sbjct: 211 GNLSLVDAVKEAARI 225


>gi|316973717|gb|EFV57276.1| proteasome subunit beta type-3 [Trichinella spiralis]
          Length = 139

 Score = 43.0 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 32/115 (27%), Gaps = 14/115 (12%)

Query: 90  SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-DVLEPENGVMAIGSGGSYALSAA 148
              L  + R   Y        +    +   V        +   N  +  G+G        
Sbjct: 25  LSNLLYENRFSPYFCEPVVAGIDWKTSEPYVANMDLIGCICKPNDFVLSGTGDLQMYGMC 84

Query: 149 RALMSTQNS---AEEIARKAMSIAADIC--------VYT--NHNIVLETLKVGDE 190
            ++         A E   +A+    +          VYT  N  I ++++K   +
Sbjct: 85  ESVWEKNMDRDAAFEATAQALLACIERDAASGWGAVVYTISNDEIDVKSIKARLD 139


>gi|195146772|ref|XP_002014358.1| GL18993 [Drosophila persimilis]
 gi|194106311|gb|EDW28354.1| GL18993 [Drosophila persimilis]
          Length = 281

 Score = 43.0 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++     V+     +S   + + A+ RK+  +     I+  AG +ADA  +   
Sbjct: 32  GTATVGLKNRDFAVLVA---LSKPSSELSASQRKIIPIDDHLGIS-IAGITADARVISRY 87

Query: 75  LEKKLEQYPNQLL------RSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +         R    L         R D+    +  ++   D+    +   
Sbjct: 88  LRSECLSYKHSYGSTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVGGYDEKGPHIYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                       +IGS    A +     + T
Sbjct: 148 TPSATFYNCKANSIGSRSQSARTYLERNLDT 178


>gi|323337524|gb|EGA78770.1| Pre9p [Saccharomyces cerevisiae Vin13]
          Length = 220

 Score = 43.0 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 59/178 (33%), Gaps = 14/178 (7%)

Query: 25  GVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLE-RLEKKLEQ 81
             +V+A + +V+        +  K+ +L       +AG    +           +  L+ 
Sbjct: 4   DGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKT 63

Query: 82  YPNQ-----LLRSSVELAKDWRMDKYLRNLEAMILIA---DKTITLVITGMGDVLEPENG 133
           Y        L+R   ++ + +     LR      + A   D+    + T           
Sbjct: 64  YNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWK 123

Query: 134 VMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            +++G+  S A +  +           A E+A K +S   D    T   +   T++ G
Sbjct: 124 AISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKG 181


>gi|162458131|ref|NP_001105985.1| LOC100037815 [Zea mays]
 gi|125662835|gb|ABN50362.1| 20S proteasome alpha 4 subunit [Zea mays]
 gi|194697710|gb|ACF82939.1| unknown [Zea mays]
          Length = 249

 Score = 43.0 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 51/192 (26%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSVRKIACLDTHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           R   + + +   +            +A   +       +    L               +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEVAVMTKKD 214


>gi|169769555|ref|XP_001819247.1| proteasome component C1 [Aspergillus oryzae RIB40]
 gi|83767106|dbj|BAE57245.1| unnamed protein product [Aspergillus oryzae]
          Length = 298

 Score = 43.0 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 50/195 (25%), Gaps = 42/195 (21%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++    ++K  A K       ++    AG   D    + 
Sbjct: 33  NGGTAIGIRCKDGVVLAVEKIIT--SKLLKPGANKRIATVDRHVGIVSAGLVPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTI------- 117
           R   +   + +         A   R+  Y         +R      ++            
Sbjct: 91  RARDEAASWRSVYKGPIPVSALSNRLGSYVQAYTLYSSVRPFGVTAIVGGWDSEAELAVD 150

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--S 153
                                   +       L       A G G   A +    L   S
Sbjct: 151 GQVGSGPKSGSGGKVDGARAGGPGLYMIEPSGLYWGYYGAATGKGRQAAKAELEKLDLSS 210

Query: 154 TQNSAEEIARKAMSI 168
              S  +  ++A  I
Sbjct: 211 GNLSLVDAVKEAARI 225


>gi|71755719|ref|XP_828774.1| proteasome subunit alpha 7 [Trypanosoma brucei TREU927]
 gi|12229925|sp|Q9NDA2|PSA7_TRYBB RecName: Full=Proteasome subunit alpha type-7; AltName: Full=20S
           proteasome subunit alpha-4
 gi|9622230|gb|AAF89684.1|AF169652_1 20S proteasome alpha 4 subunit [Trypanosoma brucei]
 gi|70834160|gb|EAN79662.1| proteasome alpha 7 subunit, putative [Trypanosoma brucei]
 gi|261334682|emb|CBH17676.1| proteasome alpha 7 subunit, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 247

 Score = 43.0 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 54/190 (28%), Gaps = 20/190 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + V+    ++ A + + S+ +       RK+ +L +   +A    S+     +  
Sbjct: 28  KGLCAVGVKGKDSIIFAVEKK-SVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNH 86

Query: 74  --------RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVIT 122
                   RL  +     + L+R    + +        R      +I          +  
Sbjct: 87  AQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWK 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADICVYTNH- 178
                        AIG      L           + +     A KA+  A +    +   
Sbjct: 147 TEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLEAVE----SGSK 202

Query: 179 NIVLETLKVG 188
           NI L  L+ G
Sbjct: 203 NIELLVLERG 212


>gi|212275610|ref|NP_001130130.1| hypothetical protein LOC100191224 [Zea mays]
 gi|194688362|gb|ACF78265.1| unknown [Zea mays]
 gi|194702178|gb|ACF85173.1| unknown [Zea mays]
 gi|195620928|gb|ACG32294.1| proteasome subunit alpha type 7 [Zea mays]
 gi|219885293|gb|ACL53021.1| unknown [Zea mays]
          Length = 249

 Score = 43.0 bits (100), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 51/192 (26%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSVRKIACLDTHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           R   + + +   +            +A   +       +    L               +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEVAVMTKKD 214


>gi|58268316|ref|XP_571314.1| proteasome subunit alpha type 4 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134113158|ref|XP_774604.1| hypothetical protein CNBF2840 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257248|gb|EAL19957.1| hypothetical protein CNBF2840 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227549|gb|AAW44007.1| proteasome subunit alpha type 4, putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 285

 Score = 43.0 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 30/176 (17%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKAN-----------------ARKVRRLGKGN 56
           HA T+L V     + +A + +V+     +                      K+  L   N
Sbjct: 30  HAGTVLAVLSKEGIAMAAEKKVTGKLLDLSLTPGAGVGGEGTEAWMGGGGEKIFLL-NNN 88

Query: 57  IIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLE 107
           I+AG AG ++DA +L+       +++               R+            LR   
Sbjct: 89  ILAGLAGITSDANSLVNFARNSAQRHLFSYDEDIPVEMLVQRLCDMKQGYTQFGGLRPFG 148

Query: 108 AMILIADKTITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +L           +               +IG+  S A S  +       S E+
Sbjct: 149 VALLFVGWDPLYGFQLYQSDPSGNYSGWKATSIGANHSSATSLLKQDYKEDLSLED 204


>gi|324507573|gb|ADY43210.1| Aldehyde dehydrogenase family 7 member A1 [Ascaris suum]
          Length = 613

 Score = 43.0 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/166 (9%), Positives = 49/166 (29%), Gaps = 15/166 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L +     V++A D        ++  + +  +      ++    G   D     +  ++ 
Sbjct: 419 LGICTKDYVLLAADRSCFAYGAIVVTDEQDKKFDLGNKLVMLCIGEDGDVAQFGDWSKRN 478

Query: 79  LEQYPNQLLRSSVELA---------KDWRMDKYLRNLEAMILIADK--TITLVITGMG-D 126
           ++ Y  +        +          +    +    ++ +I   D+      + +     
Sbjct: 479 IQLYKLRYGYEMSPRSCHHWIRRSIAESLRSEDYYIVDTLIGGYDEFEKKAFLGSVDYLG 538

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIA 169
               +   +  G  G +  +    L  +  S  E   + +K +  A
Sbjct: 539 NGLADQPYLFRGFSGRFCYAILDRLYRSDMSEAEGLNVLKKCLMEA 584


>gi|126282483|ref|XP_001369098.1| PREDICTED: similar to multicatalytic proteinase subunit K
           [Monodelphis domestica]
          Length = 255

 Score = 43.0 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +          + 
Sbjct: 91  IAREEASNFRSNYGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYGVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|226874900|ref|NP_001012878.2| proteasome subunit alpha type-2 [Gallus gallus]
 gi|326922276|ref|XP_003207377.1| PREDICTED: proteasome subunit alpha type-2-like [Meleagris
           gallopavo]
          Length = 234

 Score = 43.0 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 50/160 (31%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++     +      QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYFLVYHEPIPTAQLVQRIASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|195165827|ref|XP_002023740.1| GL19755 [Drosophila persimilis]
 gi|194105874|gb|EDW27917.1| GL19755 [Drosophila persimilis]
          Length = 198

 Score = 43.0 bits (100), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/152 (11%), Positives = 43/152 (28%), Gaps = 17/152 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKA------NARKVRRLGKGNIIAGFAGSSADA 68
             +++ +  +  V IA D        ++        +   + ++     +A  +G   D 
Sbjct: 9   GGSVVAMAGNECVAIATD------HIILHDGENYDFDYGNLFQVHPYIYVA-LSGCEQDI 61

Query: 69  FTLLERLEKKLEQYPNQLL----RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
             +  R+  +   + N       ++     K+ R+  Y        L  D     +    
Sbjct: 62  IRVRNRMLLRQNMFGNVTPEIYAKNLSNYLKEPRLKPYQVESVVAGLNTDTVEPFICGVN 121

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN 156
           G      +   +         +  +AL     
Sbjct: 122 GSGELLNSEDFSASGKCPLIGTMCKALWKPDL 153


>gi|77999287|gb|ABB16990.1| proteasome-like protein alpha subunit [Solanum tuberosum]
          Length = 249

 Score = 43.0 bits (100), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSVRKIVNLDDHIALAC-AGLKADARVLVN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + +   +               L + +     +R      LI           +
Sbjct: 87  KARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAM 166
                          A G   +             +     ++A +A+
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSGQETVKLAIRAL 194


>gi|161528822|ref|YP_001582648.1| proteasome subunit alpha [Nitrosopumilus maritimus SCM1]
 gi|160340123|gb|ABX13210.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
          Length = 240

 Score = 42.7 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 42/157 (26%), Gaps = 12/157 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
             T  + V     V++A + +  +L  T +    +  +      + A      A      
Sbjct: 32  RGTLAIGVASKQGVIMAVEEKPRTLQSTDVTQ--KIFQVDYHIGVAAAGYIPDARVQVDS 89

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDW-------RMDKYLRNLEAMILIADKTITL--VITG 123
            R   +  +           +AK              +R     ++IA        +   
Sbjct: 90  ARFFSQGNRMTYDESVEVATVAKHLADQAHQFTQYGGVRPNGVSMIIAGVDQKGESIYVT 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                  +   +AIG+G     +          S E+
Sbjct: 150 DPSGTYVQFAAIAIGAGSDDVNAFLEKNYKEDMSLED 186


>gi|296420572|ref|XP_002839843.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636049|emb|CAZ84034.1| unnamed protein product [Tuber melanosporum]
          Length = 175

 Score = 42.7 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 14/136 (10%)

Query: 38  GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQY------PNQLLRSSV 91
           G T++KA   K R L     +  F+G + D     E ++  ++ Y        QL  S+V
Sbjct: 3   GVTILKAEDDKTRTLNPHT-LMAFSGEAGDTVQFAEYIQANVQLYGMRNNSKWQLSPSAV 61

Query: 92  ELAKDWRMDKYLRNLEAMILI-------ADKTITLVITGMGDVLEPENGVMAIGSGGSYA 144
                 ++ K LR+     +               +               A G    Y 
Sbjct: 62  ASFVRRQLAKSLRSRNPYYVNLLIGGFDCTTGKPHLYWLDYLASSAAVPYAAHGYAQYYC 121

Query: 145 LSAARALMSTQNSAEE 160
           LS          + EE
Sbjct: 122 LSILDKHHHPDITLEE 137


>gi|315501765|ref|YP_004080652.1| 20S proteasome a and b subunits [Micromonospora sp. L5]
 gi|315408384|gb|ADU06501.1| 20S proteasome A and B subunits [Micromonospora sp. L5]
          Length = 231

 Score = 42.7 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 51/164 (31%), Gaps = 18/164 (10%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS---SADAFTLL 72
           T +L V     VVI  D Q++     +   A+K+  LG      G       +     L 
Sbjct: 2   TVVLAVVCKDGVVIGADSQITESDRGLSFPAQKLHPLGDCAAWGGSGARGVLNDLRPLLQ 61

Query: 73  ERLEKKLEQ-YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG---MGDVL 128
           +     LE       L+  V        + Y+ ++         +  L+  G    G  +
Sbjct: 62  DSATAILEAPDIGDELQERVLPVFKKHYENYIPDVPGEGAGGGVSAYLLAAGFSQGGPWI 121

Query: 129 -----------EPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                        + G  AIGSG   A  A   L   + +   +
Sbjct: 122 VEINPNGLIGRYEDVGFHAIGSGAPMAQQAGALLSHFRMTTRTV 165


>gi|302865220|ref|YP_003833857.1| 20S proteasome subunit A/B [Micromonospora aurantiaca ATCC 27029]
 gi|302568079|gb|ADL44281.1| 20S proteasome A and B subunits [Micromonospora aurantiaca ATCC
           27029]
          Length = 231

 Score = 42.7 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 51/164 (31%), Gaps = 18/164 (10%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS---SADAFTLL 72
           T +L V     VVI  D Q++     +   A+K+  LG      G       +     L 
Sbjct: 2   TVVLAVVCKDGVVIGADSQITESDRGLSFPAQKLHPLGDCAAWGGSGARGVLNDLRPLLQ 61

Query: 73  ERLEKKLEQ-YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG---MGDVL 128
           +     LE       L+  V        + Y+ ++         +  L+  G    G  +
Sbjct: 62  DSATAILEAPDIGDELQERVLPVFKKHYENYIPDVPGEGAGGGVSAYLLAAGFSQGGPWI 121

Query: 129 -----------EPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                        + G  AIGSG   A  A   L   + +   +
Sbjct: 122 VEINPNGLIGRYEDVGFHAIGSGAPMAQQAGALLSHFRMTTRTV 165


>gi|195026944|ref|XP_001986373.1| GH21325 [Drosophila grimshawi]
 gi|193902373|gb|EDW01240.1| GH21325 [Drosophila grimshawi]
          Length = 253

 Score = 42.7 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            + T++ +R    VV+A +  +   Q      A ++  + K   +A  AG  AD   + +
Sbjct: 33  RSGTVIGIRGKDCVVLAVEK-IIADQLYEPDAASRIFTIEKNIGMA-IAGLMADGNYVAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADK-TITLVI 121
              ++   +  Q  R+        R+  YL                ++   D+     + 
Sbjct: 91  IARQEAANFRQQFERTIPLKYLCDRVSGYLHAYTLYSAVRPFGLSVLLASWDEADGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
                         A G     A +          + +E+ R
Sbjct: 151 KIEPSGTSFGYYACASGKAKQQAKTEMEKFKFADMNTDELVR 192


>gi|149038061|gb|EDL92421.1| proteasome (prosome, macropain) subunit, beta type 10, isoform
           CRA_a [Rattus norvegicus]
          Length = 193

 Score = 42.7 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 41/142 (28%), Gaps = 25/142 (17%)

Query: 70  TLLERLEKKLEQYPNQLLRSSVELAKDWRM----DKYLRNLEAMILIA--DKTITLVITG 123
                   K+E +     R          +     +Y  ++ A +++   D     + + 
Sbjct: 1   MTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVDLNGPQLYSV 60

Query: 124 MGDVLEPENGVMA------------IGSGGSYALSAARALMSTQNS---AEEIARKAMSI 168
                       A             GSG   A++          +   A+E+  +A++ 
Sbjct: 61  HPHGSYSRLPFTALAAADFRCPFPPAGSGQDAAVALLEDRFQPNMTLEAAQELLVEAIT- 119

Query: 169 AADI--CVYTNHNIVLETLKVG 188
            A I   + +  ++    +  G
Sbjct: 120 -AGILGDLGSGGSVDACVITAG 140


>gi|68065582|ref|XP_674774.1| proteasome subunit [Plasmodium berghei strain ANKA]
 gi|56493564|emb|CAH97608.1| proteasome subunit, putative [Plasmodium berghei]
          Length = 241

 Score = 42.7 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 53/172 (30%), Gaps = 25/172 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
                + ++     V+A + +      + K        K+ +L +   +A F+G +ADA 
Sbjct: 28  KGGCAVAIKSSNFAVLAVEKK-----NIPKLQNPRTTEKLVKLDEHTCLA-FSGLNADAR 81

Query: 70  TLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTI 117
            L+ +   + ++Y   + +       +  +A+  +   +   +    +        +   
Sbjct: 82  ILVNKTRLECQRYYLNMDQPAPVDYIAKYVARIQQKFTHRGGVRPFGIATLITGFKNNKE 141

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
             +       +       AIG                     E   +A KA+
Sbjct: 142 ICIYQTEPSGIYASWKAQAIGKNAKVVQEFLEKNYQENMEKNECLLLALKAI 193


>gi|322368955|ref|ZP_08043522.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
 gi|320551686|gb|EFW93333.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
          Length = 249

 Score = 42.7 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 49/177 (27%), Gaps = 20/177 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
             +  + VR    VV+A   +      +      K+ ++     +  AG    +      
Sbjct: 34  RGSVSVGVRTRDGVVLAA-RKHVRSPLLEADGIEKLHKIDDHLGVVSAGHVADARRLVDF 92

Query: 72  LERLEKKLEQYPNQL------LRSSVELAKDWRMDKYLRNLEAMILIADKTI-------- 117
             R  +       +        ++  +  +++      R   A +L+             
Sbjct: 93  GRRRAQTDRLRYGEPIGVEPFTKAVTDHVQEFTQQGGARPFGAALLVGGVEPTTADEDPK 152

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAAD 171
             +          E    AIG+          A    Q    S  E+A  A++ A D
Sbjct: 153 PRLFETDPSGTPHEWRATAIGANDDTVREYLEANYDPQSSVQSGIELALSALADAED 209


>gi|62897513|dbj|BAD96696.1| proteasome alpha 2 subunit variant [Homo sapiens]
          Length = 234

 Score = 42.7 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|12850076|dbj|BAB28582.1| unnamed protein product [Mus musculus]
          Length = 234

 Score = 42.7 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|302926362|ref|XP_003054281.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735222|gb|EEU48568.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 292

 Score = 42.7 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 5/133 (3%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  V+       AN R         ++  ++G   D    ++
Sbjct: 33  NGGTSIGIRCKDGVVLAVEKVVASKLLKPGANKRIATVDSHLGVV--YSGMVPDGRHFVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R   + + +               RM  YL   +A  +        +   +G    PE  
Sbjct: 91  RARDEAQSWRQNFRTPIPTSDLATRMGGYL---QAYTMYGSVRPFGITAIVGGFDTPEET 147

Query: 134 VMAIGSGGSYALS 146
            +    G      
Sbjct: 148 PVDGEVGSGPKCG 160


>gi|268566085|ref|XP_002639630.1| C. briggsae CBR-PBS-7 protein [Caenorhabditis briggsae]
 gi|187029479|emb|CAP31335.1| CBR-PBS-7 protein [Caenorhabditis briggsae AF16]
          Length = 251

 Score = 42.7 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 52/190 (27%), Gaps = 38/190 (20%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T+++ ++    VV+  D  VS G+     N  +  ++ +  ++  F G  AD       
Sbjct: 17  GTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNEN-VLIAFGGDHADFHGFKMS 75

Query: 75  LEKKL-----------EQYPNQLLRSSV-----ELAKDWRMDKYLRNLEAMILIA----- 113
              K             ++      +        LA      +  R  +   +       
Sbjct: 76  SNAKYFSGNASIKILGRKHSTDTSLAFSTEGENFLAHAIVKIRIFRRCKMNPVWNTLVVA 135

Query: 114 ----------DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ------NS 157
                     + +   +          +   +A G G      A       +        
Sbjct: 136 GVEEEEKNNKETSTPFIGVITQKGCAYQVKHIATGLGAYLLNQAVEDEWRKKGEDLSRED 195

Query: 158 AEEIARKAMS 167
           AE + RK++ 
Sbjct: 196 AEAVLRKSLE 205


>gi|242045416|ref|XP_002460579.1| hypothetical protein SORBIDRAFT_02g031180 [Sorghum bicolor]
 gi|241923956|gb|EER97100.1| hypothetical protein SORBIDRAFT_02g031180 [Sorghum bicolor]
          Length = 249

 Score = 42.7 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 51/192 (26%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSVRKIACLDTHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           R   + + +   +            +A   +       +    L               +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEVAVMTKKD 214


>gi|4506181|ref|NP_002778.1| proteasome subunit alpha type-2 [Homo sapiens]
 gi|77736269|ref|NP_001029834.1| proteasome subunit alpha type-2 [Bos taurus]
 gi|73981673|ref|XP_533078.2| PREDICTED: similar to Proteasome subunit alpha type 2 (Proteasome
           component C3) (Macropain subunit C3) (Multicatalytic
           endopeptidase complex subunit C3) isoform 1 [Canis
           familiaris]
 gi|109066745|ref|XP_001097325.1| PREDICTED: proteasome subunit alpha type-2 [Macaca mulatta]
 gi|114613026|ref|XP_528026.2| PREDICTED: proteasome subunit alpha type-2 [Pan troglodytes]
 gi|291394714|ref|XP_002713818.1| PREDICTED: proteasome alpha 2 subunit [Oryctolagus cuniculus]
 gi|296209134|ref|XP_002751405.1| PREDICTED: proteasome subunit alpha type-2-like [Callithrix
           jacchus]
 gi|297680577|ref|XP_002818066.1| PREDICTED: proteasome subunit alpha type-2-like [Pongo abelii]
 gi|301776050|ref|XP_002923446.1| PREDICTED: proteasome subunit alpha type-2-like [Ailuropoda
           melanoleuca]
 gi|332239355|ref|XP_003268869.1| PREDICTED: proteasome subunit alpha type-2-like isoform 1 [Nomascus
           leucogenys]
 gi|332239357|ref|XP_003268870.1| PREDICTED: proteasome subunit alpha type-2-like isoform 2 [Nomascus
           leucogenys]
 gi|130850|sp|P25787|PSA2_HUMAN RecName: Full=Proteasome subunit alpha type-2; AltName:
           Full=Macropain subunit C3; AltName: Full=Multicatalytic
           endopeptidase complex subunit C3; AltName:
           Full=Proteasome component C3
 gi|108860903|sp|Q3T0Y5|PSA2_BOVIN RecName: Full=Proteasome subunit alpha type-2
 gi|220024|dbj|BAA00657.1| proteasome subunit C3 [Homo sapiens]
 gi|29126971|gb|AAH47697.1| Proteasome (prosome, macropain) subunit, alpha type, 2 [Homo
           sapiens]
 gi|47496581|emb|CAG29313.1| PSMA2 [Homo sapiens]
 gi|51094758|gb|EAL24005.1| proteasome (prosome, macropain) subunit, alpha type, 2 [Homo
           sapiens]
 gi|74268007|gb|AAI02207.1| Proteasome (prosome, macropain) subunit, alpha type, 2 [Bos taurus]
 gi|119614558|gb|EAW94152.1| proteasome (prosome, macropain) subunit, alpha type, 2, isoform
           CRA_b [Homo sapiens]
 gi|119614559|gb|EAW94153.1| proteasome (prosome, macropain) subunit, alpha type, 2, isoform
           CRA_b [Homo sapiens]
 gi|158254740|dbj|BAF83343.1| unnamed protein product [Homo sapiens]
 gi|261860700|dbj|BAI46872.1| proteasome (prosome, macropain) subunit, alpha type, 2 [synthetic
           construct]
 gi|296488326|gb|DAA30439.1| proteasome subunit alpha type-2 [Bos taurus]
 gi|312153106|gb|ADQ33065.1| proteasome (prosome, macropain) subunit, alpha type, 2 [synthetic
           construct]
          Length = 234

 Score = 42.7 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|1709759|sp|P49722|PSA2_MOUSE RecName: Full=Proteasome subunit alpha type-2; AltName:
           Full=Macropain subunit C3; AltName: Full=Multicatalytic
           endopeptidase complex subunit C3; AltName:
           Full=Proteasome component C3
 gi|897784|emb|CAA49782.1| proteasome, 25 kDa subunit [Mus musculus]
          Length = 234

 Score = 42.7 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|46107362|ref|XP_380740.1| hypothetical protein FG00564.1 [Gibberella zeae PH-1]
          Length = 296

 Score = 42.7 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 52/197 (26%), Gaps = 44/197 (22%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + +R    VV+A +  VS    ++K  A K       ++ A  +G   D    ++R
Sbjct: 34  GGTSIGIRAKDGVVLAIEKVVS--SKLLKPGANKRIATVDSHVGAVSSGMVPDGRHFVDR 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI------------------------ 110
              + + +               RM  YL+                              
Sbjct: 92  ARDEAQSWRQNFKTPIPTSDLASRMGGYLQAYTMYGSVRPFGITAILGGYDTPEETPVDG 151

Query: 111 -------------LIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA--LMSTQ 155
                        +        +       +       A G G   A +      L +  
Sbjct: 152 EVGSGPKVGAGGKVEGKHGGPFLYMIEPSGMYWGYYGAATGKGRQVAKAELEKLDLAAGN 211

Query: 156 NSAEEIARKA---MSIA 169
            S E+  ++A   + IA
Sbjct: 212 MSLEDAVKQAARIIYIA 228


>gi|221219952|gb|ACM08637.1| Proteasome subunit alpha type-7 [Salmo salar]
          Length = 247

 Score = 42.7 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 51/170 (30%), Gaps = 23/170 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ Q   +    K+  L     +A      ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAQLQEERTVCKICTLDDHVCMA-----FADARIVIN 83

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWR-----------MDKYLRNLEAMILIADKT-ITLVI 121
           R   + + +   +                         +    + A+I+  D      + 
Sbjct: 84  RARVECQSHRLTVEDPVTVEYITRHIATLKQRYTQSNGRRPFGISALIVGFDCDGTPRLY 143

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
                         AIG                   +T N + ++A KA+
Sbjct: 144 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIATDNESIKLAIKAL 193


>gi|8394063|ref|NP_058975.1| proteasome subunit alpha type-2 [Rattus norvegicus]
 gi|134031994|ref|NP_032970.2| proteasome subunit alpha type-2 [Mus musculus]
 gi|130851|sp|P17220|PSA2_RAT RecName: Full=Proteasome subunit alpha type-2; AltName:
           Full=Macropain subunit C3; AltName: Full=Multicatalytic
           endopeptidase complex subunit C3; AltName:
           Full=Proteasome component C3
 gi|5757867|gb|AAD50623.1|AF099733_1 proteasome subunit C3 [Mus musculus]
 gi|203203|gb|AAA40838.1| proteasome component C3 protein [Rattus norvegicus]
 gi|12848669|dbj|BAB28045.1| unnamed protein product [Mus musculus]
 gi|20070847|gb|AAH26768.1| Proteasome (prosome, macropain) subunit, alpha type 2 [Mus
           musculus]
 gi|26330760|dbj|BAC29110.1| unnamed protein product [Mus musculus]
 gi|74150581|dbj|BAE32314.1| unnamed protein product [Mus musculus]
 gi|74198623|dbj|BAE39787.1| unnamed protein product [Mus musculus]
 gi|74207151|dbj|BAE30769.1| unnamed protein product [Mus musculus]
 gi|74225230|dbj|BAE31553.1| unnamed protein product [Mus musculus]
 gi|148700791|gb|EDL32738.1| proteasome (prosome, macropain) subunit, alpha type 2 [Mus
           musculus]
 gi|149032537|gb|EDL87415.1| rCG45322 [Rattus norvegicus]
          Length = 234

 Score = 42.7 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|312217175|emb|CBX97124.1| hypothetical protein [Leptosphaeria maculans]
          Length = 357

 Score = 42.7 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 53/195 (27%), Gaps = 42/195 (21%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG---------FAGS 64
           +  T + ++    VV+A +  VS       AN +++  + +   I           F   
Sbjct: 101 NGGTAVGIKCKDGVVLALEKLVSSKLLKAGAN-KRIATVDRNMGIVSSGLLPDGRHFVSR 159

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI------- 117
           + D      +L  K     + L       A+ + +   +R      +IA           
Sbjct: 160 ARDEAAQWRQL-YKAPIPVSSLADRMGSYAQAYTLYSSVRPFGITAIIAGWDSEEELPVD 218

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARA--LMS 153
                                   +       L       A G G   A S      L  
Sbjct: 219 AQVGSGPKVGSGGKKEGAKHGGPSLYMIEPSGLYWGYYGAATGKGRQIAKSELEKLNLAD 278

Query: 154 TQNSAEEIARKAMSI 168
            + S E+  ++A  I
Sbjct: 279 GELSLEDGVKEAARI 293


>gi|74193793|dbj|BAE22828.1| unnamed protein product [Mus musculus]
          Length = 247

 Score = 42.7 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|290461979|gb|ADD24037.1| Proteasome subunit alpha type-7 [Lepeophtheirus salmonis]
          Length = 125

 Score = 42.7 bits (99), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 2/86 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   VVV+  + +        +   RK+  L    ++  FAG +ADA  L+ 
Sbjct: 30  KGSTAVGVRGKDVVVLGVEKKAVPKLQ-EERTVRKICLLDDH-VVMAFAGLTADARILVN 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRM 99
           R   + + +   +          WR+
Sbjct: 88  RGRIECQSHKLTVEGKRSPRTTLWRL 113


>gi|317037422|ref|XP_001399133.2| proteasome component C1 [Aspergillus niger CBS 513.88]
          Length = 297

 Score = 42.7 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 5/133 (3%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++    ++K  A K       ++    AG   D    + 
Sbjct: 33  NGGTAIGIRCKDGVVLAVEKIIT--SKLLKPGANKRIATVDRHVGIVSAGLVPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R   +   + +         A   R+  Y+   +A  L +      V   +G        
Sbjct: 91  RARDEASSWRSVYKGPIPTSALSNRLGSYV---QAYTLYSSVRPFGVTAIVGGWDSEAEL 147

Query: 134 VMAIGSGGSYALS 146
            +    G      
Sbjct: 148 AVDGQVGSGPKAG 160


>gi|195455623|ref|XP_002074799.1| GK22956 [Drosophila willistoni]
 gi|194170884|gb|EDW85785.1| GK22956 [Drosophila willistoni]
          Length = 262

 Score = 42.7 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  +++A + + +         + K+ RL +  +   AG    +      
Sbjct: 30  HAGTCLGILAEDGILLAAECRSTNKLLDNAIPSEKIYRLNENMVCSVAGITADANVLTAE 89

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++ +          QL+    ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-----NSAEEIARKAM 166
                         IG+    A+S  +  ++ +       A+++A K +
Sbjct: 150 SDPSGNYGGWKATCIGNNFGAAISMLKQELADKENIKLEEAKDLAVKVL 198


>gi|4581735|gb|AAD24750.1| proteasome subunit LMP7 [Bos taurus]
          Length = 56

 Score = 42.7 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 18/52 (34%)

Query: 109 MILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           MI   DK    +     +       + + GSG S+A     +      S EE
Sbjct: 1   MICGWDKKGPGLYYVDENGTRLSGNMFSTGSGNSHAYGVMDSGYRPDLSIEE 52


>gi|170579539|ref|XP_001894874.1| proteasome subunit alpha type 4 [Brugia malayi]
 gi|158598377|gb|EDP36283.1| proteasome subunit alpha type 4, putative [Brugia malayi]
          Length = 226

 Score = 42.7 bits (99), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 46/166 (27%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +     ++IA + +        +    K+ RL        AG    +      
Sbjct: 6   HAGTCLGILASDGILIAAEKRNVHKLLDDEVLTEKIYRLADNIACTVAGITADANILINH 65

Query: 72  LERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L       +          QL+++     + +      R     +L           +  
Sbjct: 66  LRFWAADYKYSYGEHIPVEQLVQTLCNEKQRYTQVGGKRPFGVSLLYMGWDQHFGYQLYQ 125

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS-TQN-SAEEIARKAM 166
                         IG+    A+S  +          A+++A K +
Sbjct: 126 SDPSGNYTGWKATCIGNNHQAAVSLLKQEYKSPDLVEAKKLAMKVL 171


>gi|225714244|gb|ACO12968.1| Proteasome subunit alpha type-3 [Lepeophtheirus salmonis]
 gi|290462773|gb|ADD24434.1| Proteasome subunit alpha type-3 [Lepeophtheirus salmonis]
 gi|290561098|gb|ADD37951.1| Proteasome subunit alpha type-3 [Lepeophtheirus salmonis]
          Length = 256

 Score = 42.7 bits (99), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 14/165 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T + +R    VV A +  +        +N R         I     G  +D  TL +  
Sbjct: 35  GTAIGLRGKDGVVFAAEKIIKSKLYEPSSNPRIF--DVNRQIGCVVTGLYSDCRTLADYA 92

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTI-TLVITG 123
            ++   + +Q  +         R+  Y+                M+   D+     + + 
Sbjct: 93  GREANDFLSQYGKGVPVKYLTERVGDYMHLYTLYSSHRPFGANVMLGSYDEIQGPQLYSI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       A G     A +    +   + + +E+ R+A  I
Sbjct: 153 DPSGVSYGYWGCAAGKAKEAAKTEIEKIPFKEMTCKELIREAAKI 197


>gi|193580210|ref|XP_001945150.1| PREDICTED: proteasome subunit alpha type-3-like [Acyrthosiphon
           pisum]
          Length = 253

 Score = 42.7 bits (99), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 15/173 (8%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             A+K   T I+ +     VV A    V   +       +++  +     +A   GS+AD
Sbjct: 28  FKAIKNSGTAIV-LCGSDGVVFAVVRLVKS-KLYEDCTGKRLFSVEDHIGMA-VGGSTAD 84

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLR-----------NLEAMILIAD-K 115
           A  +L    ++   Y             + R+ +YLR               +I   D +
Sbjct: 85  ASAILNVAREEARSYRQNYSMPISLEYLNERVSEYLRIHTLYSYIRPFGCTVIIGSYDPQ 144

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       +       AIG     A +    L     + +E+ ++A+ I
Sbjct: 145 DGPQMYMIDPAGVSFGYFGCAIGEAKQTAQTEIEKLNLNTMTCKELIKEAVKI 197


>gi|312217178|emb|CBX97127.1| hypothetical protein [Leptosphaeria maculans]
          Length = 133

 Score = 42.7 bits (99), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/120 (10%), Positives = 31/120 (25%), Gaps = 8/120 (6%)

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI----TLVITGMG-DVLEPE 131
            +L +  N   ++   L      +K         +IA          +        ++  
Sbjct: 2   YRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDSIGCIDFA 61

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKVG 188
              +  G+           L       E++     +A+  A D    +     +  ++  
Sbjct: 62  KDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQALLNAVDRDALSGWGAHVYIIEKD 121


>gi|86170740|ref|XP_966075.1| proteasome subunit alpha type 2, putative [Plasmodium falciparum
           3D7]
 gi|46361040|emb|CAG25327.1| proteasome subunit alpha type 2, putative [Plasmodium falciparum
           3D7]
          Length = 235

 Score = 42.7 bits (99), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 50/158 (31%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLERLE 76
           L +R    V+IA + + S  + + + +  K++++ +   I  AG  G          +  
Sbjct: 36  LGIRAKNGVIIATEKK-SPNELIEENSIFKIQQISEHIGIVYAGMPGDFRVLLKRARKEA 94

Query: 77  KKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDVL 128
            +            +L++    + +++     +R     +LI   D     +        
Sbjct: 95  IRYSLQYGSEILVKELVKIIASIVQEFTQTGGVRPFGLSLLICGVDVYGYHLYQIDPSGC 154

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   +G      +S      +     E+    A+
Sbjct: 155 YFNWMATCVGKDYQNNMSFLEKRYNKDIEIEDAIHTAI 192


>gi|83286579|ref|XP_730224.1| multicatalytic endopeptidase Y13180 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23489884|gb|EAA21789.1| Y13180 multicatalytic endopeptidase [Plasmodium yoelii yoelii]
          Length = 278

 Score = 42.7 bits (99), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/172 (12%), Positives = 53/172 (30%), Gaps = 25/172 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAF 69
                + ++     V+A + +      + K        K+ +L +   +A F+G +ADA 
Sbjct: 65  KGGCAVAIKSSNFAVLAVEKK-----NIPKLQNPRTTEKLVKLDEHTCLA-FSGLNADAR 118

Query: 70  TLLERLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTI 117
            L+ +   + ++Y   + +       +  +A+  +   +   +    +        +   
Sbjct: 119 ILVNKTRLECQRYYLNMDQPAPVDYIAKYVARIQQKFTHRGGVRPFGIATLITGFKNNKE 178

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
             +       +       AIG                     E   +A KA+
Sbjct: 179 ICIYQTEPSGIYASWKAQAIGKNAKVVQEFLEKNYQENMEKNECLLLALKAI 230


>gi|148704620|gb|EDL36567.1| proteasome (prosome, macropain) subunit, alpha type 3, isoform
           CRA_e [Mus musculus]
          Length = 269

 Score = 42.7 bits (99), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 47  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 104

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 105 IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLY 164

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 165 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 211


>gi|118576184|ref|YP_875927.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
 gi|118194705|gb|ABK77623.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
          Length = 245

 Score = 42.7 bits (99), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 38/155 (24%), Gaps = 17/155 (10%)

Query: 14  HATTILTVRKDGVVVIAGD---GQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             T  + V+  G +VIA +    ++     +     +  +      + A      A +  
Sbjct: 33  RGTIAVGVKSTGGIVIAVEEKPRRL----QISDTIQKIFQVDDHLGVAAAGYIPDARSQV 88

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDW-------RMDKYLRNLEAMILIA---DKTITLV 120
              R   +  +           +AK              +R     ++I    D     +
Sbjct: 89  ENARFFSQSNRMMYDESVEVEAVAKHLADQCQQFTQYAGVRPFGVALIIGGVDDGGKGQL 148

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                         +AIG+G               
Sbjct: 149 FLTDPSGTYISYDAIAIGAGSEQVTEFLEKSYKPG 183


>gi|255634578|gb|ACU17651.1| unknown [Glycine max]
          Length = 192

 Score = 42.3 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 13/135 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    VVIA + ++     V +A+ +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVVIATEKKLPS-ILVDEASVQKIQLLTPNIGVV-YSGMGPDFRVLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ EQY           QL+R    + +++     +R     +L+A  D     +   
Sbjct: 90  SRKQAEQYHRLYKEPIPVTQLVREVAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIG 138
                       A+G
Sbjct: 150 DPSGSYFSWKASAMG 164


>gi|115477683|ref|NP_001062437.1| Os08g0548900 [Oryza sativa Japonica Group]
 gi|75131289|sp|Q6YT00|PSA7A_ORYSJ RecName: Full=Proteasome subunit alpha type-7-A; AltName: Full=20S
           proteasome alpha subunit D-1; AltName: Full=20S
           proteasome subunit alpha-4-A
 gi|158513652|sp|A2YXU2|PSA7A_ORYSI RecName: Full=Proteasome subunit alpha type-7-A; AltName: Full=20S
           proteasome alpha subunit D-1; AltName: Full=20S
           proteasome subunit alpha-4-A
 gi|1930070|gb|AAB51521.1| proteasome alpha subunit [Oryza sativa Indica Group]
 gi|42407555|dbj|BAD10760.1| proteasome alpha subunit [Oryza sativa Japonica Group]
 gi|42407804|dbj|BAD08948.1| proteasome alpha subunit [Oryza sativa Japonica Group]
 gi|113624406|dbj|BAF24351.1| Os08g0548900 [Oryza sativa Japonica Group]
 gi|218201567|gb|EEC83994.1| hypothetical protein OsI_30159 [Oryza sativa Indica Group]
 gi|222617941|gb|EEE54073.1| hypothetical protein OsJ_00782 [Oryza sativa Japonica Group]
          Length = 249

 Score = 42.3 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 44/168 (26%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSMRKIASLDTHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           R   + + +   +            +A   +       +    L               +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAM 166
                          A G   +             +     ++A +A+
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSGKETIKLAIRAL 194


>gi|114653227|ref|XP_001164624.1| PREDICTED: proteasome alpha 3 subunit isoform 3 [Pan troglodytes]
          Length = 254

 Score = 42.3 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 55/163 (33%), Gaps = 14/163 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                 +       AIG     A +    L   + +  +I ++
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKE 193


>gi|82700948|ref|YP_418048.1| hypothetical protein PPEV_gp015 [Pseudomonas phage EL]
 gi|82657853|emb|CAG27109.1| hypothetical protein [Pseudomonas phage EL]
          Length = 182

 Score = 42.3 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 58/180 (32%), Gaps = 29/180 (16%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG-QTVMKANARKVRR---------LGKGNIIAGFAGSS 65
           TTI        V +A D +V  G   +     RK+            G   I  G +GS 
Sbjct: 2   TTI---AYRDGV-MAADTRVVNGADMINLGEQRKIHEPGEGEYWSVNGDRIICFGLSGSL 57

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           +D     E L + +     +       +     +          ++ A K     +    
Sbjct: 58  SDLLAFKELLSEGI---TFKTKAPDHLVGDSNMLC-VGEQGNVWLVSAFKQRDGSMVFTV 113

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             ++P     AIGSGG YA S      S        A  A+ +A  + +++   I    L
Sbjct: 114 SCVQPP---FAIGSGGIYASSVMAVGKS--------AVDAVKVACKLDIFSGGRIDTWEL 162


>gi|195341688|ref|XP_002037438.1| GM12106 [Drosophila sechellia]
 gi|194131554|gb|EDW53597.1| GM12106 [Drosophila sechellia]
          Length = 257

 Score = 42.3 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 23/192 (11%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTLLER 74
            T + +     V++A +  V     +M  +    R      ++     G+ AD   L+ +
Sbjct: 32  GTCVGILAKNGVLLATERSV---DKLMDTSIPVPRISTLNEDMACCATGNMADGNVLVAQ 88

Query: 75  LEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L    +QY           QL+RS  ++ + +      R      L           +  
Sbjct: 89  LRLSTQQYLVNFGEMIPCEQLVRSLCDIKQAYTQYGGKRPFGVSFLYMGWDRRFGFQLYQ 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-------NSAEEIARKAMSIAADICVY 175
                      V  IG     A+   +  + ++         A+++A K M +  D    
Sbjct: 149 SDPSGNYSGWKVTCIGRKSGAAMEMLQNELFSKGYVCPSLEEAKDVAIKVMGMTLDRGSL 208

Query: 176 TNHNIVLETLKV 187
           T  N+ + +++ 
Sbjct: 209 TPANLEIASIQR 220


>gi|38051991|gb|AAH60576.1| Proteasome (prosome, macropain) subunit, alpha type 2 [Rattus
           norvegicus]
          Length = 234

 Score = 42.3 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGIGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|312083349|ref|XP_003143825.1| proteasome subunit alpha type 2 [Loa loa]
 gi|307761015|gb|EFO20249.1| proteasome subunit alpha type 2 [Loa loa]
          Length = 235

 Score = 42.3 bits (98), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 54/162 (33%), Gaps = 10/162 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLERLE 76
           + +R    VV+A + ++S    V+  +  KV ++ +       G             +L 
Sbjct: 37  VGLRASDGVVLATENKIS----VLYEDQPKVEKISQHIGCVYSGMGPDYRILVKKARKLA 92

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMA 136
            + E    + + ++  + K           ++  +       LV     +       +  
Sbjct: 93  MEYELMYGEEIPTTQLVTK--LAAVMQEYTQSGGVRPFGVSMLVAGWDHEPSPGRPLLFQ 150

Query: 137 IGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC--VYT 176
               G+Y    A AL     +A+    K  S A ++   ++T
Sbjct: 151 CDPSGAYFAWKATALGKNDVNAKTFLEKRFSDALELDDGIHT 192


>gi|309807631|ref|ZP_07701575.1| ATP-dependent protease subunit ClpQ domain protein [Lactobacillus
          iners LactinV 01V1-a]
 gi|308169128|gb|EFO71202.1| ATP-dependent protease subunit ClpQ domain protein [Lactobacillus
          iners LactinV 01V1-a]
          Length = 41

 Score = 42.3 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/31 (51%), Positives = 21/31 (67%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANA 46
          TTI  VR  G + IAGDGQV+LG+ V+  + 
Sbjct: 2  TTICAVRHKGKIAIAGDGQVTLGEKVIAKST 32


>gi|255938676|ref|XP_002560108.1| Pc14g01140 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211584729|emb|CAP74255.1| Pc14g01140 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 271

 Score = 42.3 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 50/195 (25%), Gaps = 42/195 (21%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++    ++K  A K       ++    AG   D    + 
Sbjct: 11  NGGTAVGIRCKDGVVLAVEKIIT--SKLLKPGANKRIATVDRHVGIVSAGLVPDGRHFVS 68

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKY---------LRNLEAMILIADKTI------- 117
           R   +   + +         A   R+  Y         +R      ++            
Sbjct: 69  RARDEASSWRSTYKGPIPTSAIANRLGGYVQAYTLYSSVRPFGVTAIVGGWDTEAELPVD 128

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--S 153
                                   +       L       A G G   A +    L   S
Sbjct: 129 GQVGNGPKSGSGGKVEGAKAGGPGLYMIEPSGLYWGYYGAATGKGRQAAKAELEKLDLSS 188

Query: 154 TQNSAEEIARKAMSI 168
              S  +  ++A  I
Sbjct: 189 GNLSLADGVKEAARI 203


>gi|198468365|ref|XP_002134014.1| GA27033 [Drosophila pseudoobscura pseudoobscura]
 gi|198146380|gb|EDY72641.1| GA27033 [Drosophila pseudoobscura pseudoobscura]
          Length = 198

 Score = 42.3 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/151 (10%), Positives = 44/151 (29%), Gaps = 5/151 (3%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             +++ +  +  V IA D  +         +   + ++     +A  +G   D   +  R
Sbjct: 9   GGSVVAMAGNECVAIATDHIILHDGEKYDYDYGNLFQVHPYIYVA-LSGCEQDIIRVRNR 67

Query: 75  LEKKLEQYPNQLL----RSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           +  +   + N       ++     K+ R+  Y        L  +     +    G     
Sbjct: 68  MLLRQNMFGNVTPEIYAKNLSNYLKEPRLKPYQIESVVAGLNTETVEPFICGVNGSGELL 127

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
            +   +         +  +AL        ++
Sbjct: 128 NSEDFSASGKCPSIGTMCKALWKPDLKPTDL 158


>gi|24652204|ref|NP_724834.1| proteasome alpha7 subunit [Drosophila melanogaster]
 gi|12643254|sp|Q9V5C6|PSA3_DROME RecName: Full=Proteasome subunit alpha type-3; AltName: Full=20S
           proteasome subunit alpha-7
 gi|7303843|gb|AAF58889.1| proteasome alpha7 subunit [Drosophila melanogaster]
 gi|17862568|gb|AAL39761.1| LD38389p [Drosophila melanogaster]
 gi|220944694|gb|ACL84890.1| Prosalpha7-PA [synthetic construct]
 gi|220954628|gb|ACL89857.1| Prosalpha7-PA [synthetic construct]
          Length = 253

 Score = 42.3 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 49/173 (28%), Gaps = 18/173 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
            + T++ +R    VV+A +  ++       A  R        G  +AG          + 
Sbjct: 33  KSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIA 92

Query: 73  ERLEKKLEQYPNQLLR------SSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITG 123
            +      Q   Q +               + +   +R     I++A         +   
Sbjct: 93  RQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLYKI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVY 175
                    G  A  SG +  L+      +      +E+       A +I +Y
Sbjct: 153 EPSGSS--FGYFACASGKAKQLAKTEMEKLKMDMRTDELVE----SAGEI-IY 198


>gi|322824538|gb|EFZ29917.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
          Length = 119

 Score = 42.3 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 9/107 (8%), Positives = 24/107 (22%), Gaps = 15/107 (14%)

Query: 97  WRMDKYLRNLEAMILIADKTITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALM- 152
               +         ++            +               GS  S+       L+ 
Sbjct: 1   MLYQRRFFPYYTFNMVVGLDEKGAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLT 60

Query: 153 ----------STQNSA-EEIARKAMSIAADICVYTNHNIVLETLKVG 188
                         +   E+ + A + AA+  ++T   +    +   
Sbjct: 61  RQHMVQQAPAELSMTETLEMLKNAFTGAAERDIFTGDAVCFHIITAD 107


>gi|209732692|gb|ACI67215.1| Proteasome subunit alpha type-4 [Salmo salar]
          Length = 261

 Score = 42.3 bits (98), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 17/192 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA + L +  +  V++A + +           + K+ +L +       AG ++DA  L  
Sbjct: 30  HAGSRLEILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMA-CSAAGITSDANVLTN 88

Query: 74  RLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VI 121
            L    ++Y           QL+ +  ++ + +      R     +L           + 
Sbjct: 89  ELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYMGWDKHYGFQLY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN----SAEEIARKAMSIAADICVYTN 177
                          IG+  + A+S  +           SA  +A K ++   D+   + 
Sbjct: 149 QSDPSGNYGGWKATCIGNNSAAAVSMLKQGFKEGEMSLSSALALAVKVLNKTMDVSKLSA 208

Query: 178 HNIVLETLKVGD 189
             + + TL   D
Sbjct: 209 EKVEIATLTRED 220


>gi|225714258|gb|ACO12975.1| Proteasome subunit alpha type-3 [Lepeophtheirus salmonis]
 gi|290462269|gb|ADD24182.1| Proteasome subunit alpha type-3 [Lepeophtheirus salmonis]
          Length = 256

 Score = 42.3 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 14/165 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            T + +R    VV A +  +        +N R         I     G  +D  TL +  
Sbjct: 35  GTAIGLRGKDGVVFAAEKIIKSKLYEPSSNPRIF--DVNRQIGCVVTGLYSDCRTLADYA 92

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTI-TLVITG 123
            ++   + +Q  +         R+  Y+                M+   D+     + + 
Sbjct: 93  GREANDFLSQYGKGVPVKYLTERVGDYMHLYTLYSSHRPFGANVMLGSYDEIQGPQLYSI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       A G     A +    +   + + +E+ R+A  I
Sbjct: 153 DPSGVSYGYWGCAAGKAKEAAKTEIEKIPFEEMTCKELIREAAKI 197


>gi|164657816|ref|XP_001730034.1| hypothetical protein MGL_3020 [Malassezia globosa CBS 7966]
 gi|159103928|gb|EDP42820.1| hypothetical protein MGL_3020 [Malassezia globosa CBS 7966]
          Length = 250

 Score = 42.3 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 52/164 (31%), Gaps = 14/164 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT L ++    VVIA + +      V  +   KV  +     I  ++G   D   LL R
Sbjct: 36  GTTSLGIKASNAVVIATEKRPPS-PLVDDSAIEKVALVCPNIGIV-YSGMGPDFRILLAR 93

Query: 75  LEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             K  + Y            L++    + +D      +R     +L+A         +  
Sbjct: 94  TRKIAQSYWKIFGEYPTTKVLVQEIATVMQDATQSGGVRPFGVSLLVAGFDAVRGPSLYQ 153

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        A+G   + A +      S   S E+    A+
Sbjct: 154 VDPSGSYFMWKATAMGKNMTNAKTFLEKRYSDDISLEDAIHTAI 197


>gi|332239739|ref|XP_003269056.1| PREDICTED: proteasome subunit alpha type-2-like [Nomascus
           leucogenys]
          Length = 234

 Score = 42.3 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV+ + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVKPITKYIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGD 126
           L ++            QL++    + ++      +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEHTQSGGVRPFGVSLLICGRNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|147905680|ref|NP_001080243.1| proteasome (prosome, macropain) subunit, alpha type, 3 [Xenopus
           laevis]
 gi|27371303|gb|AAH41518.1| Psma3-prov protein [Xenopus laevis]
          Length = 255

 Score = 42.3 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 44/165 (26%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T +++R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAISIRCKDGVVFGVEKLVLSKLYEEGSNKRIFNVDRHVGMAVAGLLADARSLADIA 92

Query: 73  ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITG 123
                              L       A  + +   +R      ++          +   
Sbjct: 93  REEASNFRANYGYDIPLKHLSDRVAMYAHAYTLYSAVRPFGCSFMLGSYNEDDGAQLYMV 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L   + +  ++ ++   I
Sbjct: 153 DPSGISYGYWGCAIGKAKQAAKTEIEKLQMKELTCRDVVKEVAKI 197


>gi|148704619|gb|EDL36566.1| proteasome (prosome, macropain) subunit, alpha type 3, isoform
           CRA_d [Mus musculus]
          Length = 189

 Score = 42.3 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 53/164 (32%), Gaps = 14/164 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +   
Sbjct: 8   TAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLADIAR 65

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVITGM 124
           ++   + +    +        R+  Y+                 +   +      +    
Sbjct: 66  EEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMID 125

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              +       AIG     A +    L   + +  ++ ++   I
Sbjct: 126 PSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 169


>gi|167043664|gb|ABZ08357.1| putative proteasome A-type and B-type [uncultured marine
           crenarchaeote HF4000_APKG2O16]
          Length = 244

 Score = 42.3 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 53/187 (28%), Gaps = 14/187 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T  L ++    ++ A D +      ++    +  +      I A      A       
Sbjct: 32  RGTIALGIKTKYGIIFAADERP-RKLQIVDEPQKLFKIDQHIGIAAAGYIPDARKQVDDA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKD-------WRMDKYLRNLEAMILIADKTITL--VITGM 124
           R   +  +       S   + K        +      R +   ++I         +    
Sbjct: 91  RFFSQSSKIVYDESVSVETVTKHIADQCQQYTQYAGARPIGVSLIIGGVDQNGNSLFLTD 150

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAADICVYTNHNIV 181
                     +AIG+         +     + + EE   +A  ++++ +D     + +I 
Sbjct: 151 PSGTYIPYNAVAIGADSDRVTEFLKKHYKPEMTLEESKMLAISSINMVSD-DAKGSEHIK 209

Query: 182 LETLKVG 188
           +  ++  
Sbjct: 210 ISQIESD 216


>gi|303272415|ref|XP_003055569.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463543|gb|EEH60821.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 255

 Score = 42.3 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 15/177 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +    L ++    VV+  +  ++    V  +N R++  + +   +AG  G + DA  ++ 
Sbjct: 33  NGGLALGIKCKDGVVLGVEKLLAFKMLVPGSN-RRIAAVDRHAGMAG-TGLAPDARAIVT 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL-----------EAMILIADKTITLVIT 122
           R  ++  QY +             RM  YL                ++ + D  +   + 
Sbjct: 91  RARQECAQYLSFYGDRIPAKILADRMAHYLHMFTLYWSVRPFGASTLLAVKDHELGYALY 150

Query: 123 GMGDVLEPENGV-MAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH 178
            +    E +     A+G G   A +    L+    +     R A+   A I VY+ H
Sbjct: 151 LLEPSGEVQRYFGTAVGKGRQAAKNEIEKLVKADAAGSLSCRDAVKHLARI-VYSTH 206


>gi|261824000|ref|NP_035314.3| proteasome subunit alpha type-3 [Mus musculus]
 gi|3914438|sp|O70435|PSA3_MOUSE RecName: Full=Proteasome subunit alpha type-3; AltName:
           Full=Macropain subunit C8; AltName: Full=Multicatalytic
           endopeptidase complex subunit C8; AltName:
           Full=Proteasome component C8; AltName: Full=Proteasome
           subunit K
 gi|5757655|gb|AAD50534.1|AF060089_1 proteasome subunit C8 [Mus musculus]
 gi|3037091|gb|AAC12943.1| proteasome alpha7/C8 subunit [Mus musculus]
 gi|61403555|gb|AAH91743.1| Proteasome (prosome, macropain) subunit, alpha type 3 [Mus
           musculus]
 gi|74214276|dbj|BAE40382.1| unnamed protein product [Mus musculus]
 gi|74224914|dbj|BAE38179.1| unnamed protein product [Mus musculus]
          Length = 255

 Score = 42.3 bits (98), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|255719244|ref|XP_002555902.1| KLTH0H00528p [Lachancea thermotolerans]
 gi|238941868|emb|CAR30040.1| KLTH0H00528p [Lachancea thermotolerans]
          Length = 261

 Score = 42.3 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 49/163 (30%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + V     VV+  + +V+    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGVATSEGVVLGVEKRVTS-PLLEGDSIEKIVEIERHVGCAMSGLTADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTIT 118
                    Y ++      L +S  +LA         + R+      +  +I   D    
Sbjct: 93  RVSSVTHNLYYDEDISIESLTQSICDLALRFGEGASGEERLMSRPFGVALLIAGYDSEQG 152

Query: 119 L-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A S  +    +  + +E
Sbjct: 153 YQLYHAEPSGTFYRYNAKAIGSGSEGAQSELQNEWHSSLTLKE 195


>gi|149737130|ref|XP_001496754.1| PREDICTED: similar to multicatalytic proteinase subunit K isoform 1
           [Equus caballus]
          Length = 255

 Score = 42.3 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +             R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYDIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|219519732|gb|AAI44773.1| Psma8 protein [Mus musculus]
          Length = 210

 Score = 42.3 bits (98), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 14/172 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIS 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVI 121
           R   + + +   +            +A   +            + A      D  I  + 
Sbjct: 88  RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
                       V+  G          R       SA+EI  +   I  +  
Sbjct: 148 QTDPSGTYHAWKVVQSGGKNIELAIIRRDQPLKMFSAKEIELEVSEIEREKD 199


>gi|30580480|sp|Q8X077|PSA2_NEUCR RecName: Full=Probable proteasome subunit alpha type-2
 gi|18376026|emb|CAB91760.2| probable 20S proteasome subunit Y7 [Neurospora crassa]
          Length = 249

 Score = 42.3 bits (98), Expect = 0.037,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 50/163 (30%), Gaps = 12/163 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    +V+A + + S       ++  K+  +     +            +   
Sbjct: 31  GVTALGIKATNGIVLATEKK-SSSPLADPSSLSKISLITPNIGMVYSGMGPDYRVLVDRA 89

Query: 75  -------LEKKLEQYP--NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
                   ++   +YP    L++    + ++      +R     +LIA  D+   ++   
Sbjct: 90  RKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWDEGGPMLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       AIG   + A +      +     E+    A+
Sbjct: 150 DPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDAVHIAL 192


>gi|8394066|ref|NP_058976.1| proteasome subunit alpha type-3 [Rattus norvegicus]
 gi|76573881|ref|NP_001004094.1| proteasome subunit alpha type-3 [Rattus norvegicus]
 gi|291403942|ref|XP_002718317.1| PREDICTED: proteasome alpha 3 subunit isoform 1 [Oryctolagus
           cuniculus]
 gi|130860|sp|P18422|PSA3_RAT RecName: Full=Proteasome subunit alpha type-3; AltName:
           Full=Macropain subunit C8; AltName: Full=Multicatalytic
           endopeptidase complex subunit C8; AltName:
           Full=Proteasome component C8; AltName: Full=Proteasome
           subunit K
 gi|56639|emb|CAA39457.1| multicatalytic proteinase subunit K [Rattus rattus]
 gi|203207|gb|AAA40840.1| proteasome component C8 [Rattus norvegicus]
 gi|220879|dbj|BAA14302.1| proteasome subunit C8 [Rattus rattus]
 gi|51980649|gb|AAH81817.1| Proteasome (prosome, macropain) subunit, alpha type 3 [Rattus
           norvegicus]
 gi|149051387|gb|EDM03560.1| rCG61627, isoform CRA_a [Rattus norvegicus]
          Length = 255

 Score = 42.3 bits (98), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|224105175|ref|XP_002313714.1| predicted protein [Populus trichocarpa]
 gi|118484589|gb|ABK94168.1| unknown [Populus trichocarpa]
 gi|118489627|gb|ABK96615.1| unknown [Populus trichocarpa x Populus deltoides]
 gi|222850122|gb|EEE87669.1| predicted protein [Populus trichocarpa]
          Length = 249

 Score = 42.3 bits (98), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 52/192 (27%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR   +VV+  + + +        + +K+  L     +   AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDIVVLGVEKKSTAKLQ-DSRSVKKIVSLDDHVALVC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + Y   +               L + +     +R      LI           +
Sbjct: 87  KARIECQSYRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPHLGVPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGAFSAWKANATGRNSNSMREFLEKNFKETSGQETVKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +    
Sbjct: 203 KNIEIAVMTKDQ 214


>gi|296085223|emb|CBI28718.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score = 42.3 bits (98), Expect = 0.038,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 58  IAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR--------MDKYLRNLEAM 109
           + G +G   D     E ++K +  Y  +        A            + K    +  +
Sbjct: 8   LLGASGEGGDRAQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYAVNIL 67

Query: 110 ILIADKTI-TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
           +   DK I   +          +    A G G  ++L+       +  + EE  
Sbjct: 68  LAGYDKDIGPSLYYIDYIASLHKIEKGAFGYGSYFSLAMMDRHYHSGMTVEEAV 121


>gi|198470322|ref|XP_002133422.1| GA22826 [Drosophila pseudoobscura pseudoobscura]
 gi|198145395|gb|EDY72050.1| GA22826 [Drosophila pseudoobscura pseudoobscura]
          Length = 126

 Score = 42.3 bits (98), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN 56
            TTI  +     V+IA   + + G  +    ++K+ RL    
Sbjct: 85  GTTIAGLTIRDGVIIATHIRETSGSMIRTGRSKKIFRLHDNI 126


>gi|62858493|ref|NP_001016382.1| proteasome (prosome, macropain) subunit, alpha type, 2 [Xenopus
           (Silurana) tropicalis]
 gi|147906258|ref|NP_001084053.1| proteasome subunit alpha type-2 [Xenopus laevis]
 gi|130852|sp|P24495|PSA2_XENLA RecName: Full=Proteasome subunit alpha type-2; AltName:
           Full=Macropain subunit C3; AltName: Full=Multicatalytic
           endopeptidase complex subunit C3; Short=xC3; AltName:
           Full=Proteasome component C3
 gi|233668|gb|AAB19485.1| proteasome subunit XC3 [Xenopus laevis]
 gi|48735053|gb|AAH72254.1| Psma2 protein [Xenopus laevis]
 gi|89273986|emb|CAJ82081.1| proteasome (prosome macropain) subunit alpha type 2 [Xenopus
           (Silurana) tropicalis]
 gi|163916406|gb|AAI57164.1| hypothetical protein LOC549136 [Xenopus (Silurana) tropicalis]
          Length = 234

 Score = 41.9 bits (97), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 57/161 (35%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +A KV  + K   +  ++G   D   L+ R  
Sbjct: 36  VGIKATNGVVLATEKK---QKSILYDEQSAHKVEPITKHIGMV-YSGMGPDYRVLVRRAR 91

Query: 77  KKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D+    +     
Sbjct: 92  KLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 152 SGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|316968093|gb|EFV52428.1| multicatalytic endopeptidase [Trichinella spiralis]
          Length = 307

 Score = 41.9 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 21/173 (12%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           HA T L++     +++  + +++      +A   K+ RL   +II   AG +ADA  L+ 
Sbjct: 73  HAGTCLSLISKEGIIMVAENRITNKLLDDEAAQEKIYRL-NSDIICSVAGITADANVLVA 131

Query: 74  RLEKKLEQYPNQLLRS-------------SVELAKDWRMDKYLRNLEAMILIADKTITL- 119
            L ++ ++Y  +                   +  + +      R     IL         
Sbjct: 132 MLRQQAQKYAQEYSVQYGESIPVEFLVSGMCDYKQAYTQYGGKRPFGVSILYGGWDTHFG 191

Query: 120 --VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAM 166
             +                IG+    A+   +     +    +S + +A K M
Sbjct: 192 YQLYQSDPSGNYTGWKASCIGNNSQAAIPFLQQDYDYETATLDSIKNLAMKVM 244


>gi|170290986|ref|YP_001737802.1| proteasome subunit alpha [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175066|gb|ACB08119.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 239

 Score = 41.9 bits (97), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 10/159 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    VV+    +      +     +  R       IA              R+E +
Sbjct: 38  IGMKCKDGVVLLAVRK--YLSPLATPPEKIYRIDEHIGAIAAGLVGDGLVLIERGRMEAQ 95

Query: 79  LEQYPNQLLRSSVELAKDWRMDK-------YLRNLEAMILIAD-KTITLVITGMGDVLEP 130
             +       +   LAK   + K        LR    MI+I        +          
Sbjct: 96  YNRLIYGEPITVKNLAKRLALYKQQFTQYAGLRPFGVMIIIGGIDEGPELYVTHPGGAYY 155

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
           +    A+G          R     + S +E  + A+ +A
Sbjct: 156 DYAAFAVGKNSDKVNETFRQSFKQEFSLDECIKYAVKVA 194


>gi|195332257|ref|XP_002032815.1| GM20751 [Drosophila sechellia]
 gi|195581346|ref|XP_002080495.1| GD10216 [Drosophila simulans]
 gi|164430287|gb|ABY55471.1| Prosalpha6 [Drosophila mauritiana]
 gi|164430289|gb|ABY55472.1| Prosalpha6 [Drosophila mauritiana]
 gi|164430291|gb|ABY55473.1| Prosalpha6 [Drosophila mauritiana]
 gi|164430293|gb|ABY55474.1| Prosalpha6 [Drosophila mauritiana]
 gi|188504196|gb|ACD56216.1| PROSalpha6 [Drosophila simulans]
 gi|188504198|gb|ACD56217.1| PROSalpha6 [Drosophila simulans]
 gi|188504200|gb|ACD56218.1| PROSalpha6 [Drosophila simulans]
 gi|188504202|gb|ACD56219.1| PROSalpha6 [Drosophila simulans]
 gi|188504204|gb|ACD56220.1| PROSalpha6 [Drosophila sechellia]
 gi|194124785|gb|EDW46828.1| GM20751 [Drosophila sechellia]
 gi|194192504|gb|EDX06080.1| GD10216 [Drosophila simulans]
          Length = 244

 Score = 41.9 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 40/161 (24%), Gaps = 10/161 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V +      R     G  + G    S          
Sbjct: 38  TTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRMADSRSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
                    Y   +      +A   ++      +  +          ++    V      
Sbjct: 98  AANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                     +G+    A S          S E+  + A++
Sbjct: 158 GYFSGFKACCVGAKTLEANSYLEKKYKPNLSEEKAIQLAIT 198


>gi|145351695|ref|XP_001420203.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580436|gb|ABO98496.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 238

 Score = 41.9 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 48/162 (29%), Gaps = 13/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +    + VR     VIA +  V         N R            G +G + D   + +
Sbjct: 33  NGGLTVGVRCADGCVIACEKLVPSKLHTPGTNRRVCAVARH--AGMGGSGYNPDLKAVRD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   +  QY +    +        RM  Y                +++ + D     +  
Sbjct: 91  RARAECAQYKSFYGDAIPAKVLADRMAHYYHLFTLYWSVRPFGCSSVLAVKDFDGYHLYL 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
              +    +     +G G S A +    L  ++ +  E  ++
Sbjct: 151 LEQNGECAKMKGACVGKGKSAAKTEVEKLNFSEITCAEAVKE 192


>gi|301766946|ref|XP_002918903.1| PREDICTED: proteasome subunit beta type-6-like [Ailuropoda
           melanoleuca]
          Length = 120

 Score = 41.9 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 6/94 (6%)

Query: 98  RMDKYLRNLEAMILIADKTI---TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
              +Y  +L A I+IA         V +     +         GSG SY      A    
Sbjct: 1   MCYRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYRE 60

Query: 155 QNSAEEIAR---KAMSIAADICVYTNHNIVLETL 185
             + EE  +    A+++A +    +   I L  +
Sbjct: 61  GMTKEECLQFTANALALAMERDGSSGGVIRLAAI 94


>gi|238580855|ref|XP_002389422.1| hypothetical protein MPER_11450 [Moniliophthora perniciosa FA553]
 gi|215451670|gb|EEB90352.1| hypothetical protein MPER_11450 [Moniliophthora perniciosa FA553]
          Length = 248

 Score = 41.9 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + +R    +V+A +  V     V +AN R+++ + K   +A  AG  AD   L  
Sbjct: 33  NSGTAIGLRVKDGIVLAVEKLVHSKLLVPEAN-RRIQTVDKHIGLAT-AGLLADGRQLAN 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTITLVI--- 121
           R + +   Y +     +       R+  Y+         R      +I      +     
Sbjct: 91  RAKDESSSYRDNFRAPAPLKYIADRLGSYMQVYTLYSSVRPFGISTIIGGVDEIIAYFSM 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           T        +  V+ +G G   A +    L  ++ +  E    A  I
Sbjct: 151 TLEPHWTNRDTTVLPVGKGRQLAKTELEKLKLSELTTREAVMPAARI 197


>gi|170585040|ref|XP_001897296.1| proteasome subunit beta type 2 [Brugia malayi]
 gi|158595293|gb|EDP33858.1| proteasome subunit beta type 2, putative [Brugia malayi]
          Length = 202

 Score = 41.9 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 47/165 (28%), Gaps = 19/165 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSL--GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + +     V++A D +     G  V+  +  K   LG    +    G   D     +  +
Sbjct: 8   IGICTKDYVILAAD-RSCFAHGAIVVADDEEKKFILGDKLAMICI-GEDGDVAQFGDWCK 65

Query: 77  KKLEQYPNQLLRSSVELA-----------KDWRMDKYLRNLEAMILIADKTITLVITGMG 125
           + ++ Y  +        +                D Y+ +       + +    + +   
Sbjct: 66  RNIQLYKLRYGYEMSPRSSHHWIRRSIAEALRTQDYYVVDTLIGGYDSIENKAFLGSVDY 125

Query: 126 -DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                 +   +  G  G    S       +  S E+   + +K +
Sbjct: 126 LGNGIIDQPYIFRGFSGRLCYSILDKTYRSDMSEEDGIGLLKKCL 170


>gi|198416000|ref|XP_002127847.1| PREDICTED: similar to proteasome subunit C2 [Ciona intestinalis]
          Length = 280

 Score = 41.9 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/167 (11%), Positives = 51/167 (30%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++     V+    +      +     +K+ ++     I+  +G ++DA +L   
Sbjct: 32  GSATIGLKSKTHAVLVALKRA-QSDLIAHQ--KKIEKISPHIGIS-ISGLTSDARSLGNY 87

Query: 75  LEKKLEQYPN--QLLRSSVELAKD---------WRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +            L             R  +    +  ++   D+    +   
Sbjct: 88  MRSECMHHEFLFNTRLPVSRLVAAVGDKTQTPTQRYGRRPFGVGILVAGFDEKGPHIYQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
                      MAIGS    A +     ++     + EE+ R  ++ 
Sbjct: 148 CPSANYYNCKAMAIGSRSQSARTYLERHLNEFADCTPEELVRHGLTA 194


>gi|320166776|gb|EFW43675.1| proteasome subunit alpha type-2 [Capsaspora owczarzaki ATCC 30864]
          Length = 235

 Score = 41.9 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 16/165 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            TT + ++    VVIA + ++ +    + +++ +KV  +    +   ++G   D+  LL 
Sbjct: 31  GTTSVGIKAVNGVVIATEKKLPTA--LIDESSLQKVSSI-NDKVGFVYSGMGPDSRVLLR 87

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVI 121
           +  K  +QY           QL+R    + +++     +R     +L+A         + 
Sbjct: 88  KARKIAQQYYTTYGESMPTSQLVREVASVMQEYTQSGGVRPFGVSLLVAGYDSVKGPSLY 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                         AIG     A +      +     E+    A+
Sbjct: 148 QVDPSGSYWAWKASAIGKNMLNARTFLEKRYTETIELEDAIHTAI 192


>gi|17945494|gb|AAL48800.1| RE23081p [Drosophila melanogaster]
          Length = 279

 Score = 41.9 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++     V+    + +     +    RK+  +     I+  AG +ADA  L   
Sbjct: 32  GTATVGLKNKDYAVLVALCKPTSE---LSDTQRKIIPIDDHLGIS-IAGLTADARVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +       + R    L         R D+    +  ++   D+    +   
Sbjct: 88  LRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
                       +IGS    A +     ++    +S +EI    +  
Sbjct: 148 TPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIHHGIRA 194


>gi|224078277|ref|XP_002305514.1| predicted protein [Populus trichocarpa]
 gi|118484702|gb|ABK94221.1| unknown [Populus trichocarpa]
 gi|222848478|gb|EEE86025.1| predicted protein [Populus trichocarpa]
          Length = 249

 Score = 41.9 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 52/192 (27%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR   +VV+  + + +        + +K+  L     +   AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDIVVLGVEKKSTAKLQ-DSRSVKKIVSLDDHVALVC-AGLKADARVLVN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           +   + + Y   +               L + +     +R      LI           +
Sbjct: 87  KARIECQSYRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPHLGVPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGAFSAWKANATGRNSNSMREFLEKNYKETSGQGTVKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +    
Sbjct: 203 KNIEIAVMTKDQ 214


>gi|77735429|ref|NP_001029407.1| proteasome subunit alpha type-3 [Bos taurus]
 gi|75060507|sp|Q58DU5|PSA3_BOVIN RecName: Full=Proteasome subunit alpha type-3
 gi|61553092|gb|AAX46349.1| proteasome alpha 3 subunit isoform 1 [Bos taurus]
 gi|81673669|gb|AAI09555.1| Proteasome (prosome, macropain) subunit, alpha type, 3 [Bos taurus]
 gi|296483084|gb|DAA25199.1| proteasome subunit alpha type-3 [Bos taurus]
          Length = 255

 Score = 41.9 bits (97), Expect = 0.044,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|326514224|dbj|BAJ92262.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 249

 Score = 41.9 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 53/192 (27%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTVVLGVEKKSTPKLQ-DSRSVRKIASLDTHVALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIAD----KTITLV 120
           R   + + +   +               L + + +   +R      LI           +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTLSGGVRPFGLSTLIVGFDPYTDKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++  +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKDTSGKETIKLTIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEIAVMTKKD 214


>gi|198429197|ref|XP_002123939.1| PREDICTED: similar to Proteasome subunit alpha type-2 (Proteasome
           component C3) (Macropain subunit C3) (Multicatalytic
           endopeptidase complex subunit C3) [Ciona intestinalis]
          Length = 233

 Score = 41.9 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 53/161 (32%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  +     I  ++G   D   LL R  
Sbjct: 35  VGIKAQDGVVMATEKK---QKSILYDEHSIHKVEAVTDKIGIV-YSGMGPDYRVLLTRAR 90

Query: 77  KKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMG 125
           K  + Y           QL++    + +++     +R     +LI   D     +     
Sbjct: 91  KIAQLYYRQYQESIPTTQLVQRIASVMQEYTQSGGVRPFGVSLLICGWDDNRPYLFQCDP 150

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       S      + +   ++    A+
Sbjct: 151 SGAYFAWKATAMGKNHLNGKSFLEKRYNEELQLDDAVHTAI 191


>gi|149704781|ref|XP_001495250.1| PREDICTED: similar to Proteasome subunit alpha type-2 (Proteasome
           component C3) (Macropain subunit C3) (Multicatalytic
           endopeptidase complex subunit C3) [Equus caballus]
          Length = 234

 Score = 41.9 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVESITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|320101502|ref|YP_004177094.1| proteasome endopeptidase complex subunit alpha [Desulfurococcus
           mucosus DSM 2162]
 gi|319753854|gb|ADV65612.1| proteasome endopeptidase complex, alpha subunit [Desulfurococcus
           mucosus DSM 2162]
          Length = 246

 Score = 41.9 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 15/159 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
              T + +R     ++A + + ++    V +   +K+ ++    + A +AG + D   L+
Sbjct: 34  RGWTTIGIRTKSASIVAAEKRKIT--PLVDEKAIQKIFKIDDH-VGASYAGMAGDGRILI 90

Query: 73  ERLEKK--LEQYPNQLLRSSVELAK-------DWRMDKYLRNLEAMILIA--DKTITLVI 121
                +  L ++          LAK        +     +R     ++IA  D+  T + 
Sbjct: 91  NYAISQALLHRFYYDEPAPVEYLAKLVCDVKQAYTQHAGVRPFGVAMIIAGVDEKGTQLF 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                         AIG   +  +             +E
Sbjct: 151 MTEPSGRYLSYYATAIGEKSNNVIEFLEKNYKYDLDVDE 189


>gi|241742039|ref|XP_002414154.1| proteasome, subunit beta, putative [Ixodes scapularis]
 gi|215508008|gb|EEC17462.1| proteasome, subunit beta, putative [Ixodes scapularis]
          Length = 80

 Score = 41.9 bits (97), Expect = 0.046,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 14/31 (45%)

Query: 158 AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           A  I +     AA+  +YT  ++++  +   
Sbjct: 38  AISIIKDVFISAAERDIYTGDSVIVNIIDKD 68


>gi|255579983|ref|XP_002530826.1| proteasome subunit alpha type, putative [Ricinus communis]
 gi|223529618|gb|EEF31566.1| proteasome subunit alpha type, putative [Ricinus communis]
          Length = 249

 Score = 41.9 bits (97), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 45/168 (26%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR   VVV+  + + +          RK+  L     +   AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDVVVLGVEKKSTAKLQDA-RTVRKIVSLDNHVALVC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +               L + +     +R      LI           +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGIPSL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAM 166
                          A G   +             +     ++A +A+
Sbjct: 147 YQTDPSGAFSAWKANATGRNSNSMREFLEKNYKETSGQETVKLAIRAL 194


>gi|194034201|ref|XP_001928025.1| PREDICTED: proteasome subunit alpha type-3 isoform 1 [Sus scrofa]
 gi|301754433|ref|XP_002913059.1| PREDICTED: proteasome subunit alpha type-3-like isoform 1
           [Ailuropoda melanoleuca]
          Length = 255

 Score = 41.9 bits (97), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|189182100|gb|ACD81826.1| IP21535p [Drosophila melanogaster]
          Length = 262

 Score = 41.9 bits (97), Expect = 0.047,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 57/187 (30%), Gaps = 23/187 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTLLER 74
            T + +     V++A +  V     +M  +    R      NI     G++AD   L+ +
Sbjct: 43  GTCVGLLAKNGVLLATERSV---DKLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQ 99

Query: 75  LEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L    +QY           QL+ +  ++ + +      R      L           +  
Sbjct: 100 LRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQ 159

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-------NSAEEIARKAMSIAADICVY 175
                         IG     A+   +  + ++         A+++A K M +       
Sbjct: 160 SDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMGMTLGRDSL 219

Query: 176 TNHNIVL 182
           T   + +
Sbjct: 220 TPEKLEI 226


>gi|145503751|ref|XP_001437849.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405007|emb|CAK70452.1| unnamed protein product [Paramecium tetraurelia]
          Length = 249

 Score = 41.9 bits (97), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 46/156 (29%), Gaps = 14/156 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ V+    V++AG+ Q    + +     +++  +     +A   G   D   +L+R +
Sbjct: 34  TVIGVKCKDGVILAGEKQ-KFSRLLEDNTNKRIYNIDTQTGMA-ICGKLPDGRNILQRAK 91

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------------ILIADKTITLVITGM 124
            +  QY +     +       R+ +Y+                            +    
Sbjct: 92  AESSQYQDMYAIPASANVLSDRVAQYVHAYTMYSGARPFGSATFIASYNTFDGYELFMIE 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
               +        G G +   S          + +E
Sbjct: 152 PSGNKYAYHACTHGKGRAVCKSEFERRSFKDLTCQE 187


>gi|149239006|ref|XP_001525379.1| proteasome component PRE6 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450872|gb|EDK45128.1| proteasome component PRE6 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 258

 Score = 41.9 bits (97), Expect = 0.048,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 58/175 (33%), Gaps = 16/175 (9%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           +  + + +L     +    K++++    ++A FAG +ADA  L+++   + + +   L  
Sbjct: 51  LGCERRTTLKLQDPRTTPSKIQKIDHHILLA-FAGLNADARILIDKARVEAQSHRLNLED 109

Query: 89  SSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLVITGMGDVLEPENGVM 135
           +         +A   +            +        A  T+  +       +       
Sbjct: 110 AVTVDYLTKYVAGVQQQYTQSGGTRPFGIATLIAGFDALDTVPKLYQTEPSGVYNAWKAH 169

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNH-NIVLETLKVGD 189
           AIG                  S +E  +  +    ++ V T   NI +  +K G+
Sbjct: 170 AIGRSAKTVNEFLEKQWKDGMSEDETVKLTVKSLLEV-VQTGAKNIEISVMKAGE 223


>gi|302802518|ref|XP_002983013.1| hypothetical protein SELMODRAFT_422384 [Selaginella moellendorffii]
 gi|300149166|gb|EFJ15822.1| hypothetical protein SELMODRAFT_422384 [Selaginella moellendorffii]
          Length = 547

 Score = 41.9 bits (97), Expect = 0.049,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 67/194 (34%), Gaps = 28/194 (14%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSL----GQTVMK-ANARKVRRLGKGNII-AGFAGSSA 66
            H T  L V      ++  D   ++    G  V K  N +K+  +     +  GFAG+ A
Sbjct: 205 FHGTIGLAVFCKQGFIVLFDSLTTVTGDDGGVVEKRRNFKKIVEVRSEPRLRVGFAGNVA 264

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI---TG 123
            +  +++ L+ KL +    L  ++  L K   +                   LV+    G
Sbjct: 265 ASLQVIKLLQVKLSRKELTLHEAAKFLTKKAGLYATTDPDFVASFFVYNESMLVMVKNDG 324

Query: 124 MGDVLEP---ENGVMAIGSGGSYALSAARALMSTQN--------SAEEIARKAMSIA--- 169
            G        E+ VMAIGSG   A    R  +  QN         A  +   A + A   
Sbjct: 325 NGYKTTELTNEHSVMAIGSGAQQAQVILRQPVRGQNHGKEASVGEALSLGLDAFAQACIE 384

Query: 170 -----ADICVYTNH 178
                 D+CV    
Sbjct: 385 NPECGGDLCVIDGS 398


>gi|156100829|ref|XP_001616108.1| 20S proteasome subunit alpha type 2 [Plasmodium vivax SaI-1]
 gi|148804982|gb|EDL46381.1| 20S proteasome subunit alpha type 2, putative [Plasmodium vivax]
          Length = 235

 Score = 41.5 bits (96), Expect = 0.050,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLERLE 76
           L +R    V+IA + + S  + + + +  K++++ +   I  AG  G          +  
Sbjct: 36  LGIRAKNGVIIATEKK-SPNELIEENSIYKIQQISEHIGIVYAGMPGDFRVLLKRARKEA 94

Query: 77  KKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
            +             L++    + +++     +R     +LI   D     +        
Sbjct: 95  IRYSLQYGNEILVKELVKEIASIVQEFTQTGGVRPFGLSLLICGIDAYGYHLYQIDPSGC 154

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   IG      +S      S+    E+    A+
Sbjct: 155 YFNWLATCIGKDYQNNISFLEKRYSSDIEVEDAIHTAI 192


>gi|125809137|ref|XP_001361000.1| GA15805 [Drosophila pseudoobscura pseudoobscura]
 gi|195154060|ref|XP_002017940.1| GL17442 [Drosophila persimilis]
 gi|54636173|gb|EAL25576.1| GA15805 [Drosophila pseudoobscura pseudoobscura]
 gi|194113736|gb|EDW35779.1| GL17442 [Drosophila persimilis]
          Length = 244

 Score = 41.5 bits (96), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 43/161 (26%), Gaps = 10/161 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V ++     R   + G  + G    +          
Sbjct: 38  TTVALKSGDCAVVATQKKVTEKNIVPESVTHLFRITKEIGCAMTGRIADARSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
                    Y   +      +A   ++      +  +          D+    V      
Sbjct: 98  AANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDDEIGPSVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                    ++G+    A S          S E+  + A++
Sbjct: 158 GYFSGFKACSVGAKVLEANSYLEKKYKNNLSEEKAIQLAIT 198


>gi|145545572|ref|XP_001458470.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426290|emb|CAK91073.1| unnamed protein product [Paramecium tetraurelia]
          Length = 142

 Score = 41.5 bits (96), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             + L ++ +  VV+AG+ +++    +   +  K+  +         +G   DA TL+E 
Sbjct: 34  GASALAIKVNDGVVLAGERKLNS-TLLEPRSIEKIYEIDTHIA-CTASGFIPDARTLVEH 91

Query: 75  LEKKLEQYPNQLLRSSVELA 94
              + + +           A
Sbjct: 92  ARVESQNHKFNYGEPINVRA 111


>gi|222480582|ref|YP_002566819.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453484|gb|ACM57749.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
           49239]
          Length = 268

 Score = 41.5 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 49/168 (29%), Gaps = 15/168 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV     + S    +   +  K+ +L         AG  ADA  L++
Sbjct: 35  RGAPSVGVRTADGVVFVAMSRPSS-TLMEAESIEKLHKLDDHLG-TASAGHVADARQLID 92

Query: 74  RLEKKLEQYPNQLLRSS---------VELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
              ++ +    +               +  ++       R   A +LI   D     +  
Sbjct: 93  LARRQSQGNRLRYGEPVGVETLTKFVTDHIQENTQRGGTRPYGAALLIGGIDNGEPRLFA 152

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
                   E     IG G S          + + S +      ++IAA
Sbjct: 153 ADPSGTPNEWKATVIGGGRSDIQGHLEENWTEELSLDAGVE--LAIAA 198


>gi|149051388|gb|EDM03561.1| rCG61627, isoform CRA_b [Rattus norvegicus]
          Length = 201

 Score = 41.5 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 42/165 (25%), Gaps = 10/165 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N R        G  +AG    +     + 
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIA 92

Query: 73  ERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIAD---KTITLVITG 123
                              L          + +   +R      ++          +   
Sbjct: 93  REEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMI 152

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L   + +  ++ ++   I
Sbjct: 153 DPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|39972865|ref|XP_367823.1| proteasome subunit alpha type 3 [Magnaporthe oryzae 70-15]
 gi|145012494|gb|EDJ97148.1| proteasome subunit alpha type 3 [Magnaporthe oryzae 70-15]
          Length = 292

 Score = 41.5 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 57/201 (28%), Gaps = 45/201 (22%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  V+    ++K  A K       ++   ++G   D    ++
Sbjct: 33  NGGTSVGIRCKDGVVLAVEKVVT--SKLLKPGANKRIATVDRHLGVAYSGMIPDGRHFVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKTI------- 117
           R   +   + +             RM  YL         R      ++A           
Sbjct: 91  RARDEARSWRDTFKTPIGTPELASRMGGYLQAYTLYQSVRPFGITAIVAGWDSSLELPVD 150

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                                   +       L       A G G   A +    L    
Sbjct: 151 AEVGVGPSCGAGGKSTDKKYGGPQLYMIEPSGLYWGYYGAATGKGRQAAKAELEKL---D 207

Query: 156 NSAEEIA-RKAMSIAADICVY 175
            S + I+  +A+  AA I +Y
Sbjct: 208 LSGDGISLEQAVKEAARI-IY 227


>gi|324504016|gb|ADY41734.1| Proteasome subunit alpha type-2 [Ascaris suum]
          Length = 215

 Score = 41.5 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 16/165 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLERLE 76
           + +R    VV+A + + S    ++  +  K+ +L +       G             ++ 
Sbjct: 17  VGLRASDGVVLATENKAS----ILYEDQAKIEKLSRHIGCVYSGMGPDYRILVKKGRKIA 72

Query: 77  KKLEQYPNQLLRS---SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
            + E    + + +     +LA   +       +    +           G G  L     
Sbjct: 73  MQYELMYGEEIPTTQLVTKLAAVMQEYTQSGGVRPFGVSMLIAGWDTEPGNGRPL----L 128

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC--VYT 176
                SG  +A   A AL     +A+    K  S A ++   ++T
Sbjct: 129 FQCDPSGAYFAW-KATALGKNDVNAKTFLEKRFSDALELDDGIHT 172


>gi|195124155|ref|XP_002006559.1| GI21124 [Drosophila mojavensis]
 gi|193911627|gb|EDW10494.1| GI21124 [Drosophila mojavensis]
          Length = 792

 Score = 41.5 bits (96), Expect = 0.051,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 58/174 (33%), Gaps = 27/174 (15%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            + ++ V  DG +++A              +   +       I      +  D   L++ 
Sbjct: 20  GSVMVGVSFDGGIILAV------------NSVNNLIYYLDDQIYCCANSAGYDREMLIDA 67

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVI--TGMGDVLEPEN 132
              KLE       R  V    +     Y +     +L+A + +T +   T  G       
Sbjct: 68  -SSKLENSRASNSRILVSQVVELISRLYEKADPTELLVAGEDVTGLYLVTVTGPQTVTLV 126

Query: 133 GVMAIG---SGGSYALSAARALMSTQNS---AEEIARK------AMSIAADICV 174
              A+G   +G +      ++      S   AE +AR+      A  + AD+C+
Sbjct: 127 DFAALGDGAAGPTGPAEYLKSHWQPAMSLKQAEALARQTVTLGGAQRLCADVCI 180


>gi|328771136|gb|EGF81176.1| hypothetical protein BATDEDRAFT_10771 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 246

 Score = 41.5 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 15/158 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTLLE 73
             T + ++    VVIA + ++    +++  ++   +      NI   ++G   DA  LL+
Sbjct: 31  GITSIGIKAKNGVVIATEKKI---PSILVDDSTLAKVSPISANIGMVYSGMGPDARLLLD 87

Query: 74  RLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVIT 122
           +  K  ++Y            L++    + +++     +R     +LIA  D+T   +  
Sbjct: 88  KARKSSQEYKRIYCQEPPTAMLVKEVASVMQEYTQSGGVRPFGVSLLIAGIDETGPTLYQ 147

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                        AIG     A +      +     E+
Sbjct: 148 VDPSGSYWAWKASAIGKNMVNARTFLEKRYNETMEIED 185


>gi|268559264|ref|XP_002637623.1| Hypothetical protein CBG19367 [Caenorhabditis briggsae]
 gi|187024587|emb|CAP36632.1| hypothetical protein CBG_19367 [Caenorhabditis briggsae AF16]
          Length = 239

 Score = 41.5 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 57/180 (31%), Gaps = 21/180 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + V+ D V VIA   +V     +++ +   + R+    +     G   DA   ++R +
Sbjct: 33  TAVAVKGDDVAVIAVQKRV-PDSLIVRDSVTSIFRI-SQTVACCAIGIVPDARFQVKRAQ 90

Query: 77  KKL--EQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITGM 124
            +    +Y +        LAK            A +             D+    V    
Sbjct: 91  SEAANFKYKHGYDMPVDLLAKKMADLNQYYTQNAEMRCLGVGLLFVAFDDERGPEVYRVD 150

Query: 125 GDVLEPENGVMAIGSGGSYALSAAR------ALMSTQNSAEEIARKAMSIAADICVYTNH 178
                     +A+G     A           A   + + A E+A +A+  +  I V  N 
Sbjct: 151 PAGYFRGMRGVAMGVKQGPATVCLEKKIKKRAQWDSTHPA-ELAIEALQTSLGIDVRAND 209


>gi|291241557|ref|XP_002740669.1| PREDICTED: proteasome alpha 2 subunit-like isoform 1 [Saccoglossus
           kowalevskii]
          Length = 235

 Score = 41.5 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 19/163 (11%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++V+    +  KV  + K   +  ++G   D   L+ +  
Sbjct: 35  VGIKASNGVVVATEKK---QKSVLYDEQSVHKVESMTKNIGMI-YSGMGPDYRVLVRKAR 90

Query: 77  KKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA----DKTITLVITG 123
           K  +QY           QL++    + +++     +R     +L+A    D+    +   
Sbjct: 91  KIAQQYYLIYQEQIPTSQLVQRVATVMQEYTQSGGVRPFGVSLLVAGWDEDEKKPYLFQC 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                       A+G       +      +     E+    A+
Sbjct: 151 DPSGAYFAWKATAMGKNFVNGKTFLEKRYNEDLELEDAVHTAI 193


>gi|195635203|gb|ACG37070.1| proteasome subunit alpha type 7 [Zea mays]
          Length = 249

 Score = 41.5 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGVDTVVLGVEKKSTPKLQ-DSRSVRKIVSLDTHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +               L + +     +R      LI           +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTQKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEIAVMTHED 214


>gi|67969713|dbj|BAE01205.1| unnamed protein product [Macaca fascicularis]
          Length = 234

 Score = 41.5 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPIIKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|34978952|gb|AAQ83685.1| proteasome subunit alpha-3 [Allium sativum]
          Length = 144

 Score = 41.5 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 38/133 (28%), Gaps = 5/133 (3%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        +  K+ ++       +AG    +      
Sbjct: 11  NAGSAIGILAKDGVVLVGEKKVTSKLLQTSKSTEKMYKIDDHLACAVAGIMSDANILINT 70

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT--ITLVITGMGDVLE 129
              ++ +   +  Q      +L +     K        +     +          G  L 
Sbjct: 71  AR-VQAQRYAFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLY 129

Query: 130 PENGVMAIGSGGS 142
             +    +  G  
Sbjct: 130 MSDPSAIMVDGKP 142


>gi|24651571|ref|NP_651843.1| proteasome alpha3T subunit [Drosophila melanogaster]
 gi|12229947|sp|Q9VA12|PSA4L_DROME RecName: Full=Proteasome subunit alpha type-4-like
 gi|7302012|gb|AAF57116.1| proteasome alpha3T subunit [Drosophila melanogaster]
          Length = 251

 Score = 41.5 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 57/187 (30%), Gaps = 23/187 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTLLER 74
            T + +     V++A +  V     +M  +    R      NI     G++AD   L+ +
Sbjct: 32  GTCVGLLAKNGVLLATERSV---DKLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQ 88

Query: 75  LEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L    +QY           QL+ +  ++ + +      R      L           +  
Sbjct: 89  LRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQ 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-------NSAEEIARKAMSIAADICVY 175
                         IG     A+   +  + ++         A+++A K M +       
Sbjct: 149 SDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMGMTLGRDSL 208

Query: 176 TNHNIVL 182
           T   + +
Sbjct: 209 TPEKLEI 215


>gi|164430285|gb|ABY55470.1| Prosalpha6 [Drosophila mauritiana]
          Length = 244

 Score = 41.5 bits (96), Expect = 0.055,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 40/161 (24%), Gaps = 10/161 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V +      R     G  + G    S          
Sbjct: 38  TTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
                    Y   +      +A   ++      +  +          ++    V      
Sbjct: 98  AANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                     +G+    A S          S E+  + A++
Sbjct: 158 GYFSGFKACCVGAKTLEANSYLEKKYKPNLSEEKAIQLAIT 198


>gi|313217255|emb|CBY38396.1| unnamed protein product [Oikopleura dioica]
          Length = 149

 Score = 41.5 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +      V+A + +++    ++  +  K+  + K  +    +G  ADA T+++R
Sbjct: 34  GSTAIGIHTKEGCVLAVEKRITS-PLIVPTSIEKIFEVDKH-VGCAMSGLIADARTMIDR 91

Query: 75  LEKKLEQYP 83
              + + + 
Sbjct: 92  ARVEAQNHW 100


>gi|170029278|ref|XP_001842520.1| proteasome subunit alpha type 1 [Culex quinquefasciatus]
 gi|167881623|gb|EDS45006.1| proteasome subunit alpha type 1 [Culex quinquefasciatus]
          Length = 282

 Score = 41.5 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 53/162 (32%), Gaps = 17/162 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++     V+    + S     + +  +K+  +     I+  AG +ADA  L   
Sbjct: 32  GSATVGLKNKEYAVLIALKRASSE---LSSYQKKIISIDDHLGIS-IAGITADARILSRY 87

Query: 75  LEKKLEQY------PNQLLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           + ++   Y         + R    +         R D+    +  ++   D     +   
Sbjct: 88  MRQECLNYKYSYDDNYPVGRLIANVGNKMQVCTQRYDRRPYGVGLLVAGYDDQGPHIYQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIAR 163
                  +   M+IGS    A +     ++     + EE+ R
Sbjct: 148 CPSANFFDCKAMSIGSRSQSARTYLEKHLAQFPDCTKEELIR 189


>gi|157876510|ref|XP_001686602.1| proteasome beta 2 subunit [Leishmania major strain Friedlin]
 gi|68129677|emb|CAJ08983.1| putative proteasome beta 2 subunit [Leishmania major strain
           Friedlin]
          Length = 206

 Score = 41.5 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/163 (10%), Positives = 36/163 (22%), Gaps = 19/163 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T +  R    V++A  G  +     +     K+ +L    ++A    +            
Sbjct: 4   TAIAFRCQDYVMVAAAGLNAFYYIKITDAEDKITQLDTHQLVACTGENGPRVNFTEYVKR 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYL-------------------RNLEAMILIADKTI 117
             +     Q  R S   +    M   L                    ++           
Sbjct: 64  NLMLNRMRQHGRHSSCDSTANFMRNCLASAIRSREGAYQVSCLFAGYDMPVSEDDNGAVG 123

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +                 G G  +  +    L     + +E
Sbjct: 124 PQLFYLDYLGTLQAVPYGCHGYGACFVTALLDCLWRPDLTQQE 166


>gi|209732752|gb|ACI67245.1| Proteasome subunit alpha type-2 [Salmo salar]
          Length = 254

 Score = 41.5 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  
Sbjct: 56  VGIKASNGVVLATEKK---QKSILYDETSVHKVEPITKHIGMV-YSGMGPDYRVLLRRAR 111

Query: 77  KKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEA--MILIADKTITLVITGMG 125
           K  +QY           QL++    + +++     +R      +I   D+    +     
Sbjct: 112 KLAQQYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVPLLIAGWDEDRPYLFQSDP 171

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 172 SGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 212


>gi|195132590|ref|XP_002010726.1| GI21700 [Drosophila mojavensis]
 gi|193907514|gb|EDW06381.1| GI21700 [Drosophila mojavensis]
          Length = 101

 Score = 41.5 bits (96), Expect = 0.058,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 20/74 (27%), Gaps = 15/74 (20%)

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALM------------STQNS---AEEIARK 164
           V                +G+  +  L                       +   A  +ARK
Sbjct: 6   VYYYDPIGSYERVRYRVVGTSYALLLPCLDVFYGWENNRLTPPLKDEDLTMTMAVRMARK 65

Query: 165 AMSIAADICVYTNH 178
            + IA+D  +Y+  
Sbjct: 66  CLYIASDRDIYSGD 79


>gi|242081935|ref|XP_002445736.1| hypothetical protein SORBIDRAFT_07g024900 [Sorghum bicolor]
 gi|241942086|gb|EES15231.1| hypothetical protein SORBIDRAFT_07g024900 [Sorghum bicolor]
          Length = 249

 Score = 41.5 bits (96), Expect = 0.059,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 53/192 (27%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGVDTVVLGVEKKSTPKLQ-DSRSVRKIASLDTHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +               L + +     +R      LI           +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTQKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A KA+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIKALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEIAVMTHKD 214


>gi|322502822|emb|CBZ37905.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 41

 Score = 41.5 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 19/36 (52%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVR 50
            +++ ++ +G V++A D  +S G      N  +++
Sbjct: 4  GGSVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIK 39


>gi|302847835|ref|XP_002955451.1| 20S proteasome alpha subunit D [Volvox carteri f. nagariensis]
 gi|300259293|gb|EFJ43522.1| 20S proteasome alpha subunit D [Volvox carteri f. nagariensis]
          Length = 252

 Score = 41.5 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 46/167 (27%), Gaps = 16/167 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + V+    VV+  +   +          RK+ ++     +A FAG +ADA  L  
Sbjct: 30  KGALAVGVKGQDTVVLGVEKISTAKLQDA-RTVRKIIKIDDHICLA-FAGLTADARVLAN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIADK------TITLVI 121
           R   + + Y   L            +A   +       +    +           +  + 
Sbjct: 88  RARVEAQSYRLTLDEKVTVDYITKYIAGVQQRYTQSGGVRPFGISTLIVGFDPLGVPQLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAM 166
                         AIG                ++     ++A +A+
Sbjct: 148 QTDPSGTSSAWKANAIGRNSKTVREFLEKHFVETSGKDTVKLAIRAL 194


>gi|323450099|gb|EGB05982.1| hypothetical protein AURANDRAFT_54387 [Aureococcus anophagefferens]
          Length = 256

 Score = 41.5 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 49/177 (27%), Gaps = 24/177 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + V     VV+  + +            RKV +L +   +A FAG +ADA  L++
Sbjct: 30  KGAATVGVTGATCVVLGVERKAVAKLQ-EARTIRKVVKLDEKITLA-FAGLTADARVLVQ 87

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDK---------YLRNLEAMILIADKT----ITLV 120
           +   + + Y      +         + +          +R      ++A         L+
Sbjct: 88  KARVEAQSYRLTCEDAPSVEYMARFLARTQQRYTQRGGVRPFGVSSILAGFDSASGKPLM 147

Query: 121 ITGMGDVLEPENGV-MAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
                             G              S     +E        A ++CV T
Sbjct: 148 YQIDPSGTYFSWKANAIGGRNSKSMREYLEKEWSAGLQDDE--------ATELCVKT 196


>gi|126697376|gb|ABO26645.1| proteasome alpha type 2 [Haliotis discus discus]
          Length = 235

 Score = 41.5 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 47/159 (29%), Gaps = 11/159 (6%)

Query: 19  LTVRKDGVVVIAGD-GQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + ++    VV+A +  Q S+       N  +      G + +G             +L +
Sbjct: 35  VGIKATNGVVLATEKKQKSVLYDEHSINKVESITKNIGMVYSGMGPDYRVLVRRARKLAQ 94

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA----DKTITLVITGMGDV 127
           +            QL++    + +++     +R     +LIA    D+    +       
Sbjct: 95  QYYLTYQEQIPTAQLVQRVATVMQEFTQSGGVRPFGVSLLIAGWDEDEEKPYLYQCDPSG 154

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      S     E+    ++
Sbjct: 155 AYFAWKATAMGKNQINGKTFLEKRYSESLELEDAVHTSI 193


>gi|145501633|ref|XP_001436797.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403941|emb|CAK69400.1| unnamed protein product [Paramecium tetraurelia]
          Length = 249

 Score = 41.5 bits (96), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 45/156 (28%), Gaps = 14/156 (8%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ V+    V++AG+ Q    + +     +++  +     +A   G   D   +L+R +
Sbjct: 34  TVIGVKCKDGVILAGEKQ-KFSRLLEDNTNKRIYNIDTQTGMA-ICGKLPDGRNILQRAK 91

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------------ILIADKTITLVITGM 124
            +  QY +             R+ +Y+                            +    
Sbjct: 92  AESSQYQDMYAIPVSANVLSDRVAQYVHAYTMYSGARPFGSATFIASYNTFDGYELFMIE 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
               +        G G +   S          + +E
Sbjct: 152 PSGNKYAYHACTHGKGRAVCKSEFERRNFKDLTCQE 187


>gi|67465041|ref|XP_648707.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56464951|gb|EAL43321.1| proteasome alpha subunit, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 245

 Score = 41.5 bits (96), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 42/151 (27%), Gaps = 14/151 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+    ++   + + S+ +       RK++++ +      FAG +ADA  L+ +   +
Sbjct: 33  VGVKGKDCIIFGVEKK-SIAKLQDPRTVRKIQQIDQHIY-TTFAGLTADARVLINKARLE 90

Query: 79  LEQYPNQLLRSS----VELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGD 126
            + Y   +  +     V  A      KY +   +                   +      
Sbjct: 91  AQNYRMSMEDAPTVEYVTKAVANYQQKYTQQGGSRPFGISTLIGGFDPDGTPRLYQTDPA 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS 157
               E     +G                   
Sbjct: 151 GTWTEWKAHVVGRNSKTVDEYLVKGYEDNME 181


>gi|154345458|ref|XP_001568666.1| proteasome beta 2 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066008|emb|CAM43792.1| putative proteasome beta 2 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 206

 Score = 41.5 bits (96), Expect = 0.063,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 42/164 (25%), Gaps = 21/164 (12%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T +  R  G V++A  G  +     +     K+ +L    ++A   G +       E ++
Sbjct: 4   TAIAFRCQGYVMVAAAGLNAFYYIKITDEEDKITQLDTHQLVACI-GENGPRVNFTEYIK 62

Query: 77  KKL---EQYPNQLLRSSVELAKDWRMD--------------KYLRNLEAMILIADKT--- 116
             L       +    S    A   R                  L     + +  D     
Sbjct: 63  CNLALNRMRQHGRHSSCESTANFMRNSLASALRSREGAYQVNCLFAGYDVPVSEDDDGAA 122

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +                 G G S+  S    L     + +E
Sbjct: 123 GPQLFYMDYLGTLQAVPFGCHGYGASFVTSLLDRLWRPDLTEQE 166


>gi|289620669|emb|CBI52800.1| unnamed protein product [Sordaria macrospora]
          Length = 298

 Score = 41.5 bits (96), Expect = 0.064,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 3/142 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +T + +R    +V+A +  ++    ++K  A K       ++   ++G   D    ++
Sbjct: 33  NGSTSIGIRCKDGIVLAAEKVIT--SKLLKQGANKRIATVDRHLGIVYSGMIPDGRHFVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
           R   +   + +             RM  Y++       +    IT +I G    LE    
Sbjct: 91  RARDEARGWRDNYKTPISTKDLAGRMGGYMQAYTLYQSVRPFGITAIIGGYDSELETPVD 150

Query: 134 VMAIGSGGSYALSAARALMSTQ 155
              +GSG S             
Sbjct: 151 -GEVGSGPSVGAGGKVEGKKHG 171


>gi|167378516|ref|XP_001734828.1| proteasome subunit alpha type-7 [Entamoeba dispar SAW760]
 gi|167540168|ref|XP_001741590.1| proteasome subunit alpha type-7 [Entamoeba dispar SAW760]
 gi|165893840|gb|EDR21965.1| proteasome subunit alpha type-7, putative [Entamoeba dispar SAW760]
 gi|165903479|gb|EDR29009.1| proteasome subunit alpha type-7, putative [Entamoeba dispar SAW760]
          Length = 245

 Score = 41.1 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 42/151 (27%), Gaps = 14/151 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+    ++   + + S+ +       RK++++ +      FAG +ADA  L+ +   +
Sbjct: 33  VGVKGKDCIIFGVEKK-SIAKLQDPRTVRKIQQIDQHIY-TTFAGLTADARVLINKARLE 90

Query: 79  LEQYPNQLLRSS----VELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGD 126
            + Y   +  +     V  A      KY +   +                   +      
Sbjct: 91  AQNYRMSMEDAPTVEYVTKAVANYQQKYTQQGGSRPFGISTLIGGFDPDGTPRLYQTDPA 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS 157
               E     +G                   
Sbjct: 151 GTWTEWKAHVVGRNSKTVDEYLVKGYEDNME 181


>gi|221058162|ref|XP_002261589.1| proteasome subunit alpha type 2 [Plasmodium knowlesi strain H]
 gi|194247594|emb|CAQ40994.1| proteasome subunit alpha type 2, putative [Plasmodium knowlesi
           strain H]
          Length = 235

 Score = 41.1 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLERLE 76
           L +R    ++IA + + S  + + + +  K++++ +   I  AG  G          +  
Sbjct: 36  LGIRAKNGIIIATEKK-SPNELIEENSIYKIQQISEHIGIVYAGMPGDFRVLLKRARKEA 94

Query: 77  KKLEQYPNQ------LLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
            +             L++    + +++     +R     +LI   D     +        
Sbjct: 95  IRYSLQYGNEILVKELVKEIASIVQEFTQTGGVRPFGLSLLICGTDAYGYHLYQIDPSGC 154

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   IG      +S      ST    E+    A+
Sbjct: 155 YFNWLATCIGKDYQNNISFLEKRYSTDIEVEDAIHTAI 192


>gi|115749336|ref|XP_001200477.1| PREDICTED: similar to LOC496005 protein, partial
          [Strongylocentrotus purpuratus]
          Length = 62

 Score = 41.1 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 9  YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
            +  + + ++ +     V IA D +  +    +  NA+K+  +G    + G +G + D 
Sbjct: 1  SIMSYNGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYL-GLSGLATDI 59

Query: 69 FTL 71
           T+
Sbjct: 60 TTV 62


>gi|67476244|ref|XP_653725.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56470703|gb|EAL48337.1| proteasome alpha subunit, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 245

 Score = 41.1 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 42/151 (27%), Gaps = 14/151 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + V+    ++   + + S+ +       RK++++ +      FAG +ADA  L+ +   +
Sbjct: 33  VGVKGKDCIIFGVEKK-SIAKLQDPRTVRKIQQIDQHIY-TTFAGLTADARVLINKARLE 90

Query: 79  LEQYPNQLLRSS----VELAKDWRMDKYLRNLEAMILIAD--------KTITLVITGMGD 126
            + Y   +  +     V  A      KY +   +                   +      
Sbjct: 91  AQNYRMSMEDAPTVEYVTKAVANYQQKYTQQGGSRPFGISTLIGGFDPDGTPRLYQTDPA 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNS 157
               E     +G                   
Sbjct: 151 GTWTEWKAHVVGRNSKTVDEYLVKGYEDNME 181


>gi|148548591|ref|YP_001268693.1| hypothetical protein Pput_3383 [Pseudomonas putida F1]
 gi|148512649|gb|ABQ79509.1| hypothetical protein Pput_3383 [Pseudomonas putida F1]
          Length = 145

 Score = 41.1 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 59/170 (34%), Gaps = 31/170 (18%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI        V IA D Q++ G  ++  +  K             +G++ D   L++  
Sbjct: 2   TTI---AYKDGV-IAYDSQITRGDVIVYDDYEKCLTRDGVRFFC--SGATPDFPVLVDV- 54

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
                 Y        V++         + + E+++L+A    T +         P     
Sbjct: 55  ------YFGAKPAGPVDVTA------MVLDGESLMLVAIDNDTGLWKSPIMRDRP----Y 98

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
           AIGSG  +A +A          A   A KA+ +AA     T   I    +
Sbjct: 99  AIGSGTPFAFAAM------DMGAS--AEKAVEMAARRDTGTGGKIRTLRI 140


>gi|322703780|gb|EFY95384.1| proteasome component C11 [Metarhizium anisopliae ARSEF 23]
          Length = 182

 Score = 41.1 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 36/131 (27%), Gaps = 12/131 (9%)

Query: 38  GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD- 96
           G T++KA+  K R L K   +  F+G + D     E +++  + Y  +            
Sbjct: 3   GATILKADDDKTRALNKHT-LMAFSGEAGDTVQFAEYIQRNAQLYSMRNETDLSPSGLAH 61

Query: 97  ----------WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
                          Y  NL    +        +          E    A G    Y LS
Sbjct: 62  FVRGELATSLRSRHPYNVNLLMGGVNPITGKPHLYWLDYLASLAEVPYAAHGYAQYYCLS 121

Query: 147 AARALMSTQNS 157
                     +
Sbjct: 122 ILDKHHHPDIT 132


>gi|322696165|gb|EFY87961.1| putative proteasome subunit beta type-2 [Metarhizium acridum CQMa
           102]
          Length = 182

 Score = 41.1 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 36/131 (27%), Gaps = 12/131 (9%)

Query: 38  GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKD- 96
           G T++KA+  K R L K   +  F+G + D     E +++  + Y  +            
Sbjct: 3   GATILKADDDKTRALNKHT-LMAFSGEAGDTVQFAEYIQRNAQLYSMRNETDLSPSGLAH 61

Query: 97  ----------WRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALS 146
                          Y  NL    +        +          E    A G    Y LS
Sbjct: 62  FVRGELATSLRSRHPYNVNLLMGGVNPITGKPHLYWLDYLASLAEVPYAAHGYAQYYCLS 121

Query: 147 AARALMSTQNS 157
                     +
Sbjct: 122 ILDKHHHPDIT 132


>gi|86769244|gb|ABD15170.1| large multifunctional protease 2 [Sus scrofa]
          Length = 90

 Score = 41.1 bits (95), Expect = 0.067,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 2/67 (2%)

Query: 97  WRMDKYLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
               KY  +L A +++A  D+     + G    +         GSG +Y      A    
Sbjct: 18  NISYKYREDLSAHLMVAGWDQREGGQVYGTMGGMLIRQPFAIGGSGSTYIYGYVDAAYKP 77

Query: 155 QNSAEEI 161
             S EE 
Sbjct: 78  GMSPEEC 84


>gi|66358144|ref|XP_626250.1| proteasome subunit beta7; NTN hydrolase fold [Cryptosporidium
           parvum Iowa II]
 gi|46227073|gb|EAK88023.1| proteasome subunit beta7; NTN hydrolase fold [Cryptosporidium
           parvum Iowa II]
          Length = 310

 Score = 41.1 bits (95), Expect = 0.068,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 60/213 (28%), Gaps = 59/213 (27%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI---------------- 57
           ++ + + ++    +++     +  G   M ++  +   +G G I                
Sbjct: 45  NSGSAVGIKYKDGIMLISSPLLCYGSMKMNSDISRFHVIGSGMIDLYDERQKLKSKDEDM 104

Query: 58  -------------------------------IAGFAGSSADAFTLLERLEKKL-EQYPNQ 85
                                          +    G  +D   ++ER+E+K  E +   
Sbjct: 105 SSVNTDKRPLVRKLTEVDEDAKVRFYEGKLSVIVSTGEFSDFQNIIERVEEKAAEDFFEG 164

Query: 86  LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------ITGMGDVLEPENGVMAI 137
             +S+ E +       Y R  +   L+ D  +  +         +        +   +A 
Sbjct: 165 NFKSAKEYSGYISAVHYQRRNKMDPLLNDIIVAGLRKDGSKEIYSVDPLGTRFDEDFIAS 224

Query: 138 GSGGSYALSAARALMSTQNS---AEEIARKAMS 167
           G     A++  R       S   A+ I    M 
Sbjct: 225 GMAEYLAITLLRDKYKPDMSFDEAKLILEDCMK 257


>gi|290998333|ref|XP_002681735.1| 20S proteosome alpha subunit [Naegleria gruberi]
 gi|284095360|gb|EFC48991.1| 20S proteosome alpha subunit [Naegleria gruberi]
          Length = 219

 Score = 41.1 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 60/182 (32%), Gaps = 18/182 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++    VV+A   +    +    +  +K+ ++     IA  AG +AD   L + 
Sbjct: 32  GSAAVGLKSKDFVVLATLKRAPHAEL--SSYQKKLFKIDDHIGIA-IAGLAADGRVLSKY 88

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMIL-----IADKTITLVITG 123
           +  +   +         + R + ++A   +      +     +       D+T   +   
Sbjct: 89  MRNECMSHQYVFETPVPVQRLASKIADKSQKSTQSSSGRPFGVGLLVGGYDETGAHLYQT 148

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST-QNSAEEIARKAMSIAADICVYTNHNIVL 182
                      +AIG+    A +       T  N  +++   A+         T  N+ L
Sbjct: 149 CPSGNLYSYKAIAIGARSQSAKTYFEKHYDTFTNDWKDLIVHALKALKGT---TGDNVEL 205

Query: 183 ET 184
            T
Sbjct: 206 TT 207


>gi|310795846|gb|EFQ31307.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
          Length = 293

 Score = 41.1 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 41/144 (28%), Gaps = 7/144 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++       AN R         ++  ++G   D    ++
Sbjct: 33  NGGTSIGIRCKEGVVLAVEKVIASKLWKPNANKRIATIDRHLGVV--YSGMVPDGRHFVD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--ITGMGDVLEPE 131
           R  ++   +                  +    L+A  L +      +  I G  D     
Sbjct: 91  RAREEARGWRETFKTPIST---ADLASRMGGYLQAYTLYSSVRPFGITAIVGGFDPSTES 147

Query: 132 NGVMAIGSGGSYALSAARALMSTQ 155
                +GSG               
Sbjct: 148 PVDGEVGSGPKVGAGGKDTSKKHG 171


>gi|296190133|ref|XP_002743066.1| PREDICTED: proteasome subunit alpha type-3-like [Callithrix
           jacchus]
          Length = 247

 Score = 41.1 bits (95), Expect = 0.071,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 43/156 (27%), Gaps = 1/156 (0%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +++T + +R    VV   +  V        +N +        G  +AG    +     + 
Sbjct: 33  NSSTAIGIRCKDAVVFGVEILVLSKLYEEGSNKQLFNVDRHVGMAVAGLLADARSLADIA 92

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPEN 132
                         +  +  +A      + L     +   +      +       +    
Sbjct: 93  REEASNFRSNFGYNIPLADRVAMYAHAVRPLGCSFMLGSCSVNDGVQLCMTDPSGVSYSY 152

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
              AIG     A +    L   + +  +I ++   I
Sbjct: 153 WGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKI 188


>gi|71405953|ref|XP_805553.1| proteasome alpha 7 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70869007|gb|EAN83702.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi]
          Length = 237

 Score = 41.1 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 49/162 (30%), Gaps = 13/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +T +       VV+A +  ++  + + + +  ++  + +   +    G   D   ++ 
Sbjct: 31  NGSTAVAACCTDGVVVAVEKILTS-RMLEERSNDRIHAVDRQAGVC-ICGMLPDGRAVVS 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   + E   +             R+ +++                +I         +  
Sbjct: 89  RARAEAENSRDVFATPIPGSVLASRIGEFMHVYTTHYAYRPFGCSVIIASYADDGPQLFV 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                       +A+G G + A +    L     + +E   K
Sbjct: 149 SDPSGTVAGYYGIALGKGKTVAKTELEKLNFKSLTCDEAVVK 190


>gi|24586400|ref|NP_724614.1| proteasome alpha1 subunit, isoform A [Drosophila melanogaster]
 gi|24586402|ref|NP_524837.2| proteasome alpha1 subunit, isoform B [Drosophila melanogaster]
 gi|24586406|ref|NP_724616.1| CG30382, isoform A [Drosophila melanogaster]
 gi|281360341|ref|NP_001163078.1| CG30382, isoform B [Drosophila melanogaster]
 gi|12643941|sp|Q9XZJ4|PSA6_DROME RecName: Full=Proteasome subunit alpha type-6; AltName: Full=20S
           proteasome subunit alpha-1
 gi|7304146|gb|AAF59183.1| proteasome alpha1 subunit, isoform A [Drosophila melanogaster]
 gi|7304147|gb|AAF59184.1| proteasome alpha1 subunit, isoform B [Drosophila melanogaster]
 gi|21428692|gb|AAM50006.1| SD02332p [Drosophila melanogaster]
 gi|21627732|gb|AAM68869.1| CG30382, isoform A [Drosophila melanogaster]
 gi|220944426|gb|ACL84756.1| CG30382-PA [synthetic construct]
 gi|220954302|gb|ACL89694.1| CG30382-PA [synthetic construct]
 gi|272432380|gb|ACZ94357.1| CG30382, isoform B [Drosophila melanogaster]
          Length = 244

 Score = 41.1 bits (95), Expect = 0.072,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 40/160 (25%), Gaps = 10/160 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V +      R     G  + G    S          
Sbjct: 38  TTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
                    Y   +      +A   ++      +  +          ++    V      
Sbjct: 98  AANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    ++G+    A S          S E+  + A+
Sbjct: 158 GYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAI 197


>gi|322490610|emb|CBZ25871.1| putative proteasome beta 2 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 206

 Score = 41.1 bits (95), Expect = 0.073,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 37/163 (22%), Gaps = 19/163 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T +  R    V++A  G  +     +     K+ +L    ++A    +            
Sbjct: 4   TAIAFRCKDYVMVAAAGLNAFYYIKITDAEDKITQLDTHQLVACTGENGPRVNFTEYVKC 63

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDK----------------YLRNLEAMILIADKT---I 117
             +     Q  R S   +    M                   L     M +  D      
Sbjct: 64  NLMLNRMRQHGRHSSCDSTANFMRNCLASAIRSREGAYQVSCLFAGYDMPVSEDDDGAVG 123

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +                 G G  +  +    L     + +E
Sbjct: 124 PQLFYLDYLGTLQAVPYGCHGYGACFVTALLDCLWRPDLTQQE 166


>gi|313238191|emb|CBY13285.1| unnamed protein product [Oikopleura dioica]
          Length = 162

 Score = 41.1 bits (95), Expect = 0.075,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +      V+A + +++    ++  +  K+  + K  +    +G  ADA T+++R
Sbjct: 34  GSTAIGIHTKEGCVLAVEKRITS-PLIVPTSIEKIFEVDKH-VGCAMSGLIADARTMIDR 91

Query: 75  LEKKLEQYP 83
              + + + 
Sbjct: 92  ARVEAQNHW 100


>gi|226292478|gb|EEH47898.1| proteasome component C1 [Paracoccidioides brasiliensis Pb18]
          Length = 303

 Score = 41.1 bits (95), Expect = 0.075,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 9/136 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + K   I   +G   D    ++
Sbjct: 40  NGGTSIGIRCKDGVVLAVEKIISSKLLKPGAN-KRISTVDKHIGIV-SSGLIPDGRHFVD 97

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT--GMGDVLEPE 131
           R   +   + N             R+  Y++                +T    G   E E
Sbjct: 98  RARDEAYSWRNTYKGPISTSVLASRLGSYVQAYTLY----SSVRPFCVTSIIGGWDSEVE 153

Query: 132 NGVMA-IGSGGSYALS 146
             V   +GSG      
Sbjct: 154 LPVDGQVGSGPKSGAG 169


>gi|194664026|ref|XP_001788024.1| PREDICTED: proteasome alpha 2 subunit [Bos taurus]
 gi|297470862|ref|XP_002684819.1| PREDICTED: proteasome alpha 2 subunit-like [Bos taurus]
 gi|296491497|gb|DAA33550.1| proteasome alpha 2 subunit-like [Bos taurus]
          Length = 234

 Score = 41.1 bits (95), Expect = 0.076,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VV+A + +    ++++    +  KV  + K   +   G             +
Sbjct: 36  VGIKAANGVVLATEKK---QKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L ++            QL++    + +++     +R     +LI   ++    +      
Sbjct: 93  LAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSCGVRPFGVSLLICGWNEGRPYLFQSDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G       +      +     E+    A+
Sbjct: 153 GAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|148684146|gb|EDL16093.1| mCG13231, isoform CRA_c [Mus musculus]
          Length = 75

 Score = 41.1 bits (95), Expect = 0.078,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 3/60 (5%)

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKVG 188
           +  +  G+          +L       E +     +AM  A D    +   +++  ++  
Sbjct: 4   DDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHVIEKD 63


>gi|71023139|ref|XP_761799.1| hypothetical protein UM05652.1 [Ustilago maydis 521]
 gi|46100822|gb|EAK86055.1| hypothetical protein UM05652.1 [Ustilago maydis 521]
          Length = 252

 Score = 41.1 bits (95), Expect = 0.078,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 48/164 (29%), Gaps = 14/164 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    +VIA + +      V  +   ++  +     +  ++G   D   L+  
Sbjct: 36  GATSLGIKASNAIVIATEKRAPS-PLVDDSALERISIICPNIGMV-YSGMGPDFRVLVSA 93

Query: 75  LEKKLEQYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
             K  + Y            L++    L +       +R     +L+A         +  
Sbjct: 94  ARKAAQTYWKTFGEYPPVRVLVQEIATLMQQATQRGGVRPFGVSLLVAGFDSARGPSLYQ 153

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        AIG     A +      +   S E+    A+
Sbjct: 154 VDPSGSYFMWKASAIGKNMQNAKTFLEKRYNNDISQEDAIHTAL 197


>gi|195575239|ref|XP_002105587.1| GD16600 [Drosophila simulans]
 gi|194201514|gb|EDX15090.1| GD16600 [Drosophila simulans]
          Length = 257

 Score = 41.1 bits (95), Expect = 0.079,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 62/192 (32%), Gaps = 23/192 (11%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTLLER 74
            T + +     V++A +  V     +M  +    R      ++     G+ AD   L+ +
Sbjct: 32  GTCVGILAKNGVLLATERSV---DKLMDTSIPVPRISSLNEDMACCATGNMADGNVLVAQ 88

Query: 75  LEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L    +QY           QL+RS  ++ + +      R      L           +  
Sbjct: 89  LRLSSQQYLVNFGEKIPCEQLVRSLCDIKQAYTQYGGKRPFGVSFLYMGWDRRFGFQLYQ 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-------NSAEEIARKAMSIAADICVY 175
                         IG     AL   +  + ++         A+++A K M +  D    
Sbjct: 149 SDPSGNYSGWKATCIGRKSGAALEMLQNELFSKGYVCPSLEEAKDVAIKVMGMTLDRGSL 208

Query: 176 TNHNIVLETLKV 187
           T  N+ + +++ 
Sbjct: 209 TPANLEIASIQR 220


>gi|123429661|ref|XP_001307739.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121889385|gb|EAX94809.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 232

 Score = 41.1 bits (95), Expect = 0.079,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 45/164 (27%), Gaps = 11/164 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + V+     VIA + + S    V K    KV+++     I     ++     L   
Sbjct: 30  GGQCVGVKAKNGAVIACESKPSS-PLVEKVTNLKVQKINDNVGIVYSGVNTDFHVILKSL 88

Query: 75  ----LEKKLEQYPNQLLRSSVELAKDWRMD----KYLRNLEAMILIADKTI--TLVITGM 124
               ++  L        R  V+ A            +R     +LI         +    
Sbjct: 89  RKASIKYSLRLGVEMPTREVVKHAAHKMQYYTQIGGVRPFGVSLLIIGWEELGPTLWQVD 148

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                      A+G     + +      S   S ++    A+S 
Sbjct: 149 PSGTFWAWKATALGKRSDGSRTFLERRYSEDQSVDDAIHTAIST 192


>gi|115936334|ref|XP_001176768.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 266

 Score = 41.1 bits (95), Expect = 0.082,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 44/154 (28%), Gaps = 15/154 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  L+ R   +
Sbjct: 6   VGVRGKDLVVLGVEKK-SVAKLQEERTVRKICVLDDH-VCMAFAGLTADARILINRARIE 63

Query: 79  LEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
            + +   +            +A+  +            L              +      
Sbjct: 64  CQSHRLTVEDPVTVEYITRFMAQLKQRYTQSNGRRPFGLSTLIVGFDYDGSPRLYQTDPA 123

Query: 127 VLEPENGVMAIGSG-GSYALSAARALMSTQNSAE 159
                       +G   + LS          S  
Sbjct: 124 GTYHSWKRYTQSNGRRPFGLSTLIVGFDYDGSPR 157


>gi|212722238|ref|NP_001132162.1| hypothetical protein LOC100193583 [Zea mays]
 gi|194693614|gb|ACF80891.1| unknown [Zea mays]
          Length = 249

 Score = 41.1 bits (95), Expect = 0.083,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 53/192 (27%), Gaps = 22/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGVDTVVLGVEKKSTPKLQ-DSRSVRKIASLDTHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +               L + +     +R      LI           +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTQKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVE----SGG 202

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 203 KNIEIAVMTHED 214


>gi|71652599|ref|XP_814952.1| proteasome alpha 7 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70879971|gb|EAN93101.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi]
          Length = 237

 Score = 40.7 bits (94), Expect = 0.085,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 49/162 (30%), Gaps = 13/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +T +       VV+A +  ++  + + + +  ++  + +   +    G   D   ++ 
Sbjct: 31  NGSTAVAACCTDGVVVAVEKILTS-RMLEERSNDRIHAVDRQAGVC-ICGMLPDGRAVVS 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   + E   +             R+ +++                +I         +  
Sbjct: 89  RARAEAENSRDVFATPIPGSVLASRIGEFMHVYTTHYAYRPFGCSVIIASYADDGPQLFV 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                       +A+G G + A +    L     + +E   K
Sbjct: 149 SDPSGTVAGYYGIALGKGKTVAKTELEKLNFKSLTCDEAVVK 190


>gi|9623022|gb|AAF90008.1|AF232231_1 20S proteasome alpha 5 subunit [Trichomonas vaginalis]
          Length = 110

 Score = 40.7 bits (94), Expect = 0.086,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           ++ + +     V+ A + ++S    +   +  KV  +     +   AG +AD  T++E 
Sbjct: 7  GSSAVAILCPEGVIFAVEKRLSSQLLIAS-SVEKVYAIDDHVGVV-MAGLAADGRTMVEH 64

Query: 75 LEKKLEQYPNQLLRSSVELA 94
          +  + + +           A
Sbjct: 65 MRVEAQNHRFSFDEPIGIKA 84


>gi|123485121|ref|XP_001324423.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121907305|gb|EAY12200.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 238

 Score = 40.7 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 14/160 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + TT+L ++  G++V A + +      + K ++     L   +I+  F G  ADA  L+E
Sbjct: 28  NGTTVLAIQAPGIIVAAIEKR--DMMKLQKQDSSNNMCLLDKHILCAFTGLPADARVLVE 85

Query: 74  RLEKKLEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIADK------TITLVI 121
           + + + + Y      +      +  +A           +    +              + 
Sbjct: 86  KAQFEAQSYRLTFEDAIPIENIARYIATVQLTYTQSGGVRPFGVTTLICGFDPLDKPHIY 145

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
             +   +  E     IG  G               S +++
Sbjct: 146 ETLPSGILSEWKARGIGRFGHPVQEYIEKYYVDNLSEDDV 185


>gi|62318933|dbj|BAD94023.1| proteasome component C5 [Arabidopsis thaliana]
          Length = 56

 Score = 40.7 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 6/35 (17%), Positives = 16/35 (45%)

Query: 154 TQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           ++  A ++ +   + A +  +YT   + +  LK  
Sbjct: 10  SEAEAVDLVKTVFASATERDIYTGDKLEIMILKAD 44


>gi|4929308|gb|AAD33944.1|AF144749_1 20S proteasome subunit alpha1 [Drosophila melanogaster]
          Length = 244

 Score = 40.7 bits (94), Expect = 0.089,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 44/160 (27%), Gaps = 10/160 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V +      R     G  + G    S          
Sbjct: 38  TTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKGRYE 97

Query: 76  EKKLEQYPNQLL------RSSVELAKDWRMDKYLRN--LEAMILIADKTI-TLVITGMGD 126
                      +      R   ++ + +  +  +R      +++  D  I   V      
Sbjct: 98  AANFRYKYGYEMPVDVLCRRIADITQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    ++G+    A S          S E+  + A+
Sbjct: 158 GYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAI 197


>gi|239789506|dbj|BAH71374.1| ACYPI009032 [Acyrthosiphon pisum]
          Length = 132

 Score = 40.7 bits (94), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 2/87 (2%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + +     VV+  + +++    +      K+  + K    A  +G  AD+ T++ER
Sbjct: 34  GSTAIGICTPEGVVLGVEKRITSPLMITSK-IEKIFEVDKHIGCA-VSGLIADSRTMVER 91

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK 101
              + + +           +    +  
Sbjct: 92  ARAESQNHWFTYNEQMSVESVAQAVSN 118


>gi|195064491|ref|XP_001996575.1| GH21877 [Drosophila grimshawi]
 gi|193895395|gb|EDV94261.1| GH21877 [Drosophila grimshawi]
          Length = 223

 Score = 40.7 bits (94), Expect = 0.090,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 28/191 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            TIL +      VIA D         M ++   +  + + ++  G  GS  D  ++   +
Sbjct: 33  GTILAIGGVDFAVIASD-------YCMTSDLDNLFPMTRQSV-MGCIGSWVDVASMNALI 84

Query: 76  EK--KLEQYPNQLLRSSVELA---KDWRMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           ++  ++ +  N+    +  LA         + L       ++A   +     V       
Sbjct: 85  KRRGQMRELDNRSKLPTEILASIISSTINSRRLFPWRTSTILAGLDVMGKGAVYQYNDVG 144

Query: 128 LEPENGVMAIGSGGSYALSAA-----RALMSTQNS---AEEIARKAMSIAADICVYT--N 177
                    +GS  +           +       +   A ++ R     A+   V+T   
Sbjct: 145 QRGRFLYSVLGSARNIMWPQLNHVIGKPQHYPLLTKERAFDLVRDCFMDASR--VHTVIG 202

Query: 178 HNIVLETLKVG 188
              +++ +   
Sbjct: 203 DTALIKIITKD 213


>gi|12833183|dbj|BAB22424.1| unnamed protein product [Mus musculus]
          Length = 255

 Score = 40.7 bits (94), Expect = 0.091,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       AIG     A +    L   + +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCAIGKRRQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|67591750|ref|XP_665592.1| beta tubulin [Cryptosporidium hominis TU502]
 gi|54656351|gb|EAL35361.1| beta tubulin [Cryptosporidium hominis]
          Length = 279

 Score = 40.7 bits (94), Expect = 0.092,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 60/213 (28%), Gaps = 59/213 (27%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI---------------- 57
           ++ + + ++    +++     +  G   M ++  +   +G G I                
Sbjct: 14  NSGSAVGIKYKDGIMLISSPLLCYGSMKMNSDISRFHVIGSGMIDLYDERQKLKSKDEDM 73

Query: 58  -------------------------------IAGFAGSSADAFTLLERLEKKL-EQYPNQ 85
                                          +    G  +D   ++ER+E+K  E +   
Sbjct: 74  SSVNTDKRPLVRKLTEVDEDAKVRFYEGKLSVIVSTGEFSDFQNIIERVEEKAAEDFFEG 133

Query: 86  LLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV--------ITGMGDVLEPENGVMAI 137
             +S+ E +       Y R  +   L+ D  +  +         +        +   +A 
Sbjct: 134 NFKSAKEYSGYISAVHYQRRNKMDPLLNDIIVAGLRKDGSKEIYSVDPLGTRFDEDFIAS 193

Query: 138 GSGGSYALSAARALMSTQNS---AEEIARKAMS 167
           G     A++  R       S   A+ I    M 
Sbjct: 194 GMAEYLAITLLRDKYKPDMSFDEAKLILEDCMK 226


>gi|331216033|ref|XP_003320696.1| proteasome subunit alpha [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309299686|gb|EFP76277.1| proteasome subunit alpha [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 303

 Score = 40.7 bits (94), Expect = 0.092,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 59/165 (35%), Gaps = 15/165 (9%)

Query: 19  LTVRKDG---VVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           + ++K      +V+A + +V+      +    +   L  GN+++G AG +ADA +L+   
Sbjct: 79  VAIKKGKRRTGIVLAAEKKVTSKLLEKEEGTGEKIFLINGNLLSGVAGYTADANSLVNYS 138

Query: 76  EKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITG 123
               + +           Q+++   +L + +      R      LIA         + + 
Sbjct: 139 RNVAQGHLMSYDTDMPVEQMVKRLCDLKQGYTQFGGQRPFGVSFLIAGYDPHHQFQLYST 198

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                        IG+G S A S  R         +E    A+ +
Sbjct: 199 DPSGNYAAWKATCIGNGNSTATSLLRQDYKDSMDLDEAIVLALKV 243


>gi|262401167|gb|ACY66486.1| 20S proteasome alpha subunit [Scylla paramamosain]
          Length = 103

 Score = 40.7 bits (94), Expect = 0.092,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +T + ++    VV+A + +++    +      K+ ++ K    A  +G  AD+ TL++ 
Sbjct: 34  GSTAIGIQTGEGVVLAVEKRITSPLMIPS-TIEKIVQIDKHIGCA-VSGLVADSRTLVDH 91

Query: 75  LEKKLEQYP 83
              +   + 
Sbjct: 92  ARVECANHW 100


>gi|182682902|ref|YP_001837026.1| hypothetical protein AGC_0103 [Enterobacteria phage EPS7]
 gi|182630614|gb|ACB97546.1| Hypothetical protein AGC_0103 [Enterobacteria phage EPS7]
          Length = 192

 Score = 40.7 bits (94), Expect = 0.093,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 48/166 (28%), Gaps = 24/166 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQT-VMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           T I+  +    V +AGD   S G T ++  N +  +      +  G+  S      L   
Sbjct: 2   TAIVAFKYKDKVYLAGDRMGSNGYTKLLVKNPKVFKISDD--LYFGYTSSFYMGQLLEHS 59

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD-------------KYLRNLEAMILIADKTITLVI 121
                        +           D             KY        ++  K    + 
Sbjct: 60  FTVPPRLADISDDKYLYTEIVPKLRDMFNQKDFGEKKNEKYAEPNLGQFIMLYKGRIFIF 119

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALM------STQNSAEEI 161
                +LE E     +G GG   LS+ R  +      +T    ++I
Sbjct: 120 QSNASILEVE--YAGVGCGGEDVLSSIRTGLAIADCRATDLDVDDI 163


>gi|1907268|emb|CAA62960.1| proteasome subunit C9-like protein [Sus scrofa]
          Length = 226

 Score = 40.7 bits (94), Expect = 0.093,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 56/185 (30%), Gaps = 15/185 (8%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLLERLEK 77
            +  +  V++A + +           + K+ +L +      AG    +      L  + +
Sbjct: 1   GILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQ 60

Query: 78  KLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGDVL 128
           +            QL+ +  ++ + +      R     +L           +        
Sbjct: 61  RYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGN 120

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQ----NSAEEIARKAMSIAADICVYTNHNIVLET 184
                   IG+  + A+S  +           SA  +A K ++   D+   +   + + T
Sbjct: 121 YGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIAT 180

Query: 185 LKVGD 189
           L   +
Sbjct: 181 LTREN 185


>gi|313224676|emb|CBY20467.1| unnamed protein product [Oikopleura dioica]
          Length = 233

 Score = 40.7 bits (94), Expect = 0.095,   Method: Composition-based stats.
 Identities = 14/158 (8%), Positives = 39/158 (24%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSL--GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VVIA + +                +     G + +G                
Sbjct: 35  VGIKAKDGVVIATEKKHKSALQDETSYHKVETICP-HIGVVYSGMGPDYRVIVKHARHEA 93

Query: 77  KKLEQYPNQLLRS---SVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVL 128
              +Q   + + +      +A+ ++       +    +       D    ++        
Sbjct: 94  AAYKQRYGEDIPTEQLVQTVAEIFQNYTQQGGVRVFGISLLIIGFDSKGPMLYQCDPSGC 153

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  A+G     A S      +     ++    A+
Sbjct: 154 FYPWKATALGKNYVNARSFLERRYNEDLELDDAVHTAI 191


>gi|225680783|gb|EEH19067.1| proteasome subunit alpha type-3 [Paracoccidioides brasiliensis
           Pb03]
          Length = 274

 Score = 40.7 bits (94), Expect = 0.099,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 9/136 (6%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + K   I   +G   D    ++
Sbjct: 11  NGGTSIGIRCKDGVVLAVEKIISSKLLKPGAN-KRISTVDKHIGIV-SSGLIPDGRHFVD 68

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT--GMGDVLEPE 131
           R   +   + N             R+  Y++                +T    G   E E
Sbjct: 69  RARDEAYSWRNTYKGPISTSVLASRLGSYVQAYTLY----SSVRPFCVTSIIGGWDSEVE 124

Query: 132 NGVMA-IGSGGSYALS 146
             V   +GSG      
Sbjct: 125 LPVDGQVGSGPKSGAG 140


>gi|221119622|ref|XP_002166196.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 235

 Score = 40.7 bits (94), Expect = 0.099,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 47/164 (28%), Gaps = 15/164 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFT 70
               + ++    VVIA + +    ++++       K+  +     I   G         +
Sbjct: 32  GGPSVGIKAVNGVVIAAEKK---QKSILFDEKTISKIEMVTNHIGIVYSGMGPDFRLLVS 88

Query: 71  LLERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVIT 122
              R+    +          QL++    + +++     +R     +LI   D  +  +  
Sbjct: 89  EARRISVNYKLQYGEPIPTTQLVQKVANVMQEYTQSGGVRPFGVSLLICGWDDDVPSLYQ 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                        A+G       +      +     E+    A+
Sbjct: 149 CDPSGAYFGWKATAVGKNFVNGKTFLEKRYNEMMELEDAVHTAI 192


>gi|195474510|ref|XP_002089534.1| Prosalpha6 [Drosophila yakuba]
 gi|194175635|gb|EDW89246.1| Prosalpha6 [Drosophila yakuba]
          Length = 244

 Score = 40.7 bits (94), Expect = 0.100,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 41/161 (25%), Gaps = 10/161 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V +      R     G  + G    S          
Sbjct: 38  TTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRMADSRSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
                    Y   +      +A   ++      +  +          ++    V      
Sbjct: 98  AANFRYKYGYDMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLLAYDNEIGPSVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                    ++G+    A S          S E+  + A++
Sbjct: 158 GYFSGFKACSVGAKTLEANSYLEKKYKNNLSEEKAIQLAIT 198


>gi|149054059|gb|EDM05876.1| rCG33987, isoform CRA_c [Rattus norvegicus]
          Length = 75

 Score = 40.7 bits (94), Expect = 0.100,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 3/60 (5%)

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNHNIVLETLKVG 188
           +  +  G+          +L       E +     +AM  A D    +   +++  ++  
Sbjct: 4   DDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMGVIVHIIEKD 63


>gi|146103498|ref|XP_001469574.1| proteasome beta 2 subunit [Leishmania infantum]
 gi|134073944|emb|CAM72684.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
 gi|322503388|emb|CBZ38472.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 206

 Score = 40.7 bits (94), Expect = 0.100,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 40/164 (24%), Gaps = 21/164 (12%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T +  R    V++A  G  +     +     K+ +L    +IA   G +       E ++
Sbjct: 4   TAIAFRCQDYVMVAAAGLNAFYYIKITDAEDKITQLDTHQLIAC-TGENGPRVNFTEYVK 62

Query: 77  KKL---EQYPNQLLRSSVELAKDWRMD--------------KYLRNLEAMILIADKT--- 116
             L       +    S    A   R                  L     M +  D     
Sbjct: 63  CNLMLNRMRQHGRHSSCDSTANFMRNCLASAIRSREGAYQVNCLFAGYDMPVSEDDDGAV 122

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +                 G G  +  +    L     + +E
Sbjct: 123 GPQLFYLDYLGTLQAVPYGCHGYGACFVTALLDCLWRPDLTQQE 166


>gi|196013139|ref|XP_002116431.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190581022|gb|EDV21101.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 260

 Score = 40.7 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/189 (10%), Positives = 57/189 (30%), Gaps = 14/189 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTLL 72
           A T   +  +  +V+  + +++         + K+ ++ +      AG    +      L
Sbjct: 31  AGTCFGILAEDGIVLGAERKITNKLLDEIPFSDKIYKINENMACSVAGITSDANVLINEL 90

Query: 73  ERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITG 123
             + ++            QL+    ++ + +      R     +L           +   
Sbjct: 91  RLIAQRYLLNYQEPIPCEQLVSHLCDIKQAYTQFGGKRPFGVSLLYIGWDRHYGFQLYHS 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQ---NSAEEIARKAMSIAADICVYTNHNI 180
                        IG+  S A++  +         + A  ++ K +    D+   +   +
Sbjct: 151 DPSGNYGGWKANCIGNNNSAAMAILKQEYKEDIKIDDALSLSMKVLHKTLDVSKLSPEKV 210

Query: 181 VLETLKVGD 189
            + TL   +
Sbjct: 211 EMATLTRKN 219


>gi|313240674|emb|CBY32995.1| unnamed protein product [Oikopleura dioica]
          Length = 233

 Score = 40.7 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/158 (8%), Positives = 39/158 (24%), Gaps = 11/158 (6%)

Query: 19  LTVRKDGVVVIAGDGQVSL--GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VVIA + +                +     G + +G                
Sbjct: 35  VGIKAKDGVVIATEKKHKSALQDETSYHKVETICP-HIGVVYSGMGPDYRVIVKHARHEA 93

Query: 77  KKLEQYPNQLLRS---SVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITGMGDVL 128
              +Q   + + +      +A+ ++       +    +       D    ++        
Sbjct: 94  AAYKQRYGEDIPTEQLVQTVAEIFQNYTQQGGVRVFGISLLIIGFDSKGPMLYQCDPSGC 153

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  A+G     A S      +     ++    A+
Sbjct: 154 FYPWKATALGKNYVNARSFLERRYNEDLELDDAVHTAI 191


>gi|2570505|gb|AAB82138.1| proteasome component [Oryza sativa Indica Group]
          Length = 261

 Score = 40.7 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 66/192 (34%), Gaps = 21/192 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L ++    V +A + ++     V + + +K++ L     +  ++G   D   L+ +
Sbjct: 32  GQTSLGIKAANGVFVATEKKLPS-ILVDETSVQKIQSLTPNVGVV-YSGMGPDFRVLVRK 89

Query: 75  ----LEKKLEQYPN-----QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
                ++    Y       QL+R +  + +++     +R     +LIA  D     +   
Sbjct: 90  SPKQAQQCCRLYKETMPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQV 149

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----AADICVYTNH 178
                       A+G   S A +      +     ++     + I        I   + +
Sbjct: 150 DPSGSYFSWKASAMGKNVSNAKTFLEKRHTEDMELDDAIHTGILILKEGYEGQI---SAN 206

Query: 179 NIVLETLKVGDE 190
           NI +  ++   E
Sbjct: 207 NIEIGIIRSDRE 218


>gi|328866215|gb|EGG14600.1| proteasome subunit alpha type 2 [Dictyostelium fasciculatum]
          Length = 162

 Score = 40.7 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 14/135 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             + + ++    VVI  + +  L   V  ++ +K+  + +   +  +AG   D+  L+++
Sbjct: 31  GGSAIGIKAKNGVVIVTEKK--LHSLVDGSSVQKISTITENIGLV-YAGMGPDSRVLIKK 87

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITG 123
             K+ E+Y           QL+R    + +++     +R     +L+A  D     +   
Sbjct: 88  ARKEAEKYFKLYREKIPVLQLVREMASIMQEYTQSGGVRPFGVSLLVAGFDDKGPQLYQV 147

Query: 124 MGDVLEPENGVMAIG 138
                       AIG
Sbjct: 148 DPSGSYFAWKATAIG 162


>gi|296421533|ref|XP_002840319.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636534|emb|CAZ84510.1| unnamed protein product [Tuber melanosporum]
          Length = 256

 Score = 40.7 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 51/173 (29%), Gaps = 23/173 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE- 73
             T L ++    VV+A + + S    +  ++  K+  +     +              + 
Sbjct: 31  GVTSLGIKATNGVVLATEKKSST-PLMNSSSLEKISCITPNIGMIYSGMGPDYRVLTDKA 89

Query: 74  ------RLEKKLEQYP--NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI-------- 117
                   ++   +YP    L++   ++ ++      +R     +L+A            
Sbjct: 90  RKVSHSDYKRIYNEYPPTRILVQDVAKVMQEATQSGGVRPFGVSLLVAGWDDKPAGTGKG 149

Query: 118 -TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
              +               AIG   + A +      +     E+    A+ IA
Sbjct: 150 GPALYQVDPSGSYFPWKATAIGKSATSAKTFLEKRYAEGLELED----AIHIA 198


>gi|326933067|ref|XP_003212631.1| PREDICTED: proteasome subunit beta type-2-like [Meleagris
           gallopavo]
          Length = 240

 Score = 40.7 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 40/138 (28%), Gaps = 14/138 (10%)

Query: 43  KANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDK- 101
           K    K+ ++ +  ++    G + D     E ++K ++ Y  +        A      + 
Sbjct: 68  KRYHDKMFKMSEKILLLC-VGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRN 126

Query: 102 ---YLRNLEAM------ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM 152
              YLR+              D     +          +    A G G    LS      
Sbjct: 127 LADYLRSRTPYHVNLLLAGYDDHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYY 186

Query: 153 STQNS---AEEIARKAMS 167
               +   A E+ +K + 
Sbjct: 187 KPGITREEAVELLKKCLE 204


>gi|194761680|ref|XP_001963056.1| GF15751 [Drosophila ananassae]
 gi|190616753|gb|EDV32277.1| GF15751 [Drosophila ananassae]
          Length = 285

 Score = 40.7 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 15/149 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT + ++   + V+    + +   +V   + RKV  +     I+  AG +ADA  L   
Sbjct: 33  GTTTVGLKNRSIAVLVALSKPTSEVSV---SQRKVIPIDDHLGIS-IAGITADARVLSRY 88

Query: 75  LEKKLEQYPNQLL------RSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +         R    L         R D+    +  ++   D+    +   
Sbjct: 89  LRSECLNYKHTYESTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDEKGPHIYQV 148

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM 152
           M      +    +IGS    A +   + +
Sbjct: 149 MPSANFYDCKAYSIGSRSQSARTYLESNL 177


>gi|3641499|gb|AAC36462.1| proteosome component [Theileria parva]
          Length = 158

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 38/148 (25%), Gaps = 11/148 (7%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLERL 75
            + V     VV+  D  +S           K+ +L       +AG    +     + +  
Sbjct: 10  TVGVLCSSGVVLVADKPISSKLLDPGKINEKLYKLDSHIFCAVAGLTADANVLINMCKLY 69

Query: 76  EKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGD 126
            ++            Q +    +L + +     LR      L       L   +      
Sbjct: 70  AQRHRYSYGEPQSIEQHIIQICDLKQSYTQFGGLRPFGVSFLFGGWDENLGFQLYHTDPS 129

Query: 127 VLEPENGVMAIGSGGSYALSAARALMST 154
                    AIG     A S  + +   
Sbjct: 130 GNYSGWKATAIGMNSQSAQSILKQVFKF 157


>gi|148704618|gb|EDL36565.1| proteasome (prosome, macropain) subunit, alpha type 3, isoform
           CRA_c [Mus musculus]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 53/165 (32%), Gaps = 14/165 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T  + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +  
Sbjct: 5   TVAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLADIA 62

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVITG 123
            ++   + +    +        R+  Y+                 +   +      +   
Sbjct: 63  REEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMI 122

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
               +       AIG     A +    L   + +  ++ ++   I
Sbjct: 123 DPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 167


>gi|226531007|ref|NP_001149085.1| proteasome subunit alpha type 1 [Zea mays]
 gi|195624592|gb|ACG34126.1| proteasome subunit alpha type 1 [Zea mays]
 gi|223974191|gb|ACN31283.1| unknown [Zea mays]
          Length = 274

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 19/168 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            +  + +R     V+A   +  S     + +  RKV R+     +A  AG +AD   L  
Sbjct: 32  GSACVGLRSSTHAVLAAVNKPASE----LSSYQRKVFRVADHAGVA-LAGLTADGRVLSR 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD-----------KYLRNLEAMILIADKTITLVIT 122
            L  +   +               ++            K    +  ++   D++   +  
Sbjct: 87  FLRNECINHSFVYEAPLPVSRLALKLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYY 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
                   E    AIGS    A +            + E++ + A+S 
Sbjct: 147 NCPSGNYFEYQAFAIGSRSQAAKTFLERRFQGYNDYTPEQLIKDALSA 194


>gi|156538136|ref|XP_001608256.1| PREDICTED: similar to proteasome 25 kDa subunit [Nasonia
           vitripennis]
          Length = 234

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/157 (10%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANAR-KVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + ++    VV+A + +         + ++ ++     G + +G             ++ +
Sbjct: 36  VGIKASNGVVLATENKHKSILYDEHSVSKVEMITKYIGMVYSGMGPDYRLLVKQARKMAQ 95

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDVLE 129
           +            QL++    L +++     +R     +LI   DK    +         
Sbjct: 96  QYYLVYKEPIPTAQLVQRVAMLMQEYTQSGGVRPFGVSLLICGWDKGKPYLFQCDPSGAY 155

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 A+G       +      S     ++    A+
Sbjct: 156 FAWKATAMGKNFINGKTFLEKRYSEDLELDDAVHTAI 192


>gi|307180286|gb|EFN68319.1| Proteasome subunit alpha type-1 [Camponotus floridanus]
          Length = 277

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++     V+    + S     + A+ +K+  + K   I+  +G +ADA  L   
Sbjct: 32  GSATVGLKNKTHAVLIALKRASSE---LSAHQKKIIPIDKHMGIS-ISGLTADARILSRY 87

Query: 75  LEKKL--EQYPNQLLRSSVEL---------AKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +    +Y +        L             R D+    +  ++   D     +   
Sbjct: 88  MRTECLNYKYAHDDTLPVSRLITSLGNKMQTCTQRYDRRPYGVGLLVGGYDDQGPHIYQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA--EEIARKAMSI 168
                  +   MAIGS    A +     +S   S   +E+ +  +  
Sbjct: 148 CPSANFFDCKAMAIGSRSQSARTYLEKHLSEFLSCDLDELVKHGLRA 194


>gi|149053555|gb|EDM05372.1| rCG63514 [Rattus norvegicus]
          Length = 228

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 6   NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 63

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 64  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 123

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       A G     A +    L   + +  ++ ++   I
Sbjct: 124 MIDPSGVSYGYWGCATGKARQAAKTEIEKLQMKEMTCCDVVKEVAKI 170


>gi|293340276|ref|XP_002724569.1| PREDICTED: proteasome subunit alpha type-3-like [Rattus norvegicus]
 gi|293351685|ref|XP_002727825.1| PREDICTED: proteasome subunit alpha type-3-like [Rattus norvegicus]
 gi|47169488|tpe|CAE48381.1| TPA: proteasome subunit alpha type 3-like [Rattus norvegicus]
          Length = 255

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 55/167 (32%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 33  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVI 121
              ++   + +    +        R+  Y+                 +   +      + 
Sbjct: 91  IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                 +       A G     A +    L   + +  ++ ++   I
Sbjct: 151 MIDPSGVSYGYWGCATGKARQAAKTEIEKLQMKEMTCCDVVKEVAKI 197


>gi|254580341|ref|XP_002496156.1| ZYRO0C11770p [Zygosaccharomyces rouxii]
 gi|238939047|emb|CAR27223.1| ZYRO0C11770p [Zygosaccharomyces rouxii]
          Length = 260

 Score = 40.4 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 49/163 (30%), Gaps = 18/163 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLL 72
            +T + +     V++  + + +    +   +  K+  + +    A  G    +       
Sbjct: 34  GSTAIGIATSEGVILGVEKRANS-PLLEADSIEKILEVDRHIGCAMSGLTADARSMIEHA 92

Query: 73  ERLEKKLEQYPNQ------LLRSSVELAK--------DWRMDKYLRNLEAMILIADKTIT 118
                    Y ++      L +S  +LA         + R+      +  +I   DK   
Sbjct: 93  RTAAVTHNLYYDENISVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGYDKDDG 152

Query: 119 L-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               AIGSG   A S  +    +  + +E
Sbjct: 153 YQLFHAEPSGTFYRYNAKAIGSGSEGAQSELQNEWHSSLTLKE 195


>gi|72391542|ref|XP_846065.1| proteasome alpha 3 subunit [Trypanosoma brucei TREU927]
 gi|62175679|gb|AAX69811.1| proteasome alpha 3 subunit, putative [Trypanosoma brucei]
 gi|70802601|gb|AAZ12506.1| proteasome alpha 3 subunit, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
 gi|261329602|emb|CBH12584.1| proteasome alpha 3 subunit, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 286

 Score = 40.4 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 44/164 (26%), Gaps = 19/164 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQT----VMKANARKVRRL----GKGNIIAGFAGSSA 66
           A TI+ +   G VV+  +     G      +   N    +        G  +AG    + 
Sbjct: 31  AGTIIGILTTGGVVLGAERGQQHGLFDTENMEDRNISGEKVYKISNHLGCSVAGVTSDAY 90

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL-------RNLEAMILIADKTITL 119
                      +   Y  Q   ++ +L +    +K L       R      L A      
Sbjct: 91  ALINYARLSAAR-HFYSFQEPIAAEDLCRMVCDEKQLYTQYGGVRPFGVSFLFAGWDRHY 149

Query: 120 ---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +               A+G     A S  +     + + EE
Sbjct: 150 GYQLYHTDASGNYSAWRAYAVGQNDQVAQSLLKRDWKPELTLEE 193


>gi|145506186|ref|XP_001439059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406232|emb|CAK71662.1| unnamed protein product [Paramecium tetraurelia]
          Length = 249

 Score = 40.4 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 50/165 (30%), Gaps = 14/165 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTLLE 73
            + L V  +  +++A + Q          ++ K+  + +   ++++G    +        
Sbjct: 32  GSALGVLTNDGMILATEKQEVSHLLEHSKHSEKIYPIDRHIFSVVSGHTADANILINYAR 91

Query: 74  RLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITL-VITGM 124
                            QL+ +  +  ++       R      L A  DK     + +  
Sbjct: 92  EAAANHRYQFQDNIGLEQLIINICDYKQNKTQVGGQRPFGTAFLFAGYDKENGFQLFSTD 151

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAM 166
                      AIG     A S  +       + E   +IA KA+
Sbjct: 152 PSGNYAGWKATAIGKNNLAANSYLKQDYKDNLTLEQGLDIAIKAL 196


>gi|115731009|ref|XP_794651.2| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 2 [Strongylocentrotus purpuratus]
          Length = 97

 Score = 40.4 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 1/85 (1%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L ++    V++A D        V K +  K+  L    ++   AG S D     E ++K 
Sbjct: 5   LGIQGPDYVLLASDMNAGRSVFVFKHDQEKMFPL-SSKLLMLCAGESGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL 103
           ++ Y  +        A      K L
Sbjct: 64  IQLYKIRNGYELSPKAAANFTRKNL 88


>gi|14594915|emb|CAC43318.1| putative alpha3 proteasome subunit [Nicotiana tabacum]
          Length = 167

 Score = 40.4 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 36/130 (27%), Gaps = 5/130 (3%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           +A + + +     VV+ G+ +V+        +  K+ ++        AG    +      
Sbjct: 25  NAGSAIGILAKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINT 84

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT--ITLVITGMGDVLE 129
              ++ +   +  Q      +L +     K        +     +          G  L 
Sbjct: 85  AR-VQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLY 143

Query: 130 PENGVMAIGS 139
             +     G 
Sbjct: 144 MSDPSGNYGG 153


>gi|195382410|ref|XP_002049923.1| GJ20480 [Drosophila virilis]
 gi|194144720|gb|EDW61116.1| GJ20480 [Drosophila virilis]
          Length = 252

 Score = 40.4 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 48/161 (29%), Gaps = 14/161 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            + T++ +R    VV+A +  V + +      AR++  + K   +A  AG  AD   + +
Sbjct: 33  KSGTVIGIRGKDCVVLAVEEIV-VDKLYEVDAARRIFTIEKNIGMA-IAGLMADGNFVAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE------------AMILIADKTITLVI 121
              ++   +  Q  R+        R+  Y+                      +     + 
Sbjct: 91  IARQEAANFRQQFERTIPLKHLCDRVAGYIHAYTLYSAVRPFGLSVIFASWDETDGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
                         A G     A +          S +E+ 
Sbjct: 151 KIEPSGTSFGYYACASGKAKQQAKTEMEKYKFADMSTDELV 191


>gi|121706829|ref|XP_001271642.1| proteasome component Pre1, putative [Aspergillus clavatus NRRL 1]
 gi|119399790|gb|EAW10216.1| proteasome component Pre1, putative [Aspergillus clavatus NRRL 1]
          Length = 182

 Score = 40.4 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 38/134 (28%), Gaps = 12/134 (8%)

Query: 38  GQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDW 97
           G T++KA   K R+L +   +  ++G + D     E ++  +  Y  +        A   
Sbjct: 3   GPTILKAEDDKTRQLSQHT-LMAYSGEAGDTVQFAEYIQANIALYTMRNDTELRPKAVAN 61

Query: 98  ---------RMDKYLRNLEAMILIADK--TITLVITGMGDVLEPENGVMAIGSGGSYALS 146
                       +    +  ++   D       +               A G    Y LS
Sbjct: 62  FVRGELARSLRSRNPYTVNLLLGGVDTITQEPHLYWIDYLSALAPVPYAAHGYAQYYCLS 121

Query: 147 AARALMSTQNSAEE 160
                     S E+
Sbjct: 122 ILDKHHHPDISLEQ 135


>gi|9186906|dbj|BAA99540.1| alpha 4 subunit of 20S proteasome [Oryza sativa Japonica Group]
          Length = 248

 Score = 40.4 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/192 (9%), Positives = 46/192 (23%), Gaps = 23/192 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A     +        
Sbjct: 29  KGNAAVGVRGSDTVVLGVEKKSTPKLQ-DSRSVRKIASLDTHIALACAGLKADARVL--N 85

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           R   + + +   +  +         +A   +       +    L               +
Sbjct: 86  RARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPAL 145

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSIAADICVYTNH 178
                          A G   +             +     ++A +A+    +    +  
Sbjct: 146 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETIKLAIRALLEVVE----SGG 201

Query: 179 -NIVLETLKVGD 189
            NI +  +   D
Sbjct: 202 KNIEIAVMTQKD 213


>gi|194905074|ref|XP_001981118.1| GG11887 [Drosophila erecta]
 gi|190655756|gb|EDV52988.1| GG11887 [Drosophila erecta]
          Length = 254

 Score = 40.4 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 56/190 (29%), Gaps = 21/190 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T L +     V++A + +           A ++ RL +        G+ AD   L   L 
Sbjct: 33  TCLGILAKNGVILATE-RSVDKLLDSSIPAPRICRLNEDAACCA-TGNKADGNVLTTELR 90

Query: 77  KKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGM 124
              +QY           QL+ +  ++ + +      R      L           +    
Sbjct: 91  LIAQQYVSTYGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQSD 150

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALM------STQN-SAEEIARKAMSIAADICVYTN 177
                       IG     A+   +  +      S     A+++A K M +  D    T 
Sbjct: 151 PSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYASPSLEEAKDVAIKVMGMTLDRDSLTP 210

Query: 178 HNIVLETLKV 187
             + +  L+ 
Sbjct: 211 AKLEMAVLQR 220


>gi|159462714|ref|XP_001689587.1| 20S proteasome alpha subunit D [Chlamydomonas reinhardtii]
 gi|158283575|gb|EDP09325.1| 20S proteasome alpha subunit D [Chlamydomonas reinhardtii]
          Length = 254

 Score = 40.4 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 46/167 (27%), Gaps = 16/167 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + V+    VV+  + + +          RK+ ++     +A FAG +ADA  L+ 
Sbjct: 30  KGALAVGVKGKDTVVLGVEKKSTAKLQDA-RTVRKIVKVDDHICLA-FAGLTADARVLVN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIADK------TITLVI 121
           R   + + Y   L            +A   +       +    +              + 
Sbjct: 88  RARIEAQSYRLTLDEKVTVDYITKYIAGVQQRYTQSGGVRPFGISTLIVGFDPLGAPQLF 147

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                         AIG              +        ++A +A+
Sbjct: 148 QTDPSGTWSAWKANAIGRNSKTIREFLEKHYADTAGKETVKLAIRAL 194


>gi|167376869|ref|XP_001734187.1| proteasome subunit alpha type-3 [Entamoeba dispar SAW760]
 gi|165904448|gb|EDR29669.1| proteasome subunit alpha type-3, putative [Entamoeba dispar SAW760]
          Length = 247

 Score = 40.4 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 63/171 (36%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T L+++    VV   +  + + + + K++ +++  +G    I   AG   DA  L +
Sbjct: 33  NSATALSIKCVDGVVFGVEKLI-ISKMIDKSSNKRIFNVGTHIGITC-AGFLPDARKLAK 90

Query: 74  RLEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           + +++ E +                     +++ +   LR     +LI            
Sbjct: 91  KAQEEAESFKENYGMNIPVKVLAEKIAMYMQNYTLYGSLRPFGCSLLIGGVDQHGYSLHY 150

Query: 125 GDVLEPENGVMA--IGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
            +      G  A  IG G     +    +  +Q + EE   K + I  D+C
Sbjct: 151 IEPSGTTYGYFANGIGKGKQICKNELEKINFSQITCEEALIKLVEI-IDLC 200


>gi|195132358|ref|XP_002010610.1| GI21618 [Drosophila mojavensis]
 gi|193907398|gb|EDW06265.1| GI21618 [Drosophila mojavensis]
          Length = 236

 Score = 40.4 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 55/179 (30%), Gaps = 16/179 (8%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           V   D      M     + +     VV+    ++ L   +   +  KV+ +G    I  F
Sbjct: 25  VKQVDYANTCAMKGEPAVGIVTLDGVVLGTQKRLKLKYAI-GESVEKVKEIGPTMGI-TF 82

Query: 62  AGSSADAFTLLERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILI 112
           +G   D   + +   K + ++          + L+RS     ++      +R     +L+
Sbjct: 83  SGLFPDFRIITKLYRKTIAEFSLVHDHPLPVHCLMRSVSTSMQELTQSTGVRPFGLSLLL 142

Query: 113 AD--KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
           A        +               AIG                +  AE+   +A +A+
Sbjct: 143 AGFSDNRGQLYFMDAAGSNSAYKACAIGRHMHERTIFLEKKYRKRMDAEDGVSLAVQAL 201


>gi|195022115|ref|XP_001985520.1| GH17107 [Drosophila grimshawi]
 gi|193899002|gb|EDV97868.1| GH17107 [Drosophila grimshawi]
          Length = 254

 Score = 40.4 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 58/191 (30%), Gaps = 28/191 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            TIL +      +IA D         M +    +  + + ++  G  GS  D  ++   +
Sbjct: 64  GTILAIGGADFALIASD-------YCMTSELDNLFPMTRQSV-MGCIGSWVDVASMNALI 115

Query: 76  EK--KLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIADKTITL---VITGMGDV 127
           ++  ++ +  N+    +  LA         + L       ++A   +     V       
Sbjct: 116 KRRGQMRELDNRSKLPTEILASIISGTINSRRLFPWRTSTILAGLDVMGKGAVYQYNDVG 175

Query: 128 LEPENGVMAIGSGGSYALSAA-----RALMSTQNS---AEEIARKAMSIAADICVYT--N 177
                    +GS  +           +       +   A ++ R     A+   V+T   
Sbjct: 176 QRGRFLYSVLGSARNIMWPQLNHVIGKPQHYPLLTKERAFDLVRDCFMDASR--VHTVIG 233

Query: 178 HNIVLETLKVG 188
              +++ +   
Sbjct: 234 DTALIKIITKD 244


>gi|68069105|ref|XP_676463.1| Proteosome subunit alpha type 1 [Plasmodium berghei strain ANKA]
 gi|56496172|emb|CAH96545.1| Proteosome subunit alpha type 1, putative [Plasmodium berghei]
          Length = 253

 Score = 40.4 bits (93), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 20/168 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKAN--ARKVRRLGKGNIIAGFAGSSADAFTLL 72
            T  + ++    VV+ G     L + + K +    K+ ++     +   +G ++DA  L 
Sbjct: 32  GTCAVAIKSKEFVVVCG-----LKKCISKLSYHQEKLFKIDDYIGV-TMSGITSDAKVLT 85

Query: 73  ERLEKKL---------EQYPNQLLRSSVELAKDWRMDKYLRNLE-AMILIADKTITLVIT 122
           + +  +               +L++   +  +        R     +I+        +  
Sbjct: 86  KYMRNECLTHKFLFDENMNIEKLVKKVADKYQKNTQKSSKRAFGVGLIISGYFNEPHIFE 145

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
              +    E   ++ G+    + +     +    ++S +++    +  
Sbjct: 146 TKSNGSYFEYEAISFGARSHASKTYLEKNLHLFEESSLDDLVIHCLKA 193


>gi|217034382|ref|ZP_03439797.1| hypothetical protein HP9810_889g27 [Helicobacter pylori 98-10]
 gi|216943177|gb|EEC22647.1| hypothetical protein HP9810_889g27 [Helicobacter pylori 98-10]
          Length = 62

 Score = 40.4 bits (93), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 4/44 (9%)

Query: 13 MHATTILTVRK----DGVVVIAGDGQVSLGQTVMKANARKVRRL 52
            ATTIL  R         +I GDGQV+LG  V+KANA K ++L
Sbjct: 2  FEATTILGYRGEMGGKKFALIGGDGQVTLGNCVVKANATKNQKL 45


>gi|194224610|ref|XP_001491084.2| PREDICTED: similar to proteasome (prosome, macropain) subunit,
           alpha type 7 [Equus caballus]
          Length = 285

 Score = 40.4 bits (93), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 50/173 (28%), Gaps = 26/173 (15%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA---GF-----AGSSADAFT 70
           + VR   +VV+  + + S+ +   +   RK+  L     +A   G      AG +ADA  
Sbjct: 61  VGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDNVCMAFAGGILFAIVAGLTADARI 119

Query: 71  LLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIAD------KTIT 118
           ++ R   + + +   +            +A   +            + A           
Sbjct: 120 VINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTP 179

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALM-----STQNSAEEIARKAM 166
            +               AIG G                  T +   ++  KA+
Sbjct: 180 RLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKAL 232


>gi|294936013|ref|XP_002781591.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
           50983]
 gi|239892451|gb|EER13386.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
           50983]
          Length = 112

 Score = 40.4 bits (93), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 23/82 (28%), Gaps = 1/82 (1%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +     V+IA D  V     V              N +   AG  AD+   LE + + +
Sbjct: 7   GIAGKDWVIIAADSHV-EQSIVKFKTTEDKIYEMDNNKLVAAAGPQADSNQFLEFISRNV 65

Query: 80  EQYPNQLLRSSVELAKDWRMDK 101
           E Y           A       
Sbjct: 66  ELYALVNGIQLTTHALANFTRN 87


>gi|119867803|ref|YP_937755.1| 20S proteasome, A and B subunits [Mycobacterium sp. KMS]
 gi|119693892|gb|ABL90965.1| 20S proteasome, A and B subunits [Mycobacterium sp. KMS]
          Length = 233

 Score = 40.4 bits (93), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 21/164 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T ++ +R    +V+  D Q++     +   A+K+  LGK     G +GS A  + L +  
Sbjct: 2   TVVIALRCADGIVLGADSQITEPARGLTYPAQKLHGLGK-RAAWGGSGSRAVLYDLEQLF 60

Query: 76  EKKLE-----QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------------DKTIT 118
           + + E     +   + L++ V    +   D ++  +                        
Sbjct: 61  DAQPETIVEAKDVGRALQARVVPVLEHHYDNFIEKVPGESASGATPATYVLAAGYSDGEP 120

Query: 119 LVITGMGDVL---EPENGVMAIGSGGSYALSAARALMSTQNSAE 159
            ++      L     E G  A+GSG   A  A   L + + S  
Sbjct: 121 FIVDIDPHGLIGHYEETGFHAVGSGAPMAQQARALLANFRMSER 164


>gi|258564612|ref|XP_002583051.1| proteasome component C1 [Uncinocarpus reesii 1704]
 gi|237908558|gb|EEP82959.1| proteasome component C1 [Uncinocarpus reesii 1704]
          Length = 276

 Score = 40.0 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    V++A +  +S    ++K  A K       NI    AG + D    + 
Sbjct: 14  NGGTAIGIRCKDGVILAVEKIIS--SKLLKPGANKRIATVDRNIGIVSAGLAPDGRHFVS 71

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   +               R+  Y+   +A  L +      V   +G     
Sbjct: 72  RARDEAASWRGTYKGPIPTAVLANRLGGYV---QAYTLYSSVRPFGVTAIVGGWDSE 125


>gi|126320684|ref|XP_001370298.1| PREDICTED: similar to proteasome beta 2 subunit [Monodelphis
           domestica]
          Length = 183

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 47/162 (29%), Gaps = 31/162 (19%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    +++A D        V  +N  ++             G + D     E ++K 
Sbjct: 5   IGIQGSDYILVASD-------CVAASNIVQM-----------SVGEAGDTVQFAEYIQKN 46

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADK-TITLVITGMGDVL 128
           ++ Y  +        A      + L          ++  ++   D+     +        
Sbjct: 47  VQLYKMRNGYELSPTAAANFTHRNLAYYLRTRTPYHVNLLLATYDEHEGPALYYMGYLAA 106

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
             +    A G G    LS          +   A E+ +K + 
Sbjct: 107 LAKAPFAAHGYGAFLTLSILDHFYKPSITREEAVELLKKCLE 148


>gi|321469364|gb|EFX80344.1| hypothetical protein DAPPUDRAFT_230922 [Daphnia pulex]
          Length = 234

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 51/159 (32%), Gaps = 13/159 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    VV+A + +        + +  K+  +     +  ++G   D   L+ +  K 
Sbjct: 36  VGIKAANGVVLATEKKH-RSILYEEHSVHKIEMITPKIGMV-YSGMGPDYRLLVRQARKM 93

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDV 127
            +QY           QL++    L +++     +R     +L+   D+    +       
Sbjct: 94  AQQYWVTYQEQIPTAQLVQRVATLMQEYTQSGGVRPFGVSLLMCGWDEGRPYLFQCDPSG 153

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      +     ++    A+
Sbjct: 154 AYFAWKATAMGKNYINGKTFLEKRYNEDLELDDAVHTAI 192


>gi|67470185|ref|XP_651063.1| proteasome subunit alphaType3 [Entamoeba histolytica HM-1:IMSS]
 gi|56467746|gb|EAL45677.1| proteasome subunit alphaType3, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 247

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T L+++    VV   +  + + + + K++ +++  +G    I   AG   DA  L +
Sbjct: 33  NSATALSIKCIDGVVFGVEKLI-ISKMIEKSSNKRIFNVGTHVGITC-AGFLPDARKLFK 90

Query: 74  RLEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +  ++ E +                     ++  +   LR     +LI            
Sbjct: 91  KANEEAESFKENYGMNIPVKVLAEKIAMYMQNHTLYGSLRPFGCSLLIGGVDQHGYSLHY 150

Query: 125 GDVLEPENGVMA--IGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
            +      G  A  IG G     +    +  +Q + EE   K + I  D+C
Sbjct: 151 IEPSGTTYGYFANGIGKGKQICKNELEKINFSQITCEEALVKLVEI-IDLC 200


>gi|195401523|ref|XP_002059362.1| GJ18434 [Drosophila virilis]
 gi|194142368|gb|EDW58774.1| GJ18434 [Drosophila virilis]
          Length = 244

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 42/161 (26%), Gaps = 10/161 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V +          + G ++ G    S          
Sbjct: 38  TTVALKSGDCAVVATQKKVTEKNIVPETVTHLFGITKQIGCVMTGRIADSRSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
                    Y   +      +A   ++      +  +          D+    V      
Sbjct: 98  AANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLISYDDELGPCVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                    ++G+    A S          S E+  + A++
Sbjct: 158 GYYCGFRACSVGAKMIDANSFLEKKYKNNLSEEKTIQLAIT 198


>gi|71651059|ref|XP_814215.1| proteasome alpha 3 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70879168|gb|EAN92364.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi]
          Length = 286

 Score = 40.0 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 44/165 (26%), Gaps = 21/165 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI---------IAGFAGSS 65
           A T++ +   G VV+  +  V         N       G+            +AG    +
Sbjct: 31  AGTVIGILTTGGVVLGAEKGV-QNSLFDSENMEDNNISGEKMYKIASHIGCSVAGVTSDA 89

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKT 116
                    L      Y  Q   ++ +L +    +K L              ++   D+ 
Sbjct: 90  YALLNYAR-LSANRHHYTYQEPMAAEDLCRLLCDEKQLYTQYGGVRPFGVSFLLAGWDRH 148

Query: 117 ITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
               +               AIG     A S  +     + + +E
Sbjct: 149 HGYQLYHTDTSGNYNAWRAYAIGQNDQVAQSLLKRDWKPELTLDE 193


>gi|209737832|gb|ACI69785.1| Proteasome subunit alpha type-2 [Salmo salar]
 gi|221219942|gb|ACM08632.1| Proteasome subunit alpha type-2 [Salmo salar]
 gi|303665689|gb|ADM16199.1| Proteasome subunit alpha type-2 [Salmo salar]
          Length = 234

 Score = 40.0 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/157 (10%), Positives = 44/157 (28%), Gaps = 9/157 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERLEK 77
           + ++    VV+A + +         +  +        G + +G             +L +
Sbjct: 36  VGIKASNGVVLATEKKQKSILYDETSVHKVEMITKHIGMVYSGMGPDYRVLLRRARKLAQ 95

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLE 129
           +            QL++    + +++     +R     +LIA  D     +         
Sbjct: 96  QYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDDDHPYLFQSDPSGAY 155

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 A+G       +      +     E+    A+
Sbjct: 156 FAWKATAMGKNYVNGKTFLEKRYNVDLELEDAIHTAI 192


>gi|294909815|ref|XP_002777858.1| proteasome subunit alpha1, putative [Perkinsus marinus ATCC 50983]
 gi|239885820|gb|EER09653.1| proteasome subunit alpha1, putative [Perkinsus marinus ATCC 50983]
          Length = 250

 Score = 40.0 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 51/179 (28%), Gaps = 18/179 (10%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
             AVK    T L ++    V + G  ++              R     G +IAG    + 
Sbjct: 27  FKAVKTSGLTCLALKGKNTVAVVGQKKIPDKLQDGSFTNSIYRITSNLGVVIAGMPADAR 86

Query: 67  DAFTLLERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEA---MILIADKTI 117
                  +   + E         + L +    LA+ +    Y+R          I D+  
Sbjct: 87  ALVNRARQTASEYEDKNGCEIPCHYLAKKIANLAQVYTQHAYMRPYGVIALFFGIDDEFG 146

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN--------SAEEIARKAMSI 168
             ++              A GS    A +A   ++  +            E   +A++ 
Sbjct: 147 PQLLKVDPAGHYVGCKAAAAGSKEQEATNALEKIVRKRMDSGATEGFDETETVEEAIAA 205


>gi|329765071|ref|ZP_08256655.1| proteasome subunit alpha [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138448|gb|EGG42700.1| proteasome subunit alpha [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 245

 Score = 40.0 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/154 (10%), Positives = 38/154 (24%), Gaps = 16/154 (10%)

Query: 14  HATTILTVRKDGVVVIAGD---GQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
             T  + ++    V+IA +    ++     +     +  +      + A      A +  
Sbjct: 33  RGTIAVGIKSKEGVIIAVEEKPRKL----QITDIAQKIFQIDDHVGVAAAGYIPDARSQV 88

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDW-------RMDKYLRNLEAMILIAD--KTITLVI 121
              R   +  +           +AK              +R     +++         + 
Sbjct: 89  DNARFFSQSNKMIYDEAVEVETIAKHLADQCQQFTQYAGVRPFGVALILGGVVNNNPQIY 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ 155
                        +AIGSG            S +
Sbjct: 149 LTDPSGTYISYDAIAIGSGSDQVTDFLEKTYSKE 182


>gi|294883434|ref|XP_002770938.1| proteasome A type subunit, putative [Perkinsus marinus ATCC 50983]
 gi|239874064|gb|EER02754.1| proteasome A type subunit, putative [Perkinsus marinus ATCC 50983]
          Length = 254

 Score = 40.0 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 48/168 (28%), Gaps = 18/168 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T ++ +R     ++    +    Q+ + +  +K+ R+     +A  +G +ADA  +   
Sbjct: 32  GTAVVALRGKKHAILCAFRR---RQSDLASYQQKIFRIDDHIGVA-ISGLTADARVICSF 87

Query: 75  LEKKLEQYPNQLLRSSV-----------ELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +                       K     K    +  ++   D+    +   
Sbjct: 88  MRDECLSHKFTYDTPMSVGRLVNKIGVESQEKTQVASKRPYGVGLLVAGYDENGPHIYET 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM---STQNSAEEIARKAMSI 168
                  E   MAIG     A +               +E+    +  
Sbjct: 148 CPSGNIFEYYAMAIGGRSQSARTYLENNYEGFDNSEDQKELLMHGLKA 195


>gi|261201274|ref|XP_002627037.1| proteasome component C1 [Ajellomyces dermatitidis SLH14081]
 gi|239592096|gb|EEQ74677.1| proteasome component C1 [Ajellomyces dermatitidis SLH14081]
 gi|239611741|gb|EEQ88728.1| proteasome component C1 [Ajellomyces dermatitidis ER-3]
 gi|327358202|gb|EGE87059.1| proteasome subunit alpha type [Ajellomyces dermatitidis ATCC 18188]
          Length = 297

 Score = 40.0 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 7/140 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  ++       AN +++  + +   I   +G   D    + 
Sbjct: 33  NGGTSIGIRCKDGVVLAVEKIITSKLLKPGAN-KRIFTVDRHIGIV-SSGLLPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVIT-GMGDVLEPEN 132
           R   + + +               R+  Y    +A  L +      V +   G   E E 
Sbjct: 91  RARDEADDWRFTYKGPIATHVLASRLGGY---AQAYTLYSSVRPFGVTSIIGGWDSELEL 147

Query: 133 GVMA-IGSGGSYALSAARAL 151
            V   +GSG         A 
Sbjct: 148 PVDGQVGSGPKSGAGGKVAN 167


>gi|168002708|ref|XP_001754055.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694609|gb|EDQ80956.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 249

 Score = 40.0 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 52/168 (30%), Gaps = 17/168 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    +V+  + + +           K+ RL +   +A FAG +ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDTIVLGVEKKSTTKLQDA-RTVWKILRLDEHVSLA-FAGLTADARVLVN 86

Query: 74  RLEKKLEQYPNQLLRSSVE---------LAKDWRMDKYLRNLEAMILIADKTI----TLV 120
           R   + + +   +               L + +     +R      LIA          +
Sbjct: 87  RARIECQSHRLTVEDPVTVEYITCFIAGLQQKYTQSGGVRPFGISTLIAGFDPCTGVPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE--EIARKAM 166
                          A G   +          +  + AE  ++A +A+
Sbjct: 147 YQTDPSGTFSAWKANATGHNSNSVREFLEKNHTETSGAETVKLAVRAL 194


>gi|126434286|ref|YP_001069977.1| 20S proteasome, A and B subunits [Mycobacterium sp. JLS]
 gi|126234086|gb|ABN97486.1| 20S proteasome, A and B subunits [Mycobacterium sp. JLS]
          Length = 233

 Score = 40.0 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 21/164 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T ++ +R    +V+  D Q++     +   A+K+  LGK     G +GS A  + L +  
Sbjct: 2   TVVIALRCADGIVLGADSQITEPARGLTYPAQKLHGLGK-RAAWGGSGSRAVLYDLEQLF 60

Query: 76  EKKLE-----QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------------DKTIT 118
           + + E     +   + L++ V    +   D ++  +                        
Sbjct: 61  DAQPETIVEAKDVGRALQARVVPVLEHHYDNFIEKVPGESASGATPATYVLAAGYSDGEP 120

Query: 119 LVITGMGDVL---EPENGVMAIGSGGSYALSAARALMSTQNSAE 159
            ++      L     E G  A+GSG   A  A   L + + S  
Sbjct: 121 FIVDIDPHGLIGHYEETGFHAVGSGAPMAQQARALLANFRMSER 164


>gi|315045620|ref|XP_003172185.1| hypothetical protein MGYG_04776 [Arthroderma gypseum CBS 118893]
 gi|311342571|gb|EFR01774.1| hypothetical protein MGYG_04776 [Arthroderma gypseum CBS 118893]
          Length = 309

 Score = 40.0 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 36/117 (30%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN R        N+    +G   D    + 
Sbjct: 41  NGGTSIGIRCKDGVVLAVEKLISSKLLKAGANKRIATV--DRNVGIVSSGLIPDGRHFVS 98

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + +             R+  Y+   +A  L +      +   +G     
Sbjct: 99  RARDEASSWRSTYKGPIPTDVLASRLGGYV---QAYTLYSSVRPFGISAIVGGWDSE 152


>gi|326484941|gb|EGE08951.1| proteasome component C1 [Trichophyton equinum CBS 127.97]
          Length = 201

 Score = 40.0 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + +   I   +G   D    + 
Sbjct: 33  NGGTSIGIRCKDGVVLAVEKLISSKLLKAGAN-KRIATVDRNIGIV-SSGLIPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + +             R+  Y+   +A  L +      +   +G     
Sbjct: 91  RARDEASSWRSTYKGPIPTDVLASRLGGYV---QAYTLYSSVRPFGISAIVGGWDSE 144


>gi|195026717|ref|XP_001986319.1| GH20588 [Drosophila grimshawi]
 gi|193902319|gb|EDW01186.1| GH20588 [Drosophila grimshawi]
          Length = 244

 Score = 40.0 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 42/161 (26%), Gaps = 10/161 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V +          + G ++ G    S          
Sbjct: 38  TSVALKSGDCAVVATQKKVTEKNIVPETVTHLFGITKEIGCVMTGRIADSRSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
                    Y   +      +A   ++      +  +          D+    V      
Sbjct: 98  AANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLISYDDELGPCVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                    ++G+    A S          S E+  + A++
Sbjct: 158 GYYCGFRACSVGAKMIEANSYLEKKYKNNLSEEKAIQLAIT 198


>gi|195045415|ref|XP_001991973.1| GH24506 [Drosophila grimshawi]
 gi|193892814|gb|EDV91680.1| GH24506 [Drosophila grimshawi]
          Length = 214

 Score = 40.0 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 40/169 (23%), Gaps = 17/169 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + VR     V+A     +    V     +         I     G   D+   +    
Sbjct: 12  TSVGVRGAECAVVATQKAQTDQFVVGSTATQMFTI--SNEIGCVMTGRIGDSRAQVATAR 69

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNL------------EAMILIADKTITLVITGM 124
            +   +  +        A   R+   ++                +I   D+    V    
Sbjct: 70  YEARLFQTKFNFEMPVNALCDRLADIIQAYTQIGAIRPLACSMILISCNDEVGPCVYKLD 129

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMST---QNSAEEIARKAMSIAA 170
                      A G+  + A             +  A  +A + +  A 
Sbjct: 130 PAANYSGYRACATGARMTVAQRYLECNYMNNMCEMKAINLAIRTLKAAT 178


>gi|47271246|gb|AAT27293.1| AT17601p [Drosophila melanogaster]
 gi|220950974|gb|ACL88030.1| Prosalpha7-PB [synthetic construct]
 gi|220958022|gb|ACL91554.1| Prosalpha7-PB [synthetic construct]
          Length = 235

 Score = 40.0 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 16/163 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            + T++ +R    VV+A +  ++       A  R         I    AG  AD   + +
Sbjct: 33  KSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKN--IGMAVAGLVADGNFVAD 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
              ++   Y  Q  ++        R+  Y+        +    +++++   G        
Sbjct: 91  IARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASFG-------- 142

Query: 134 VMAIGSGGSYALSAARAL-MSTQNSAEEIARKAMSIAADICVY 175
             A  SG +  L+      +      +E+       A +I +Y
Sbjct: 143 YFACASGKAKQLAKTEMEKLKMDMRTDELVE----SAGEI-IY 180


>gi|67466866|ref|XP_649572.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
 gi|56466043|gb|EAL44184.1| proteasome alpha subunit, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 247

 Score = 40.0 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T L+++    VV   +  + + + + K++ +++  +G    I   AG   DA  L++
Sbjct: 33  NSATALSIKCIDGVVFGVEKLI-ISKMIEKSSNKRIFNVGTHVGITC-AGFLPDARKLVK 90

Query: 74  RLEKKLEQYPNQLLR---------SSVELAKDWRMDKYLRNLEAMILIADKTITLVITGM 124
           +  ++ E +                     ++  +   LR     +LI            
Sbjct: 91  KANEEAESFKENYGMNIPVKVLAEKIAMYMQNHTLYGSLRPFGCSLLIGGVDQHGYSLHY 150

Query: 125 GDVLEPENGVMA--IGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
            +      G  A  IG G     +    +  +Q + EE   K + I  D+C
Sbjct: 151 IEPSGTTYGYFANGIGKGKQICKNELEKINFSQITCEEALVKLVEI-IDLC 200


>gi|322490741|emb|CBZ26005.1| putative proteasome alpha 1 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 264

 Score = 40.0 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 50/168 (29%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +  + V+    VV+    +  + +    +   KV  + +  +    +G  AD   L  
Sbjct: 31  NGSATVGVKGRDYVVLTALKRSPVAEL--SSYQEKVFEIDEH-VGMSISGLVADGRVLAR 87

Query: 74  RLEKKL--EQYPNQLLRSSVELAKD---------WRMDKYLRNLEAMILIADKTITLVIT 122
            L  +    +Y         ++A               K    +  ++   D+    +  
Sbjct: 88  FLRTECMNYRYMYSDGMPMNQMADMVGEKHQRHIQFGGKRPFGVGLLLAGYDRQGPHLYQ 147

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSI 168
            +      +    A+G     + +         T  + +E+   A+  
Sbjct: 148 TVPSGDVYDYKATAMGVRSQASRTYLEKHFVHFTDCTLDELVVHALKA 195


>gi|156036266|ref|XP_001586244.1| hypothetical protein SS1G_12821 [Sclerotinia sclerotiorum 1980]
 gi|154698227|gb|EDN97965.1| hypothetical protein SS1G_12821 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 348

 Score = 40.0 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 2/93 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    VV+A +  ++       AN R        ++ A  +G   D    + 
Sbjct: 87  NGGTSVGIKCKDGVVLAVEKIITSKLLKAGANKRIATI--DRHMGAVSSGLVPDGRHFIS 144

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
           R   +   + N             RM  YL+  
Sbjct: 145 RARDEAASWRNVYKTPITTSDLASRMGGYLQAY 177


>gi|47185648|emb|CAF87242.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 99

 Score = 40.0 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 1/89 (1%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++    V++A D   +     MK +  K+ +L +  ++    G + D     E ++K 
Sbjct: 5   IGIQGSDFVLVASDNVAASSIIQMKHDYDKMFKLSEKILLLC-VGEAGDTVQFAEYIQKN 63

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLE 107
           ++ Y  +        A      K L    
Sbjct: 64  VQLYKMRNGYELSPSAAANFTRKNLAEYL 92


>gi|322830351|gb|EFZ33414.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi]
          Length = 292

 Score = 40.0 bits (92), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 44/165 (26%), Gaps = 21/165 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI---------IAGFAGSS 65
           A T++ +   G VV+  +  V         N       G+            +AG    +
Sbjct: 37  AGTVIGILTTGGVVLGAEKGV-QNSLFDSENMEDKNISGEKMYKIASHIGCSVAGVTSDA 95

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKT 116
                    L      Y  Q   ++ +L +    +K L              ++   D+ 
Sbjct: 96  YALLNYAR-LSANRHHYTYQEPMAAEDLCRLLCDEKQLYTQYGGVRPFGVSFLLAGWDRH 154

Query: 117 ITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
               +               AIG     A S  +     + + +E
Sbjct: 155 HGYQLYHTDTSGNYNAWRAYAIGQNDQVAQSLLKRDWKPELTLDE 199


>gi|326472784|gb|EGD96793.1| proteasome subunit alpha type-3 [Trichophyton tonsurans CBS 112818]
          Length = 300

 Score = 39.6 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + +   I   +G   D    + 
Sbjct: 33  NGGTSIGIRCKDGVVLAVEKLISSKLLKAGAN-KRIATVDRNIGIV-SSGLIPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + +             R+  Y+   +A  L +      +   +G     
Sbjct: 91  RARDEASSWRSTYKGPIPTDVLASRLGGYV---QAYTLYSSVRPFGISAIVGGWDSE 144


>gi|242003283|ref|XP_002422679.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
 gi|212505501|gb|EEB09941.1| proteasome subunit alpha type, putative [Pediculus humanus
           corporis]
          Length = 293

 Score = 39.6 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 47/151 (31%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + ++     V+    + S     + A+ +K+  +     I+  +G +ADA  L   
Sbjct: 45  GSATVGLKNKTHAVLIALKRASSE---LSAHQKKIIPIDSHIGIS-ISGLTADARILSRY 100

Query: 75  LEKKL--EQYPNQLLRSSVEL---------AKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +    +Y +        L             R DK    +  +I   D     +   
Sbjct: 101 MRTECLNHKYVHDEELPVSRLITNIGNKMQVCTQRYDKRPYGVGLLIAGFDDQGPHIYQT 160

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                  +   MAIGS    A +     +  
Sbjct: 161 CPSANYFDCKAMAIGSRSQSARTYLEKHLEE 191


>gi|196015795|ref|XP_002117753.1| hypothetical protein TRIADDRAFT_33023 [Trichoplax adhaerens]
 gi|190579638|gb|EDV19729.1| hypothetical protein TRIADDRAFT_33023 [Trichoplax adhaerens]
          Length = 235

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
              ++ ++    VV+A   + +     + AN +KV  +     + GF+G +ADA  L + 
Sbjct: 31  GAAVVGIKSRTHVVLAAFKRATDD---LAANQKKVLAIDDHIGV-GFSGLTADAQVLTKF 86

Query: 75  LEKKL--EQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADKTITLVITG 123
           L  +    +Y      S   L                +    +  ++   D+T + +I  
Sbjct: 87  LRTECLNSKYAYNTPHSVTRLIAALGAKMQICTQVYGRRPFGVGFLVAGFDETGSHLIQT 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                  +   MAIG+    A +     +  
Sbjct: 147 CPSSNYYDCKAMAIGARSQSARTYMERKLEE 177


>gi|85116600|ref|XP_965087.1| proteasome component C1 [Neurospora crassa OR74A]
 gi|28926889|gb|EAA35851.1| proteasome component C1 [Neurospora crassa OR74A]
 gi|38567096|emb|CAE76392.1| probable 20S proteasome subunit C1 [Neurospora crassa]
          Length = 297

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/198 (10%), Positives = 54/198 (27%), Gaps = 45/198 (22%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +T + +R    +V+A +  ++    ++K  A K       ++   ++G   D    ++
Sbjct: 33  NGSTSIGIRCKDGIVLAAEKVIT--SKLLKQGANKRIATVDRHLGIVYSGMIPDGRHFVD 90

Query: 74  RLEKKLEQYPNQLLRSSVEL---------AKDWRMDKYLRNLEAMILIADKTI------- 117
           R   +   + +                   + + + + +R      +I            
Sbjct: 91  RARDEARGWRDNYKTPISTKDLAGRMGGYMQAYTLYQSVRPFGITAIIGGYDSELDTPVE 150

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARAL---- 151
                                   +       L       A G G   A +    L    
Sbjct: 151 GEVGSGPSVGAGGKVEGKKHGGPFLYMVEPSGLYWGYYGAATGKGRQAAKAELEKLDLSS 210

Query: 152 -MSTQNSAEEIARKAMSI 168
              +  + E+  ++A  I
Sbjct: 211 DGESSLTLEQAVKEAARI 228


>gi|324537662|gb|ADY49511.1| Proteasome subunit beta type-3 [Ascaris suum]
          Length = 130

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 14/115 (12%)

Query: 90  SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-DVLEPENGVMAIGSGGSYALSAA 148
              L    R   YL       L        +        +      +A+G+G  Y L   
Sbjct: 16  ISNLLYQHRFGGYLTEPLVAGLDPVTNKAYICGMDTIGCIAAPKDFVAVGTGTEYLLGVC 75

Query: 149 RALMSTQNSAEEIAR---KAMSIAADIC--------VY--TNHNIVLETLKVGDE 190
                   +A+E+     ++M  A +          +Y  T + + ++T+K   +
Sbjct: 76  EGFWHENMNADELFEATAQSMLSAMERDAASGWGVLIYTITKNKVNIKTIKARMD 130


>gi|294914356|ref|XP_002778255.1| proteasome A type subunit, putative [Perkinsus marinus ATCC 50983]
 gi|239886458|gb|EER10050.1| proteasome A type subunit, putative [Perkinsus marinus ATCC 50983]
          Length = 254

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 15/150 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T ++ +R     ++    +    Q+ + +  +K+ R+     +A  +G +ADA  +   
Sbjct: 32  GTAVVALRGKKHAILCAFRR---RQSDLASYQQKIFRIDDHIGVA-ISGLTADARVICSF 87

Query: 75  LEKKLEQYPNQLLRSSV-----------ELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +                       K     K    +  ++   D+    +   
Sbjct: 88  MRDECLSHKFTYDTPMSVGRLVNKIGVESQEKTQVASKRPYGVGLLVAGYDENGPHIYET 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS 153
                  E   MAIG     A +       
Sbjct: 148 CPSGNIFEYYAMAIGGRSQSARTYLENNYE 177


>gi|66046034|ref|YP_235875.1| hypothetical protein Psyr_2798 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63256741|gb|AAY37837.1| hypothetical protein Psyr_2798 [Pseudomonas syringae pv. syringae
           B728a]
          Length = 149

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 52/170 (30%), Gaps = 31/170 (18%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI        V IA D Q++ G T+   +  K   +     +   +G + D   L    
Sbjct: 2   TTI---AYKDGV-IAYDSQITTGNTITYDDYEKCHEVKGVKFV--MSGKTLDFEDLQS-- 53

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
                                W      RNLEA  ++ D      I    D    +  V 
Sbjct: 54  --------------------AWFGASVTRNLEAAAIVFDSERLWYIGADTDSGFWKCPVD 93

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
             G+   YA+ +      T       A +A+ +A      T   + L  +
Sbjct: 94  CKGT---YAIGSGADHALTAMDMGATAGEAVEMALKRDTGTGGQVRLLVI 140


>gi|327304519|ref|XP_003236951.1| hypothetical protein TERG_01675 [Trichophyton rubrum CBS 118892]
 gi|326459949|gb|EGD85402.1| hypothetical protein TERG_01675 [Trichophyton rubrum CBS 118892]
          Length = 300

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + +   I   +G   D    + 
Sbjct: 33  NGGTSIGIRCKDGVVLAVEKLISSKLLKAGAN-KRIATVDRNIGIV-SSGLIPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + +             R+  Y+   +A  L +      +   +G     
Sbjct: 91  RARDEASSWRSTYKGPIPTDVLASRLGGYV---QAYTLYSSVRPFGISAIVGGWDSE 144


>gi|302655444|ref|XP_003019510.1| hypothetical protein TRV_06465 [Trichophyton verrucosum HKI 0517]
 gi|291183239|gb|EFE38865.1| hypothetical protein TRV_06465 [Trichophyton verrucosum HKI 0517]
          Length = 289

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + +   I   +G   D    + 
Sbjct: 22  NGGTSIGIRCKDGVVLAVEKLISSKLLKAGAN-KRIATVDRNIGIV-SSGLIPDGRHFVS 79

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + +             R+  Y+   +A  L +      +   +G     
Sbjct: 80  RARDEASSWRSTYKGPIPTDVLASRLGGYV---QAYTLYSSVRPFGISAIVGGWDSE 133


>gi|326506152|dbj|BAJ91315.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 288

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 52/167 (31%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  + +R     V+A     +     + ++ RKV R+     +A  AG +AD   L   
Sbjct: 32  GSACVGLRSATHAVLAA---ANKSANELSSHQRKVFRVADHAGVA-LAGLTADGRVLSRF 87

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMD-----------KYLRNLEAMILIADKTITLVITG 123
           L  +   +               R+            K    +  ++   D++   +   
Sbjct: 88  LRNECINHAFVYDAPLPVSRLALRLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYN 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
                  E    AIGS    A +            + +E+ + A+S 
Sbjct: 148 CPSGNYFEYQAFAIGSRSQAAKTYLERRFEKFNAYTPDELIKDALSA 194


>gi|312076399|ref|XP_003140843.1| proteasome subunit beta type 2 [Loa loa]
 gi|307763992|gb|EFO23226.1| proteasome subunit beta type 2 [Loa loa]
          Length = 238

 Score = 39.6 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/164 (10%), Positives = 46/164 (28%), Gaps = 17/164 (10%)

Query: 19  LTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           + +  +  V++A D    + G  ++  +  K   LG    +    G   D     +  ++
Sbjct: 44  VGICTNDYVILAADRSCFAYGAIIVADDEEKKFTLGDKLAMICI-GEDGDVAQFGDWCKR 102

Query: 78  KLEQYPNQLLRSSVELA-----------KDWRMDKYLRNLEAMILIADKTITLVITGMG- 125
            ++ Y  +        +                D Y+ +       + +    + +    
Sbjct: 103 NIQLYKLRYGYEMSPRSSHHWIRRSIAEALRTQDYYVVDTLIGGYDSIENKAFLGSVDYL 162

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAM 166
                +   +  G  G    S          +  E   + +K +
Sbjct: 163 GNGIADQPYIFRGFSGRLCYSILDKTYRNDMTEAEGMDLLKKCL 206


>gi|213967399|ref|ZP_03395547.1| hypothetical protein PSPTOT1_3742 [Pseudomonas syringae pv. tomato
           T1]
 gi|213927700|gb|EEB61247.1| hypothetical protein PSPTOT1_3742 [Pseudomonas syringae pv. tomato
           T1]
          Length = 148

 Score = 39.6 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 57/175 (32%), Gaps = 41/175 (23%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI        V IA D Q++ G T+   +  K   +     +   +G ++D   L    
Sbjct: 2   TTI---AYKDGV-IAYDSQITSGNTITYDDYEKCHEVKGVKFV--MSGKTSDYEDLQS-- 53

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV- 134
                                W      RNLEA  ++ D      I    D    +  + 
Sbjct: 54  --------------------AWFGASVTRNLEAAAIVFDSERLWYIGADTDSGFWKCPID 93

Query: 135 ----MAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
                AIGSG  +AL+A      T   A E+A+K           T   + L  +
Sbjct: 94  GKGLYAIGSGADHALTAMDMGA-TAGEAVELAKK-------RDTGTGGQVRLLVI 140


>gi|194859616|ref|XP_001969415.1| GG10092 [Drosophila erecta]
 gi|190661282|gb|EDV58474.1| GG10092 [Drosophila erecta]
          Length = 282

 Score = 39.6 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 19/162 (11%)

Query: 15  ATTILTVR-KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            T  + ++ K+  V++A     S     + A  RK+  +     I+  AG +ADA  L  
Sbjct: 32  GTATVGLKNKENAVLVALCKPTSE----LSATQRKIIPIDDHLGIS-IAGLTADARVLSR 86

Query: 74  RLEKKL--EQYPNQLLRSSVEL---------AKDWRMDKYLRNLEAMILIADKTITLVIT 122
            L  +    ++   L      L             R D+    +  ++   D+    +  
Sbjct: 87  YLRSECLNYKHSYDLTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQ 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIA 162
                        +IGS    A +     +      S +EI 
Sbjct: 147 VTPSATFFNCKANSIGSRSQSARTYLEKNLKKFPDCSKDEII 188


>gi|302501466|ref|XP_003012725.1| hypothetical protein ARB_00976 [Arthroderma benhamiae CBS 112371]
 gi|291176285|gb|EFE32085.1| hypothetical protein ARB_00976 [Arthroderma benhamiae CBS 112371]
          Length = 287

 Score = 39.6 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 39/117 (33%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + +   I   +G   D    + 
Sbjct: 20  NGGTSIGIRCKDGVVLAVEKLISSKLLKAGAN-KRIATVDRNIGIV-SSGLIPDGRHFVS 77

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + +             R+  Y+   +A  L +      +   +G     
Sbjct: 78  RARDEASSWRSTYKGPIPTDVLASRLGGYV---QAYTLYSSVRPFGISAIVGGWDSE 131


>gi|255631394|gb|ACU16064.1| unknown [Glycine max]
          Length = 123

 Score = 39.6 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 24/88 (27%), Gaps = 5/88 (5%)

Query: 90  SVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-DVLEPENGVMAIGSGGSYALSAA 148
              L  + R   Y        L  D+    + T       E     +  G+       A 
Sbjct: 10  VSALLYEKRFGPYFCQPVIAGL-GDEDKPFICTMDCIGAKELAKDFVVSGTASESLYGAC 68

Query: 149 RALMSTQNSAEEIAR---KAMSIAADIC 173
            A+       EE+     +A+  + D  
Sbjct: 69  EAMFKPDMEPEELFETISQALLSSVDRD 96


>gi|195403050|ref|XP_002060108.1| GJ15428 [Drosophila virilis]
 gi|194141777|gb|EDW58193.1| GJ15428 [Drosophila virilis]
          Length = 286

 Score = 39.6 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 15/149 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++     V+     +S   + + A+ RK+  +     I+  AG +ADA  L + 
Sbjct: 32  GTATVGLKNRDYAVLVA---LSKPPSELSASQRKLIPIDDHLGIS-IAGITADARVLSKY 87

Query: 75  LEKKLEQYPNQLLRSS-----------VELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +    +                   R D+    +  +I   D+    +   
Sbjct: 88  LRSECLSYKHSYESAFPVSRLITNLGNKMQTTTQRYDRRPYGVGLLIAGYDEKGPHIYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALM 152
                      M IGS    A +     +
Sbjct: 148 EPSANFFNCVAMTIGSRSQSARTYLERNL 176


>gi|169806240|ref|XP_001827865.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
 gi|161779313|gb|EDQ31336.1| 20S proteasome subunit [Enterocytozoon bieneusi H348]
          Length = 229

 Score = 39.6 bits (91), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 62/193 (32%), Gaps = 26/193 (13%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            TT +    +  +V+  + +++    + K ++ K       N+I  FAG +ADA  ++++
Sbjct: 29  GTTTIAAIVNNSIVMVSEKKLA--NILQKPSSVKKHFKIYDNVITAFAGITADALNIIKK 86

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDK--------------YLRNLEAMILIA--DKTIT 118
                 ++               R+                Y R     +++   +K   
Sbjct: 87  CRTFCLEHEAFYGTLIPSKLLLDRICNLALKFGEKDDFNKIYSRPFGISLVLGVYEKNTP 146

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA---RKAMSIAADICVY 175
            +          E    AIG+           +   Q + +++    + +M+        
Sbjct: 147 RLFCMDPSGSYTEYRAKAIGAASEIIEQQLEVMDLEQLTLKKLVDILKHSMA-----DKM 201

Query: 176 TNHNIVLETLKVG 188
           T  N+ +  L   
Sbjct: 202 TETNVEISILTKN 214


>gi|225705628|gb|ACO08660.1| Proteasome subunit alpha type 2 [Oncorhynchus mykiss]
          Length = 234

 Score = 39.6 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  
Sbjct: 36  VGIKASNGVVLATEKK---QKSILYDETSVHKVEMITKHIGMV-YSGMGPDYRVLLRRAR 91

Query: 77  KKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMG 125
           K  +QY           QL++    + +++     +R     +LIA  D     +     
Sbjct: 92  KLAQQYFPVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDDDHPYLFQSDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      +     E+    A+
Sbjct: 152 SGAYFAWKATAMGKNYVNGKTFLEKRYNVDLELEDAIHTAI 192


>gi|195431014|ref|XP_002063543.1| GK21354 [Drosophila willistoni]
 gi|194159628|gb|EDW74529.1| GK21354 [Drosophila willistoni]
          Length = 244

 Score = 39.6 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 53/181 (29%), Gaps = 18/181 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T + ++     V+A   +V+    V +  +   R      I     G  AD+ + +++  
Sbjct: 38  TTVALKSGDCAVVASQKKVTEKNIVPETVSHLFRVTRN--IGCAMTGRIADSRSQVQKAR 95

Query: 77  KKL------EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGM 124
            +         Y   +      +A   ++      +  +          D+    V    
Sbjct: 96  YEAANFQYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDDELGPSVYKTD 155

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE---EIARKAMSIAADICVYTNHNIV 181
                      ++G+    A S          S E   ++A   +S    I  +  + I 
Sbjct: 156 PAGYFSGYRACSVGAKVIEANSYLEKKYKNNLSEEKTIQLAITCLSHVLAID-FKPNGIE 214

Query: 182 L 182
           +
Sbjct: 215 I 215


>gi|330466637|ref|YP_004404380.1| 20S proteasome subunit A/B [Verrucosispora maris AB-18-032]
 gi|328809608|gb|AEB43780.1| 20S proteasome subunit A/B [Verrucosispora maris AB-18-032]
          Length = 231

 Score = 39.6 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 50/164 (30%), Gaps = 18/164 (10%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGS---SADAFTLL 72
           T +L V     VVI  D Q++     +   A+K+  LG      G       +     L 
Sbjct: 2   TVVLAVVCSDGVVIGADSQITESDRGLSFPAQKLHPLGTCAAWGGSGARGVLNDLRPLLE 61

Query: 73  ERLEKKLEQ-YPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV---ITGMGDVL 128
           E     LE       L+  V          Y+ ++         +  L+    +  G  +
Sbjct: 62  ESATAILEAPEIGDELQERVLPVFKKHYQNYIPDVPGEDSGGGVSAYLLAAGYSQGGPWI 121

Query: 129 -----------EPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                        + G  AIGSG   A  A   L   + +   +
Sbjct: 122 VEINPNGLIGRYEDVGFHAIGSGAPMAQQAGALLSHFRMTTRTV 165


>gi|209732674|gb|ACI67206.1| Proteasome subunit alpha type-2 [Salmo salar]
          Length = 234

 Score = 39.6 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 56/159 (35%), Gaps = 17/159 (10%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           ++    VV+A + +    ++++    +  KV  + K   +A ++G   D   LL R  K 
Sbjct: 38  IKASNGVVLATEKK---QKSILYDETSVHKVEPITKHIGMA-YSGMGPDYRVLLRRARKL 93

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
            +QY           QL++    + +++     +R     +LIA  D+    +       
Sbjct: 94  AQQYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSG 153

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      +     E+    A+
Sbjct: 154 AYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|33322356|gb|AAQ06902.1|AF496235_2 heat shock protein precursor [Lactobacillus delbrueckii subsp.
          lactis]
          Length = 34

 Score = 39.6 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANA 46
          TTI +V+ +G   IAGDGQV+LG++++    
Sbjct: 2  TTICSVKYNGQTAIAGDGQVTLGKSIIAKTT 32


>gi|209880856|ref|XP_002141867.1| proteasome subunit alpha type 1 [Cryptosporidium muris RN66]
 gi|209557473|gb|EEA07518.1| proteasome subunit alpha type 1, putative [Cryptosporidium muris
           RN66]
          Length = 261

 Score = 39.6 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T ++  R + +VV+A   +     + +    +K+ ++      A  +G +ADA  L   
Sbjct: 32  GTAVIGARNNDIVVLACIKR---NISKLAGFQKKLYKIDDHIG-AAMSGITADAKVLCSY 87

Query: 75  LEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMIL-----IADKTITLVITG 123
           L  +   +      P  L R    +    ++           +       D+    +   
Sbjct: 88  LRYECLNHSFTFDSPMPLSRLVSNMGLKSQICTQEYGRRPFGVGLLIAGYDQDGPHLYET 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                  E   MA+GS      +        
Sbjct: 148 CPSGNYFEYYAMALGSRCQAGKTYLERHFEE 178


>gi|221125096|ref|XP_002156265.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 250

 Score = 39.6 bits (91), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/162 (9%), Positives = 41/162 (25%), Gaps = 8/162 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
           +++T + +R    VV   +  ++  +       R++  + +   +A  G    +     +
Sbjct: 33  NSSTAVALRCKDGVVFGVEKLITS-KLYEPGTGRRIFSIDRHIGMAVSGLMSDARQIVGI 91

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKY----LRNLEAMILIADK-TITLVITGMGD 126
                          +              Y           +   DK     +      
Sbjct: 92  ARNEAAYYRSIYGSPIPLKXXXXXXXXYTLYSAYRPFGCSVFLSSYDKVDGPELYMIEPS 151

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                    ++G     A +    L     + +E  ++   I
Sbjct: 152 GTSYGYSGCSVGKAKQNAKTEIEKLKLENLTMKEGIKEVAKI 193


>gi|170581404|ref|XP_001895669.1| proteasome subunit alpha type 2 [Brugia malayi]
 gi|158597312|gb|EDP35494.1| proteasome subunit alpha type 2, putative [Brugia malayi]
          Length = 235

 Score = 39.6 bits (91), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 55/182 (30%), Gaps = 20/182 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLERLE 76
           + +R    VV+A + ++S    V+  +  KV ++ +       G             +L 
Sbjct: 37  VGLRALDGVVLATENKIS----VLYEDQPKVEKISQHIGCVYSGMGPDYRLLVKKARKLA 92

Query: 77  KKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKT------ITLVITGM 124
            + E          QL+     + +++     +R     +L+A           L+    
Sbjct: 93  MEYELMYGEEIPTTQLVTKLAAVMQEYTQSGGVRPFGVSMLVAGWDXEPSPGRPLLFQCD 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD-ICV-YTNHNIVL 182
                      A+G     A +      S     ++    A+    +   V  T  N+ +
Sbjct: 153 PSGAYFAWKATALGKNDVNAKTFLEKRFSDSLELDDGIHTALLTLRESFDVGMTEDNVEI 212

Query: 183 ET 184
             
Sbjct: 213 AI 214


>gi|195050677|ref|XP_001992943.1| GH13363 [Drosophila grimshawi]
 gi|193900002|gb|EDV98868.1| GH13363 [Drosophila grimshawi]
          Length = 288

 Score = 39.2 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++ +   V+     +    + + A+ RK+  + +   I+  AG +ADA  L + 
Sbjct: 32  GTATVGLKNNDYAVLVA---LCKPPSELSASQRKIIAIDEHLGIS-IAGITADARVLSKY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +       + R    L         R D+    +  ++   D+    +   
Sbjct: 88  LRSECLSYKHSYGSTYPVPRLITTLGNKMQTTTQRYDRRPYGVGLLLAGYDEKGPHIYKV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                      M IGS    A +     ++T
Sbjct: 148 EPSANYFNCKAMTIGSRSQSARTYLERHLAT 178


>gi|195119249|ref|XP_002004144.1| GI18287 [Drosophila mojavensis]
 gi|193914719|gb|EDW13586.1| GI18287 [Drosophila mojavensis]
          Length = 287

 Score = 39.2 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++ +   V+     +    + + A+ RK+  +     I+  AG +ADA  L + 
Sbjct: 35  GTATVGLKNNDYAVLVA---LCKPPSELSASQRKLIPIDDHLGIS-IAGITADARVLSKY 90

Query: 75  LEKKLEQYPNQLL------RSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +         R    L         R D+    +  +I   D+    +   
Sbjct: 91  LRSECLSYKHSYGSTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLIAGYDEKGPHIYKV 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                      M IGS    A +     +ST
Sbjct: 151 EPSANFFNCKAMTIGSRSQSARTYLERHLST 181


>gi|209730576|gb|ACI66157.1| Proteasome subunit alpha type-2 [Salmo salar]
          Length = 254

 Score = 39.2 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 17/159 (10%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  K 
Sbjct: 58  IKASNGVVLATEKK---QKSILYDETSVHKVEPITKHIGMV-YSGMGPDYRVLLRRARKL 113

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
            +QY           QL++    + +++     +R     +LIA  D+    +       
Sbjct: 114 AQQYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSG 173

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      +     E+    A+
Sbjct: 174 AYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 212


>gi|115444057|ref|NP_001045808.1| Os02g0133800 [Oryza sativa Japonica Group]
 gi|1709758|sp|P52428|PSA1_ORYSJ RecName: Full=Proteasome subunit alpha type-1; AltName: Full=20S
           proteasome alpha subunit F; AltName: Full=20S proteasome
           subunit alpha-6; AltName: Full=Proteasome component C2
 gi|1066151|dbj|BAA07128.1| proteasome C2 subunit [Oryza sativa]
 gi|113535339|dbj|BAF07722.1| Os02g0133800 [Oryza sativa Japonica Group]
 gi|215737257|dbj|BAG96186.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215766599|dbj|BAG98703.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218190001|gb|EEC72428.1| hypothetical protein OsI_05746 [Oryza sativa Indica Group]
 gi|222622121|gb|EEE56253.1| hypothetical protein OsJ_05275 [Oryza sativa Japonica Group]
          Length = 270

 Score = 39.2 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 14/140 (10%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD- 100
           + ++ RKV R+     +A  AG +AD   L   L  +   +               R+  
Sbjct: 56  LSSHQRKVFRVADHAGVA-LAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLAD 114

Query: 101 ----------KYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
                     K    +  ++   D++   +          E    AIGS    A +    
Sbjct: 115 KAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLER 174

Query: 151 LMS--TQNSAEEIARKAMSI 168
                   + E++ + A+S 
Sbjct: 175 RFEGYNDYTPEQLIKDALSA 194


>gi|17562790|ref|NP_505750.1| Proteasome Alpha Subunit family member (pas-2) [Caenorhabditis
           elegans]
 gi|6093779|sp|Q27488|PSA2_CAEEL RecName: Full=Proteasome subunit alpha type-2; Short=Proteasome
           subunit alpha 2
 gi|3875311|emb|CAA98441.1| C. elegans protein D1054.2, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 231

 Score = 39.2 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 48/160 (30%), Gaps = 16/160 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLERLE 76
           + +R    VV+A +   S    V+  +  KV ++ K       G             ++ 
Sbjct: 35  VGLRAKDGVVLATENVGS----VLTDDQPKVEQISKHIGCVYSGMGPDFRILVKKARKIA 90

Query: 77  KKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIADKT----ITLVITGMGD 126
            + E          QL+     + +++     +R   A +LIA         L+      
Sbjct: 91  MEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPS 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G     A +      S     ++    A+
Sbjct: 151 GAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTAL 190


>gi|323334738|gb|EGA76111.1| Pre7p [Saccharomyces cerevisiae AWRI796]
          Length = 184

 Score = 39.2 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 45/168 (26%), Gaps = 29/168 (17%)

Query: 50  RRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLL------RSSVELAKDWRMDKYL 103
                 NI+    G +AD   L++R +  ++ Y            S+    +     K  
Sbjct: 5   FFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRF 64

Query: 104 RNLEAMILIADKTITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ----- 155
                  +IA         V +             A G+  S  +      ++ +     
Sbjct: 65  FPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEP 124

Query: 156 ------------NSAEE---IARKAMSIAADICVYTNHNIVLETLKVG 188
                        S EE   + R + + A +  +     + +  +   
Sbjct: 125 GTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGDGLEILIVTKD 172


>gi|195119356|ref|XP_002004197.1| GI19734 [Drosophila mojavensis]
 gi|193909265|gb|EDW08132.1| GI19734 [Drosophila mojavensis]
          Length = 244

 Score = 39.2 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 42/161 (26%), Gaps = 10/161 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V +          + G ++ G    S          
Sbjct: 38  TSVALKSGDCAVVATQKKVTEKNIVPETVTHLFGITKEIGCVMTGRIADSRSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
                    Y   +      +A   ++      +  +          D+    V      
Sbjct: 98  AANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLISYDDELGPCVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                    ++G+    A S          S E+  + A++
Sbjct: 158 GYYCGFRACSVGAKMIEANSYLEKKYKNNLSEEKTIQLAIT 198


>gi|301382090|ref|ZP_07230508.1| hypothetical protein PsyrptM_05638 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302061643|ref|ZP_07253184.1| hypothetical protein PsyrptK_16780 [Pseudomonas syringae pv. tomato
           K40]
 gi|302131807|ref|ZP_07257797.1| hypothetical protein PsyrptN_10472 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 159

 Score = 39.2 bits (90), Expect = 0.28,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 57/175 (32%), Gaps = 41/175 (23%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI        V IA D Q++ G T+   +  K   +     +   +G ++D   L    
Sbjct: 2   TTI---AYKDGV-IAYDSQITSGNTITYDDYEKCHEVKGVKFV--MSGKTSDYEDLQS-- 53

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV- 134
                                W      RNLEA  ++ D      I    D    +  + 
Sbjct: 54  --------------------AWFGASVTRNLEAAAIVFDSERLWYIGADTDSGFWKCPID 93

Query: 135 ----MAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
                AIGSG  +AL+A      T   A E+A+K           T   + L  +
Sbjct: 94  GKGLYAIGSGADHALTAMDMGA-TAGEAVELAKK-------RDTGTGGQVRLLII 140


>gi|148704616|gb|EDL36563.1| proteasome (prosome, macropain) subunit, alpha type 3, isoform
           CRA_a [Mus musculus]
          Length = 219

 Score = 39.2 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 50/155 (32%), Gaps = 12/155 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T + +R    VV   +  V L +   + + +++  + +   +A  AG  ADA +L +
Sbjct: 52  NSSTAIGIRCKDGVVFGVEKLV-LSKLYEEGSNKRLFNVDRHVGMA-VAGLLADARSLAD 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENG 133
              ++   + +    +        R+  Y+                              
Sbjct: 110 IAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLY----SAVRPF------GCSFMLGS 159

Query: 134 VMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             A      Y +  +      + +  ++ ++   I
Sbjct: 160 YSANDGAQLYMIDPSGVSYMKEMTCRDVVKEVAKI 194


>gi|195133824|ref|XP_002011339.1| GI16051 [Drosophila mojavensis]
 gi|193907314|gb|EDW06181.1| GI16051 [Drosophila mojavensis]
          Length = 247

 Score = 39.2 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/163 (10%), Positives = 47/163 (28%), Gaps = 12/163 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T++ +     VV+    +  L +  +   A ++ R+      A     +     +   L+
Sbjct: 35  TMVAIAGVDCVVLVV-QRKPLSKYAVTETANRIFRISDVLGCAVIGRQADCKSHVHRALQ 93

Query: 77  KKL-EQYPNQLLRSSVELAKDWRMDKYLRNLEAM---------ILIADKT-ITLVITGMG 125
           +    Q+      ++  + +       +   +A          ++  D     L+     
Sbjct: 94  EACVFQHRYGYPIAADVMCQRLADINQVYTHDANIRPLACSIVLISYDLQLGPLIYNTDP 153

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
             +         GS          ++     S +E  + A+  
Sbjct: 154 TGVPIGYRACVFGSAMQRGNYYVDSVYKYNMSKDETVKLAIRT 196


>gi|57905120|ref|XP_550819.1| AGAP001995-PA [Anopheles gambiae str. PEST]
 gi|19168518|emb|CAC94781.1| PROSAg25 protein [Anopheles gambiae]
 gi|55233382|gb|EAA01264.2| AGAP001995-PA [Anopheles gambiae str. PEST]
          Length = 234

 Score = 39.2 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 47/160 (29%), Gaps = 15/160 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           + ++    VVIA + +    ++++    +  KV  +     +   G             +
Sbjct: 36  VGIKAVNGVVIATENK---QKSILYDEHSVHKVEMVTNHIGMIYSGMGPDYRLLVKQARK 92

Query: 75  LEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGD 126
           L +             QL++    + +++     +R     +LI   D     +      
Sbjct: 93  LAQNYYLTYREPIPTSQLVQKVATVMQEYTQSGGVRPFGVSLLICGWDDGRPYLFQCDPS 152

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G   +   +      S     ++    A+
Sbjct: 153 GAYFAWKATAMGKNANNGKTFLEKRYSEDLELDDAVHTAI 192


>gi|169602124|ref|XP_001794484.1| hypothetical protein SNOG_03940 [Phaeosphaeria nodorum SN15]
 gi|160706088|gb|EAT89145.2| hypothetical protein SNOG_03940 [Phaeosphaeria nodorum SN15]
          Length = 291

 Score = 39.2 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 50/193 (25%), Gaps = 38/193 (19%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
           +  T + +R    VV+A +  V+       AN R        G + +G         +  
Sbjct: 35  NGGTAVGIRCKDGVVLALEKLVTSKLLKPGANKRIATVDRNMGIVSSGLLPDGRHFVSRA 94

Query: 73  ERLEKKLEQYPNQLLRSSVEL------AKDWRMDKYLRNLEAMILIADKTI--------- 117
                +  Q     + +S         A+ + +   +R      +IA             
Sbjct: 95  RDEAAQWRQLYKAPIPASSLADRMGSYAQAYTLYSSVRPFGITAIIAGWDSEAELPVDGQ 154

Query: 118 --------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQ 155
                                 +       L       A G G   A S    L     Q
Sbjct: 155 VGSGPATGSGGKKEGAKHGGPSLYMVEPSGLYWGYYGAATGKGRQIAKSELEKLNLSEGQ 214

Query: 156 NSAEEIARKAMSI 168
            S +E  ++A  I
Sbjct: 215 LSLQEGVKEAARI 227


>gi|326506596|dbj|BAJ91339.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326527691|dbj|BAK08120.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528863|dbj|BAJ97453.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 249

 Score = 39.2 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 40/161 (24%), Gaps = 15/161 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGVDTVVLGVEKKSTPKLQ-DSRSVRKIASLDTHVALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLV 120
           R   + + +   +            +A   +       +    L               +
Sbjct: 87  RARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTEKPAL 146

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                          A G   +             +  E I
Sbjct: 147 YQTDPSGTFSAWKANATGRNSNSMREFLEKNYKETSGKETI 187


>gi|24850286|gb|AAN63094.1| testis-specific 20S proteasome subunit alpha 3T [Drosophila
           melanogaster]
          Length = 251

 Score = 39.2 bits (90), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 23/187 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-KGNIIAGFAGSSADAFTLLER 74
            T + +     V++A +  V     +M  +    R      NI     G++AD   L+ +
Sbjct: 32  GTCVGLLAKNGVLLATERSV---DKLMDTSIPVPRISWLNENIACWPTGNTADGNVLVNQ 88

Query: 75  LEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVIT 122
           L    +QY           QL+ +  ++ + +      R     +L           +  
Sbjct: 89  LRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSLLYMGWDCASGFQLYQ 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQ-------NSAEEIARKAMSIAADICVY 175
                         IG     A+   +  + ++         A+++A K M +       
Sbjct: 149 SDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMGMTLGRDSL 208

Query: 176 TNHNIVL 182
           T   + +
Sbjct: 209 TPEKLEI 215


>gi|221106025|ref|XP_002170686.1| PREDICTED: similar to proteasome (prosome, macropain) subunit,
           alpha type, 4, partial [Hydra magnipapillata]
          Length = 168

 Score = 39.2 bits (90), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 40/141 (28%), Gaps = 16/141 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQT--VMKANARKVRRLGKGNII--AGFAGSSADAF 69
           HA T L +     VV+A + + +      V+     K+ +L +  +   AG    +    
Sbjct: 30  HAGTCLGILATDGVVLAAERRNTNKLLDDVLS---DKIYKLDENTVCSVAGITSDANVLT 86

Query: 70  TLLERLEKK---LEQYPNQLLRSSVELAKDWRMDKYLRNLEAM-----ILIADKTITL-V 120
             L    ++   L Q    + +    L    +    +            +  D  +   +
Sbjct: 87  AQLRLTAQRYLLLYQEAMPVEQLVSSLCDLKQRYTQVGGFRPFGVSLLYIGWDSRLGFQL 146

Query: 121 ITGMGDVLEPENGVMAIGSGG 141
                           IG+  
Sbjct: 147 YQSDPSGNYSGWKATCIGNNS 167


>gi|41052611|dbj|BAD08003.1| putative Proteasome subunit alpha type 1 [Oryza sativa Japonica
           Group]
 gi|42408825|dbj|BAD10085.1| putative Proteasome subunit alpha type 1 [Oryza sativa Japonica
           Group]
          Length = 245

 Score = 39.2 bits (90), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 14/140 (10%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD- 100
           + ++ RKV R+     +A  AG +AD   L   L  +   +               R+  
Sbjct: 31  LSSHQRKVFRVADHAGVA-LAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLAD 89

Query: 101 ----------KYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
                     K    +  ++   D++   +          E    AIGS    A +    
Sbjct: 90  KAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLER 149

Query: 151 LMS--TQNSAEEIARKAMSI 168
                   + E++ + A+S 
Sbjct: 150 RFEGYNDYTPEQLIKDALSA 169


>gi|154308422|ref|XP_001553547.1| hypothetical protein BC1G_08271 [Botryotinia fuckeliana B05.10]
 gi|150852812|gb|EDN28004.1| hypothetical protein BC1G_08271 [Botryotinia fuckeliana B05.10]
          Length = 298

 Score = 39.2 bits (90), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 2/93 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + ++    VV+A +  ++       AN R        ++ A  +G   D    + 
Sbjct: 33  NGGTSVGIKCKDGVVLAVEKVITSKLLKAGANKRIATI--DRHMGAVSSGLVPDGRHFVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
           R   +   + N             RM  YL+  
Sbjct: 91  RARDEAASWRNVYKTPITTADLASRMGGYLQAY 123


>gi|19921232|ref|NP_609623.1| proteasome alpha6T subunit [Drosophila melanogaster]
 gi|7298027|gb|AAF53268.1| proteasome alpha6T subunit [Drosophila melanogaster]
 gi|18447122|gb|AAL68152.1| AT30494p [Drosophila melanogaster]
 gi|24850288|gb|AAN63095.1| testis-specific 20S proteasome subunit alpha 6T [Drosophila
           melanogaster]
 gi|220950906|gb|ACL87996.1| Prosalpha6T-PA [synthetic construct]
 gi|220957896|gb|ACL91491.1| Prosalpha6T-PA [synthetic construct]
          Length = 289

 Score = 39.2 bits (90), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 52/167 (31%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + ++     V+A   + S     ++     V      ++    AG +ADA  + + 
Sbjct: 32  GAATVGLKGTDYAVLAALCRTSKDTNTLQRKIMPV----DDHVGMSIAGLTADARVVCQY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           +  +   Y +       + R    L         R D+    +  ++   D+    +   
Sbjct: 88  MRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDRRPYGVGLLVAGYDEQGPHIYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
           M          MAIGS    A +     M +      +E+   A+  
Sbjct: 148 MPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQA 194


>gi|294949392|ref|XP_002786174.1| proteasome A type subunit, putative [Perkinsus marinus ATCC 50983]
 gi|239900331|gb|EER17970.1| proteasome A type subunit, putative [Perkinsus marinus ATCC 50983]
          Length = 254

 Score = 39.2 bits (90), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 46/151 (30%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T ++ +R +   ++    +    Q+ + +  +K+ R+     +A  +G +ADA  +   
Sbjct: 32  GTAVVALRGEKHAILCAFRR---RQSDLASYQQKIFRIDDHIGVA-ISGLTADARVICSF 87

Query: 75  LEKKLEQYPNQLLRSSV-----------ELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +                       K     K    +  ++   D+    +   
Sbjct: 88  MRDECLSHKFTYDTPMSVGRLVNKIGVESQEKTQVASKRPYGVGLLVAGYDENGPHIYET 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
                  E   MAIG     A +       +
Sbjct: 148 CPSGNIFEYYAMAIGGRSQSARTYLENNYES 178


>gi|9651787|gb|AAF91273.1| 20S proteasome alpha 5 subunit [Leishmania major]
          Length = 109

 Score = 38.8 bits (89), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           +T L +R    VV+A + +V     V+ ++  K+  +    I A  +G  ADA  L+E 
Sbjct: 8  GSTSLGIRTPKGVVLAAEKRVPS-TLVVPSSMSKIMEIDSH-IAAVMSGMVADARILVEH 65

Query: 75 LEKKLEQYPNQLLRSSVELAKDWRM 99
             + + +           +     
Sbjct: 66 ARVESQNHRFTYNEPMSVESCTLAT 90


>gi|240273199|gb|EER36721.1| proteasome component [Ajellomyces capsulatus H143]
          Length = 349

 Score = 38.8 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + +   I   +G   D    + 
Sbjct: 110 NGGTSIGIRCKDGVVLAVEKIISSKLLKPGAN-KRIATVDRHIGIV-SSGLLPDGRHFVS 167

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   + + +               R+  Y    +A  L +      V + +G     
Sbjct: 168 RARDEADNWRTTYKGPISTHVLASRLGGY---AQAYTLYSSVRPFGVTSIIGGWDSE 221


>gi|322708799|gb|EFZ00376.1| proteasome subunit alpha type 3 [Metarhizium anisopliae ARSEF 23]
          Length = 321

 Score = 38.8 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 51/225 (22%), Gaps = 69/225 (30%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI---------------- 57
           +  T + +R    VV+A +  V+       AN R         +                
Sbjct: 33  NGGTSIGIRCKDGVVLAVEKVVTSKLLKPGANKRIATVDSHVGVVRNLATPLPKQTHFYT 92

Query: 58  ---------IAG--FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
                    +    ++G   D    ++R   + + +               RM  YL+  
Sbjct: 93  KRVFGAEANLCTQVYSGMVPDGRHFVDRARDESQSWRQNFKTPIPTADLASRMGGYLQAY 152

Query: 107 EAMI-------------------------------------LIADKTITLVITGMGDVLE 129
                                                    +        +       L 
Sbjct: 153 TMYGSVRPFGITAIVGGVDTSEETPVDGEVGSGPKCGAGGKVPGKHGGPFLYMIEPSGLY 212

Query: 130 PENGVMAIGSGGSYALSAARA--LMSTQNSAEEIARKA---MSIA 169
                 A G G   A +      L S   + EE  ++A   + IA
Sbjct: 213 WGYYGAATGKGRQAAKAELEKLDLQSGNMTMEEAVKEAARIIYIA 257


>gi|294936022|ref|XP_002781593.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
           50983]
 gi|239892458|gb|EER13388.1| proteasome subunit beta type 2, putative [Perkinsus marinus ATCC
           50983]
          Length = 115

 Score = 38.8 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 23/82 (28%), Gaps = 1/82 (1%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +     V+IA D  V     V              N +   AG  AD+   LE + + +
Sbjct: 7   GIAGKDWVIIAADSHV-EQSIVKFKTTEDKIYEMDNNKLVAAAGPQADSSQFLEFISRNV 65

Query: 80  EQYPNQLLRSSVELAKDWRMDK 101
           E Y           A       
Sbjct: 66  ELYALVNGIQLTTHALASFTRN 87


>gi|311109378|ref|YP_003982231.1| proteasome A-type and B-type family protein [Achromobacter
           xylosoxidans A8]
 gi|310764067|gb|ADP19516.1| proteasome A-type and B-type family protein [Achromobacter
           xylosoxidans A8]
          Length = 287

 Score = 38.8 bits (89), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 55/176 (31%), Gaps = 23/176 (13%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  +  R D  +V   D + + G  Q  +        R G   ++   +G+ A +  +L 
Sbjct: 2   TYCVAARLDSGLVFLADSRTNAGVDQISVFRKMTVFERPGDRVMVLMSSGNLAVSQAVLN 61

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG----MGDVLE 129
            L ++ ++    +  +        R+   +R++      A +   +         G +  
Sbjct: 62  ALARQHDEGGETVWNAPDMFEATRRVGAAVRDVYHREAPALREQGVDFNVNLIFGGQIGT 121

Query: 130 PENGVMAIGSGGSYALSAARALM-----------------STQNSAEEIARKAMSI 168
               +  + S G++  +                           S +E A+ A+  
Sbjct: 122 ERCRLFQVYSAGNFIEAGQECPYFQIGEAKYGKPILDRVLRPDTSLDEAAKCALIS 177


>gi|225704756|gb|ACO08224.1| Proteasome subunit alpha type 2 [Oncorhynchus mykiss]
          Length = 234

 Score = 38.8 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 17/159 (10%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  K 
Sbjct: 38  IKASNGVVLATEKK---QKSILYDETSVHKVEPITKHIGMV-YSGMGPDYRVLLRRARKS 93

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
            +QY           QL++    + +++     +R     +LIA  D+    +       
Sbjct: 94  AQQYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSG 153

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      +     E+    A+
Sbjct: 154 AYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|148665650|gb|EDK98066.1| mCG128699 [Mus musculus]
          Length = 255

 Score = 38.8 bits (89), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/166 (10%), Positives = 50/166 (30%), Gaps = 12/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +++T + +R    VV   +  V L +   + +++++  + +     +AG+   +     +
Sbjct: 33  NSSTAIGIRCKDDVVFGVEK-VVLSKLYEEGSSKRLFNVDRHVAMAVAGWLADARSLAGI 91

Query: 72  LERLEKKLEQ---YPNQLLRSSVELAKDWRMDKYLRNLEAMIL------IADKTITLVIT 122
                        Y   L R +  +A           +            +      +  
Sbjct: 92  AREEASNFRSNFGYNIPLKRLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYM 151

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                +       AIG     A +    L   + +  ++ ++   I
Sbjct: 152 IDPSGVSYGCWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKI 197


>gi|194863690|ref|XP_001970565.1| GG10705 [Drosophila erecta]
 gi|190662432|gb|EDV59624.1| GG10705 [Drosophila erecta]
          Length = 244

 Score = 38.8 bits (89), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 42/161 (26%), Gaps = 10/161 (6%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + ++     V+A   +V+    V +      R     G  + G    S          
Sbjct: 38  TTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRMADSRSQVQKARYE 97

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWRMD-----KYLRNLEAMILIADKTITL-VITGMGD 126
                    Y   +      +A   ++              +++  D  I   V      
Sbjct: 98  AANFRYKYGYDMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGASVYKTDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
                    ++G+    A S          S E+  + A++
Sbjct: 158 GYFSGFKACSVGAKTLEANSYLEKKYKNNLSEEKAIQLAIT 198


>gi|71022749|ref|XP_761604.1| hypothetical protein UM05457.1 [Ustilago maydis 521]
 gi|46101119|gb|EAK86352.1| hypothetical protein UM05457.1 [Ustilago maydis 521]
          Length = 228

 Score = 38.8 bits (89), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/128 (11%), Positives = 36/128 (28%), Gaps = 13/128 (10%)

Query: 54  KGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLE 107
             +I   FAG +ADA  L+++   + + +   +            +A   +       + 
Sbjct: 37  DDHICLAFAGLTADARILIDKARTECQSHRLTVEDPVTVDYITRHVAAIQQKYTQSGGVR 96

Query: 108 AMIL-------IADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +        A+ +   +       +       AIG                  + E+
Sbjct: 97  PFGISTLIIGFDANDSTPKLYQTEPSGMYSAWKANAIGRSSKTVREFLEKNYKDDLTKEQ 156

Query: 161 IARKAMSI 168
             + A+  
Sbjct: 157 TIKLAIKS 164


>gi|118373664|ref|XP_001020025.1| Proteasome subunit alpha type 7-like, putative [Tetrahymena
           thermophila]
 gi|89301792|gb|EAR99780.1| Proteasome subunit alpha type 7-like, putative [Tetrahymena
           thermophila SB210]
          Length = 242

 Score = 38.8 bits (89), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 47/163 (28%), Gaps = 17/163 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +R    +V+  +   +          RKV+RL     I  ++G + DA  L    + +
Sbjct: 33  IGIRGTDCIVMGVEKNPTT-ILQETRTIRKVQRLDDATCIC-YSGLTPDARILTNIAKVE 90

Query: 79  LEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMILIA------DKTITLVITGMGD 126
            + Y             +  +A   +            +         K    +      
Sbjct: 91  CQSYSLNYDDRVPINYIARYIASVQQKYTQKSGARPFGISTLVGGFDSKGQPRLFQTDPS 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
               E   +A+G      +         +  AEE   K + +A
Sbjct: 151 GACTEWKAVALGKHRKTVMENLEKNYQEEYLAEE---KCLELA 190


>gi|209733518|gb|ACI67628.1| Proteasome subunit alpha type-7 [Salmo salar]
          Length = 141

 Score = 38.8 bits (89), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDDH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV 91
           R   + + +   +     
Sbjct: 88  RARVECQSHRLTVEDPVT 105


>gi|154422376|ref|XP_001584200.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121918446|gb|EAY23214.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 240

 Score = 38.8 bits (89), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 45/141 (31%), Gaps = 13/141 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           L V+    +++A +  ++        N R        +I     G   D ++++E+   +
Sbjct: 38  LGVKCKDGILLAAEKNLTSTLLTPGGNPRIFWI--NDSIACATIGHRPDCYSIVEQSRNR 95

Query: 79  LEQYPNQLLRS------SVELAKDWRMDKYLRNLEAMI---LIADKTITLVITGMGDVLE 129
            E + +           + E+++ + +  Y +         + A      +         
Sbjct: 96  AETFTSNFGIKITVPQLASEVSQQFHLAHYYQAYRPFGCTVIFASYKDDALYAIEPSGAF 155

Query: 130 PENGVMAIGSGGSYALSAARA 150
              G  A   G +  L+ A  
Sbjct: 156 --YGYFASCFGKNSNLARAEL 174


>gi|83315114|ref|XP_730653.1| proteasome subunit alpha type 1 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23490442|gb|EAA22218.1| proteasome subunit alpha type 1 [Plasmodium yoelii yoelii]
          Length = 245

 Score = 38.8 bits (89), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 56/168 (33%), Gaps = 20/168 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKAN--ARKVRRLGKGNIIAGFAGSSADAFTLL 72
            T  + ++    VV+ G     L + + K +    K+ ++     +   +G ++DA  L 
Sbjct: 24  GTCAVAIKSKEFVVVCG-----LKKCISKLSYHQEKLFKIDDYIGV-TMSGITSDAKVLT 77

Query: 73  ERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLE-AMILIADKTITLVIT 122
           + +  +   +           +L++   +  +        R     +I+        +  
Sbjct: 78  KYMRNECLTHKFLFDENINIEKLVKKVADKYQKNTQKSSKRAFGVGLIISGYFNEPHIFE 137

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
              +    E   ++ G+    + +     +    ++S +++    +  
Sbjct: 138 TKSNGSYFEYEAISFGARSHASKTYLEKNLHLFEESSLDDLIIHCLKA 185


>gi|157112080|ref|XP_001651784.1| proteasome subunit alpha type [Aedes aegypti]
 gi|108878177|gb|EAT42402.1| proteasome subunit alpha type [Aedes aegypti]
          Length = 233

 Score = 38.4 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 54/161 (33%), Gaps = 17/161 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VVIA + +    ++++    +  KV  +     +  ++G   D   L+++  
Sbjct: 36  VGIKASNGVVIATENK---QKSILYDEHSVHKVEMVTNHIGMI-YSGMGPDYRLLVKQAR 91

Query: 77  KKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMG 125
           K  + Y           QL++    + +++     +R     +LI   D+    +     
Sbjct: 92  KIAQNYYLTYREPIPTSQLVQKIANVMQEYTQSGGVRPFGVSLLICGWDEGRPYLFQCDP 151

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                     A+G       +      S     ++    A+
Sbjct: 152 SGAYFAWKATAMGKNAINGKTFLEKRYSEDLELDDAVHTAI 192


>gi|303313722|ref|XP_003066870.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240106537|gb|EER24725.1| proteasome component, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 295

 Score = 38.4 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    V++A +  VS    ++K  A K       NI    AG   D    + 
Sbjct: 33  NGGTAIGIRCKDGVILAVEKIVS--SRLLKPGANKRIATVDRNIGIVSAGLVPDGRHFVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + N             R+  Y+   +A  L +      V   +G     
Sbjct: 91  RARDEAASWRNTYKAPIPTGVLANRLGGYV---QAYTLYSSVRPFGVTAIVGGWDSE 144


>gi|308456292|ref|XP_003090598.1| CRE-PAS-2 protein [Caenorhabditis remanei]
 gi|308262250|gb|EFP06203.1| CRE-PAS-2 protein [Caenorhabditis remanei]
          Length = 231

 Score = 38.4 bits (88), Expect = 0.43,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 16/160 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLERLE 76
           + +R    VV+A +   S    V+  +  KV ++ K       G             ++ 
Sbjct: 35  VGLRAKDGVVLATENVGS----VLTDDQPKVEQISKHIGCVYSGMGPDFRILVKKARKIA 90

Query: 77  KKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIADKT----ITLVITGMGD 126
            + E    + + +         + +++     +R   + +LIA         L+      
Sbjct: 91  MEYEMMYGEEMPTIQLVTELAAVMQEYTQSGGVRPFGSSLLIAGWDKNPGRPLLFQCDPS 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                    A+G     A +      S     ++    A+
Sbjct: 151 GAYFAWKATALGKNDVNAKTFLEKRFSEALELDDGIHTAL 190


>gi|154278874|ref|XP_001540250.1| proteasome component C1 [Ajellomyces capsulatus NAm1]
 gi|150412193|gb|EDN07580.1| proteasome component C1 [Ajellomyces capsulatus NAm1]
          Length = 426

 Score = 38.4 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S       AN +++  + +   I   +G   D    + 
Sbjct: 162 NGGTSIGIRCKDGVVLAVEKIISSKLLKPGAN-KRIATVDRHIGIV-SSGLLPDGRHFVS 219

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   + + +               R+  Y    +A  L +      V + +G     
Sbjct: 220 RARDEADNWRITYKGPISTHVLASRLGGY---AQAYTLYSSVRPFGVTSIIGGWDSE 273


>gi|209731268|gb|ACI66503.1| Proteasome subunit alpha type-2 [Salmo salar]
 gi|209735344|gb|ACI68541.1| Proteasome subunit alpha type-2 [Salmo salar]
 gi|290561699|gb|ADD38249.1| Proteasome subunit alpha type-2 [Lepeophtheirus salmonis]
          Length = 234

 Score = 38.4 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 17/159 (10%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  K 
Sbjct: 38  IKASNGVVLATEKK---QKSILYDETSVHKVEPITKHIGMV-YSGMGPDYRVLLRRARKL 93

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
            +QY           QL++    + +++     +R     +LIA  D+    +       
Sbjct: 94  AQQYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSG 153

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      +     E+    A+
Sbjct: 154 AYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|299469880|emb|CBN76734.1| similar to 20S proteasome alpha5 subunit [Ectocarpus siliculosus]
          Length = 423

 Score = 38.4 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 34/96 (35%), Gaps = 1/96 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + V+ D  +V+A  G+      +  ++  K+  +  G +    +G   D   LL+
Sbjct: 61  KGGLTIGVQTDKGLVLAAHGRR-RSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLD 119

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM 109
                ++++  +   +    A   ++ +        
Sbjct: 120 YARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGY 155


>gi|320032565|gb|EFW14517.1| proteasome component C1 [Coccidioides posadasii str. Silveira]
          Length = 295

 Score = 38.4 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    V++A +  VS    ++K  A K       NI    AG   D    + 
Sbjct: 33  NGGTAIGIRCKDGVILAVEKIVS--SRLLKPGANKRIATVDRNIGIVSAGLVPDGRHFVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + N             R+  Y+   +A  L +      V   +G     
Sbjct: 91  RARDEAASWRNTYKAPIPTGVLANRLGGYV---QAYTLYSSVRPFGVTAIVGGWDSE 144


>gi|119185089|ref|XP_001243364.1| conserved hypothetical protein [Coccidioides immitis RS]
          Length = 295

 Score = 38.4 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    V++A +  VS    ++K  A K       NI    AG   D    + 
Sbjct: 33  NGGTAIGIRCKDGVILAVEKIVS--SRLLKPGANKRIATVDRNIGIVSAGLVPDGRHFVA 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + N             R+  Y+   +A  L +      V   +G     
Sbjct: 91  RARDEAASWRNTYKAPIPTGVLANRLGGYV---QAYTLYSSVRPFGVTAIVGGWDSE 144


>gi|315425046|dbj|BAJ46719.1| proteasome alpha subunit [Candidatus Caldiarchaeum subterraneum]
          Length = 225

 Score = 38.4 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/163 (9%), Positives = 43/163 (26%), Gaps = 24/163 (14%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-----KGNIIAGFAGSSAD 67
           M     + +R     V+A          ++K   + ++          ++    +G  +D
Sbjct: 29  MRGAISIGLRFPRYAVLAS---------MVKPTRKLMKPSDKVFIVDDHVGVTGSGYISD 79

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL----------IADKTI 117
            + +++ +  + +++      +         +  Y        +            DK  
Sbjct: 80  LYRIVDHMRIEAQRHRLLFDAAVDVGTLVDSVSGYFHGYTLYPVRPQGVAVIIGGVDKLG 139

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               A+G     A+           S +E
Sbjct: 140 VQLYQVDPSGTAFNGDAFALGVNSDKAIDILENEYRPDMSLDE 182


>gi|300120539|emb|CBK20093.2| unnamed protein product [Blastocystis hominis]
          Length = 194

 Score = 38.4 bits (88), Expect = 0.49,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 4/130 (3%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T L V     VVIA +   +L    VM+ + + + ++   +I AG  G S D    +   
Sbjct: 27  TCLGVICKDGVVIASEK--TLDSPFVMEGSDKHIHQI-SQSIGAGIGGYSPDGRYAVGMA 83

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
                Q+ +             RM +++             I L+  G     +  +   
Sbjct: 84  RDHTVQFKDAFGEEMSPRVLAERMGQFVHQFTCYGGARPLGINLLFAGYDHREKKYDLYR 143

Query: 136 AIGSGGSYAL 145
              +G  Y  
Sbjct: 144 ITPTGQYYRH 153


>gi|209737372|gb|ACI69555.1| Proteasome subunit alpha type-2 [Salmo salar]
          Length = 234

 Score = 38.4 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 17/159 (10%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  K 
Sbjct: 38  IKASNGVVLATEKK---QKSILYDETSVHKVEPITKHVGMV-YSGMGPDYRVLLRRARKL 93

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
            +QY           QL++    + +++     +R     +LIA  D+    +       
Sbjct: 94  AQQYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSG 153

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      +     E+    A+
Sbjct: 154 AYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|71411717|ref|XP_808096.1| proteasome alpha 3 subunit [Trypanosoma cruzi strain CL Brener]
 gi|70872228|gb|EAN86245.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi]
          Length = 286

 Score = 38.4 bits (88), Expect = 0.50,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 46/165 (27%), Gaps = 21/165 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK---------GNIIAGFAGSS 65
           A T++ +   G VV+  +  V         N       G+         G  +AG    +
Sbjct: 31  AGTVIGILTTGGVVLGAEKGV-QNSLFDSENMEDKNISGEKLYKIASHIGCSVAGVTSDA 89

Query: 66  ADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA---------MILIADKT 116
                    L      Y  Q   ++ +L +    +K L              ++   D+ 
Sbjct: 90  YALLNYAR-LSASRHHYTYQEPMAAEDLCRLLCDEKQLYTQYGGVRPFGVSFLLAGWDRH 148

Query: 117 ITL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
               +               AIG     A S  +    ++ + +E
Sbjct: 149 HGYQLYHTDTSGNYNAWRAYAIGQNDQVAQSLLKRDWRSELTLDE 193


>gi|294894894|ref|XP_002775005.1| proteasome subunit alpha1, putative [Perkinsus marinus ATCC 50983]
 gi|239880788|gb|EER06821.1| proteasome subunit alpha1, putative [Perkinsus marinus ATCC 50983]
          Length = 250

 Score = 38.4 bits (88), Expect = 0.51,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 51/179 (28%), Gaps = 18/179 (10%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
             AVK    T L ++    VV  G  ++              R     G +IAG    + 
Sbjct: 27  FKAVKTSGLTCLAMKGKNTVVAVGQKKIPDKLQDGSFTNSIYRITSNLGVVIAGMPADAR 86

Query: 67  DAFTLLERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEA---MILIADKTI 117
                  +   + E         + L +    LA+ +    Y+R          I D+  
Sbjct: 87  ALVNRARQTASEYEDKNGCEIPCHYLAKKIANLAQVYTQHAYMRPYGVIALFFGIDDEFG 146

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN--------SAEEIARKAMSI 168
             ++              A G+    A +A   ++  +            E   +A++ 
Sbjct: 147 PQLLKVDPAGHYVGCKAAAAGTKEQEATNALEKIVRKRMDTGVPEGSDETETVEEAIAA 205


>gi|315426586|dbj|BAJ48215.1| 20S proteasome alpha subunit [Candidatus Caldiarchaeum
           subterraneum]
          Length = 229

 Score = 38.4 bits (88), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/163 (9%), Positives = 43/163 (26%), Gaps = 24/163 (14%)

Query: 13  MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLG-----KGNIIAGFAGSSAD 67
           M     + +R     V+A          ++K   + ++          ++    +G  +D
Sbjct: 29  MRGAISIGLRFPRYAVLAS---------MVKPTRKLMKPSDKVFIVDDHVGVTGSGYISD 79

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL----------IADKTI 117
            + +++ +  + +++      +         +  Y        +            DK  
Sbjct: 80  LYRIVDHMRIEAQRHRLLFDAAVDVGTLVDSVSGYFHGYTLYPVRPQGVAVIIGGVDKLG 139

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
             +               A+G     A+           S +E
Sbjct: 140 VQLYQVDPSGTAFNGDAFALGVNSDKAIDILENEYRPDMSLDE 182


>gi|207724136|ref|YP_002254534.1| peptidase t1a (partial sequence n terminus) protein [Ralstonia
          solanacearum MolK2]
 gi|206589345|emb|CAQ36307.1| putative peptidase t1a (partial sequence n terminus) protein
          [Ralstonia solanacearum MolK2]
          Length = 39

 Score = 38.4 bits (88), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL 52
          TT + V+K G V IA D  V+ G T +     + +++
Sbjct: 2  TTCVVVKKGGEVAIAADSLVTFGDTRLARGYEQNQKI 38


>gi|159489306|ref|XP_001702638.1| 20S proteasome alpha subunit C [Chlamydomonas reinhardtii]
 gi|158280660|gb|EDP06417.1| 20S proteasome alpha subunit C [Chlamydomonas reinhardtii]
          Length = 253

 Score = 38.4 bits (88), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 44/161 (27%), Gaps = 14/161 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLG----QTVMKANARKVRRLGK-GNIIAGFAGSSADA 68
           +A   + +     VV+  + +++        V     +  R        +AG    +   
Sbjct: 30  NAGASIGLLAKDGVVLIAEKKITSKLLDTHAVGVRREKMYRIDNHIACSVAGITADANIL 89

Query: 69  FTLLERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--- 119
                   ++            QL+R+  +  + +      R     +L A         
Sbjct: 90  INTCRLAAQRYLFAYQEPMPVEQLVRTVCDTKQGYTQFGGQRPFGVSLLYAGWDEHYGFQ 149

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           +              +AIG+G   A +  ++         E
Sbjct: 150 LYQSDPSGNYGGWKAVAIGAGHQAANNLLKSDFKEDLPLSE 190


>gi|189205429|ref|XP_001939049.1| proteasome subunit alpha type-3 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187975142|gb|EDU41768.1| proteasome subunit alpha type-3 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 290

 Score = 38.4 bits (88), Expect = 0.54,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 53/195 (27%), Gaps = 42/195 (21%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG---------FAGS 64
           +  T + ++    VV+A +  +S       AN +++  + +   I           F   
Sbjct: 33  NGGTAVGIKCKDGVVLALEKLISSKLLKPGAN-KRIATVDRNMGIVSSGLLPDGRHFVSR 91

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI------- 117
           + D      +L  K     + L       A+ + +   +R      +IA           
Sbjct: 92  ARDEAAQWRQL-YKAPIPSSSLADRMGSYAQAYTLYSSVRPFGITAIIAGWDSEAELPVD 150

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARA--LMS 153
                                   +       L       A G G   A S      L  
Sbjct: 151 GQVGSGPGVGSGGKKEGAKHGGPSLYMIEPSGLYWGYYGAATGKGRQVAKSELEKLNLAE 210

Query: 154 TQNSAEEIARKAMSI 168
            + S EE  ++A  I
Sbjct: 211 GKLSLEEGVKEAARI 225


>gi|330925829|ref|XP_003301213.1| hypothetical protein PTT_12659 [Pyrenophora teres f. teres 0-1]
 gi|311324274|gb|EFQ90700.1| hypothetical protein PTT_12659 [Pyrenophora teres f. teres 0-1]
          Length = 296

 Score = 38.4 bits (88), Expect = 0.54,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 53/195 (27%), Gaps = 42/195 (21%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAG---------FAGS 64
           +  T + ++    VV+A +  +S       AN +++  + +   I           F   
Sbjct: 39  NGGTAVGIKCKDGVVLALEKLISSKLLKPGAN-KRIATVDRNMGIVSSGLLPDGRHFVSR 97

Query: 65  SADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI------- 117
           + D      +L  K     + L       A+ + +   +R      +IA           
Sbjct: 98  ARDEAAQWRQL-YKAPIPSSSLADRMGSYAQAYTLYSSVRPFGITAIIAGWDSEAELPVD 156

Query: 118 ----------------------TLVITGMGDVLEPENGVMAIGSGGSYALSAARA--LMS 153
                                   +       L       A G G   A S      L  
Sbjct: 157 GQVGSGPGVGSGGKKEGAKHGGPSLYMIEPSGLYWGYYGAATGKGRQVAKSELEKLNLAE 216

Query: 154 TQNSAEEIARKAMSI 168
            + S EE  ++A  I
Sbjct: 217 GKLSLEEGVKEAARI 231


>gi|119595805|gb|EAW75399.1| hCG41772, isoform CRA_c [Homo sapiens]
 gi|119595806|gb|EAW75400.1| hCG41772, isoform CRA_c [Homo sapiens]
          Length = 166

 Score = 38.4 bits (88), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV 91
           R   + + +   +     
Sbjct: 86  RARVECQSHRLTVEDPVT 103


>gi|12584835|gb|AAG59850.1| 20S proteasome alpha subunit 4 [Giardia intestinalis]
          Length = 133

 Score = 38.0 bits (87), Expect = 0.56,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 13/130 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             T+ + VR    +V+A + + +  +      ++K+  +    IIA FAG +ADA  L++
Sbjct: 6   RGTSAVAVRSAAGIVLAIERKQTA-RLQDPRASQKIFDVDDH-IIATFAGLTADARVLID 63

Query: 74  RLEKKLEQYPNQLLRSSV--ELAKD---------WRMDKYLRNLEAMILIADKTITLVIT 122
           R   + + Y      +     +AK           R       +  ++   D   + V  
Sbjct: 64  RARLECQAYRMTYDVAPSVEIIAKAVASILQSHTHRGGTRPFGVSIILAGNDLNGSHVFM 123

Query: 123 GMGDVLEPEN 132
                +  E 
Sbjct: 124 CDPSGVYTEW 133


>gi|154339648|ref|XP_001565781.1| proteasome alpha 7 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063099|emb|CAM45297.1| putative proteasome alpha 7 subunit [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 238

 Score = 38.0 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T +       VV+A +   S  + +   +  ++  + +   I    G   D   ++ 
Sbjct: 33  NSSTAVAACCKDGVVVAVEKIHSS-RMLESGSNNRIHAVDRQAGIC-ICGLLPDGRAIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   + E   +             R+ +++               A+I         +  
Sbjct: 91  RARLEAENSRDIFSTPIHGAVLANRVGEFMHAYTTHFAYRPFGCSAIIASYADDGPQLFV 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIA 162
                       +A+G   + A S    L     + EE  
Sbjct: 151 SDPSGTVAGYYGIALGKAKTVAKSELEKLNFASLTCEEAV 190


>gi|261855909|ref|YP_003263192.1| 20S proteasome, A and subunit betas [Halothiobacillus neapolitanus
           c2]
 gi|261836378|gb|ACX96145.1| 20S proteasome, A and B subunits [Halothiobacillus neapolitanus c2]
          Length = 267

 Score = 38.0 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 48/139 (34%), Gaps = 7/139 (5%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG-QTVMK-ANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  + ++ +  +V A D + + G   +      R     G   I+   +G+ +     + 
Sbjct: 2   TYCVALKLNAGLVFASDSRTNAGIDQISSFKKMRTFVNRGDRVIVILSSGNLSITQNAIN 61

Query: 74  RLEKKLEQ-YPNQLLRSSVELAKDWRMDKYLRNL----EAMILIADKTITLVITGMGDVL 128
           +LE +        +  ++        +   LR++       ++  +  ++      G + 
Sbjct: 62  QLETQGRSPEQQNIWNATSMFDVASLLGGCLRHVQNTDRPFLMAGNIDVSANFIVGGQIA 121

Query: 129 EPENGVMAIGSGGSYALSA 147
                +  + S G++  + 
Sbjct: 122 GEPPRLFLVYSEGNFIEAT 140


>gi|149463382|ref|XP_001520474.1| PREDICTED: similar to proteasome subunit beta-type [Ornithorhynchus
           anatinus]
          Length = 66

 Score = 38.0 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 13/31 (41%)

Query: 158 AEEIARKAMSIAADICVYTNHNIVLETLKVG 188
           A ++ +     AA+  VYT   + +  +   
Sbjct: 24  ALQLVKDVFISAAERDVYTGDALKICIVTKD 54


>gi|302764226|ref|XP_002965534.1| hypothetical protein SELMODRAFT_406982 [Selaginella moellendorffii]
 gi|300166348|gb|EFJ32954.1| hypothetical protein SELMODRAFT_406982 [Selaginella moellendorffii]
          Length = 557

 Score = 38.0 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 68/200 (34%), Gaps = 28/200 (14%)

Query: 7   KHYAVKMHATTILTVRKDGVVVIAGDGQVSL----GQTVMKA-NARKVRRLGKGNII-AG 60
           +H     H T  L V      ++  D   ++    G  V K  N +K+  +     +  G
Sbjct: 206 QHRQRSQHGTIGLAVFCKQGFIVLFDSLTTVTGDDGGVVEKRGNFKKIVEVRSEPRLRVG 265

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLV 120
           FAG+ A +  +++ L+ KL +    L  ++  L K   +                   LV
Sbjct: 266 FAGNVAASLQVIKLLQVKLSRKELTLHEAAEFLTKKAGLYATTDPDFVASFFVYNESMLV 325

Query: 121 I---TGMGDVLEP---ENGVMAIGSGGSYALSAARALMSTQN--------SAEEIARKAM 166
           +    G G        E+ VMAIGSG   A       +  QN         A  +   A 
Sbjct: 326 MVKNDGNGYKTTEVTNEHSVMAIGSGAQQAQVILGQPVRGQNHGKEASVGEALSLGLDAF 385

Query: 167 SIA--------ADICVYTNH 178
           + A         D+CV    
Sbjct: 386 AQACIENPECGGDLCVIDGS 405


>gi|195174599|ref|XP_002028060.1| GL19724 [Drosophila persimilis]
 gi|194115791|gb|EDW37834.1| GL19724 [Drosophila persimilis]
          Length = 252

 Score = 38.0 bits (87), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/167 (10%), Positives = 46/167 (27%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTL 71
             +T + +     VVI    + +  + +       V  +    G   +G +G        
Sbjct: 30  KGSTSVGIVASEGVVIGTATRKTS-ELMEPRGMPHVAPINTMIGMAYSGLSGDFRILKNH 88

Query: 72  LERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITG 123
            +R   +         ++   +  +A   +    + +     +       DK +  +   
Sbjct: 89  AQRCSIQNNLSNGSAVKVKEVAHCMAILMQEYTQMASARPFGVSLLIAGCDKGVPHLYDC 148

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +        +A+G       S      +       A + A  A+ 
Sbjct: 149 SANGTHSNRKAIALGRNAGICTSFLENRFTESLKIEDAIDTALLALK 195


>gi|268558382|ref|XP_002637181.1| C. briggsae CBR-PAS-2 protein [Caenorhabditis briggsae]
 gi|187031629|emb|CAP28928.1| CBR-PAS-2 protein [Caenorhabditis briggsae AF16]
          Length = 231

 Score = 38.0 bits (87), Expect = 0.60,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 32/172 (18%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLERLE 76
           + +R    VV+A +   S    V+  +  KV ++ K       G             ++ 
Sbjct: 35  VGLRAKDGVVLATENVGS----VLTDDQPKVEQISKHIGCVYSGMGPDFRILVKKARKIA 90

Query: 77  KKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIADKT----ITLVITGMGD 126
            + E    + + +         + +++     +R   A +LIA         L+      
Sbjct: 91  MEYEMMYGEEMPTIQLVTELAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDP- 149

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC--VYT 176
                         G+Y    A AL     +A+    K  + A ++   ++T
Sbjct: 150 -------------SGAYFAWKATALGKNDVNAKTFLEKRFTEALELDDGIHT 188


>gi|322492836|emb|CBZ28114.1| putative proteasome alpha 7 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 238

 Score = 38.0 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 54/166 (32%), Gaps = 13/166 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T +       VV+A +   +  + + K +  ++  + +   I    G   D   ++ 
Sbjct: 33  NSSTAVAACCKDGVVVAVEKIHTS-RMLEKGSNNRIHAVDRQAGIC-ICGLLPDGRAIIS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++ E   +             R+ +++               A+I         +  
Sbjct: 91  RARQEAENSRDIFATPIRGAVLANRVGEFMHVYTTHFAYRPFGCSAIIASYADDGPQLFV 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                       +A+G   + A S    L  +  + E+   K +SI
Sbjct: 151 SDPSGTVAGYYGVALGKAKTVAKSELEKLDFSSLTCEDAVGKLVSI 196


>gi|117558331|gb|AAI27467.1| Psma7 protein [Rattus norvegicus]
          Length = 174

 Score = 38.0 bits (87), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV 91
           R   + + +   +     
Sbjct: 86  RARVECQSHRLTVEDPVT 103


>gi|9623020|gb|AAF90007.1| 20S proteasome alpha 3 subunit [Acanthamoeba castellanii]
          Length = 104

 Score = 38.0 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL-L 72
           HA   + +     VV+A + +++         + K+ R+      A    ++     L  
Sbjct: 6   HAGAAVGILGKDGVVLACEKKIASKLLEPGKRSEKMYRIDDHIACAVAGITADANILLNF 65

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
            RL  +   +  Q      +L +     K        +
Sbjct: 66  SRLAAQRYLFAYQEPVPVEQLVQQVCDTKQGYTQYGGL 103


>gi|225712012|gb|ACO11852.1| Proteasome subunit alpha type-2 [Lepeophtheirus salmonis]
 gi|290562551|gb|ADD38671.1| Proteasome subunit alpha type-2 [Lepeophtheirus salmonis]
          Length = 237

 Score = 38.0 bits (87), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 15/165 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + ++    VV+A + +        + +  K+  +        ++G   D   L+ +
Sbjct: 32  GAASVGIKASNGVVLATEKKHKS-SLHEEHSIHKIEEISSNIG-MTYSGMGPDYRLLVRK 89

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIADKT----ITLVI 121
             K  E+Y           QL+    ++ +++     +R     +LIA          + 
Sbjct: 90  ARKMSEEYTMIYGEKIPTSQLVARVADVMQEYTHSGGVRPFGVSLLIAGWDEEANKPYLF 149

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                         A+G+      +            E+    A+
Sbjct: 150 QCDPSGAYFAWKATAMGNNFVNGKTFLEKRYDDSVELEDAVHTAI 194


>gi|70946556|ref|XP_742981.1| Proteosome subunit alpha type 1 [Plasmodium chabaudi chabaudi]
 gi|56522254|emb|CAH77118.1| Proteosome subunit alpha type 1, putative [Plasmodium chabaudi
           chabaudi]
          Length = 253

 Score = 38.0 bits (87), Expect = 0.70,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 56/168 (33%), Gaps = 20/168 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKAN--ARKVRRLGKGNIIAGFAGSSADAFTLL 72
            T  + ++    VV+ G     L + + K +    K+ ++     +   +G ++DA  L 
Sbjct: 32  GTCAVAIKSKEFVVVCG-----LKKCISKLSYHQEKLFKIDDYIGV-TMSGITSDAKVLT 85

Query: 73  ERLEKKLEQYP---------NQLLRSSVELAKDWRMDKYLRNLE-AMILIADKTITLVIT 122
           + +  +   +           +L++   +  +        R     +I+        +  
Sbjct: 86  KYMRNECLTHKFLFDENINVEKLVKKVADKYQKNTQKSSKRAFGVGLIISGYFNEPHIFE 145

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
              +    E   ++ G+    + +     +    ++S +++    +  
Sbjct: 146 TKSNGSYFEYEALSFGARSHASKTYLEKNLHLFEESSLDDLIIHCLKA 193


>gi|195162101|ref|XP_002021894.1| GL14346 [Drosophila persimilis]
 gi|194103792|gb|EDW25835.1| GL14346 [Drosophila persimilis]
          Length = 265

 Score = 38.0 bits (87), Expect = 0.70,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 51/174 (29%), Gaps = 19/174 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + +R +  VV+A +  ++  + +      ++  +     +A   G   D + L E
Sbjct: 33  NSGTAVGIRSESSVVLAVEN-LTGNRYISPDTYPRLFVIDGHFGMA-VHGLRGDVYALAE 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL------------IADKTITLVI 121
               +         R          + K ++                      +    + 
Sbjct: 91  NARFEASLVRRTSERGITMKELCDHLSKIVKLCFQHNAARPYAVSILLSGWELQHGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                     +   AIG G   AL+            EE+ + +     +I +Y
Sbjct: 151 KVEPSGAVVSHASCAIGVGEEKALALMEKYKFDAFDMEELVKMS----GEI-IY 199


>gi|198472289|ref|XP_002133001.1| GA28947 [Drosophila pseudoobscura pseudoobscura]
 gi|198138948|gb|EDY70403.1| GA28947 [Drosophila pseudoobscura pseudoobscura]
          Length = 252

 Score = 38.0 bits (87), Expect = 0.71,   Method: Composition-based stats.
 Identities = 18/167 (10%), Positives = 46/167 (27%), Gaps = 14/167 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTL 71
             +T + +     VVI    + +  + +       V  +     +A  G +G        
Sbjct: 30  KGSTSVGIVASEGVVIGTATRKTS-ELMEPRGMPHVAPINTMIGMAYSGLSGDFRILKNH 88

Query: 72  LERLEKKLEQYPN---QLLRSSVELAKDWRMDKYLRNLEAMILI-----ADKTITLVITG 123
            +R   +         ++   +  +A   +    + +     +       DK +  +   
Sbjct: 89  AQRCSIQNNLSNGSAVKVKEVAHCMAILMQEYTQMASARPFGVSLLIAGCDKGVPHLYDC 148

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMS 167
             +        +A+G       S      +       A + A  A+ 
Sbjct: 149 SANGTHSNRKAIALGRNAGICTSFLENRFTESLKIEDAIDTALLALK 195


>gi|37778980|gb|AAP20150.1| alpha 4 subunit of 20S proteasome [Pagrus major]
          Length = 158

 Score = 38.0 bits (87), Expect = 0.71,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 11/131 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD- 126
           R   + + +   +            +A   +            + A         G    
Sbjct: 88  RARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIV-GFDYDGTPRL 146

Query: 127 -VLEPENGVMA 136
              +P     A
Sbjct: 147 YQTDPSGTYHA 157


>gi|89266489|gb|ABD65537.1| proteasome subunit alpha type 7 [Ictalurus punctatus]
          Length = 154

 Score = 37.7 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L +  +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGKDIVVLGVEKK-SVAKLQEERTVRKICALDEH-VCMAFAGLTADARIVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV 91
           R   + + +   +     
Sbjct: 88  RARVECQSHRLTVEDPVT 105


>gi|242060402|ref|XP_002451490.1| hypothetical protein SORBIDRAFT_04g002770 [Sorghum bicolor]
 gi|241931321|gb|EES04466.1| hypothetical protein SORBIDRAFT_04g002770 [Sorghum bicolor]
          Length = 270

 Score = 37.7 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 52/168 (30%), Gaps = 19/168 (11%)

Query: 15  ATTILTVRKDGVVVIAGDGQ-VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
            +  + +      V+A   +  S     + +  RKV R+ +   +A  AG +AD   L  
Sbjct: 32  GSACVGLCSRTHAVLAAVNKPASE----LSSYQRKVFRVAEHAGVA-LAGLTADGRVLSR 86

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD-----------KYLRNLEAMILIADKTITLVIT 122
            L  +   +               ++            K    +  ++   D++   +  
Sbjct: 87  FLRNECINHSFVYEAPLPISRLALKLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYY 146

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
                   E    AIGS    A +            + E++ + A+S 
Sbjct: 147 NCPSGNYFEYQAFAIGSRSQAAKTFLERRFQGYKDYTPEQLIKDALSA 194


>gi|194697116|gb|ACF82642.1| unknown [Zea mays]
          Length = 238

 Score = 37.7 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 14/140 (10%)

Query: 42  MKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD- 100
           + +  RKV R+     +A  AG +AD   L   L  +   +               ++  
Sbjct: 20  LSSYQRKVFRVADHAGVA-LAGLTADGRVLSRFLRNECINHSFVYEAPLPVSRLALKLAD 78

Query: 101 ----------KYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARA 150
                     K    +  ++   D++   +          E    AIGS    A +    
Sbjct: 79  KAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLER 138

Query: 151 LMS--TQNSAEEIARKAMSI 168
                   + E++ + A+S 
Sbjct: 139 RFQGYNDYTPEQLIKDALSA 158


>gi|32128463|ref|NP_858998.1| putative peptidase of the HslV family [Xanthomonas phage Xp10]
 gi|31788526|gb|AAP58718.1| 50L [Xanthomonas phage Xp10]
          Length = 144

 Score = 37.7 bits (86), Expect = 0.76,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 29/157 (18%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           ++  DG   +A D QV+ G    K    K RRL  G +I            + + L+ + 
Sbjct: 3   SIAFDGKS-LACDSQVTSGSL--KGRMDKFRRLPGGGVIIVAGEVELIDQAVQDFLDGEP 59

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGS 139
            +         +E A+  R+D+                     G  +   P +   AIGS
Sbjct: 60  PETLRDADG--MERAQFVRLDR-------------SGCWYTSDGTWNKFYPGD---AIGS 101

Query: 140 GGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
           G +YA++A    +         A+KA+ +A D+ +Y+
Sbjct: 102 GAAYAITAMHLGLD--------AKKAVMVACDLDLYS 130


>gi|268559676|ref|XP_002637829.1| C. briggsae CBR-PAS-1 protein [Caenorhabditis briggsae]
 gi|187035407|emb|CAP25288.1| CBR-PAS-1 protein [Caenorhabditis briggsae AF16]
          Length = 246

 Score = 37.7 bits (86), Expect = 0.77,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 46/178 (25%), Gaps = 17/178 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL- 75
           T + V+     VIA   +V     ++      V ++ +              F +     
Sbjct: 38  TAVAVKGVDTAVIAIQKRV-PDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQVKRAQG 96

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA----------MILIADKTITLVITGMG 125
           E    +Y N        LAK            A           I   D+    V     
Sbjct: 97  EAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDP 156

Query: 126 DVLEPENGVMAIGSGGSYALSAARA--LMSTQN---SAEEIARKAMSIAADICVYTNH 178
                    +++G     A S          +       E+A +A+  +  I V +  
Sbjct: 157 AGYYRGMKGVSVGVKQVPATSFLEKKIKKKPEMNSTETIELAIEALQNSLGIDVRSKD 214


>gi|73544157|ref|XP_847973.1| proteasome alpha 7 subunit [Leishmania major strain Friedlin]
 gi|321438327|emb|CBZ12079.1| putative proteasome alpha 7 subunit [Leishmania major strain
           Friedlin]
          Length = 238

 Score = 37.7 bits (86), Expect = 0.77,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 51/162 (31%), Gaps = 13/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T +       VV+A +   +  + + K +  ++  + +   I    G   D   ++ 
Sbjct: 33  NSSTAVAACCKDGVVVAVEKIHTS-RMLEKGSNNRIHAVDRQAGIC-ICGLLPDGRAIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++ E   +             R+ +++               A+I         +  
Sbjct: 91  RARQEAENSRDIFATPIRGSVLANRVGEFMHVYTTHFAYRPFGCSAIIASYADDGPQLFV 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                       +A+G   + A S    L  +  + ++   K
Sbjct: 151 SDPSGTVAGYYGVALGKAKTVAKSELEKLDFSNLTCDDAVVK 192


>gi|225705424|gb|ACO08558.1| Proteasome subunit alpha type 2 [Oncorhynchus mykiss]
          Length = 234

 Score = 37.7 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 17/159 (10%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  K 
Sbjct: 38  IKASNGVVLATEKK---QKSILYDETSVHKVEPITKHIGMV-YSGMGPDYRVLLRRARKL 93

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
            +QY           QL++    + +++     +R     +LIA  D+    +       
Sbjct: 94  AQQYFLVYQEPIPTAQLVQGVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSG 153

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      +     E+    A+
Sbjct: 154 AYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|198470843|ref|XP_002133589.1| GA22984 [Drosophila pseudoobscura pseudoobscura]
 gi|198145646|gb|EDY72217.1| GA22984 [Drosophila pseudoobscura pseudoobscura]
          Length = 265

 Score = 37.7 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 54/174 (31%), Gaps = 19/174 (10%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           ++ T + +R +  VV+A +  ++  + +      ++  +     +A   G   D + L E
Sbjct: 33  NSGTAVGIRSESSVVLAVEN-LTGNRYISPDTYPRLFVIDGHFGMA-VHGLRGDVYALAE 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNLEAMILIADKT---ITLVI 121
               +         R          + K +         R     IL++         + 
Sbjct: 91  NARFEASLVRRTSERGITMKELCDHLSKIVKLCFQHNDARPYAVSILLSGWELQHGPQLY 150

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVY 175
                     +   AIG G   AL+            EE+ + +     +I +Y
Sbjct: 151 KVEPSGAVVSHASCAIGVGEEKALALMEKYKFDAFDMEELVKMS----GEI-IY 199


>gi|312132004|ref|YP_003999344.1| 20S proteasome a and b subunits [Leadbetterella byssophila DSM
           17132]
 gi|311908550|gb|ADQ18991.1| 20S proteasome A and B subunits [Leadbetterella byssophila DSM
           17132]
          Length = 242

 Score = 37.7 bits (86), Expect = 0.80,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 53/168 (31%), Gaps = 21/168 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T  L V+    +V   D +++ G  V       + ++   ++    AG  +     +   
Sbjct: 2   TFCLGVKTADGLVALADRRITSGSEVSSEKKVSIHQIQNHSLFIMTAGLRSVRDKAITYF 61

Query: 76  EKKLEQ---YPNQLLRSSVELAKDWR--------------MDKYLRNLEAMILIADKTIT 118
           ++ LE       +L ++   L    +              +   L  +    L  DK   
Sbjct: 62  QEVLEDDTAQFEKLYQAVNSLGAKIKKVREEDEAILLKSGLSFNLSAIIGGQLEKDKEHK 121

Query: 119 -LVITGMGDVLE--PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
             ++   G+ +E    +  + IG    Y        M      +E+ R
Sbjct: 122 LFLLYPEGNWIEVSEGSPFIIIG-NSGYGKPILYRNMKYTTPLDEVLR 168


>gi|72549825|ref|XP_843589.1| proteasome alpha 1 subunit [Leishmania major strain Friedlin]
 gi|323364108|emb|CBZ13115.1| putative proteasome alpha 1 subunit [Leishmania major strain
           Friedlin]
          Length = 250

 Score = 37.7 bits (86), Expect = 0.80,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 52/178 (29%), Gaps = 26/178 (14%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
            + +R    V++A   Q  +   +M+ ++  +       I     G + D   L++R  +
Sbjct: 36  TVAIRCKDAVLVA--TQHVIPDRLMRPDSVTMLYEVTPGIGCCMTGRAPDGRALVQRARE 93

Query: 78  KLEQYPNQLLRSSVELAKDWRMD-----------KYLRNLEAMILIADKTI------TLV 120
           +   Y  +            RM                 + +  +  D++         +
Sbjct: 94  EASDYHYRYGVQIPIAVLAKRMGDKAQVRTQQAGLRPMGVVSTFIGMDQSDQDGALKPQI 153

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-------TQNSAEEIARKAMSIAAD 171
            T         +   A+G     A++              TQ  A  IA  A+  A  
Sbjct: 154 YTVDPAGWTCGHIACAVGKKQVEAMAFLEKRQKSTEFAELTQKEAAMIALAALQSAIG 211


>gi|198455239|ref|XP_002138029.1| GA26178 [Drosophila pseudoobscura pseudoobscura]
 gi|198133158|gb|EDY68587.1| GA26178 [Drosophila pseudoobscura pseudoobscura]
          Length = 248

 Score = 37.7 bits (86), Expect = 0.82,   Method: Composition-based stats.
 Identities = 18/173 (10%), Positives = 52/173 (30%), Gaps = 18/173 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           T + ++     V+A   +++  +T++  + + + R+         G  G S         
Sbjct: 36  TTVALKTKNAAVLATQKRIT-DKTIVPRSVKHLFRITPKIGCCMTGRIGDSHFQVRRSRN 94

Query: 75  LEKKLEQYPNQLLRS---SVELAKDWRMDKYLRNLEAM-----ILIADKT-ITLVITGMG 125
              K        + +      +A   ++      +  +     ++  D+     +     
Sbjct: 95  EASKFRYTCGYDVTAKALCERMADINQVYSQHPEIRPLGCSMILIEYDEKLGPTLHMTDP 154

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMS------TQNSAEEIARKAMSIAADI 172
                      +G     A +   A +       ++  A ++A + +    DI
Sbjct: 155 GADCNSYKGCGLGPQADRAEAFLAAHLKGGTRNMSEEKAIQLALECLGTVLDI 207


>gi|257205830|emb|CAX82566.1| 20S proteasome subunit beta 3 [Schistosoma japonicum]
          Length = 98

 Score = 37.7 bits (86), Expect = 0.84,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
          + + ++ +       IA D +  +    +  +  KV  LG    + GF G + D  T+ 
Sbjct: 7  NGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYV-GFPGLATDNQTVY 64


>gi|294898608|ref|XP_002776299.1| proteasome subunit alpha1, putative [Perkinsus marinus ATCC 50983]
 gi|239883209|gb|EER08115.1| proteasome subunit alpha1, putative [Perkinsus marinus ATCC 50983]
          Length = 250

 Score = 37.7 bits (86), Expect = 0.84,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 50/179 (27%), Gaps = 18/179 (10%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSA 66
             AVK    T L ++    VV  G  ++              R     G +IAG      
Sbjct: 27  FKAVKTSGLTCLAMKGKNTVVAVGQKKIPDKLQDGSFTNSIYRITSNLGVVIAGMPADVR 86

Query: 67  DAFTLLERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEA---MILIADKTI 117
                  +   + E         + L +    LA+ +    Y+R          I D+  
Sbjct: 87  ALVNRARQTASEYEDKNGCEIPCHYLAKKIANLAQVYTQHAYMRPYGVIALFFGIDDEFG 146

Query: 118 TLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN--------SAEEIARKAMSI 168
             ++              A G+    A +A   ++  +            E   +A++ 
Sbjct: 147 PQLLKVDPAGHYVGCKAAAAGTKEQEATNALEKIVRKRMDTGVPEGSDETETVEEAIAA 205


>gi|170077090|ref|YP_001733728.1| hypothetical protein SYNPCC7002_A0464 [Synechococcus sp. PCC 7002]
 gi|169884759|gb|ACA98472.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 260

 Score = 37.7 bits (86), Expect = 0.85,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 26/176 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLE 73
           T  L +      ++A D + + G   + +  +       G   +I   +G+ +    +  
Sbjct: 2   TYCLGILVRQGFILAADSRTNAGVDYVSSYQKLFDFSCPGERVLILCTSGNLSITQAITY 61

Query: 74  RLEKKLE-----------------QYPNQLLRSSVELAKDW----RMDKYLRNLEAMILI 112
           +LE+++                  +Y  Q  R   +  + W     +D     L A  + 
Sbjct: 62  QLEQEIRSGTPHNLHTIPSLYDAARYIGQKTRQLQQEDRPWLEKDHIDFQCNFLLAGQIA 121

Query: 113 ADKTITLVITGMGDVLE--PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  +I   G+ +   PE   + IG    Y        +S ++S + IA+ A+
Sbjct: 122 GAPPELFLIYSQGNCIRATPETPYLQIGETK-YGKPILDRTLSYESSLDAIAKSAL 176


>gi|332862105|ref|XP_001145865.2| PREDICTED: proteasome subunit alpha type-5-like, partial [Pan
          troglodytes]
          Length = 126

 Score = 37.7 bits (86), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
           +T + ++    V +A + +++    +  ++  K+  +      A  +G  ADA TL+++
Sbjct: 7  GSTAIGIQTSEGVCLAVEKRITS-PLMEPSSIEKIVEIDAHIGCA-MSGLIADAKTLIDK 64

Query: 75 LEKKLEQYPNQLLRSSV 91
             + + +      +  
Sbjct: 65 ARVETQNHWFTYNETMT 81


>gi|116789186|gb|ABK25150.1| unknown [Picea sitchensis]
          Length = 69

 Score = 37.7 bits (86), Expect = 0.89,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKV 49
          H  TI+ V  +G  V+  D +   G  V    + K+
Sbjct: 34 HG-TIVGVTYNGGTVLRADSRTGTGMYVANGASDKI 68


>gi|56204042|emb|CAI18837.1| proteasome (prosome, macropain) subunit, alpha type, 7 [Homo
           sapiens]
          Length = 149

 Score = 37.7 bits (86), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 28  KGSTAVGVRGRDIVVLGVEKK-SVAKLQDERTVRKICALDDN-VCMAFAGLTADARIVIN 85

Query: 74  RLEKKLEQYPNQLLRSSV 91
           R   + + +   +     
Sbjct: 86  RARVECQSHRLTVEDPVT 103


>gi|209731336|gb|ACI66537.1| Proteasome subunit alpha type-2 [Salmo salar]
          Length = 234

 Score = 37.7 bits (86), Expect = 0.91,   Method: Composition-based stats.
 Identities = 17/157 (10%), Positives = 43/157 (27%), Gaps = 9/157 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERLEK 77
           + ++    VV+A + +         +  +        G + +G             +L +
Sbjct: 36  VGIKASNGVVLATEKKQKSILYDETSVHKVEMITKHIGMVYSGMGPDYRVLLRRARKLAQ 95

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVLE 129
           +            QL++    + +++     +R     +LIA  D     +         
Sbjct: 96  QYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDDDHPYLFQSDPSGAY 155

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 A+G       +      +     E     A+
Sbjct: 156 FAWKATAMGKNYVNGKTFLEKRYNVDLELEGAIHTAI 192


>gi|322829389|gb|EFZ32796.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi]
          Length = 237

 Score = 37.7 bits (86), Expect = 0.93,   Method: Composition-based stats.
 Identities = 17/162 (10%), Positives = 49/162 (30%), Gaps = 13/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +T +       VV+A +  ++  + + + +  ++  + +   +    G   D   ++ 
Sbjct: 31  NGSTAVAACCTDGVVVAVEKILTS-RMLEEGSNDRIHAVDRQAGVC-ICGMLPDGRAVVS 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   + E   +             R+ +++                +I         +  
Sbjct: 89  RARAEAENSRDVFATPIPGSVLASRIGEFMHVYTTHYAYRPFGCSVIIASCADDGPQLFV 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                       +A+G G + A +    L     + +E   K
Sbjct: 149 SDPSGTVAGYYGIALGKGKTVAKTELEKLNFKSITCDEAVVK 190


>gi|317492992|ref|ZP_07951416.1| hypothetical protein HMPREF0864_02180 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919114|gb|EFV40449.1| hypothetical protein HMPREF0864_02180 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 171

 Score = 37.7 bits (86), Expect = 0.93,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 56/167 (33%), Gaps = 32/167 (19%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T +         +A D  V+     +  + + V+      +I G  GS+ ++  +     
Sbjct: 2   TTIAF---DGKTLAADSLVTYDGMRVGNSEKIVK------VIGGMLGSAGNSEDVTAA-- 50

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMG-DVLEPENGVM 135
               +      R              L +   + +  D ++          ++ P N   
Sbjct: 51  ----EAWFNAGRP--------EQRPILTSYIGIFIPDDGSVPQEYNERLVQMVLPTNSPW 98

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVL 182
             G+G  +A++A          A + A +A+ IA  + +Y+   + +
Sbjct: 99  VAGTGKCFAMAA--------MLAGKTAPEAVEIAIKLDIYSGGPVRV 137


>gi|209737334|gb|ACI69536.1| Proteasome subunit alpha type-2 [Salmo salar]
          Length = 234

 Score = 37.3 bits (85), Expect = 0.95,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 54/159 (33%), Gaps = 17/159 (10%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           ++    VV+A + +    ++++    +  KV  + K   +  ++G   D   LL R  K 
Sbjct: 38  IKASNGVVLATEKK---QKSILYDETSVHKVEPITKHIGMV-YSGMGPDYGVLLRRARKL 93

Query: 79  LEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDV 127
            +QY           QL++    + + +     +R     +LIA  D+    +       
Sbjct: 94  AQQYFLVYQEPIPTAQLVQRVASVMQKYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSG 153

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                   A+G       +      +     E+    A+
Sbjct: 154 AYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|255965748|gb|ACU45169.1| proteasome subunit beta type 1 [Prorocentrum minimum]
          Length = 123

 Score = 37.3 bits (85), Expect = 0.98,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 26/96 (27%), Gaps = 11/96 (11%)

Query: 103 LRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQ------- 155
                 ++ I D+    V                 GSG S  +S   A +          
Sbjct: 15  YYTFNVLVGIDDEGKGAVYHYDAIGSFERVPYTTSGSGSSLVMSVLDAQIQKGNQTIETP 74

Query: 156 -NSAEEIA---RKAMSIAADICVYTNHNIVLETLKV 187
             + ++I       +S   +  ++T     +  +  
Sbjct: 75  VLTKDKIVDLSMDVLSSVGERDIHTGDAGEIFVIDA 110


>gi|239504313|ref|ZP_04663623.1| hypothetical protein AbauAB_18513 [Acinetobacter baumannii AB900]
          Length = 220

 Score = 37.3 bits (85), Expect = 0.99,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 6/127 (4%)

Query: 16  TTILTVRKDGVVVIAGDGQVS-----LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           T IL ++ +  +VIA D + +      G  + +   +K      G I      +      
Sbjct: 2   TFILAIQLEDSIVIAADTRSTISYQDNGSYLYQDGVQKFFPWENGIITGTGELNLIQNVM 61

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL-IADKTITLVITGMGDVLE 129
           L      K   +    L    +L ++  +      +  ++     K    + +   + LE
Sbjct: 62  LSFNNFTKQNIHELPNLLKKSKLIREQEISHSQLEITKLLYSTYSKNGAQIYSIQPNKLE 121

Query: 130 PENGVMA 136
               +  
Sbjct: 122 EYEVIRC 128


>gi|254412387|ref|ZP_05026161.1| peptidase, T1 family [Microcoleus chthonoplastes PCC 7420]
 gi|196180697|gb|EDX75687.1| peptidase, T1 family [Microcoleus chthonoplastes PCC 7420]
          Length = 257

 Score = 37.3 bits (85), Expect = 1.00,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 57/192 (29%), Gaps = 29/192 (15%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG-QTVMKAN--ARKVRRLGKGNIIAGFAG---SSADAF 69
           T  L +     +V+A D + + G   +   N          +  +I        +     
Sbjct: 2   TYCLGIINRFGIVLAADSRTNAGVDYISTYNKLFDFSLPGERAIVICTSGNLSITQGVIN 61

Query: 70  TLLERLEKKLEQ-------------YPNQLLRSSVELAKDW----RMDKYLRNLEAMILI 112
            L   L+ + E              Y    LR   +  + W    R+D +   L    + 
Sbjct: 62  RLHRDLQSQEELNIHSLPNMYEVTRYIGSKLRQIQDQDRPWLERDRIDFHCSLLVGGQIR 121

Query: 113 ADKTITLVITGMGDVL--EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
            +     +I   G+ +    E   + IG    Y        ++     E +A+ A+    
Sbjct: 122 GEAPQLYLIYTQGNFIQATLETPFLQIGETK-YGKPILDRTLTYDMPLEAVAKCALLS-- 178

Query: 171 DICVYTNHNIVL 182
            I      NI +
Sbjct: 179 -IDSTMKSNISV 189


>gi|321263077|ref|XP_003196257.1| proteasome subunit alpha type 3 [Cryptococcus gattii WM276]
 gi|317462732|gb|ADV24470.1| proteasome subunit alpha type 3, putative [Cryptococcus gattii
           WM276]
          Length = 256

 Score = 37.3 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 62/170 (36%), Gaps = 16/170 (9%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +R    V++  + ++   + ++K   R++  L +   +AG AG  AD   L  R   +
Sbjct: 38  IGLRCKDGVLLGVE-RILHSKLLVKGANRRIASLDEHIGMAG-AGLLADGKHLASRGRDE 95

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVITGMGDV 127
              + +             R+  YL             L A++   DKT   +       
Sbjct: 96  ASNFRDNYNTPVTVQILSDRLSAYLQAYTSYGSVRPFGLSALVGGVDKTGPKLFCLEPSG 155

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEI--ARKAMSIAADICVY 175
           +       A+G G + A +    +++ +    E    R+ +   A I +Y
Sbjct: 156 VYYGYRACAVGKGKALAKTELEKIVNKEVETGEAITVREGVMELARI-IY 204


>gi|331266890|ref|YP_004326520.1| hypothetical protein SOR_1528 [Streptococcus oralis Uo5]
 gi|326683562|emb|CBZ01180.1| hypothetical protein SOR_1528 [Streptococcus oralis Uo5]
          Length = 205

 Score = 37.3 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 18 ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
          ++        +I+GD ++S    +      KV ++    ++ G  GS+    TL E
Sbjct: 6  VIGTVFRNFAIISGDMRMSNSDEITSEKTSKVFKV-NNKVLVGMTGSAQPVITLKE 60


>gi|195578904|ref|XP_002079303.1| GD23876 [Drosophila simulans]
 gi|194191312|gb|EDX04888.1| GD23876 [Drosophila simulans]
          Length = 289

 Score = 37.3 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 44/164 (26%), Gaps = 11/164 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + ++     V+A   + S     ++     V     G  IAG    +      +  
Sbjct: 32  GAATVGLKGADYAVLAALCRTSKDTNTLQRKIMPV-DEHVGMSIAGLTADARVVCQYMRT 90

Query: 75  LEKKLEQYPNQLLRSSVELAK--------DWRMDKYLRNLEAMILIADKTITLVITGMGD 126
                    +        +A           R D+    +  ++   D+    +   M  
Sbjct: 91  ECMAYRHSYDAEFPVRRLVANLGNKLQTTTQRYDRRPYGVGMLVAGYDEQGPHIYQVMPT 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
                   MAIGS    A +     M +      +E+   A+  
Sbjct: 151 ANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQA 194


>gi|195351227|ref|XP_002042137.1| GM10300 [Drosophila sechellia]
 gi|194123961|gb|EDW46004.1| GM10300 [Drosophila sechellia]
          Length = 270

 Score = 37.3 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 44/164 (26%), Gaps = 11/164 (6%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + ++     V+A   + S     ++     V     G  IAG    +      +  
Sbjct: 32  GAATVGLKGADYAVLAALCRTSKDTNTLQRKIMPV-DEHVGMSIAGLTADARVVCQYMRT 90

Query: 75  LEKKLEQYPNQLLRSSVELAK--------DWRMDKYLRNLEAMILIADKTITLVITGMGD 126
                    +        +A           R D+    +  ++   D+    +   M  
Sbjct: 91  ECMAYRHSYDAEFPVRRLVANLGNKLQTTTQRYDRRPYGVGMLVAGYDEQGPHIYQVMPT 150

Query: 127 VLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
                   MAIGS    A +     M +      +E+   A+  
Sbjct: 151 ANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELICHAIQA 194


>gi|109121839|ref|XP_001098657.1| PREDICTED: proteasome subunit alpha type-7-like [Macaca mulatta]
          Length = 261

 Score = 37.3 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
             +T + +R   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  ++ 
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDH-VCMAFAGLTADARVVIN 87

Query: 74  RLEKKLEQYPNQLLRSSV 91
           R   + + +   +     
Sbjct: 88  RARVECQSHKLTVEDPVT 105


>gi|302877322|ref|YP_003845886.1| 20S proteasome, A and B subunits [Gallionella capsiferriformans
           ES-2]
 gi|302580111|gb|ADL54122.1| 20S proteasome, A and B subunits [Gallionella capsiferriformans
           ES-2]
          Length = 241

 Score = 37.3 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 7/144 (4%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  +    D  +V A D + + G          +   R G   ++   +G+ A     L 
Sbjct: 2   TYCVATMIDAGIVFASDSRTNAGVDNISTFRKMKTFERKGDRVLVVVNSGNLAITQATLN 61

Query: 74  RLEKKLEQYPNQLLRS-SVELAKDWRMDKYLRNLE----AMILIADKTITLVITGMGDVL 128
            LE+++       L S          +   LR +       +   +   +      G + 
Sbjct: 62  YLEQEIRHSTEANLMSVCSMYEVAELIGSALREVRHRDGPYLAENNVDCSANFIVGGQIT 121

Query: 129 EPENGVMAIGSGGSYALSAARALM 152
                +  I + G++  +      
Sbjct: 122 GEPQRLFLIYAEGNFIEATPETPY 145


>gi|146091282|ref|XP_001466490.1| proteasome alpha 7 subunit [Leishmania infantum JPCM5]
 gi|134070852|emb|CAM69211.1| putative proteasome alpha 7 subunit [Leishmania infantum JPCM5]
          Length = 238

 Score = 37.3 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 51/162 (31%), Gaps = 13/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T +       VV+A +   +  + + K +  ++  + +   I    G   D   ++ 
Sbjct: 33  NSSTAVAACCKDGVVVAVEKIYTS-RMLEKGSNNRIHAVDRQAGIC-ICGLLPDGRAIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++ E   +             R+ +++               A+I         +  
Sbjct: 91  RARQEAENSRDIFATPIRGSVLANRVGEFMHVYTTHFAYRPFGCSAIIASYADDGPQLFV 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                       +A+G   + A S    L  +  + ++   K
Sbjct: 151 SDPSGTVAGYYGVALGKAKTVAKSELEKLDFSSLTCDDAVVK 192


>gi|84662644|ref|YP_453609.1| HslV family protein [Xanthomonas phage OP1]
 gi|84570693|dbj|BAE72756.1| HslV family protein [Xanthomonas oryzae phage OP1]
          Length = 142

 Score = 37.3 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 40/165 (24%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           TTI     DG   +A D QV+ G   +K    K RRL  G ++            + + L
Sbjct: 2   TTI---AYDGQS-LACDSQVTAGN--VKGKMNKFRRLPGGGVMIVAGEIDLLDNAVQDFL 55

Query: 76  EKK----LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
           + +    L     Q        A+  R+D+           +D     +  G        
Sbjct: 56  DGEPPAVLRDQDGQER------AQFVRLDR-----SGCFYSSDGEWNKMYPGD------- 97

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYT 176
               A+GSG  YAL+     +    SA    ++A+  A ++ +Y+
Sbjct: 98  ----ALGSGAPYALT----CLHIGMSA----KQAVKTACELDLYS 130


>gi|322500105|emb|CBZ35180.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 238

 Score = 37.3 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 51/162 (31%), Gaps = 13/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +++T +       VV+A +   +  + + K +  ++  + +   I    G   D   ++ 
Sbjct: 33  NSSTAVAACCKDGVVVAVEKIHTS-RMLEKGSNNRIHAVDRQAGIC-ICGLLPDGRAIVS 90

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R  ++ E   +             R+ +++               A+I         +  
Sbjct: 91  RARQEAENSRDIFATPIRGSVLANRVGEFMHVYTTHFAYRPFGCSAIIASYADDGPQLFV 150

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                       +A+G   + A S    L  +  + ++   K
Sbjct: 151 SDPSGTVAGYYGVALGKAKTVAKSELEKLDFSSLTCDDAVVK 192


>gi|300121417|emb|CBK21797.2| unnamed protein product [Blastocystis hominis]
          Length = 283

 Score = 37.3 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 48/182 (26%), Gaps = 38/182 (20%)

Query: 15  ATTILTVRKDGVVVIAGDGQ-----VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
            +    +R +  VV+    +      S          RK+  +     IA  +G +ADA 
Sbjct: 32  GSACCGIRTNKYVVLGAFRRRPNELASYQ--------RKIVEIDTHMGIA-MSGLTADAR 82

Query: 70  TLLERLEKKLEQYPNQLLRSSVELA-----------KDWRMDKYLRNLEAMILIADKTIT 118
            L + +  +   +     R                      ++    +  +I   D    
Sbjct: 83  ALSKYMRTECMDHEYVYGRKMPMEMLVRQVAEKEHFCTLTYERRPYGVGLLIGGVDSKGP 142

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNSAEE---IARKA 165
            +          E     IGS    A +A               S   + +E   I   A
Sbjct: 143 HLFHTSPSGEYLEYSACTIGSRSQSAKTALSRRFLNEETNVVTVSDDLTLDELINIVLDA 202

Query: 166 MS 167
           + 
Sbjct: 203 LK 204


>gi|209733702|gb|ACI67720.1| Proteasome subunit alpha type-2 [Salmo salar]
          Length = 234

 Score = 37.3 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 15/158 (9%)

Query: 21  VRKDGVVVIAG-DGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
           ++    VV+A  + Q S+     + +  KV  + K   +  ++G   D   LL R  K  
Sbjct: 38  IKASNGVVLATEEKQKSI--LYDETSVHKVEPITKHIGMV-YSGMGPDYRVLLRRARKLA 94

Query: 80  EQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--DKTITLVITGMGDVL 128
           +QY           QL++    + +++     +R     +LIA  D+    +        
Sbjct: 95  QQYFLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGA 154

Query: 129 EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  A+G       +      +     E+    A+
Sbjct: 155 YFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAI 192


>gi|300120657|emb|CBK20211.2| unnamed protein product [Blastocystis hominis]
          Length = 124

 Score = 37.3 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 6/67 (8%), Positives = 18/67 (26%)

Query: 94  AKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS 153
              + + +    +  ++   D  +  +          +    + G      L+    L  
Sbjct: 11  TVAYYLRRQPYQVNFILGGVDDDVPSIYYLDYLGTLQKMNYASHGYPSYILLALFDRLWK 70

Query: 154 TQNSAEE 160
              + EE
Sbjct: 71  KDMTREE 77


>gi|22297703|ref|NP_680950.1| hypothetical protein tlr0159 [Thermosynechococcus elongatus BP-1]
 gi|22293880|dbj|BAC07712.1| tlr0159 [Thermosynechococcus elongatus BP-1]
          Length = 273

 Score = 37.3 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 45/178 (25%), Gaps = 26/178 (14%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG---NIIAGFAGSSADAFT 70
             T  L +     +V+A D + + G   +    +       G    +I      S     
Sbjct: 10  KMTYCLGILTTSGLVMAADSRTNAGVDYISTYQKLFDFSVPGERVIVICTAGNLSITQEV 69

Query: 71  L---LERLEKKLEQ-------------YPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
           L      L+ +LE              Y    LR   E  + W     +      ++   
Sbjct: 70  LTLIRRDLKAQLEHSLNTLPNMYEVARYVGHKLRQVSESHRSWLAKDNIDYQCTFLVGGQ 129

Query: 115 --KTITLVITGMGD----VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  +             PE   + IG    Y        +      +  A+ A+
Sbjct: 130 IRGEEPYLYLIYSQGNFLQATPETPFLQIGETK-YGKPILDRTLRFDTPVDAAAKYAL 186


>gi|58270734|ref|XP_572523.1| proteasome subunit alpha type 3 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134115981|ref|XP_773377.1| hypothetical protein CNBI3160 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256001|gb|EAL18730.1| hypothetical protein CNBI3160 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57228781|gb|AAW45216.1| proteasome subunit alpha type 3, putative [Cryptococcus neoformans
           var. neoformans JEC21]
          Length = 256

 Score = 36.9 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 13/153 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +R    V++  + ++   + ++K   R++  L +   +AG AG  AD   L  R   +
Sbjct: 38  IGLRCKDGVLLGVE-RILHSKLLVKGANRRIASLDEHIGMAG-AGLLADGKHLASRGRDE 95

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVITGMGDV 127
              + +             R+  YL             L A++   DKT   +       
Sbjct: 96  ASNFRDTYNTPVTVQILSDRLSAYLQAYTSYGSVRPFGLSALVGGVDKTGPKLFCVEPSG 155

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           +       A+G G + A +    +++ +    E
Sbjct: 156 VYYGYRACAVGKGKALAKTELEKVVNKEVETGE 188


>gi|290562643|gb|ADD38717.1| Proteasome subunit alpha type-2 [Lepeophtheirus salmonis]
          Length = 235

 Score = 36.9 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 51/165 (30%), Gaps = 15/165 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             + + +R     V+A + +++    +      ++ ++     +  ++G S D   L+++
Sbjct: 31  GASSVAIRATNGAVLAVEKKLNS-TLIDSTTVNRIEKITDNIGMV-YSGLSPDFRVLVKQ 88

Query: 75  LEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA----DKTITLVI 121
             K  + Y           QL+     + ++      +R     +L+A    D+    V 
Sbjct: 89  ARKIAQSYQMAYGQQIPPSQLVTRIAGVMQEHTQSGGVRPFGVSLLVAGWEEDENEASVN 148

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                         A+G                    ++    A+
Sbjct: 149 QCDPSGTHFAWKATALGKNAINGKVFLEKRYHDDVELDDAVHAAI 193


>gi|300123465|emb|CBK24737.2| unnamed protein product [Blastocystis hominis]
          Length = 316

 Score = 36.9 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 49/182 (26%), Gaps = 38/182 (20%)

Query: 15  ATTILTVRKDGVVVIAGDGQ-----VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
            +    +R +  VV+    +      S          RK+  +     IA  +G +ADA 
Sbjct: 32  GSACCGIRTNKYVVLGAFRRRPNELASYQ--------RKIVEIDTHMGIA-MSGLTADAR 82

Query: 70  TLLERLEKKLEQYPNQLLRSSVELA-----------KDWRMDKYLRNLEAMILIADKTIT 118
            L + +  +   +     R                      ++    +  +I   D    
Sbjct: 83  ALSKYMRTECMDHEYVYGRKMPMEMLVRQVAEKEHFCTLTYERRPYGVGLLIGGVDSKGP 142

Query: 119 LVITGMGDVLEPENGVMAIGSGGSYALSAARALM----------STQNSAEE---IARKA 165
            +          E    AIGS    A +A               S   + +E   I   A
Sbjct: 143 HLFHTSPSGEYLEYSACAIGSRSQSAKTALSRRFLNEETNVVTVSDDLTLDELISIVLDA 202

Query: 166 MS 167
           + 
Sbjct: 203 LK 204


>gi|118575381|ref|YP_875124.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
 gi|118193902|gb|ABK76820.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
          Length = 238

 Score = 36.9 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 35/155 (22%), Gaps = 14/155 (9%)

Query: 14  HATTILTVRKDGVVVIAGD--GQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
             T  + V     VVIA +   +            +  +      + A      A     
Sbjct: 31  RGTLAIGVSSKEGVVIAVEEKPRA---LQTANITQKIFQVDRHIGVAAAGYIPDARIQVD 87

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDW-------RMDKYLRNLEAMILIA--DKTITLVIT 122
             R   +  +           +AK              +R     ++IA  D     V  
Sbjct: 88  NARFFSQGNRITYDEPVEVETVAKYLADQCHQFTQYSGVRPYGVALIIAGVDIKGEGVYV 147

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
                       +AIG+G                S
Sbjct: 148 TDPSGTFVPYSAVAIGAGADDVNEFLEKQYKPDMS 182


>gi|323451135|gb|EGB07013.1| hypothetical protein AURANDRAFT_37911 [Aureococcus anophagefferens]
          Length = 266

 Score = 36.9 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 17/166 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            +  L +  +G VV+A   +       +    RK+ ++ +   IA  AG +ADA TL + 
Sbjct: 32  GSACLGIVGEGCVVLAALKR---QPNELSGYQRKLLKIDEHMTIA-VAGLNADARTLAKT 87

Query: 75  LEKKLEQYPNQLLRSSVELA-------KDWRMDKYL----RNLEAMILIADKTITLVITG 123
           +  +   +                   K  R  +        +  ++   D T   +   
Sbjct: 88  MRTECLNHRYVYGAPLQGARLVLDIADKYQRCTQMYVRRPYGVGLLVACVDATGPHLYET 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMS 167
                  E   +AIG+    A +     +        +E+ + A+ 
Sbjct: 148 CPSGNYNEYVAVAIGARAQSAKTYLEKHVDAFKGCGVDELCKHALK 193


>gi|170047595|ref|XP_001851301.1| proteasome component PRE2 [Culex quinquefasciatus]
 gi|167869977|gb|EDS33360.1| proteasome component PRE2 [Culex quinquefasciatus]
          Length = 198

 Score = 36.9 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 36/124 (29%), Gaps = 34/124 (27%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           H TT L  R  G V++A D        V  A  +K+ ++ +     +AG A  S    TL
Sbjct: 5   HGTTTLGFRLQGEVILAVD-------LVPPATMKKIVKINEYLLETLAGGAADSRSCPTL 57

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPE 131
                                            ++  M+   DK    +     +     
Sbjct: 58  CTY-------------------------KSMFISMGMMLAGYDKRGPQLYYIDSEGTHTP 92

Query: 132 NGVM 135
             V+
Sbjct: 93  GKVV 96


>gi|72086784|ref|XP_793435.1| PREDICTED: similar to Proteasome (prosome, macropain) subunit, beta
           type, 2, partial [Strongylocentrotus purpuratus]
          Length = 106

 Score = 36.9 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 15/54 (27%), Gaps = 3/54 (5%)

Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAM 166
               +          +    A G G  + LS          +   A E+ +K +
Sbjct: 16  DGPCLFYMDYLGSLQQVPFAAHGYGSYFTLSILDRHYRRDMTRDQAVEVLKKCL 69


>gi|308501208|ref|XP_003112789.1| CRE-PAS-1 protein [Caenorhabditis remanei]
 gi|308267357|gb|EFP11310.1| CRE-PAS-1 protein [Caenorhabditis remanei]
          Length = 246

 Score = 36.9 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 46/178 (25%), Gaps = 17/178 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL- 75
           T + V+     VIA   +V     ++      V ++ +              F +     
Sbjct: 38  TAVAVKGVDTAVIAIQKRV-PDSLIVADTVTSVYQISQTVGCCAIGMIPDAKFQVKRAQG 96

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEA----------MILIADKTITLVITGMG 125
           E    +Y N        LAK            A           I   D+    V     
Sbjct: 97  EAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDP 156

Query: 126 DVLEPENGVMAIGSGGSYALSAARA--LMSTQN---SAEEIARKAMSIAADICVYTNH 178
                    +++G     A S         +        E+A +A+  +  I V +  
Sbjct: 157 AGYYRGMKGVSVGVKQVPATSFLEKKIKKKSDLNSTETVELAIEALQNSLGIDVRSKD 214


>gi|82541727|ref|XP_725084.1| patatin [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479957|gb|EAA16649.1| Patatin, putative [Plasmodium yoelii yoelii]
          Length = 1852

 Score = 36.9 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query: 151  LMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
            L      A E+A+K     A + +Y N NI +E +
Sbjct: 1026 LKKENVDALEVAKKRFESWASLDIYKNSNIDVEPI 1060


>gi|209966505|ref|YP_002299420.1| hypothetical protein RC1_3246 [Rhodospirillum centenum SW]
 gi|209959971|gb|ACJ00608.1| hypothetical protein RC1_3246 [Rhodospirillum centenum SW]
          Length = 186

 Score = 36.9 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 53/164 (32%), Gaps = 14/164 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T I+ + +   V + GD     G  +      KV R   G+++ GF  S      L  RL
Sbjct: 2   TCIVGLVEGSTVWMGGDSAGVAGLDISLRADPKVFR--NGDLLIGFTSSFRMGQLLRFRL 59

Query: 76  EKK-------LEQYPNQLLRSSVELAKD---WRMDKYLRNLEAMILIADKTITLVITGMG 125
                     L  Y       +V +      +             L+A +     +    
Sbjct: 60  RPPLRRPDQDLFHYMVCEFVEAVRVCLKEGGFAHRSNDVETGGFFLVATEGRLFSVQDDY 119

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIA 169
            V E   G  AIG G  YAL +          AE+  R A+  A
Sbjct: 120 QVSEFSRGFHAIGCGAHYALGSLYTTR--DLPAEQRVRLALETA 161


>gi|197127387|gb|ACH43885.1| putative proteasome subunit alpha type 4 [Taeniopygia guttata]
          Length = 184

 Score = 36.9 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 46/150 (30%), Gaps = 11/150 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSSADAFTL 71
           HA T L +  +  V++A + +           + K+ +L +      AG    +      
Sbjct: 30  HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNE 89

Query: 72  LERLEKKLEQY------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VIT 122
           L  + ++            QL+ +  ++ + +      R     +L           +  
Sbjct: 90  LRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 149

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALM 152
                         I +  + A+S  +A +
Sbjct: 150 SDPSGNYGGWKATCIXNNSAAAVSMLKAXL 179


>gi|195473531|ref|XP_002089046.1| Pros35 [Drosophila yakuba]
 gi|194175147|gb|EDW88758.1| Pros35 [Drosophila yakuba]
          Length = 286

 Score = 36.9 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 15/154 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++     V+    + +     + A  RK+  +     I+  AG +ADA  L   
Sbjct: 35  GTATVGLKNKETAVLVALCKPTSE---LSATQRKIIPIDDHLGIS-IAGLTADARVLSRY 90

Query: 75  LEKKLEQYPNQ------LLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +       + R    L         R D+    +  ++   D+    +   
Sbjct: 91  LRSECLNYKHSYDSTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQV 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
                       +IGS    A +     ++    
Sbjct: 151 TPSATFFNCKANSIGSRSQSARTYLEKKLNEFLD 184


>gi|322495730|emb|CBZ31036.1| putative proteasome alpha 1 subunit [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 250

 Score = 36.5 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 51/178 (28%), Gaps = 26/178 (14%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
            + +R    V++A   Q  +   +++ ++         +I     G + D   L++R  +
Sbjct: 36  TVAIRCKDAVLVA--TQHVIPDRLIRPDSVTALYEVTPSIGCCMTGRAPDGRALVQRARE 93

Query: 78  KLEQYPNQLLRSSVELAKDWRM-----------DKYLRNLEAMILIADKTI------TLV 120
           +   Y  +            RM                 +    +  D++         +
Sbjct: 94  EASDYHYRYGMQIPIAVLAKRMGDKAQVRTQQAGLRPMGVVTTFIGMDQSDQDGSLKPKI 153

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST----QNSAEE---IARKAMSIAAD 171
            T         +   A+G     A++              + +E   IA  A+  A  
Sbjct: 154 YTVDPAGWTGGHIACAVGKKQVEAMAFLEKRQKNTDFDDLTEKEAAMIALAALQSAIG 211


>gi|300707420|ref|XP_002995918.1| hypothetical protein NCER_101068 [Nosema ceranae BRL01]
 gi|239605159|gb|EEQ82247.1| hypothetical protein NCER_101068 [Nosema ceranae BRL01]
          Length = 243

 Score = 36.5 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 41/164 (25%), Gaps = 9/164 (5%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGF-AGSSADAFTL 71
           +  T + ++    VV+  +  +     +   N R  +       +  G           L
Sbjct: 28  NGNTAICIKNKKGVVMIAEKPLESKLFITDVNNRIKKVNDSIYQVACGIETDIVYVNHHL 87

Query: 72  LERLEKK-----LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK--TITLVITGM 124
              L  +     ++     L    V L   +      R L   IL   K      +I   
Sbjct: 88  KNVLINEKHQMDMDINYENLRNQLVTLVHMFTKYSGARPLGINILTCIKYNNEYKIIHTD 147

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
                       IG G     +    L        ++    + I
Sbjct: 148 CSGKSLFFKSAVIGKGSRIVKTELEKLKLEDLEVSDLVENGIRI 191


>gi|296805341|ref|XP_002843495.1| proteasome component C1 [Arthroderma otae CBS 113480]
 gi|238844797|gb|EEQ34459.1| proteasome component C1 [Arthroderma otae CBS 113480]
          Length = 313

 Score = 36.5 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 38/117 (32%), Gaps = 5/117 (4%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +  T + +R    VV+A +  +S    ++K  A K       NI    +G   D    + 
Sbjct: 52  NGGTSIGIRCKDGVVLAVEKIIS--SKLLKPGANKRIATVDRNIGIVSSGLIPDGRHFVS 109

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP 130
           R   +   + +             R+  Y+   +A  L +      +   +G     
Sbjct: 110 RARDEASSWRSTYKGPIPTDVLASRLGGYV---QAYTLYSSVRPFGISAIIGGWDSE 163


>gi|239799225|dbj|BAH70545.1| ACYPI005674 [Acyrthosiphon pisum]
          Length = 279

 Score = 36.5 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            + ++ ++      I    +       + A  +K+  +      + F+G  ADA  L + 
Sbjct: 32  GSAVVALKNKTHAAIVALKRA---PNELSAYQKKIILVDDHLGFS-FSGLLADARILSKY 87

Query: 75  LEKKLEQYPN-----------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +                 S+       R DK    +  ++   D     +   
Sbjct: 88  MRSECSSHKFAHGDDLPVNRLMTKVSNRMQLCTQRYDKRPYGVGLLVAGYDDNGPHIYQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
                      MAIGS    A +     +    + S EE+ +  M  
Sbjct: 148 CPSANYTNCKAMAIGSRSQSARTYLERNLEAFKEASLEELLKHGMRA 194


>gi|193674111|ref|XP_001946453.1| PREDICTED: proteasome subunit alpha type-1-like [Acyrthosiphon
           pisum]
          Length = 279

 Score = 36.5 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            + ++ ++      I    +       + A  +K+  +      + F+G  ADA  L + 
Sbjct: 32  GSAVVALKNKTHAAIVALKRA---PNELSAYQKKIILVDDHLGFS-FSGLLADARILSKY 87

Query: 75  LEKKLEQYPN-----------QLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +   +                 S+       R DK    +  ++   D     +   
Sbjct: 88  MRSECSSHKFAHGDDLPVNRLMTKVSNRMQLCTQRYDKRPYGVGLLVAGYDDNGPHIYQT 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
                      MAIGS    A +     +    + S EE+ +  M  
Sbjct: 148 CPSANYTNCKAMAIGSRSQSARTYLERNLEAFKEASLEELLKHGMRA 194


>gi|255936701|ref|XP_002559377.1| Pc13g09540 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583997|emb|CAP92023.1| Pc13g09540 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 253

 Score = 36.5 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 18/163 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLER 74
           T + VR     V+    +V   + +  ++   V ++    G ++ G    +  +      
Sbjct: 35  TSIGVRGKDCAVVISQKKV-ADKLIEPSSVSHVFKISPSVGCVMTGSIADARASVDRARG 93

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITGM 124
              +   Y          LAK       +    A +           + D++   +    
Sbjct: 94  EAAEFR-YKFGYEMPCDVLAKRLANINQVYTQRAYMRPLGVATTLISVDDESGPQLYKCD 152

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSA----EEIAR 163
                      A G     AL+     +  +++A    EE+  
Sbjct: 153 PAGYYVGYKATASGPKQQEALNYLEKKLKNKDAATGSWEEVVE 195


>gi|224034067|gb|ACN36109.1| unknown [Zea mays]
          Length = 170

 Score = 36.5 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 18/148 (12%)

Query: 54  KGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMD------------K 101
             +I    +G  ADA TL+E    + + +           +    +              
Sbjct: 4   DEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESSTQAICDLALRFGEGDEES 63

Query: 102 YLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN--- 156
             R     +LIA  D+    +          +    AIGSG   A S+ +   + +    
Sbjct: 64  MSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELALE 123

Query: 157 SAEEIARKAMSIAADICVYTNHNIVLET 184
            AE IA   +    +  V T +N+ +  
Sbjct: 124 EAETIALSILKQVMEEKV-TPNNVDIAK 150


>gi|289620055|emb|CBI53499.1| unnamed protein product [Sordaria macrospora]
          Length = 249

 Score = 36.5 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 39/153 (25%), Gaps = 14/153 (9%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           +  + + S  +            L   ++   FAG +ADA  L+++   + + +   L  
Sbjct: 25  LGCEKR-SAMKLQDTRITPSKIGLVDKHVCLAFAGLNADARILVDKARLEAQSHRLNLED 83

Query: 89  SSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLVITGMGDVLEPENGVM 135
                     +A   +       +    +            +  +       +       
Sbjct: 84  PVTIEYITKYIAGVQQRYTQSGGVRPFGISTLIVGFDNGSDVPRLYQTEPSGIYSAWKAN 143

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           AIG                +   E   R A+  
Sbjct: 144 AIGRSSKTVREFLERNYKDEMDREATIRLAIKS 176


>gi|37521028|ref|NP_924405.1| hypothetical protein glr1459 [Gloeobacter violaceus PCC 7421]
 gi|35212024|dbj|BAC89400.1| glr1459 [Gloeobacter violaceus PCC 7421]
          Length = 258

 Score = 36.5 bits (83), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 5/50 (10%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS 65
          T I+ ++    VV+A D ++++ +     N + V        + G  G +
Sbjct: 2  TIIVALKVSSGVVLAADSRLTIQE-----NGQLVFLSDSNLKLFGVQGHA 46


>gi|322707228|gb|EFY98807.1| proteasome component PRE6 [Metarhizium anisopliae ARSEF 23]
          Length = 342

 Score = 36.5 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 42/153 (27%), Gaps = 14/153 (9%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           +  + + ++     +    K++ L     +A FAG +ADA  L+++   + + +   +  
Sbjct: 118 LGCEKRSAMKLQDTRITPSKIQLLDTHTALA-FAGLNADARILVDKARLEAQSHRLSVED 176

Query: 89  SSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPENGVM 135
                     +A   +       +    +            +  +       +       
Sbjct: 177 PVTIDYITKYVAGVQQRYTQAGGVRPFGISTLVVGFDPGSKVPRLYQTEPSGIYSAWKAN 236

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           AIG                    E   R A+  
Sbjct: 237 AIGRSSKTVREFLERNYKDDMDREATIRLAIKS 269


>gi|296824130|ref|XP_002850566.1| proteasome subunit alpha type 6 [Arthroderma otae CBS 113480]
 gi|238838120|gb|EEQ27782.1| proteasome subunit alpha type 6 [Arthroderma otae CBS 113480]
          Length = 265

 Score = 36.5 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 44/168 (26%), Gaps = 18/168 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLER 74
           T L VR     VI    +V   + +  ++   V ++    G ++ G         T    
Sbjct: 36  TSLGVRGKNCAVIISQKKV-PDKLIEPSSVSHVFKISPSVGCVVTGSIADGRAQVTRARS 94

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTI-TLVITGM 124
              + E Y          LAK       +    A +         +  D      +    
Sbjct: 95  EAAEFE-YKFGYEMPCDVLAKRLANISQVYTQRAYMRPLGVATTLISVDSENGPQLFKCD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSA----EEIARKAMSI 168
                      A G      ++     +  +       EE+   A++ 
Sbjct: 154 PAGYYVGYRATASGPKQQEIMNLLEKKLKNKEDGGANWEEVVELAITT 201


>gi|195396889|ref|XP_002057061.1| GJ16557 [Drosophila virilis]
 gi|194146828|gb|EDW62547.1| GJ16557 [Drosophila virilis]
          Length = 234

 Score = 36.5 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 51/168 (30%), Gaps = 16/168 (9%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + +     +V+A + ++    T+     +K+ ++     +A ++G + D   L +
Sbjct: 31  KGAPTVGIITKNGLVLATEKRIDSKLTI-GRTVKKLEKISSHMAMA-YSGMAPDFRILSK 88

Query: 74  RLEKKLEQYPNQLL---------RSSVELAKDWRMDKYLRNLEAMILIADKTIT--LVIT 122
             +K    Y               +     +++     +R     +L+         +  
Sbjct: 89  MAQKTCAAYSLVHSGIVPVDGMAMAVSNTMQEFTQSCGVRPFGLSVLLGGWERGRARLFR 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMS 167
                        A+G      +       + + +   A  +A +A+ 
Sbjct: 149 LDAAGSLLPFRACAVGKDAEQRMEFLERHYAPRLTMEAAVYLAIQAIR 196


>gi|297804748|ref|XP_002870258.1| hypothetical protein ARALYDRAFT_493374 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316094|gb|EFH46517.1| hypothetical protein ARALYDRAFT_493374 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 451

 Score = 36.5 bits (83), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 21/60 (35%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           +A + + +     VV+ G+ +V+        +  K+ ++      A         F L  
Sbjct: 327 NAGSAIGILAKDGVVLVGEKKVTSKLLQTSMSTEKMYKIDDHVACAVAGWDKNHGFQLYM 386


>gi|330797626|ref|XP_003286860.1| proteasome subunit alpha type 6 [Dictyostelium purpureum]
 gi|325083162|gb|EGC36622.1| proteasome subunit alpha type 6 [Dictyostelium purpureum]
          Length = 245

 Score = 36.5 bits (83), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 55/190 (28%), Gaps = 24/190 (12%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             A+K    T + +R    VV+A   ++   + +   +   + +L               
Sbjct: 28  FKAIKTGGLTSVGIRGKDSVVVATQKKI-PDKLIDPKSITSLYKLTDYIGCVQTGIVPDS 86

Query: 68  AFTLLERLEKKLEQYPN--------QLLRSSVELAKDWRMDKYLRNLEAMILIA---DKT 116
              +   +++    +           L +   ++A+        R L   +++    D+ 
Sbjct: 87  KSQVSRAIQECASFHHKFGYQMPPNVLAKRIADIAQLSTQHASARPLGVAMILIGIDDEL 146

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSI------ 168
              +       +         G       +        + Q S +E  + A+S       
Sbjct: 147 GPQLYKIDPAGVYCGYKATGAGEKEQETTNFLEKKFKSNPQLSRDETIQMAISTLQNVLG 206

Query: 169 ----AADICV 174
               A+DI +
Sbjct: 207 ADLKASDIEI 216


>gi|225719428|gb|ACO15560.1| Proteasome subunit alpha type-2 [Caligus clemensi]
          Length = 237

 Score = 36.5 bits (83), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 49/165 (29%), Gaps = 15/165 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + ++    VV+A + +        + +  K+  +        ++G   D   L+ R
Sbjct: 32  GAASVGIKASNGVVLATEKKHKS-TLHEEHSIHKIEEISSNIG-MTYSGMGPDYRLLVRR 89

Query: 75  LEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT----ITLVI 121
             K  EQY           QL+    ++ +++     +R     +LIA          + 
Sbjct: 90  ARKMAEQYSMMYGEKIPSGQLVARVADVMQEYTHSGGVRPFGVSLLIAGWDEEANKPYLF 149

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                         A+G+      +            E+    A+
Sbjct: 150 QCDPSGAYFAWKATAMGNNFVNGKTFLEKRYDDAVELEDAVHTAI 194


>gi|237874223|ref|NP_001153869.1| proteasome 25 kDa subunit [Acyrthosiphon pisum]
 gi|239799361|dbj|BAH70604.1| ACYPI001003 [Acyrthosiphon pisum]
          Length = 239

 Score = 36.1 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 52/157 (33%), Gaps = 14/157 (8%)

Query: 21  VRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLE 80
           ++    VV+A + +      + +    KV+++     +  ++G   D   L+ +  K+  
Sbjct: 38  IKASNGVVVATENK--RKSLLYETTVEKVQKITPNIGMV-YSGMGPDYRLLVRKARKEAA 94

Query: 81  QYPNQ---------LLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDVLE 129
           QY  +         L++    + +++     +R     +L+   DKT   +         
Sbjct: 95  QYQLKFEEEIPTALLVQEVASVMQEYTQSGGVRPFGVSLLVCGWDKTGPKLYQCDPSGAF 154

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 A+G     +              E+    A+
Sbjct: 155 FAWKATALGKNYVNSKQFLEKRYKEDLELEDAIHTAI 191


>gi|66815973|ref|XP_642003.1| proteasome subunit alpha type 6 [Dictyostelium discoideum AX4]
 gi|74856489|sp|Q54XM7|PSA6_DICDI RecName: Full=Proteasome subunit alpha type-6
 gi|60470044|gb|EAL68025.1| proteasome subunit alpha type 6 [Dictyostelium discoideum AX4]
          Length = 250

 Score = 36.1 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/174 (10%), Positives = 51/174 (29%), Gaps = 14/174 (8%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSAD 67
             A+K    T + +R    VV+A   ++   + +   +   + +L               
Sbjct: 28  FKAIKTGGLTSVGIRGKDCVVVATQKKI-PDKLIDPKSVTSLYKLTDYIGCVQTGIVPDS 86

Query: 68  AFTLLERLEKKLEQYPN--------QLLRSSVELAKDWRMDKYLRNLEAMILIA---DKT 116
                  +++    +           L +   ++A+        R L   +++    D+ 
Sbjct: 87  KSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLSTQHASARPLGVAMILIGIDDEL 146

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAMSI 168
              +       +       A G     + +        + Q S +E  + ++ +
Sbjct: 147 GPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLIV 200


>gi|255070531|ref|XP_002507347.1| proteasome subunit alpha type-1-b [Micromonas sp. RCC299]
 gi|226522622|gb|ACO68605.1| proteasome subunit alpha type-1-b [Micromonas sp. RCC299]
          Length = 251

 Score = 36.1 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 51/173 (29%), Gaps = 21/173 (12%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               +  +    VV+A   + +     + ++ +K+ R   G  +A  +G +AD    +  
Sbjct: 43  GGATVGCKSKEYVVLATLKRAASE---LSSSQQKIFRADDGIGVA-ISGLTADGTAAIRA 98

Query: 75  LEKKLEQYPNQLLRSS------------VELAKDWRMDKYLRNLEAMILIADKTITLVIT 122
           L +    +                     ++    R       +  +I   D     +  
Sbjct: 99  LRQDCTSHSFTFQSQVEVCRLAGRIADKWQVVCSQRSGSRPSGVGLLIAGRDMRGCHLYQ 158

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARA----LMSTQN-SAEEIARKAMSIAA 170
                   ++   AIG+    + +        + +        +A +A+  A 
Sbjct: 159 VCPSGNLYDHVAAAIGARSQASKTYLEKFQVQMDNFSLQDLILLALRALKEAT 211


>gi|194860819|ref|XP_001969659.1| GG23827 [Drosophila erecta]
 gi|190661526|gb|EDV58718.1| GG23827 [Drosophila erecta]
          Length = 289

 Score = 36.1 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + ++ +   V+A   + S     ++     V     G++    AG +ADA  + + 
Sbjct: 32  GAATVGLKSNNYAVLAALCRTSKDTNTLQRKIMPV----DGHVGMSIAGLTADARVVCQY 87

Query: 75  LEKKLEQYPNQ------LLRSSVEL-----AKDWRMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +       + R    L     A   R D+    +  ++   D+    +   
Sbjct: 88  LRTECMAYRHSYDAEFPVRRLVANLGNKLQATTQRYDRRPYGVGMLVAGYDEQGAHIYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAMSI 168
           M          MAIGS    A +     M +      +E+   A+  
Sbjct: 148 MPTANVLNCRAMAIGSRSQSARTYLERNMESFEDCDRDELICHAIQA 194


>gi|11066269|gb|AAG28528.1|AF198387_1 20S proteasome alpha 3 subunit [Trypanosoma brucei]
          Length = 286

 Score = 36.1 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 45/164 (27%), Gaps = 19/164 (11%)

Query: 15  ATTILTVRKDGVVVIAGDG--QV----SLGQTVMKANARKVRRLGKGNII--AGFAGSSA 66
           A TI+ +   G VV+  +   Q     +     +  +  KV ++        AG    + 
Sbjct: 31  AGTIIGILTTGGVVLDAERGQQHGLFDTENMEDINISGEKVYKISNHLGCSVAGVTSDAY 90

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKD-------WRMDKYLRNLEAMILIADKTITL 119
                      +   Y  Q   ++ +L +        +     +R      L A      
Sbjct: 91  ALINYARLSAAR-HFYSFQEPIAAEDLCRMVCDEKQLYTQYGGVRPFGVSFLFAGWDRHY 149

Query: 120 ---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
              +               A+G     A S  +     + + EE
Sbjct: 150 GYQLYHTDASGNYSAWRAYAVGQNDQVAQSLLKRDWKPELTLEE 193


>gi|294673105|ref|YP_003573721.1| hypothetical protein PRU_0337 [Prevotella ruminicola 23]
 gi|294473271|gb|ADE82660.1| conserved hypothetical protein [Prevotella ruminicola 23]
          Length = 441

 Score = 36.1 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 16  TTILTVRKDGVVVIAGDGQVSL---GQ-TVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           T ++ +     + IA D  V++   G   V  +  + +R      +     GS++   T 
Sbjct: 2   TAVVGILNKRGIAIAADSAVTMTRDGNEKVENSANKMLRMSDACPVSVMIVGSASFLCTP 61

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYL 103
            + + ++  Q    +   +V+   D      L
Sbjct: 62  WDVIIRRYRQKRGNIQFPTVQACIDDFFSYML 93


>gi|195157690|ref|XP_002019729.1| GL12053 [Drosophila persimilis]
 gi|194116320|gb|EDW38363.1| GL12053 [Drosophila persimilis]
          Length = 181

 Score = 36.1 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 6/102 (5%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIA--GFAGSSADAFTLLER 74
           T + ++     V+A   +++  +T++  + + + R+         G  G S         
Sbjct: 36  TTVALKTKNAAVLATQKRIT-DKTIVPRSVKHLFRITPKIGCCMTGRIGDSHFQVRRSRN 94

Query: 75  LEKKLEQYPNQLLRS---SVELAKDWRMDKYLRNLEAMILIA 113
              K        + +      +A   ++      +  +    
Sbjct: 95  EASKFRYTCGYDVTAKALCERMADINQVYSQHPEIRPLGCSM 136


>gi|91076392|ref|XP_968727.1| PREDICTED: similar to proteasome 25 kDa subunit [Tribolium
           castaneum]
 gi|270002557|gb|EEZ99004.1| hypothetical protein TcasGA2_TC004868 [Tribolium castaneum]
          Length = 234

 Score = 36.1 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 43/157 (27%), Gaps = 9/157 (5%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERLEK 77
           + ++    VVIA + +         +  +        G I +G             ++ +
Sbjct: 36  VGIKACNGVVIATENKHKSILYDEHSVHKVEMITKHIGMIYSGMGPDYRLLVKQARKMAQ 95

Query: 78  KLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILI--ADKTITLVITGMGDVLE 129
           K            QL++    + +++     +R     +LI   D     +         
Sbjct: 96  KYFLTYREPIPTVQLVQRVAAVMQEYTQSGGVRPFGVSLLICGWDSGRPYLFQCDPSGAY 155

Query: 130 PENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 A+G       +      S     ++    A+
Sbjct: 156 FAWKATAMGKNYINGKTFLEKRYSEDLELDDAVHTAI 192


>gi|217072970|gb|ACJ84845.1| unknown [Medicago truncatula]
          Length = 174

 Score = 36.1 bits (82), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +        + RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGIDNVVLGVEKKSTAKLQ-DSRSVRKIVNLDDHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV 91
           R   + + +   +     
Sbjct: 87  RARVECQSHRLTVEDPCT 104


>gi|146216735|gb|ABQ10568.1| proteasome beta 9 subunit [Ailuropoda melanoleuca]
          Length = 49

 Score = 36.1 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 3/44 (6%)

Query: 133 GVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSIAADIC 173
                GSG +Y      A      S EE       A+++A +  
Sbjct: 2   PFAIGGSGSTYIYGYVDAAYKPGMSPEECRSFTTNAITLAMNRD 45


>gi|194467629|ref|ZP_03073616.1| 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Lactobacillus
           reuteri 100-23]
 gi|194454665|gb|EDX43562.1| 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Lactobacillus
           reuteri 100-23]
          Length = 283

 Score = 36.1 bits (82), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 14/76 (18%)

Query: 124 MGDVLEPENGV---MAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADI--CVY 175
            G  +  +  +     +G G S A +  RAL        S  E+A+ A++I +D+  C+Y
Sbjct: 84  DGVTIRIKKQIPVAAGLGGGSSDAAAVLRALNSIWRLDLSLSELAKIALTIDSDVPYCIY 143

Query: 176 ------TNHNIVLETL 185
                 T H   +E L
Sbjct: 144 NKLAHVTGHGEKIELL 159


>gi|328871197|gb|EGG19568.1| proteasome subunit beta type 2 [Dictyostelium fasciculatum]
          Length = 159

 Score = 36.1 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 26/112 (23%), Gaps = 9/112 (8%)

Query: 58  IAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRM------DKYLRNLEAMIL 111
           +   AG   D    +E + K  + Y  +   +    A               R     ++
Sbjct: 9   LIMSAGEHGDRSQFIEFVSKNCKLYNLRNGYALSTAATANFTRSELATALRSRPYNVNLI 68

Query: 112 IADKTITL---VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           IA         +          +      G    + L           S EE
Sbjct: 69  IAGYDKEHEGSIYYMDYLASMVKLDFACHGYAAYFLLGLLDRHHKKDMSFEE 120


>gi|167042745|gb|ABZ07465.1| putative Proteasome A-type and B-type [uncultured marine
           crenarchaeote HF4000_ANIW133O4]
          Length = 261

 Score = 36.1 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/170 (10%), Positives = 44/170 (25%), Gaps = 13/170 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
                + ++     VIA + + S    V     +  +     G   AG+   +       
Sbjct: 32  RGAIAIGLQAKDGAVIAVEEK-SRDLQVEDITQKIFQVDDHIGIAAAGYIPDARILIDNA 90

Query: 73  ERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITGM 124
               +  +           + +   + A  +     +R     +++A        +    
Sbjct: 91  RFFSQSNKLTYDESVEVGAVAKHLADQAHQFTQYSGVRPFGVALIVAGVDRKGARIFVTD 150

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
                     +AIG                +        +A  A+++ +D
Sbjct: 151 PSGTYVPYTAVAIGGNSDEVTDFLEKNYKKEMLMDDVMSLAISAINLKSD 200


>gi|300123907|emb|CBK25178.2| unnamed protein product [Blastocystis hominis]
 gi|300174996|emb|CBK20307.2| unnamed protein product [Blastocystis hominis]
          Length = 217

 Score = 36.1 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 45/154 (29%), Gaps = 13/154 (8%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + +     +    + ++          + KV  +    I+   AG ++DA  LL+   K 
Sbjct: 35  IGILTKEGIAFGIEKKIISKLLAKIGESEKVYAIDNH-IMCAVAGLTSDANILLQNARKN 93

Query: 79  LEQYPNQLLRS---------SVELAKDWRMDKYLRNLEAMILIADKTITL---VITGMGD 126
            ++Y  +  +             +   +     LR      L A         +      
Sbjct: 94  AQEYLYKYGQPKPVEELVEYICRIKHSYTQVGGLRPFGVSFLFAGWDKIHGYQLYHSDPS 153

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
                    AIGS  + A    +     + + EE
Sbjct: 154 GNFSGWKAHAIGSNSTLARDMLKKDYKEEMTLEE 187


>gi|256073227|ref|XP_002572933.1| proteasome subunit alpha 6 (T01 family) [Schistosoma mansoni]
 gi|238658101|emb|CAZ29165.1| proteasome subunit alpha 6 (T01 family) [Schistosoma mansoni]
          Length = 687

 Score = 36.1 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 27/168 (16%)

Query: 19  LTVRKDGVVVIAG-----DGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + VR +   V+A      D        + + +  ++ RL          G + D    ++
Sbjct: 41  VGVRGNDCAVVAAQLKLPDK------LIDRRSMTRIFRLTDSTGCI-MTGMAPDCRAQVQ 93

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMD-----------KYLRNLEAMILIADKT--ITLV 120
           R   +   + ++            R+                    + +  D+      +
Sbjct: 94  RARYEAASFKHKFGYEVPCDVLLHRIGEINQVYTQSAEMRPLGCAMLAISYDEELGKPQL 153

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST--QNSAEEIARKAM 166
                      +  +A+G   + A+             + EE    A+
Sbjct: 154 YKSDPSGFVAGHRAVAVGDKQTEAMRHLENEFRKQENYTLEEAVELAI 201


>gi|169786871|ref|YP_001705684.1| hypothetical protein p3ABSDF0008 [Acinetobacter baumannii SDF]
 gi|169150788|emb|CAP02982.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 246

 Score = 36.1 bits (82), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 39/118 (33%), Gaps = 10/118 (8%)

Query: 16  TTILTVRKDGVVVIAGDGQVSL-----GQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           T I++      ++IA D +        G   +  N ++  +L     IAG   +      
Sbjct: 2   TMIVSAHLGDCLLIAADKRAMFCDIETGDMRLFHNEKQKIKLWTLGAIAGTGETIFLNRI 61

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWRM-----DKYLRNLEAMILIADKTITLVITG 123
           +      K+E+         +    + R+      + L N   +  + D   + + + 
Sbjct: 62  MDYFSNFKVEENKELKQMDVIYKELENRLLEGVPKEMLINNTLIFSMFDGEQSHLYSI 119


>gi|268560948|ref|XP_002646328.1| C. briggsae CBR-PBS-4 protein [Caenorhabditis briggsae]
 gi|187029872|emb|CAP31082.1| CBR-PBS-4 protein [Caenorhabditis briggsae AF16]
          Length = 196

 Score = 36.1 bits (82), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 46/150 (30%), Gaps = 10/150 (6%)

Query: 19  LTVRKDGVVVIAGDGQVS--LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + +  +  V++A D   +   G  +  +   K  RLGK   +    G   D     +  +
Sbjct: 8   VGISTENYVILAADK-ATFAYGAILADSENDKEYRLGKKLTMMCI-GEEGDVAQFGDWTK 65

Query: 77  KKLEQYPNQLLRSSVELAKDW---RMDKYLRNLEAMILIADK--TITLVITGMG-DVLEP 130
           + L+ Y  +   +   + +        +    ++ +I   D       + +         
Sbjct: 66  RNLQLYSVRNASAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEEKAFLGSVDYLANGLA 125

Query: 131 ENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           +   +  G  G +  +          S  E
Sbjct: 126 QQPYLFRGFCGRFCYAIMDHEYKKDMSETE 155


>gi|62319253|dbj|BAD94476.1| hypothetical protein [Arabidopsis thaliana]
          Length = 117

 Score = 36.1 bits (82), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 102 YLRNLEAMILIA--DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS-- 157
             R     +LIA  D+    +          +    AIGSG   A S+ +   +   S  
Sbjct: 11  MSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQ 70

Query: 158 -AEEIARKAMSIAADICVYTNHNIVLET 184
            AE IA   +    +  V T +N+ +  
Sbjct: 71  EAETIAVSILKQVMEEKV-TPNNVDIAK 97


>gi|38047901|gb|AAR09853.1| similar to Drosophila melanogaster Pros35 [Drosophila yakuba]
          Length = 192

 Score = 36.1 bits (82), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 15/154 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++     V+    + +     + A  RK+  +     I+  AG +ADA  L   
Sbjct: 32  GTATVGLKNKETAVLVALCKPTSE---LSATQRKIIPIDDHLGIS-IAGLTADARVLSRY 87

Query: 75  LEKKLEQYPNQ------LLRSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +       + R    L         R D+    +  ++   D+    +   
Sbjct: 88  LRSECLNYKHSYDSTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
                       +IGS    A +     ++    
Sbjct: 148 TPSATFFNCKANSIGSRSQSARTYLEKKLNEFLD 181


>gi|146102131|ref|XP_001469290.1| proteasome alpha 1 subunit [Leishmania infantum]
 gi|5814087|gb|AAD52094.1|AF088882_1 20S proteasome alpha subunit [Leishmania donovani]
 gi|12054746|emb|CAC20615.1| proteasome alpha 1 subunit [Leishmania infantum]
 gi|134073659|emb|CAM72396.1| putative proteasome alpha 1 subunit [Leishmania infantum JPCM5]
 gi|322503304|emb|CBZ38389.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 250

 Score = 35.7 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 52/178 (29%), Gaps = 26/178 (14%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
            + +R    V++A   Q  +   +M+ ++         +I     G + D   L++R  +
Sbjct: 36  TIAIRCKDAVLVA--TQHVIPDRLMRPDSVTALYEVTPSIGCCMTGRAPDGRALVQRARE 93

Query: 78  KLEQYPNQLLRSSVELAKDWRM-----------DKYLRNLEAMILIADKTI------TLV 120
           +   Y  +            RM                 + +  +  D++         +
Sbjct: 94  EASDYHYRYGVQIPIAVLAKRMGDKAQVRTQQAGLRPMGVVSTFIGMDQSDQDGSLKPQI 153

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS-------TQNSAEEIARKAMSIAAD 171
            T         +   A+G     A++              TQ  A  IA  A+  A  
Sbjct: 154 YTVDPAGWTGGHIACAVGKKQVEAMAFLEKRQKSTKFDELTQKEAAMIALAALQSAIG 211


>gi|224110244|ref|XP_002333127.1| predicted protein [Populus trichocarpa]
 gi|222834938|gb|EEE73387.1| predicted protein [Populus trichocarpa]
          Length = 157

 Score = 35.7 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 43/139 (30%), Gaps = 19/139 (13%)

Query: 66  ADAFTLLERLEKKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA--D 114
            D   L+ +  K+ EQY           QL+R +  + +++     +R     +L+A  D
Sbjct: 3   PDFRVLVRKSRKQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGFD 62

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI-----A 169
                +               A+G   S A +      +     ++    A+        
Sbjct: 63  DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFE 122

Query: 170 ADICVYTNHNIVLETLKVG 188
             I   +  NI +  +   
Sbjct: 123 GQI---SGKNIEIGIIGAD 138


>gi|195560265|ref|XP_002077394.1| GD19047 [Drosophila simulans]
 gi|194202503|gb|EDX16079.1| GD19047 [Drosophila simulans]
          Length = 193

 Score = 35.7 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 23/180 (12%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +   ++ +    I+ ++    V++A D            N  ++  +           
Sbjct: 1   MMEYESSMSIEG-NIVGLKSTNAVILATDS-----------NEYEMYLIDDRIYCCAPRS 48

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSS-VELAKDWRMDKYLRNLEAMILIA--DKTITLV 120
                  L   +  K+EQ      ++  V   +D   DKY       +LIA  D     +
Sbjct: 49  GIDRKIILE--VSSKVEQLVRDRGQTVTVSQVRDMFCDKYQNAESPNVLIAGQDSKGLHL 106

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST--QNS-AEEIARKAMSIA-ADIC-VY 175
            +             A G+     +       S     S AE +ARKA+    A++C +Y
Sbjct: 107 FSMESGKSRM-VIYAAKGTDAENIVGILSHDWSDFINLSEAEHLARKALMCEDAEMCTIY 165


>gi|119491677|ref|XP_001263333.1| proteasome subunit alpha type [Neosartorya fischeri NRRL 181]
 gi|119411493|gb|EAW21436.1| proteasome subunit alpha type [Neosartorya fischeri NRRL 181]
          Length = 257

 Score = 35.7 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 14/155 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLER 74
           T + VR     V+    +V   + +  ++   + RL    G ++ G    +  +      
Sbjct: 39  TSIGVRGKNCAVVLSQKKV-ADKLIDPSSVSHIFRLSPSVGCVMTGSIADARASVDRARG 97

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITGM 124
              +   Y          LAK       +    A +           + D+    +    
Sbjct: 98  EAAEFR-YKYGYEMPCDVLAKRLANINQVYTQRAYMRPLGVAMTLISVDDEKGPQLYKCD 156

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE 159
                      A G     AL+     +  ++ AE
Sbjct: 157 PAGYYVGYKATASGPKQQEALNYLEKKLKNKDYAE 191


>gi|167044907|gb|ABZ09574.1| putative Proteasome A-type and B-type [uncultured marine
           crenarchaeote HF4000_APKG8D22]
          Length = 254

 Score = 35.7 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/170 (10%), Positives = 44/170 (25%), Gaps = 13/170 (7%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLL 72
                + ++     VIA + + S    V     +  +     G   AG+   +       
Sbjct: 32  RGAIAIGLQAKDGAVIAVEEK-SRDLQVEDITQKIFQVDDHIGIAAAGYIPDARILIDNA 90

Query: 73  ERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--VITGM 124
               +  +           + +   + A  +     +R     +++A        +    
Sbjct: 91  RFFSQSNKLTYDESVEVGAVAKHLADQAHQFTQYSGVRPFGVALIVAGVDRKGAKIFVTD 150

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
                     +AIG                +        +A  A+++ +D
Sbjct: 151 PSGTYVPYTAVAIGGNSDEVTDFLEKNYKKEMLMDDVMSLAISAINLKSD 200


>gi|238486816|ref|XP_002374646.1| proteasome component Prs2, putative [Aspergillus flavus NRRL3357]
 gi|220699525|gb|EED55864.1| proteasome component Prs2, putative [Aspergillus flavus NRRL3357]
          Length = 666

 Score = 35.7 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 42/155 (27%), Gaps = 14/155 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLER 74
           T L VR     V+    +V   + +  ++   + RL    G ++ G    +  +      
Sbjct: 448 TSLGVRGKNCAVVLSQKKV-ADKLIDPSSVSHIFRLSPSVGCVMTGSIADARASVDRARG 506

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTI-TLVITGM 124
              +   Y          LAK       +    A +         +  D      V    
Sbjct: 507 EAAEFR-YKYGYEMPCDVLAKRLANINQVYTQRAYMRPLGVAMTLISVDSENGPQVYKCD 565

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE 159
                      A G     A++     +  ++ AE
Sbjct: 566 PAGYYVGYKATASGPKQQEAITYLEKKLKNKDYAE 600


>gi|115396402|ref|XP_001213840.1| proteasome subunit alpha type 6 [Aspergillus terreus NIH2624]
 gi|114193409|gb|EAU35109.1| proteasome subunit alpha type 6 [Aspergillus terreus NIH2624]
          Length = 626

 Score = 35.7 bits (81), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 44/163 (26%), Gaps = 18/163 (11%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLER 74
           T L VR     V+    +V   + +  ++   V RL    G ++ G    +  +      
Sbjct: 408 TSLGVRGKNCAVVITQKKV-ADKLIDPSSVSHVFRLSPSVGCVMTGSIADARASVDRARG 466

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTI-TLVITGM 124
              +   Y          LAK       +    A +         +  D      +    
Sbjct: 467 EAAEFR-YKFGYEMPCDVLAKRLANINQVYTQRAYMRPLGVAMTLISVDSEKGPQLYKCD 525

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSA----EEIAR 163
                      A G     AL+     +  ++ A    EE+  
Sbjct: 526 PAGYYVGYKATASGPKQQEALNYLEKKLKNKDYADGNWEEVVE 568


>gi|224107733|ref|XP_002314582.1| predicted protein [Populus trichocarpa]
 gi|222863622|gb|EEF00753.1| predicted protein [Populus trichocarpa]
          Length = 110

 Score = 35.7 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/131 (9%), Positives = 33/131 (25%), Gaps = 25/131 (19%)

Query: 23  KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQY 82
            +  ++     +     TV   N  K+  +       G   ++                 
Sbjct: 2   GEDGIIPGAYTRAMFKSTVSDRNCEKIHNMAPDFYCCGAGTAADTEAVTG---------- 51

Query: 83  PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMAIGSGGS 142
                      +  W + KY  +++A ++                         + SG  
Sbjct: 52  ---------FQSGMWSLFKYHGHVQAGLVQTSLDHIY------TWGTETLPFSTMASGSL 96

Query: 143 YALSAARALMS 153
            A++   ++M 
Sbjct: 97  AAMAIFESVMK 107


>gi|308485256|ref|XP_003104827.1| CRE-PBS-4 protein [Caenorhabditis remanei]
 gi|308257525|gb|EFP01478.1| CRE-PBS-4 protein [Caenorhabditis remanei]
          Length = 204

 Score = 35.7 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 18/158 (11%)

Query: 19  LTVRKDGVVVIAGDGQVS--LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + +  +  V++A D   +   G  +  +   K  RLGK   +    G   D     +  +
Sbjct: 8   VGISTENYVILAADK-ATFAYGAILADSENDKEYRLGKKLTMMCI-GEEGDVAQFGDWTK 65

Query: 77  KKLEQYPNQLLRSSVELAKDW---------RMDKYLRNLEAMILIADK--TITLVITGMG 125
           + L+ Y  +                        K    ++ +I   D       + +   
Sbjct: 66  RNLQLYSVRNGYEVSPACAHHFVRRSIAEGLRSKDHYTVDVLIGGYDDKEEKAFLGSVDY 125

Query: 126 ---DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
               + +     +  G  G +  +          S  E
Sbjct: 126 LANGLAQQVFPYLFRGFCGRFCYAIMDREYKKDMSEAE 163


>gi|309799891|ref|ZP_07694096.1| conserved hypothetical protein [Streptococcus infantis SK1302]
 gi|308116481|gb|EFO53952.1| conserved hypothetical protein [Streptococcus infantis SK1302]
          Length = 204

 Score = 35.7 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 4/58 (6%)

Query: 18 ILTVRKDGVVVIAGDGQVS--LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
          ++        +I+GD ++S   G+TV     +  +     N++ GF GS      L +
Sbjct: 4  VIGTVFKNFAIISGDTRLSKDSGETVSDTYTKVFKV--NQNVLVGFTGSGNAVDVLNK 59


>gi|304393788|ref|ZP_07375713.1| T1A family peptidase [Ahrensia sp. R2A130]
 gi|303293987|gb|EFL88362.1| T1A family peptidase [Ahrensia sp. R2A130]
          Length = 265

 Score = 35.7 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 52/176 (29%), Gaps = 29/176 (16%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  + +R +  +V   D + + G     M          G+  I    AG+ A   +L+ 
Sbjct: 2   TYCVGLRLNRGLVFMSDTRTNAGVDNFSMTKKMFTFEVPGERVITILTAGNLATTQSLIS 61

Query: 74  RLEKKLEQYP-------------------NQLLRSSVELAKDWRMDKYLRNLEAMILIAD 114
            LE++ + +                     + LR  +E        K      A +++  
Sbjct: 62  LLEERSKAHDERDPSILHEPSMFQVAERIGETLREVIEKTNGNNGQKAQSKFRASLIVGG 121

Query: 115 KTIT-----LVITGMGDVLE--PENGVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
           +         +I   G+ +E   E     IG    Y             S E   +
Sbjct: 122 QMKGGDPTLFLIYPEGNFVEVTMETPFFQIGEAK-YGKPILVRAYDPDMSFEAAIK 176


>gi|159127507|gb|EDP52622.1| proteasome component Prs2, putative [Aspergillus fumigatus A1163]
          Length = 258

 Score = 35.7 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 14/155 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLER 74
           T + VR     V+    +V   + +  ++   + RL    G ++ G    +  +      
Sbjct: 40  TSIGVRGKNCAVVLSQKKV-ADKLIDPSSVSHIFRLSPSVGCVMTGSIADARASVDRARG 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITGM 124
              +   Y          LAK       +    A +           + D+    +    
Sbjct: 99  EAAEFR-YKYGYEMPCDVLAKRLANINQVYTQRAYMRPLGVAMTLISVDDEKGPQLYKCD 157

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE 159
                      A G     AL+     +  ++ AE
Sbjct: 158 PAGYYVGYKATASGPKQQEALNYLEKKLKNKDYAE 192


>gi|297607192|ref|NP_001059598.2| Os07g0468800 [Oryza sativa Japonica Group]
 gi|255677751|dbj|BAF21512.2| Os07g0468800 [Oryza sativa Japonica Group]
          Length = 207

 Score = 35.7 bits (81), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 3/99 (3%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A + L V     VV+ G+ +V+        +A K+ ++       +AG    +      
Sbjct: 81  NAGSALCVLAADGVVLVGEKKVTSKLLQTSCSAEKMYKIDSHLACAVAGIMSDANILLNT 140

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
              L  +      Q      +L +     K        +
Sbjct: 141 AR-LHAQRYILSYQEPIPVEQLIQSLCHTKQGYTQFGGL 178


>gi|167536602|ref|XP_001749972.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771482|gb|EDQ85147.1| predicted protein [Monosiga brevicollis MX1]
          Length = 246

 Score = 35.7 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 44/162 (27%), Gaps = 12/162 (7%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + +R     V+    +V     V        +     G ++ G    +          
Sbjct: 38  TSIGIRGKDCAVVVTQKKVPDKLIVADTVTHMFKITPHIGCVMTGMIADARHQVRRARYE 97

Query: 76  EKK------LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTI---TLVITGMGD 126
             +       E  P+QL +   +L++    +  LR L   +++          +      
Sbjct: 98  AAEWKYKFGYEIPPDQLAKRVADLSQLNTQEASLRPLGCSMILVGIDEERGPQLFKSDPA 157

Query: 127 VLEPENGVMAIGSGGSYALSAARALM--STQNSAEEIARKAM 166
                    A G     A +     M  +   +      +A+
Sbjct: 158 GYYVGYKACAAGVKMVEANNLLEKKMKKNPDLAGVRCIEEAI 199


>gi|145500666|ref|XP_001436316.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145526627|ref|XP_001449119.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403455|emb|CAK68919.1| unnamed protein product [Paramecium tetraurelia]
 gi|124416696|emb|CAK81722.1| unnamed protein product [Paramecium tetraurelia]
          Length = 245

 Score = 35.7 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 46/161 (28%), Gaps = 12/161 (7%)

Query: 8   HYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNII--AGFAGSS 65
             AVK    T + V+    V +  + +V   + + + +   +  + +       G    +
Sbjct: 28  FKAVKTSGLTSIGVKGTDTVCLITEKRV-PDKLIDEKSVTNLFNVSEKIGALTTGIPSDA 86

Query: 66  ADAFTLLERLEKKLEQYPN------QLLRSSVELAKDWRMDKYLRNLEAMILIA---DKT 116
               T +     +             L +   +LA+       +R+     ++    D+ 
Sbjct: 87  RALVTRMRYEAGEFRLKNGYYCPVDVLSKRMADLAQTNTQYYQMRSYGVETILCQYDDEL 146

Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS 157
             L+               A G     A++     +  +  
Sbjct: 147 GPLLYKLDPSGHYSGYKATASGVKEQEAINYLEKQIKKKAD 187


>gi|218193366|gb|EEC75793.1| hypothetical protein OsI_12722 [Oryza sativa Indica Group]
          Length = 65

 Score = 35.7 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 5/23 (21%), Positives = 13/23 (56%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSL 37
           +T + ++    VV+A + +V+ 
Sbjct: 34 GSTAIGLKTKDGVVLAVEKRVTS 56


>gi|123448319|ref|XP_001312891.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
 gi|121894754|gb|EAX99961.1| Family T1, proteasome alpha subunit, threonine peptidase
           [Trichomonas vaginalis G3]
          Length = 241

 Score = 35.7 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 34/145 (23%), Gaps = 2/145 (1%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK-GNIIAGFAGSSADAFTLLERL 75
           T + V+    V +A   +VS             R     G  + G          LL   
Sbjct: 34  TAVAVKSKNAVCVAVQKKVSDKLIDPSTVTHMYRITDNVGACLVGLPSDVNFIVMLLRSF 93

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVM 135
               E Y          LA+       L +    +  +  +  L              + 
Sbjct: 94  ANNFE-YKQGFSIPVSILAQMLSERHQLESQLVYVRPSAVSAILFGLDGPSDSFALYKIE 152

Query: 136 AIGSGGSYALSAARALMSTQNSAEE 160
             G    +   A         SA E
Sbjct: 153 PSGYSNGFRAVACGVKEIEAMSALE 177


>gi|330791440|ref|XP_003283801.1| hypothetical protein DICPUDRAFT_74767 [Dictyostelium purpureum]
 gi|325086300|gb|EGC39692.1| hypothetical protein DICPUDRAFT_74767 [Dictyostelium purpureum]
          Length = 207

 Score = 35.3 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/157 (10%), Positives = 44/157 (28%), Gaps = 24/157 (15%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + ++ +  V+IA +         +  + +++  +    ++    G++     L +   + 
Sbjct: 11  IGIQCEEGVIIATE---------VSKDHQRLFEIDDN-LMCSIIGTNDPRDILDKARTEA 60

Query: 79  LEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL-------------IADKTITLVITGMG 125
           L              +    ++  L       L                     +     
Sbjct: 61  LNHRGINNKIPMNVESCVKTINNLLLKSNEDGLSHGASVLVGGIDEQNGSLFPSLYYIDP 120

Query: 126 DVLEPE-NGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                +    +  G G   A S  +A  ST+ S +E 
Sbjct: 121 SGAYNQVQSKVIGGKGYEGAQSILQANYSTKLSLKEC 157


>gi|70999540|ref|XP_754489.1| proteasome component Prs2 [Aspergillus fumigatus Af293]
 gi|66852126|gb|EAL92451.1| proteasome component Prs2, putative [Aspergillus fumigatus Af293]
          Length = 258

 Score = 35.3 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 14/155 (9%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLER 74
           T + VR     V+    +V   + +  ++   + RL    G ++ G    +  +      
Sbjct: 40  TSIGVRGKNCAVVLSQKKV-ADKLIDPSSVSHIFRLSPSVGCVMTGSIADARASVDRARG 98

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI----------LIADKTITLVITGM 124
              +   Y          LAK       +    A +           + D+    +    
Sbjct: 99  EAAEFR-YKYGYEMPCDVLAKRLANINQVYTQRAYMRPLGVAMTLISVDDEKGPQLYKCD 157

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSAE 159
                      A G     AL+     +  ++ AE
Sbjct: 158 PAGYYVGYKATASGPKQQEALNYLEKKLKNKDYAE 192


>gi|320163063|gb|EFW39962.1| proteasome beta 2 subunit [Capsaspora owczarzaki ATCC 30864]
          Length = 199

 Score = 35.3 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 56/168 (33%), Gaps = 17/168 (10%)

Query: 18  ILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEK 77
           I+ +     VV A D   +    VMK++  K+ ++    +     G S D     E ++K
Sbjct: 4   IIAISGKDFVVAAADAMAARSIVVMKSDHEKMVQMSPHLLQVC-NGPSGDVVQFSEFIQK 62

Query: 78  KLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILI-------ADKTITLVITGMGD 126
            ++ Y  +   +    A        + + LR+  A  +               +      
Sbjct: 63  NIKLYQMRNGFALSPHAAAHYTRDQLARALRSSGAYQVNLLLAGYDTINKQAELYFMDYL 122

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICV 174
               +    A G    + LS      + + + +E A + M     +C+
Sbjct: 123 AALVKVPFGAHGYASHFVLSLLDRYYTPEVTLDE-ALRLMK----MCI 165


>gi|17380193|sp|P91477|PSB2_CAEEL RecName: Full=Proteasome subunit beta type-2; AltName:
           Full=Proteasome subunit beta 4
          Length = 199

 Score = 35.3 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 46/160 (28%), Gaps = 24/160 (15%)

Query: 19  LTVRKDGVVVIAGDGQVS--LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + +  +  V++A D   +   G  +  +   K  RLGK   +    G   D     +  +
Sbjct: 5   VGISTENYVILAADK-ATFAYGAILADSENDKEYRLGKKLTMMCI-GEEGDVAQFGDWTK 62

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMA 136
           + L+ Y  +                ++R   A  L +    T+ +   G   + +   + 
Sbjct: 63  RNLQLYSVRNGYEVSPSCAH----HFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLG 118

Query: 137 I----------------GSGGSYALSAARALMSTQNSAEE 160
                            G  G +  +          +  E
Sbjct: 119 SVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAE 158


>gi|297790070|ref|XP_002862946.1| hypothetical protein ARALYDRAFT_920955 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308728|gb|EFH39205.1| hypothetical protein ARALYDRAFT_920955 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 116

 Score = 35.3 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/97 (11%), Positives = 29/97 (29%)

Query: 20  TVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKL 79
            +       IA D +  +    +    R ++     ++++           L + +  +L
Sbjct: 18  AMEGKNCFAIASDQRHGVQLQTILREERDIKPETFASLVSAILYEKRFGPYLCQLVIAEL 77

Query: 80  EQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKT 116
                    +   +A  +    YL +L   I+     
Sbjct: 78  RDDNKPFTCTMDSIAAKYAHFLYLPSLLLFIIFIYND 114


>gi|295671012|ref|XP_002796053.1| proteasome component C7-alpha [Paracoccidioides brasiliensis Pb01]
 gi|226284186|gb|EEH39752.1| proteasome component C7-alpha [Paracoccidioides brasiliensis Pb01]
          Length = 328

 Score = 35.3 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 46/168 (27%), Gaps = 18/168 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLER 74
           T L ++     V+    +V   + +  ++   + +L    G ++ G    +  + +  + 
Sbjct: 36  TSLGIKGKDCAVVLSQKKV-PDKLIDPSSVTHIFQLSPSVGCVMTGSIADARASVSRAQS 94

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKT-ITLVITGM 124
              +   Y          LAK       +    A +         +  D      +    
Sbjct: 95  EAAEFR-YKFGYEMPCDVLAKRLANINQVYTQRAYMRPLGVAITLVSVDSELGPQLYKCD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSA----EEIARKAMSI 168
                      A G       +     +  +  A    E++   A+S 
Sbjct: 154 PAGYYVGYRATASGPKQQDIFNHLEKKLKNKEHAEGTWEDVVELAIST 201


>gi|332248604|ref|XP_003273454.1| PREDICTED: proteasome subunit beta type-2-like isoform 3 [Nomascus
           leucogenys]
 gi|332808416|ref|XP_003308024.1| PREDICTED: proteasome subunit beta type-2 isoform 3 [Pan
           troglodytes]
          Length = 167

 Score = 35.3 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 37/125 (29%), Gaps = 13/125 (10%)

Query: 56  NIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL---------RNL 106
            I+    G + D     E ++K ++ Y  +        A      + L          ++
Sbjct: 7   KILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHV 66

Query: 107 EAMILIADK-TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIA 162
             ++   D+     +          +    A G G    LS      +   S   A E+ 
Sbjct: 67  NLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELL 126

Query: 163 RKAMS 167
           RK + 
Sbjct: 127 RKCLE 131


>gi|73696578|gb|AAZ81009.1| proteasome subunit, beta type 6 [Macaca mulatta]
          Length = 76

 Score = 35.3 bits (80), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 122 TGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIAR---KAMSIAADICVYTNH 178
           +     +         GSG SY      A      + EE  +    A+++A +    +  
Sbjct: 1   SVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGG 60

Query: 179 NIVLETL 185
            I L  +
Sbjct: 61  VIRLAAI 67


>gi|56750521|ref|YP_171222.1| hypothetical protein syc0512_d [Synechococcus elongatus PCC 6301]
 gi|56685480|dbj|BAD78702.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 264

 Score = 35.3 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 26/176 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLLE 73
           T  L +     +++A D + + G   +    +       G   I+   +G+ +    +L 
Sbjct: 2   TYCLGIVTQAGLIMAADSRTNAGIDYISTYQKLFDFSLPGDRTIVICCSGNLSITQAVLS 61

Query: 74  RLE-----------------KKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILI 112
           +L                    L +Y  Q +R   E  +DW     +D Y   L    + 
Sbjct: 62  QLRRDLAGHFDINLHSLPTMYDLARYLGQKVRQLQESDRDWLKQDGIDFYCNFLLGGQIR 121

Query: 113 ADKTITLVITGMGDVL--EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  ++ G G+ +   PE   + IG    Y        +S   S +  A+ A+
Sbjct: 122 GGPIELYLVYGQGNCIHATPETPYLQIGETK-YGKPILDRTISFDTSLDMAAKCAL 176


>gi|194466249|gb|ACF74355.1| multicatalytic endopeptidase [Arachis hypogaea]
          Length = 137

 Score = 35.3 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 2/78 (2%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
                + VR    VV+  + + +          RK+  L     +A  AG  ADA  L+ 
Sbjct: 29  KGNAAVGVRGTDNVVLGVEKKSTAKLQ-DSRTVRKIVNLDDHIALAC-AGLKADARVLIN 86

Query: 74  RLEKKLEQYPNQLLRSSV 91
           R   + + +   +     
Sbjct: 87  RARVECQSHRLTVEDPVT 104


>gi|81299844|ref|YP_400052.1| putative proteasome-type protease [Synechococcus elongatus PCC
           7942]
 gi|81168725|gb|ABB57065.1| putative proteasome-type protease [Synechococcus elongatus PCC
           7942]
          Length = 264

 Score = 35.3 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 26/176 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRL--GKGNIIAGFAGSSADAFTLLE 73
           T  L +     +++A D + + G   +    +       G   I+   +G+ +    +L 
Sbjct: 2   TYCLGIVTQAGLIMAADSRTNAGIDYISTYQKLFDFSLPGDRTIVICCSGNLSITQAVLS 61

Query: 74  RLE-----------------KKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILI 112
           +L                    L +Y  Q +R   E  +DW     +D Y   L    + 
Sbjct: 62  QLRRDLAGHSDINLHSLPTMYDLARYLGQKVRQLQESDRDWLKQDGIDFYCNFLLGGQIR 121

Query: 113 ADKTITLVITGMGDVL--EPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                  ++ G G+ +   PE   + IG    Y        +S   S +  A+ A+
Sbjct: 122 GGPIELYLVYGQGNCIHATPETPYLQIGETK-YGKPILDRTISFDTSLDMAAKCAL 176


>gi|221219958|gb|ACM08640.1| Proteasome subunit alpha type-6 [Salmo salar]
          Length = 246

 Score = 35.3 bits (80), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 43/190 (22%), Gaps = 16/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + VR     V+    +V              R       +     + + +     R
Sbjct: 36  GLTSVAVRGKDCAVVVTQKKVPDKPLDASTVTHLFRITENIGCVMSGMTADSKSQVQRAR 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTI-TLVITGM 124
            E    +Y          L K       +    A +         +  D+     V    
Sbjct: 96  YEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMIVIGVDEECGPQVYKCD 155

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSIAADICVYTNHN 179
                      A G   + A S     +  +         E A   +S    I  +    
Sbjct: 156 PAGYYCGFKATAAGVKQTEATSFLEKKVKKKLDWTFKETVETAITCLSTVLSID-FKPSE 214

Query: 180 IVLETLKVGD 189
           + +  +   D
Sbjct: 215 LEIGVITTED 224


>gi|2511568|emb|CAA73616.1| multicatalytic endopeptidase [Arabidopsis thaliana]
 gi|3421107|gb|AAC32068.1| 20S proteasome beta subunit PBC1 [Arabidopsis thaliana]
          Length = 70

 Score = 35.3 bits (80), Expect = 4.4,   Method: Composition-based stats.
 Identities = 3/41 (7%), Positives = 16/41 (39%)

Query: 9  YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKV 49
             + + + ++ +       IA D ++ +    +  + + +
Sbjct: 2  SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQNL 42


>gi|227891844|ref|ZP_04009649.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Lactobacillus
           salivarius ATCC 11741]
 gi|227866307|gb|EEJ73728.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Lactobacillus
           salivarius ATCC 11741]
          Length = 289

 Score = 35.3 bits (80), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)

Query: 120 VITGMGDVLEPENGV---MAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADI- 172
           +    G  +E +  +     +G G + A +  R L    +   S EE+A+ A++I +D+ 
Sbjct: 80  LDKPEGVEIEIDKHIPVSAGMGGGSADAAAVLRGLNKIWNLNMSREELAKLALTIDSDVP 139

Query: 173 -CVYT 176
            CVY+
Sbjct: 140 FCVYS 144


>gi|218438241|ref|YP_002376570.1| 20S proteasome A and subunit betas [Cyanothece sp. PCC 7424]
 gi|218170969|gb|ACK69702.1| 20S proteasome A and B subunits [Cyanothece sp. PCC 7424]
          Length = 255

 Score = 35.3 bits (80), Expect = 4.5,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 29/192 (15%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  L +     +V+AGD + + G   T            G   I+   +G+ +    +L 
Sbjct: 2   TYCLGIINRFGIVMAGDSRTNAGVEYTSAYRKLFDFSLPGDRIIVICSSGNLSVTQGVLT 61

Query: 74  RLEKKLE-----------------QYPNQLLRSSVELAKDWR-MDKYLRNLEAMI-LIAD 114
            L++ L+                  Y     R   +  + W   DK       ++     
Sbjct: 62  ELQRDLQNQEQTSLYTLSSMYDVAHYIGSKSRQIQDRDRPWLERDKISYQCNFLLGGQIK 121

Query: 115 KTITLVITGMGDVLEP----ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAA 170
             +  +              E   + IG    Y        ++     E +A+ A+    
Sbjct: 122 GEVPQLYMIYPQGNYIQATKETPFLQIGE-MKYGKPLLDRTITYDTPLEAMAKCALLS-- 178

Query: 171 DICVYTNHNIVL 182
            I      NI +
Sbjct: 179 -IDSTMKSNISV 189


>gi|90961216|ref|YP_535132.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Lactobacillus
           salivarius UCC118]
 gi|122449370|sp|Q1WV68|ISPE_LACS1 RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;
           Short=CMK; AltName:
           Full=4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase
 gi|90820410|gb|ABD99049.1| 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Lactobacillus
           salivarius UCC118]
          Length = 289

 Score = 35.3 bits (80), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)

Query: 120 VITGMGDVLEPENGV---MAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADI- 172
           +    G  +E +  +     +G G + A +  R L    +   S EE+A+ A++I +D+ 
Sbjct: 80  LDKPEGVEIEIDKHIPVSAGMGGGSADAAAVLRGLNKIWNLNMSREELAKLALTIDSDVP 139

Query: 173 -CVYT 176
            CVY+
Sbjct: 140 FCVYS 144


>gi|85000527|ref|XP_954982.1| proteasome subnit [Theileria annulata strain Ankara]
 gi|65303128|emb|CAI75506.1| proteasome subnit, putative [Theileria annulata]
          Length = 256

 Score = 35.3 bits (80), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 47/176 (26%), Gaps = 22/176 (12%)

Query: 17  TILTVRKDGVVVIAGDGQVS-------LGQTVMKANARKVRRLGK--GNIIAG-FAGSSA 66
           T + V     +V A D               +    A +V  + +  G ++AG    +  
Sbjct: 36  TAIAVVFSDGIVFAADSLACGTQDDSPYANVLQAKPAWRVFAIDEQIGAVVAGLLPDAKC 95

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
                 E  +   ++Y  +     +       +  Y              +  +     +
Sbjct: 96  VIKRAQEECKSFFKEYGTKPPVRIIAERIALFVHAYTLYWHVRPFGVSILLAGINNNTLN 155

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI---------ARKAMSIAADIC 173
            ++ +       +G  Y             +  EI          ++++    DIC
Sbjct: 156 WIDVDELYCIESNGACYKYGGMAIGKGKHIAKTEIEKLNLKEKKCKESLK---DIC 208


>gi|195505362|ref|XP_002099471.1| GE23336 [Drosophila yakuba]
 gi|194185572|gb|EDW99183.1| GE23336 [Drosophila yakuba]
          Length = 253

 Score = 35.3 bits (80), Expect = 4.6,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 53/169 (31%), Gaps = 21/169 (12%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           T L +     V++A + +           A ++ RL + N      G++AD   L   L 
Sbjct: 33  TCLGILAHNGVLLATE-RSVDKLLDSSIPAPRICRLNEDNACCA-TGNTADGNVLTTELR 90

Query: 77  KKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL---VITGM 124
              +QY           QL+ +  ++ + +      R     +L           +    
Sbjct: 91  LIAQQYACTFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSLLYMGWDCRFGFQLYQSD 150

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQ-------NSAEEIARKAM 166
                       IG     A+   +  + T+         A+++A K M
Sbjct: 151 PSGNYSGWKATCIGRHSGAAMELLQKELFTKGYVCPSLEEAKDVAIKVM 199


>gi|195455086|ref|XP_002074550.1| GK23128 [Drosophila willistoni]
 gi|194170635|gb|EDW85536.1| GK23128 [Drosophila willistoni]
          Length = 249

 Score = 35.3 bits (80), Expect = 4.6,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 17/167 (10%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
            T  + ++     V+     +    + + A+ RK+  +     I+  AG +ADA  L + 
Sbjct: 31  GTATVGLKNKSHAVLVA---LCKPLSELSASQRKIIPIDDHLGIS-IAGITADARVLSKW 86

Query: 75  LEKKLEQYPNQLL------RSSVELAKDW-----RMDKYLRNLEAMILIADKTITLVITG 123
           L  +   Y +         R    L         R D+    +  ++   D+    +   
Sbjct: 87  LRSECLNYKHSYESIYPISRLITNLGNKMQTTTQRYDRRPFGVGLLVAGYDENGPHIYQV 146

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
           +          M+IGS    A +     +S     + +EI    ++ 
Sbjct: 147 VPSANYINCKAMSIGSRSQSARTYLERHLSSFNDCTTDEIICHGINA 193


>gi|167472827|gb|ABZ81033.1| proteasome alpha 3 subunit [Clonorchis sinensis]
          Length = 179

 Score = 35.0 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 19/132 (14%)

Query: 56  NIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAM------ 109
            ++ GF     DA  L+    ++   +     +     +   R+  Y+            
Sbjct: 1   MVVVGFQ---VDAKALVNVAREECSNFKENFGKPIPLYSLVERIGMYMHAHTLYSAIRPF 57

Query: 110 -----ILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                +   ++    +       L       AIG     A +    L  T+ S+ ++ ++
Sbjct: 58  GVSLLLGSYEEDGPHLYVVEPSGLSFAYRGCAIGKAKQNATTEIEKLKPTELSSNDLVKE 117

Query: 165 AMSIAADICVYT 176
           A  I     +YT
Sbjct: 118 AAKI-----IYT 124


>gi|42600873|gb|AAS21213.1| proteasome subunit beta type 3 [Sus scrofa]
          Length = 41

 Score = 35.0 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 17/40 (42%)

Query: 9  YAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARK 48
            +  +   ++ ++    V IA D +  +   ++  + +K
Sbjct: 2  SIMSYNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDLQK 41


>gi|302833389|ref|XP_002948258.1| 20S proteasome alpha subunit C [Volvox carteri f. nagariensis]
 gi|300266478|gb|EFJ50665.1| 20S proteasome alpha subunit C [Volvox carteri f. nagariensis]
          Length = 253

 Score = 35.0 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 45/161 (27%), Gaps = 14/161 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLG----QTVMKANARKVRRLGK-GNIIAGFAGSSADA 68
           +A   + +     +V+  + +++        V     +  R        +AG    +   
Sbjct: 30  NAGASIGLLAKDGIVLVAEKKITSKLLDTHAVGVRREKMYRIDNHIACSVAGITADANIL 89

Query: 69  FTLLERLEKKLEQYP------NQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITL--- 119
             +     ++            QL+R+  +  + +      R     IL A         
Sbjct: 90  LNICRLAAQRYLFAYQEPMPVEQLVRNVCDTKQGYTQFGGQRPFGVSILYAGWDEHYGFQ 149

Query: 120 VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE 160
           +              +AIG+G   A +  ++         E
Sbjct: 150 LYQSDPSGNYGGWKAVAIGAGHQAANNLLKSDFKEDLPMSE 190


>gi|301299610|ref|ZP_07205871.1| 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852797|gb|EFK80420.1| 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 289

 Score = 35.0 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)

Query: 120 VITGMGDVLEPENGV---MAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADI- 172
           +    G  +E +  +     +G G + A +  R L    +   S EE+A+ A++I +D+ 
Sbjct: 80  LDKPEGVEIEIDKHIPVSAGMGGGSADAAAVLRGLNKIWNLNMSREELAKLALTIDSDVP 139

Query: 173 -CVYT 176
            CVY+
Sbjct: 140 FCVYS 144


>gi|167624655|ref|YP_001674949.1| phosphate acetyltransferase [Shewanella halifaxensis HAW-EB4]
 gi|167354677|gb|ABZ77290.1| phosphate acetyltransferase [Shewanella halifaxensis HAW-EB4]
          Length = 716

 Score = 35.0 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 54/181 (29%), Gaps = 26/181 (14%)

Query: 2   VVMGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGF 61
           VV+ + +    + A TI   R     ++ GD               ++ R+     +   
Sbjct: 406 VVLPEGNEPRTIEAATICAQRGIAKCILLGDK-------------EEITRIAAQKGLTLG 452

Query: 62  AGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKY-LRNLEAMILIADKTITLV 120
            G        +     +      +    +  +AK+   D   L  +       D  ++  
Sbjct: 453 DGVVIVEPHAVREQYIEPMLALRRHKGLTEVVAKEQLKDNMVLGTMMVAQGEVDGIVSGA 512

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAA------------RALMSTQNSAEEIARKAMSI 168
           +    + + P   ++    G +   S                 ++   SAE++A  A+  
Sbjct: 513 VNTTANTIRPPLQLIKTAPGSNLVSSIFFMLMPEQVLVYGDCAINPDPSAEQLADIAIQS 572

Query: 169 A 169
           A
Sbjct: 573 A 573


>gi|72386499|ref|XP_843674.1| proteasome alpha 7 subunit [Trypanosoma brucei]
 gi|9622228|gb|AAF89683.1|AF169651_1 20S proteasome alpha 7 subunit [Trypanosoma brucei]
 gi|62175778|gb|AAX69906.1| proteasome alpha 7 subunit [Trypanosoma brucei]
 gi|70800206|gb|AAZ10115.1| proteasome alpha 7 subunit [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|261326728|emb|CBH09701.1| proteasome alpha 7 subunit [Trypanosoma brucei gambiense DAL972]
          Length = 237

 Score = 35.0 bits (79), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/162 (11%), Positives = 49/162 (30%), Gaps = 13/162 (8%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           + +T +       VV+A +  ++  + + + +  ++  + +   I    G   D   ++ 
Sbjct: 31  NGSTAVAACCKDGVVVAVEKILTS-RMLEEGSNNRIHAVDRQAGIC-VCGVLPDGLAVVS 88

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYL-----------RNLEAMILIADKTITLVIT 122
           R   + E   +      +      R+ +++                +I         +  
Sbjct: 89  RARGEAENSRDIFSTPILGSLLASRIGEFMHVYTTHYAYRPFGCSVIIASYADDGPQLYV 148

Query: 123 GMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
                       +A+G G + A +    L     +  E   K
Sbjct: 149 ADPSGAVAGYYGIALGKGKTVAKTELEKLDFATLTCSEAVEK 190


>gi|195472542|ref|XP_002088559.1| GE18630 [Drosophila yakuba]
 gi|194174660|gb|EDW88271.1| GE18630 [Drosophila yakuba]
          Length = 289

 Score = 35.0 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 15/151 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
               + ++     V+A   + S          ++      G++    AG +ADA  + + 
Sbjct: 32  GAATVGLKSADYAVLAALCRTSKD----TDTLQRKIMPVDGHVGMSIAGLTADARLVCQY 87

Query: 75  LEKKL--EQYPNQLLRSSVEL---------AKDWRMDKYLRNLEAMILIADKTITLVITG 123
           +  +    ++          L         A   R D+    +  ++   D+    +   
Sbjct: 88  MRTECMAYRHSYDTEFPIRRLVANLGNKLQATTQRYDRRPYGVGMLVAGYDEQGPHIFQV 147

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMST 154
           M          MAIGS    A +     M +
Sbjct: 148 MPTANVLNCKAMAIGSRSQSARTYLERNMES 178


>gi|149410335|ref|XP_001511492.1| PREDICTED: similar to prosomal P27K protein [Ornithorhynchus
           anatinus]
          Length = 246

 Score = 35.0 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 37/165 (22%), Gaps = 12/165 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + VR     VI    +V              R       +     + + +     R
Sbjct: 36  GLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFRITENIGCVMTGMTADSKSQVQRAR 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTI-TLVITGM 124
            E    +Y          L K       +              +++  D+     V    
Sbjct: 96  YEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGVDEEHGPQVYKCD 155

Query: 125 GDVLEPENGVMAIGSGGSYALSAARA--LMSTQNSAEEIARKAMS 167
                      A G   + + S            + E+    A++
Sbjct: 156 PAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAIT 200


>gi|17508497|ref|NP_491261.1| Proteasome Beta Subunit family member (pbs-4) [Caenorhabditis
           elegans]
 gi|1703615|gb|AAB37663.1| Proteasome beta subunit protein 4, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 202

 Score = 35.0 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 46/160 (28%), Gaps = 24/160 (15%)

Query: 19  LTVRKDGVVVIAGDGQVS--LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + +  +  V++A D   +   G  +  +   K  RLGK   +    G   D     +  +
Sbjct: 8   VGISTENYVILAADK-ATFAYGAILADSENDKEYRLGKKLTMMCI-GEEGDVAQFGDWTK 65

Query: 77  KKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGVMA 136
           + L+ Y  +                ++R   A  L +    T+ +   G   + +   + 
Sbjct: 66  RNLQLYSVRNGYEVSPSCAH----HFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLG 121

Query: 137 I----------------GSGGSYALSAARALMSTQNSAEE 160
                            G  G +  +          +  E
Sbjct: 122 SVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAE 161


>gi|71747582|ref|XP_822846.1| proteasome subunit alpha 1 [Trypanosoma brucei TREU927]
 gi|70832514|gb|EAN78018.1| proteasome alpha 1 subunit, putative [Trypanosoma brucei]
          Length = 266

 Score = 35.0 bits (79), Expect = 4.9,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 20/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQ--VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + +  + V+    VV+    +  VS     + +   K  +L +   +A  +G  AD   L
Sbjct: 31  NGSAAVGVKGADYVVLTALKRNPVSG----LSSYQEKAFKLDEHVGMA-ISGLVADGRAL 85

Query: 72  LERLEKKL--EQYPNQLLRSSVELAKD---------WRMDKYLRNLEAMILIADKTITLV 120
              L  +    +Y +      V LA               K    +  +I   D+    +
Sbjct: 86  SRFLRTECMNYRYMHDSDAPLVMLADMVGAKHQRHIQFAGKRPFGVGLLIAGYDRQGPRL 145

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
              +      +    A+G     A +              +E+   A+  
Sbjct: 146 YQTVPSGDVFDFKATAMGLRSQAARTYLERHFRGFPACDLDELVMHALRA 195


>gi|125600168|gb|EAZ39744.1| hypothetical protein OsJ_24182 [Oryza sativa Japonica Group]
          Length = 186

 Score = 35.0 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 3/99 (3%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSADAFTL 71
           +A + L V     VV+ G+ +V+        +A K+ ++       +AG    +      
Sbjct: 30  NAGSALCVLAADGVVLVGEKKVTSKLLQTSCSAEKMYKIDSHLACAVAGIMSDANILLNT 89

Query: 72  LERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI 110
              L  +      Q      +L +     K        +
Sbjct: 90  AR-LHAQRYILSYQEPIPVEQLIQSLCHTKQGYTQFGGL 127


>gi|218186102|gb|EEC68529.1| hypothetical protein OsI_36818 [Oryza sativa Indica Group]
          Length = 118

 Score = 35.0 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 114 DKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNS---AEEIARKAMSIAA 170
           D+    +          +    AIGSG   A S+ +   + + +   AE IA   +    
Sbjct: 26  DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVM 85

Query: 171 DICVYTNHNIVLET 184
           +  V T +N+ +  
Sbjct: 86  EEKV-TPNNVDIAK 98


>gi|195347002|ref|XP_002040043.1| GM15573 [Drosophila sechellia]
 gi|194135392|gb|EDW56908.1| GM15573 [Drosophila sechellia]
          Length = 193

 Score = 35.0 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 57/180 (31%), Gaps = 23/180 (12%)

Query: 4   MGDKHYAVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAG 63
           M +    + +    I+ ++    V++A D            N  ++  +           
Sbjct: 1   MMEDESYMSIEG-NIVGLKSTNAVILATDS-----------NEYEMYLIDDRIYCCAPRS 48

Query: 64  SSADAFTLLERLEKKLEQYPNQLLRSS-VELAKDWRMDKYLRNLEAMILIA--DKTITLV 120
                  L   +  K+EQ      +   V   +D   DKY       +LIA  D     +
Sbjct: 49  GIDRKIVLE--VSSKVEQLVRDRGQKVTVSQVRDMFCDKYQNTESPNVLIAGQDSKGLHL 106

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMST--QNS-AEEIARKAMSIA-ADIC-VY 175
            +             A G+     +       S     S AE +ARKA+    A++C +Y
Sbjct: 107 FSMELGKSRM-VIYAAKGTDAENIVGILSHDWSDFINLSEAEHLARKALRCEHAEMCTIY 165


>gi|315139006|ref|NP_001186708.1| proteasome subunit beta type-2 isoform 2 [Homo sapiens]
 gi|332248602|ref|XP_003273453.1| PREDICTED: proteasome subunit beta type-2-like isoform 2 [Nomascus
           leucogenys]
 gi|332808414|ref|XP_003308023.1| PREDICTED: proteasome subunit beta type-2 isoform 2 [Pan
           troglodytes]
 gi|119627813|gb|EAX07408.1| proteasome (prosome, macropain) subunit, beta type, 2, isoform
           CRA_b [Homo sapiens]
 gi|221041574|dbj|BAH12464.1| unnamed protein product [Homo sapiens]
          Length = 176

 Score = 35.0 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 14/136 (10%)

Query: 45  NARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYL- 103
           +  K+ ++ +  ++    G + D     E ++K ++ Y  +        A      + L 
Sbjct: 6   DHDKMFKMSEKILLLC-VGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLA 64

Query: 104 --------RNLEAMILIADK-TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMST 154
                    ++  ++   D+     +          +    A G G    LS      + 
Sbjct: 65  DCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTP 124

Query: 155 QNS---AEEIARKAMS 167
             S   A E+ RK + 
Sbjct: 125 TISRERAVELLRKCLE 140


>gi|119489576|ref|ZP_01622336.1| hypothetical protein L8106_08206 [Lyngbya sp. PCC 8106]
 gi|119454488|gb|EAW35636.1| hypothetical protein L8106_08206 [Lyngbya sp. PCC 8106]
          Length = 255

 Score = 35.0 bits (79), Expect = 5.1,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN--IIAGFAGSSADAFTLLE 73
          T  L +  +  +V+A D + + G   +    +       G   I+   AG+ +    ++ 
Sbjct: 2  TYCLGIITNDGLVMAADSRTNAGVDYISTYQKLFDFSHPGERVILLCSAGNLSVTQGVVS 61

Query: 74 RLEKKLEQYPNQLLRSSVEL 93
           LEK L+   +  L +   +
Sbjct: 62 ELEKDLKVQEDTNLHNITCM 81


>gi|115688504|ref|XP_001201298.1| PREDICTED: similar to alpha 4 subunit of 20S proteasome, partial
          [Strongylocentrotus purpuratus]
 gi|115731067|ref|XP_790675.2| PREDICTED: similar to alpha 4 subunit of 20S proteasome, partial
          [Strongylocentrotus purpuratus]
          Length = 84

 Score = 35.0 bits (79), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 19 LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
          + VR   +VV+  + + S+ +   +   RK+  L    +   FAG +ADA  L+ R   +
Sbjct: 1  VGVRGKDLVVLGVEKK-SVAKLQEERTVRKICVLDDH-VCMAFAGLTADARILINRARIE 58

Query: 79 LEQYPNQLLRSSV 91
           + +   +     
Sbjct: 59 CQSHRLTVEDPVT 71


>gi|12229908|sp|O96788|PSA1_TRYBR RecName: Full=Proteasome subunit alpha type-1; AltName: Full=20S
           proteasome subunit alpha-6
 gi|4218584|emb|CAA10314.1| proteasome subunit alpha-6 [Trypanosoma brucei rhodesiense]
 gi|261332654|emb|CBH15649.1| 20S proteasome subunit alpha-6, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 266

 Score = 35.0 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 20/170 (11%)

Query: 14  HATTILTVRKDGVVVIAGDGQ--VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTL 71
           + +  + V+    VV+    +  VS     + +   K  +L +   +A  +G  AD   L
Sbjct: 31  NGSAAVGVKGADYVVLTALKRNPVSG----LSSYQEKAFKLDEHVGMA-ISGLVADGRAL 85

Query: 72  LERLEKKL--EQYPNQLLRSSVEL-----AKDWRMDKY--LRNLEAMILIA--DKTITLV 120
              L  +    +Y +      V L     AK  R  ++   R     +LIA  D+    +
Sbjct: 86  SRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQGPRL 145

Query: 121 ITGMGDVLEPENGVMAIGSGGSYALSAARALMS--TQNSAEEIARKAMSI 168
              +      +    A+G     A +              +E+   A+  
Sbjct: 146 YQTVPSGDVFDFKATAMGLRSQAARTYLERHFRGFPACDLDELVMHALRA 195


>gi|312870249|ref|ZP_07730380.1| 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
           [Lactobacillus oris PB013-T2-3]
 gi|311094272|gb|EFQ52585.1| 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
           [Lactobacillus oris PB013-T2-3]
          Length = 283

 Score = 35.0 bits (79), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 11/62 (17%)

Query: 135 MAIGSGGSYALSAARAL---MSTQNSAEEIARKAMSIAADI--CVY------TNHNIVLE 183
             +G G S A +  RAL        S +E+A+ A++I +D+  CVY      T H   +E
Sbjct: 98  AGLGGGSSDAAAVLRALNRIWRLDLSLDELAKIALTIDSDVPYCVYSRLAHVTGHGEKIE 157

Query: 184 TL 185
            L
Sbjct: 158 LL 159


>gi|225705072|gb|ACO08382.1| Proteasome subunit alpha type 6 [Oncorhynchus mykiss]
          Length = 246

 Score = 35.0 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 43/190 (22%), Gaps = 16/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T L +R     V+A   +V              +       +     +   +     R
Sbjct: 36  GLTSLAIRGQDCAVVATQKKVPDKLLDASTVTHLFKITENIGCVMSGMTADNKSQVQRAR 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTI-TLVITGM 124
            E    +Y          L K       +    A +         +  D+     V    
Sbjct: 96  YEAANWKYKYGYEIPVDMLCKRMADISQVYTQNAEMRPLGCCMIVIGVDEECGPQVYKCD 155

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSIAADICVYTNHN 179
                      A G   + A +     +  +         E A   +S    I  +    
Sbjct: 156 PAGYYCGFKATAAGVKQTEATTFLEKKVKKKLDWTFAQTIETAITCLSTVLSID-FKPSE 214

Query: 180 IVLETLKVGD 189
           + +  +   D
Sbjct: 215 LEIGVITTED 224


>gi|169605287|ref|XP_001796064.1| hypothetical protein SNOG_05667 [Phaeosphaeria nodorum SN15]
 gi|160706740|gb|EAT86731.2| hypothetical protein SNOG_05667 [Phaeosphaeria nodorum SN15]
          Length = 256

 Score = 35.0 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 49/171 (28%), Gaps = 20/171 (11%)

Query: 17  TILTVRKDGVVVIAGDGQV-SLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLE 73
           T L VR     V+    +V    + +  A+   + RL    G ++ G    +  + +   
Sbjct: 36  TSLGVRGKDCAVVISQKKVPVRDKLIDPASVSHIFRLSPSVGCVMTGSIADARASVSRAR 95

Query: 74  RLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTI-TLVITG 123
               +   Y          LAK       +    A +         +  D      +   
Sbjct: 96  GEAAEFR-YKFGYEMPCDVLAKRIANISQVYTQRAYMRPLGVATTLISLDSEYGPQLYKC 154

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSA----EEIARKAMSIAA 170
                       A G     AL+     +  +  A    EE+    ++IAA
Sbjct: 155 DPAGYYVGYKATASGPKTQEALNFLEKKLKNKEHAEGSWEEVVE--LAIAA 203


>gi|145223330|ref|YP_001134008.1| hypothetical protein Mflv_2743 [Mycobacterium gilvum PYR-GCK]
 gi|315443787|ref|YP_004076666.1| 20S proteasome subunit (alpha or beta) [Mycobacterium sp. Spyr1]
 gi|145215816|gb|ABP45220.1| hypothetical protein Mflv_2743 [Mycobacterium gilvum PYR-GCK]
 gi|315262090|gb|ADT98831.1| 20S proteasome subunit (alpha or beta) [Mycobacterium sp. Spyr1]
          Length = 231

 Score = 35.0 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 48/174 (27%), Gaps = 21/174 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSS---ADAFTLL 72
           T +L +R    +V+A D Q++     +   A+K+  LG      G    +          
Sbjct: 2   TVVLALRCANGLVLASDSQITDPGRGLTYPAQKLHTLGAHAAWGGSGSRAVLYDVEQVFS 61

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD------------KTITLV 120
              +  LE         +  L                                      +
Sbjct: 62  REPDSILEAKDIGHALQARILPILKHHYANFIAEVPGQETGGTPATYVLAAGYVGDAPFI 121

Query: 121 ITGMGDVL---EPENGVMAIGSGGSYALSAARALMSTQNSAEEI---ARKAMSI 168
           I    + L     E G  A+GSG + A  A   +     S  ++      A+ +
Sbjct: 122 IDIDPNGLIGHHEETGFQAVGSGAAMAQQAHALVTHFHMSQRDVDYGVVAALRV 175


>gi|213021241|ref|NP_001132944.1| proteasome subunit alpha type-6 [Sus scrofa]
 gi|210062872|gb|ACJ06406.1| proteasome subunit alpha type 6 [Sus scrofa]
          Length = 246

 Score = 35.0 bits (79), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 41/174 (23%), Gaps = 17/174 (9%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + VR     VI    +V              +       +     + + +     R
Sbjct: 36  GLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRAR 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTI-TLVITGM 124
            E    +Y          L K       +              +++  D+     V    
Sbjct: 96  YEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCD 155

Query: 125 GDVLEPENGVMAIGSGGSYALSAARA--LMSTQNSAEEIARKAMSIAADICVYT 176
                      A G   + + S            + E+    A++     C++T
Sbjct: 156 PAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAIT-----CLFT 204


>gi|320163685|gb|EFW40584.1| urocanate hydratase [Capsaspora owczarzaki ATCC 30864]
          Length = 692

 Score = 35.0 bits (79), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 9/84 (10%)

Query: 98  RMDKYLRNLEAMILIADKTITLVITGMGDVLEPE------NGVMAIGSGGSY---ALSAA 148
           R  ++     + +L A +    ++   G  L P         + ++G G           
Sbjct: 417 RGMRFWDYGNSFMLQAGRAGANILRPDGGFLYPSYVEDIMGDIFSLGFGPFRWVCTSGKR 476

Query: 149 RALMSTQNSAEEIARKAMSIAADI 172
             L+ T   A E+ R+AM  A+D 
Sbjct: 477 EDLLLTDQLAAEVIREAMKEASDR 500


>gi|261194120|ref|XP_002623465.1| proteasome component C7-alpha [Ajellomyces dermatitidis SLH14081]
 gi|239588479|gb|EEQ71122.1| proteasome component C7-alpha [Ajellomyces dermatitidis SLH14081]
 gi|239606958|gb|EEQ83945.1| proteasome component C7-alpha [Ajellomyces dermatitidis ER-3]
 gi|327354578|gb|EGE83435.1| proteasome subunit alpha type [Ajellomyces dermatitidis ATCC 18188]
          Length = 254

 Score = 35.0 bits (79), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 47/168 (27%), Gaps = 18/168 (10%)

Query: 17  TILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK--GNIIAGFAGSSADAFTLLER 74
           T L ++     V+    +V   + +  ++   + +L    G ++ G    +  + T  + 
Sbjct: 36  TSLGIKGKDCAVVLSQKKV-PDKLIEPSSVTHIFQLSPSVGCVMTGSIADARASVTRAQS 94

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKT-ITLVITGM 124
              +   Y          LAK       +    A +         +  D      +    
Sbjct: 95  EAAEFR-YKFGYEMPCDVLAKRLANINQVYTQRAYMRPLGVAITLVSVDSELGPQLYKCD 153

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNSA----EEIARKAMSI 168
                      A G      L+     +  +  A    E++   A+S 
Sbjct: 154 PAGYYVGYRATASGPKQQDILNHLEKKLKNKEHAEGSWEDVVELAIST 201


>gi|307152889|ref|YP_003888273.1| 20S proteasome A and subunit Bs [Cyanothece sp. PCC 7822]
 gi|306983117|gb|ADN14998.1| 20S proteasome A and B subunits [Cyanothece sp. PCC 7822]
          Length = 255

 Score = 35.0 bits (79), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 48/176 (27%), Gaps = 26/176 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  L +     +V+  D + + G   T            G   I+   +G+ +    ++ 
Sbjct: 2   TYCLGIINRFGIVMGADSRTNAGVDYTSAYRKLFDFSLPGDRVIVICSSGNLSVTQGVII 61

Query: 74  RLEKKLE-----------------QYPNQLLRSSVELAKDWR-MDKYLRNLEAMI-LIAD 114
            L++ ++                  Y     R   +  + W   DK       ++     
Sbjct: 62  GLQRDIKNGENTNLYTLSSMYDVAHYIGNKSRQIQDRDRAWLEKDKISYQCNFLLGGQIK 121

Query: 115 KTITLVITGMGDVLEP----ENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                +              E   + IG    Y        ++     E +A+ A+
Sbjct: 122 GEPPELYMIYPQGNYIQATKETPFLQIGETK-YGKPLLDRTITYDTPLEAMAKCAL 176


>gi|328954291|ref|YP_004371625.1| 20S proteasome A and B subunits [Desulfobacca acetoxidans DSM
          11109]
 gi|328454615|gb|AEB10444.1| 20S proteasome A and B subunits [Desulfobacca acetoxidans DSM
          11109]
          Length = 235

 Score = 35.0 bits (79), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
          T IL +     +V+A DGQV+ G+     +  K       +I+   AG  +    + ERL
Sbjct: 2  TLILGLAAVDGIVLASDGQVTTGEV---RSPGKKIFPLSNSILWAAAGELSLIQRVQERL 58

Query: 76 EK 77
            
Sbjct: 59 TA 60


>gi|260550260|ref|ZP_05824473.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
 gi|260406788|gb|EEX00268.1| conserved hypothetical protein [Acinetobacter sp. RUH2624]
          Length = 224

 Score = 35.0 bits (79), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 12/130 (9%)

Query: 16  TTILTVRKDGVVVIAGDGQVS-----LGQTVMKANARKVRRLGKGNIIAGFAGSSADAFT 70
           T IL ++ +  +VIA D + +      G  + +   +K+     G  I    G       
Sbjct: 2   TFILAIQLEDSIVIAADTRSTIPHQNNGSYLYQDGIQKLFPWENG--IITGTGELNLIQN 59

Query: 71  LLERLEKKLEQYPNQLLRSSVELAKDWR----MDKYLRNLEAMILIADKTITLVITGMGD 126
           ++     K+ +     L   ++ +K  R        L   + +     K    + +   +
Sbjct: 60  VIYSFN-KVNKNSIDELPDLLKASKLRREQEITHSQLEITKLLYSTYRKNGAQIYSIQPN 118

Query: 127 VLEPENGVMA 136
            LE    +  
Sbjct: 119 KLEEYEVIRC 128


>gi|115453799|ref|NP_001050500.1| Os03g0565300 [Oryza sativa Japonica Group]
 gi|14091863|gb|AAK53866.1|AC016781_20 Conserved hypothetical protein [Oryza sativa Japonica Group]
 gi|108709354|gb|ABF97149.1| expressed protein [Oryza sativa Japonica Group]
 gi|113548971|dbj|BAF12414.1| Os03g0565300 [Oryza sativa Japonica Group]
          Length = 1030

 Score = 34.6 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 35/115 (30%), Gaps = 9/115 (7%)

Query: 61  FAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL-----IADK 115
           F G + ++  L  R   KL      L R    L         +R  E  +L        +
Sbjct: 70  FKGWAPESPKLWRRWVAKLRPRHEPLWRKVGILDAVLATTCRVRRDEGALLQLAAFWCGE 129

Query: 116 TITLVITGMGDVLEPENGVMAIGS---GGSYALSAARALMSTQNSAEEIARKAMS 167
           T T V       +  E+  +  G    G         AL      A E  R+A+ 
Sbjct: 130 TNTFVFPWGEATVTLEDVAVLGGLPLLGRPVRAPPQDAL-RGDVDALEAVRRALY 183


>gi|162606062|ref|XP_001713546.1| 26S proteasome SU A5 [Guillardia theta]
 gi|13794466|gb|AAK39841.1|AF165818_49 26S proteasome SU A5 [Guillardia theta]
          Length = 232

 Score = 34.6 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 56/178 (31%), Gaps = 26/178 (14%)

Query: 15  ATTILTVRKDGVVVIAGDG--QVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
            +T   ++    + I  +   + SL       N +K+  L K       +G  +D+  ++
Sbjct: 26  GSTSCGIKTKDFIFILSERKKKKSLDYL----NDQKIYVLDKNKGCC-VSGLISDSRKII 80

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLE---------------AMILIADKTI 117
           + +    E     +            ++  + +                 + +L      
Sbjct: 81  DNVRIYCENKYFLINSYPSIEECSNLINNLITSYNTNNDVNKISPRPLGTSFLLFGKSNK 140

Query: 118 TL-VITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQN---SAEEIARKAMSIAAD 171
            L +I         ++ ++AIG G    L   +    +      A+ +A K +   ++
Sbjct: 141 KLELIKVDPSGRYIKDKILAIGEGSKDVLIILQEGYRSNMKKIEAKTLAFKTLRAISE 198


>gi|114705646|ref|ZP_01438549.1| hypothetical protein FP2506_14309 [Fulvimarina pelagi HTCC2506]
 gi|114538492|gb|EAU41613.1| hypothetical protein FP2506_14309 [Fulvimarina pelagi HTCC2506]
          Length = 231

 Score = 34.6 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 46/169 (27%), Gaps = 28/169 (16%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGK---------GNII-------- 58
           T +L V     VVI  D Q++     M   A K+  LG+          +++        
Sbjct: 2   TVVLAVVCRDGVVIGSDSQITDKGRDMTYPADKLHPLGELAAWGGSGARSVLADVKRRFD 61

Query: 59  ---AGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADK 115
              A    +      L E++   L  +    +      A              M      
Sbjct: 62  ENSAAILDAPDIGRALQEQVLPILRHHYETFIPDVPGEA-----GGGTPAAYVMAAGWRN 116

Query: 116 TITLVITGMGDVL---EPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
               ++      +       G  AIGSG   A  A   L     +   +
Sbjct: 117 GEPWILEITPSGMIGHYANIGFHAIGSGAPMAQQANSLLSHFHLTKRSL 165


>gi|195037993|ref|XP_001990445.1| GH19348 [Drosophila grimshawi]
 gi|193894641|gb|EDV93507.1| GH19348 [Drosophila grimshawi]
          Length = 200

 Score = 34.6 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 49/157 (31%), Gaps = 19/157 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
            +I+ +     V IA       G  +  +N + + +LG    + G  G  AD     + L
Sbjct: 10  GSIIAMHGKDCVAIAV-----KGGNINDSN-KNLYKLGARLYL-GLTGRLADILMAYKHL 62

Query: 76  EKKLEQYPNQLLRSSVELAKDWRMDKYLR--NLEAMILIA-------DKTITLVITGMGD 126
             +   +  +  R  +       + + L    L    + A       D     + +  G 
Sbjct: 63  ILRKNIFELEKNRELLPKELTLILSQLLYAHRLVPFQIEAVIVGMDPDTLEPHICSL-GM 121

Query: 127 VLEPE--NGVMAIGSGGSYALSAARALMSTQNSAEEI 161
           +  P      +  G      L   ++L     +  ++
Sbjct: 122 IGYPNVTKDFVVAGHRHGPLLGLCKSLWRPSLNPSQL 158


>gi|110639827|ref|YP_680037.1| proteasome-type protease [Cytophaga hutchinsonii ATCC 33406]
 gi|110282508|gb|ABG60694.1| proteasome-type protease [Cytophaga hutchinsonii ATCC 33406]
          Length = 243

 Score = 34.6 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 25/170 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVR----------------RLGKGNIIA 59
           T  L V+    +V   D +++ G       A+K+                 R  +   I 
Sbjct: 2   TYCLGVKLKDGLVAIADTRITSG--TDTTTAKKLFVHESAHGSLFLMTSGLRSVRDKAIT 59

Query: 60  GFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWR---MDKYLRNLEAMILIADKT 116
            F     D   +  +L + +  + NQL R + E  K          L  +    L  D+ 
Sbjct: 60  YFKEVLKDEHVVYNQLYEAVNAFGNQLRRVAEEDRKALYAAGFAFNLHTIVGGQLKNDEE 119

Query: 117 I-TLVITGMGDVLEPEN--GVMAIGSGGSYALSAARALMSTQNSAEEIAR 163
               ++   G+ +E       M IG    Y        +  +++ EE+ +
Sbjct: 120 PKMFLLYPEGNWIELTQTSPFMIIG-NSGYGKPILNRTVKYESTLEEVLK 168


>gi|260461268|ref|ZP_05809516.1| hypothetical protein MesopDRAFT_2163 [Mesorhizobium opportunistum
           WSM2075]
 gi|319785445|ref|YP_004144921.1| hypothetical protein Mesci_5849 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|259032805|gb|EEW34068.1| hypothetical protein MesopDRAFT_2163 [Mesorhizobium opportunistum
           WSM2075]
 gi|317171333|gb|ADV14871.1| hypothetical protein Mesci_5849 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 173

 Score = 34.6 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 26/153 (16%)

Query: 16  TTILTVRKDGVVVIAGDGQ---VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
           TTI        V +A D +     LG      +  K+RRL  G +I            +L
Sbjct: 2   TTI---AYKHGV-MAADSRAYGAGLGSI---GSKLKIRRLPDGRLIGATTPQVGAGEAIL 54

Query: 73  ERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEP-E 131
           +      + +                      +   ++++       V +G   +    E
Sbjct: 55  DWYAAGADVHNTPEGVK--------------GSNVGLLVVHPDGRAQVASGAWTLTGMLE 100

Query: 132 NGVMAIGSGGSYALSAARALMSTQNSAEEIARK 164
           +    IGSG  YA +   +   T   A EIA K
Sbjct: 101 SPYFVIGSGSHYAEAILESGG-TSQQAVEIACK 132


>gi|254522190|ref|ZP_05134245.1| 20S proteasome, A/B subunit [Stenotrophomonas sp. SKA14]
 gi|219719781|gb|EED38306.1| 20S proteasome, A/B subunit [Stenotrophomonas sp. SKA14]
          Length = 247

 Score = 34.6 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 53/177 (29%), Gaps = 27/177 (15%)

Query: 16  TTILTVRKDGVVVIAGDGQ--VSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  + +  D  +V A D +   SL    +          G+   +   AG+ A    L+ 
Sbjct: 2   TYCVGIEVDEGLVFAADTRTNASLDDVRVHRKLHVFEYPGQAAYVLMAAGNLATTQLLVS 61

Query: 74  RLEK-----------------KLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIAD-- 114
           RL +                 +  +Y  QLL  S   +          N +A ++     
Sbjct: 62  RLGRDAGERRTPNLRDMAHLFEAAEYVGQLLVDSQVHSAHSEHGHDGVNTQATLIFGGQI 121

Query: 115 -KTITLVITGMG----DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 +             PE   + IG    Y       ++S     E+ AR A+
Sbjct: 122 AGERPGLYMIYPLGNAIAASPETPYLQIGE-SKYGKPILDRILSPATRLEDAARTAI 177


>gi|126283549|ref|XP_001363110.1| PREDICTED: similar to prosomal P27K protein [Monodelphis domestica]
          Length = 246

 Score = 34.6 bits (78), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 37/165 (22%), Gaps = 12/165 (7%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + VR     VI    +V              R       +     + + +     R
Sbjct: 36  GLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFRITENIGCVMTGMTADSRSQVQRAR 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLR---------NLEAMILIADKTI-TLVITGM 124
            E    +Y          L K       +              +++  D+     V    
Sbjct: 96  YEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGVDEEQGPQVYKCD 155

Query: 125 GDVLEPENGVMAIGSGGSYALSAARA--LMSTQNSAEEIARKAMS 167
                      A G   + + S            + E+    A++
Sbjct: 156 PAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAIT 200


>gi|328543397|ref|YP_004303506.1| peptidase, T1 family [polymorphum gilvum SL003B-26A1]
 gi|326413142|gb|ADZ70205.1| Peptidase, T1 family [Polymorphum gilvum SL003B-26A1]
          Length = 243

 Score = 34.6 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 58/177 (32%), Gaps = 26/177 (14%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  + ++ D  +V A D + + G          +   + G+       +G+ A   +++ 
Sbjct: 2   TYCVGLKLDRGLVFAADTRTNAGVDNIATFKKLKIWEKPGERVFALMSSGNLAITQSVVS 61

Query: 74  RLEKKLEQY--PNQLLRSSVELAKDWRM----DKYLRNLEAMILIADKTITLVITGMGDV 127
            L +++  +      L S   L +  R+     + +R L+   L A      V    G  
Sbjct: 62  ILSEQIASHSNKGPTLMSVDTLFQAARVVGSAVREVRALDGEALAASAENFYVTFIFGGQ 121

Query: 128 LE-PENGVMAIGSGGSYALSAARALM-----------------STQNSAEEIARKAM 166
           +   E  +  I S G++  +    +                         E A+ A+
Sbjct: 122 IMGEEPRLFQIYSAGNFIEATDDTMFFQIGEHKYGKPILDRVTRHDMRLGEAAKMAL 178


>gi|242094848|ref|XP_002437914.1| hypothetical protein SORBIDRAFT_10g004740 [Sorghum bicolor]
 gi|241916137|gb|EER89281.1| hypothetical protein SORBIDRAFT_10g004740 [Sorghum bicolor]
          Length = 148

 Score = 34.6 bits (78), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 14 HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKG--NIIAGFAGSSA 66
          +A + L +     VV+ G+ +V+        +A K+ ++       +AG    + 
Sbjct: 30 NAGSALGILAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDAT 84


>gi|9651783|gb|AAF91271.1| 20S proteasome alpha 5 subunit [Endoreticulatus sp.]
          Length = 109

 Score = 34.6 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMK----ANARKVRRLGKGNIIAGFAGSSADAFT 70
           TT + VR +  V++     VS  + +       + +K  ++    I+AG +G S DA T
Sbjct: 8  GTTTIGVRLENCVIL-----VSEKKLISALQNPQSIKKHFKIYD-TIVAGVSGVSGDAPT 61

Query: 71 LLERLEKKLEQYPNQLLRSSV 91
          ++ +       +         
Sbjct: 62 IINKCRNICLNHEKIYKEQIS 82


>gi|85084548|ref|XP_957331.1| proteasome component PRE6 [Neurospora crassa OR74A]
 gi|28918421|gb|EAA28095.1| proteasome component PRE6 [Neurospora crassa OR74A]
          Length = 269

 Score = 34.6 bits (78), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 36/148 (24%), Gaps = 14/148 (9%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           +  + + S  +            L   ++   FAG +ADA  L+++   + + +   L  
Sbjct: 45  LGCEKR-SAMKLQDTRITPSKIGLVDKHVCLAFAGLNADARILVDKARLEAQSHRLNLED 103

Query: 89  SSV------ELAKDWRMDKYLRNLEAMIL-------IADKTITLVITGMGDVLEPENGVM 135
                     +A   +       +    +            +  +       +       
Sbjct: 104 PVTIEYITKYVAGVQQRYTQSGGVRPFGISTLIVGFDNGSDVPRLYQTEPSGIYSAWKAN 163

Query: 136 AIGSGGSYALSAARALMSTQNSAEEIAR 163
           AIG                    E   R
Sbjct: 164 AIGRSSKTVREFLERNYKDDMDREATIR 191


>gi|209730840|gb|ACI66289.1| Proteasome subunit alpha type-6 [Salmo salar]
 gi|303668431|gb|ADM16303.1| Proteasome subunit alpha type-6 [Salmo salar]
          Length = 246

 Score = 34.6 bits (78), Expect = 7.7,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 43/190 (22%), Gaps = 16/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + VR     V+    +V              R       +     + + +     R
Sbjct: 36  GLTSVAVRGKDCAVVVTQKKVPDKLLDASTVTHLFRITENIGCVMSGMTADSKSQVQRAR 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKTI-TLVITGM 124
            E    +Y          L K       +    A +         +  D+     V    
Sbjct: 96  YEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMIVIGVDEECGPQVYKCD 155

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSIAADICVYTNHN 179
                      A G   + A S     +  +         E A   +S    I  +    
Sbjct: 156 PAGYYCGFKATAAGVKQTEATSFLEKKVKKKLDWTFKETVETAITCLSTVLSID-FKPSE 214

Query: 180 IVLETLKVGD 189
           + +  +   D
Sbjct: 215 LEIGVITTED 224


>gi|254447958|ref|ZP_05061422.1| 20S proteasome, A/B subunit [gamma proteobacterium HTCC5015]
 gi|198262384|gb|EDY86665.1| 20S proteasome, A/B subunit [gamma proteobacterium HTCC5015]
          Length = 65

 Score = 34.6 bits (78), Expect = 7.7,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 21/46 (45%)

Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
             +       A+GSG  +AL A  AL    + AE IAR  +   A+
Sbjct: 2   RDVTEFERFWAVGSGAEFALGAMHALYERLDDAEAIARAGVEAGAE 47


>gi|50540244|ref|NP_001002589.1| proteasome subunit alpha type-6 [Danio rerio]
 gi|49902952|gb|AAH76196.1| Zgc:92716 [Danio rerio]
          Length = 246

 Score = 34.6 bits (78), Expect = 7.8,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 44/190 (23%), Gaps = 16/190 (8%)

Query: 15  ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLER 74
             T + VR     ++    +V              R       +     + + +     R
Sbjct: 36  GLTSVAVRGKDCAIVVTQKKVPDKLLDSSTVTHLFRITENIGCVMSGMTADSRSQVQRAR 95

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMI---------LIADKT-ITLVITGM 124
            E    +Y          L K       +    A +         +  D+     V    
Sbjct: 96  YEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMIVIGLDEELGPQVYKCD 155

Query: 125 GDVLEPENGVMAIGSGGSYALSAARALMSTQNS-----AEEIARKAMSIAADICVYTNHN 179
                      A G   + A S     +  +       A E A   ++    I  +    
Sbjct: 156 PAGYYCGFKATAAGVKQTEATSFLEKKVKKKLDWTFEQAVETAITCLTTVLSID-FKPSE 214

Query: 180 IVLETLKVGD 189
           + +  +   D
Sbjct: 215 LEIGVITAED 224


>gi|323700532|ref|ZP_08112444.1| hypothetical protein DND132_3126 [Desulfovibrio sp. ND132]
 gi|323460464|gb|EGB16329.1| hypothetical protein DND132_3126 [Desulfovibrio desulfuricans
           ND132]
          Length = 254

 Score = 34.6 bits (78), Expect = 7.8,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 21/161 (13%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERL 75
           T  L +  +  +V   D +++ G  ++ A      + G G      +G  +    ++   
Sbjct: 2   TFCLGINVEEGLVGIADTRITSGNEIITARKVTAYQNGFGAFFVMTSGLRSVRDKMITYF 61

Query: 76  EKKL---EQYPNQLLRSSVELAKDWR--------------MDKYLRNLEAMILIADKTIT 118
           E++L   E+ P++L +    +A++ R              ++  L  L    L  D T  
Sbjct: 62  EERLDTMEERPDKLYKMVNLMAEELRRVCGEDEAYLCRGGLNINLHTLVGGQLTGDSTHK 121

Query: 119 -LVITGMGDVLEPEN---GVMAIGSGGSYALSAARALMSTQ 155
             +I   G+ +E          IG GG       R L    
Sbjct: 122 LYLIYPEGNWVEIGQGTTPYHIIGEGGYGKPVLDRTLQHGD 162


>gi|240138804|ref|YP_002963279.1| hypothetical protein MexAM1_META1p2208 [Methylobacterium extorquens
           AM1]
 gi|240008776|gb|ACS40002.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 267

 Score = 34.6 bits (78), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 51/147 (34%), Gaps = 10/147 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  + V  +  +V+  D + + G                 +  ++   AG+ +   ++L 
Sbjct: 21  TYCVGVLVEDGLVMIADTRTNAGLDNISTFRKLHMFNTPNERVMMLASAGNLSMTQSVLS 80

Query: 74  RLEKKLE----QYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTITLVITGMG 125
            L + ++    + P +L  ++        + + +R +     A    A+  + +     G
Sbjct: 81  MLREGVDDVEGETPAKLKDAATMFKAAQLVGRAIRRVREIEAAGFEAANLRMEVSFLFGG 140

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM 152
            +      +  I S G++   +  A  
Sbjct: 141 QIGTEPMRLFMIYSAGNFIECSREAPF 167


>gi|293354820|ref|XP_002728569.1| PREDICTED: proteasome alpha 8 subunit-like [Rattus norvegicus]
          Length = 166

 Score = 34.6 bits (78), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 42/133 (31%), Gaps = 18/133 (13%)

Query: 14  HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGN-----IIAGFAGSSADA 68
             +T + +R   +VV+  + + S+ +   +   RK+  L         ++  F G +ADA
Sbjct: 30  KGSTAVGIRGTNIVVLGVEKK-SVAKLQDERTVRKICALDDHVCMAFAVLTVFTGLTADA 88

Query: 69  FTLLERLEKKLEQYPNQLLRSSV------ELAKDWRMDKYLRNLEAMILIA------DKT 116
             ++ R   + + +   +            +A   +            + A      D  
Sbjct: 89  RVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDG 148

Query: 117 ITLVITGMGDVLE 129
           I  +         
Sbjct: 149 IPRLYQTDPSGTY 161


>gi|114319933|ref|YP_741616.1| 20S proteasome, A and B subunits [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226327|gb|ABI56126.1| 20S proteasome, A and B subunits [Alkalilimnicola ehrlichii MLHE-1]
          Length = 241

 Score = 34.2 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 49/173 (28%), Gaps = 22/173 (12%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  L       +V A D + + G            +   G   ++   AG+ A    ++ 
Sbjct: 2   TYCLAASLKAGLVFAADTRTNAGLDHVNSFRKMHSLVWEGDRVLVLLSAGNLATTQAVVT 61

Query: 74  RLEKKLE-----QYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV- 127
            L+++ E          L  ++  + +     +        +       T ++ G     
Sbjct: 62  HLQREAESGGPLSEVRHLSDAADHVGQVSLQVQRKYRAAEDMSAVSLEATFILGGQIGDE 121

Query: 128 ------LEPENGVMAIG--------SGGSYALSAARALMSTQNSAEEIARKAM 166
                 + P+   +               Y       ++    S E+ AR A+
Sbjct: 122 PTGAFLIYPQGNFITCSEEQPFLQIGETKYGKPILDRIIEPGLSLEDAARCAL 174


>gi|328784243|ref|XP_623418.2| PREDICTED: probable protein phosphatase 2C T23F11.1-like [Apis
           mellifera]
          Length = 329

 Score = 34.2 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 44/161 (27%), Gaps = 10/161 (6%)

Query: 15  ATTILTVRKDGVVVI---AGDGQVSL---GQTV-MKANARKVRRLGKGNIIAGFAGSSAD 67
            TT++ +     V+    AGD +      G  + +  + +   +  +  I A       +
Sbjct: 129 GTTVIALLIKDNVIYSANAGDSRAVASINGNAIPLSRDHKPTLKDERERIEAAGGWVEFN 188

Query: 68  AFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDV 127
                  L + L  +  +         +          ++A  +  D    ++       
Sbjct: 189 RVNGQLALTRALGDFMFKRNERKSPQEQIV---TAFPEVQAFQITEDWEFVVLACDGIWD 245

Query: 128 LEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSI 168
           +   N V+               L       EEI  + M  
Sbjct: 246 VMTSNEVVNFIRTRLVQSKFGTRLEQDTLDPEEICEELMKH 286


>gi|303328164|ref|ZP_07358603.1| putative GGDEF domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861990|gb|EFL84925.1| putative GGDEF domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 550

 Score = 34.2 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 39/127 (30%), Gaps = 12/127 (9%)

Query: 52  LGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMIL 111
                 I G  G + D   L   +  +LE     L  + +    +  +       +    
Sbjct: 231 FDDDGRIMGTVGVAHDVTNLA-TMSAELELLLGSLPFAVMITDAEDHVVNINEKFKEFFA 289

Query: 112 IADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAAD 171
           +AD     V+ G   +           SGG      ARA +    +  EI         D
Sbjct: 290 VADSD---VLGGDCRMWRENAL-----SGGRLVREEARAELRWTLNGREIVLDVQEQ--D 339

Query: 172 I-CVYTN 177
           I  V++N
Sbjct: 340 ILDVFSN 346


>gi|302421982|ref|XP_003008821.1| proteasome subunit alpha type-6-B [Verticillium albo-atrum
           VaMs.102]
 gi|261351967|gb|EEY14395.1| proteasome subunit alpha type-6-B [Verticillium albo-atrum
           VaMs.102]
          Length = 254

 Score = 34.2 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 18/166 (10%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKK 78
           + VR     V+    +V   + +  ++   + +L   ++     GS ADA    +R + +
Sbjct: 38  IGVRGKDCAVVLSQKKV-PDKLIDPSSVSHIFQLSP-SVGCVMTGSIADARAFSQRAQSE 95

Query: 79  LEQYPNQLLRSSVELAKDWRMDK---------YLRNLEA--MILIADKTI-TLVITGMGD 126
             ++  +        A   R+           Y+R       ++  D      +      
Sbjct: 96  AAEFRYKYGYEMPCDALAKRLANISQVYTQRAYMRPYGVATTLISVDSEFGPQLFKTDPA 155

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAE----EIARKAMSI 168
                    A G     AL+     +  +  AE    E+   A++ 
Sbjct: 156 GYYIGYKGTAAGPKQQEALNHLEKKLRNKEHAEGDWTEVVELAITT 201


>gi|271498943|ref|YP_003331968.1| 20S proteasome A and subunit Bs [Dickeya dadantii Ech586]
 gi|270342498|gb|ACZ75263.1| 20S proteasome A and B subunits [Dickeya dadantii Ech586]
          Length = 244

 Score = 34.2 bits (77), Expect = 8.6,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 16 TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
          T  + +R    +V A D + + G              + G+  ++   AG+ A   +++ 
Sbjct: 2  TYCVAMRLSDGLVFASDSRTNAGVDHIATFRKLHVFHQEGERVLVIQSAGNLATTQSIIS 61

Query: 74 RLEKKLEQYPNQLLRSSVEL 93
           L+ ++       L  +  L
Sbjct: 62 LLKARIHAQHTPNLMQTSTL 81


>gi|332019952|gb|EGI60412.1| Proteasome subunit alpha type-3 [Acromyrmex echinatior]
          Length = 179

 Score = 34.2 bits (77), Expect = 8.9,   Method: Composition-based stats.
 Identities = 9/121 (7%), Positives = 28/121 (23%), Gaps = 8/121 (6%)

Query: 56  NIIAGFAGSSADAFTLLERLEKKLEQYPN--------QLLRSSVELAKDWRMDKYLRNLE 107
             ++G    +                               S    A             
Sbjct: 1   MAVSGIISDARQIAETARSEAASYRSQYGVGIPLKYLNERVSMYMHAYTLYSAVRPYGCS 60

Query: 108 AMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMS 167
            ++   +    ++       +       A+G     A +    L  ++ + +++ ++A  
Sbjct: 61  VLLSAYETDGPILYMIDPSGVSYGYYGCAVGKAKQSAKTEIEKLKLSEMTCKDLVKEAAR 120

Query: 168 I 168
           I
Sbjct: 121 I 121


>gi|320580108|gb|EFW94331.1| Alpha 4 subunit of the 20S proteasome [Pichia angusta DL-1]
          Length = 384

 Score = 34.2 bits (77), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 14/145 (9%)

Query: 29  IAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLR 88
           +A + + +L     +    K+ ++     +A FAG +ADA  L+++   + + +   L  
Sbjct: 175 LACERRTTLKLQDPRITPSKINKIDTHVQLA-FAGLNADARILIDKARVEAQSHRLTLED 233

Query: 89  SSV------ELAKDWRMDKYLRNLEAMILIA-------DKTITLVITGMGDVLEPENGVM 135
                     +A   +            +         +     +       +       
Sbjct: 234 PVTVEYLTKYVAGVQQRYTQSGGTRPFGVSTLIAGFDENDKTPRLYQTEPSGIYSAWKAN 293

Query: 136 AIGSGGSYALSAARALMSTQNSAEE 160
           AIG                ++  +E
Sbjct: 294 AIGRSSKTVREFLEKNYDKEHELDE 318


>gi|163851638|ref|YP_001639681.1| putative proteasome-type protease [Methylobacterium extorquens PA1]
 gi|163663243|gb|ABY30610.1| putative proteasome-type protease [Methylobacterium extorquens PA1]
          Length = 248

 Score = 34.2 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 51/147 (34%), Gaps = 10/147 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  + V  +  +V+  D + + G                 +  ++   AG+ +   ++L 
Sbjct: 2   TYCVGVLVEDGLVMIADTRTNAGLDNISTFRKLHMFNTPNERVMMLASAGNLSMTQSVLS 61

Query: 74  RLEKKLE----QYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTITLVITGMG 125
            L + ++    + P +L  ++        + + +R +     A    A+  + +     G
Sbjct: 62  MLREGVDDIEGETPAKLKDAATMFKAAQLVGRAIRRVREIEAAGFEAANLRMEVSFLFGG 121

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM 152
            +      +  I S G++   +  A  
Sbjct: 122 QIGTEPMRLFMIYSAGNFIECSREAPF 148


>gi|241730530|ref|XP_002413831.1| proteasome subunit alpha type, putative [Ixodes scapularis]
 gi|215507647|gb|EEC17139.1| proteasome subunit alpha type, putative [Ixodes scapularis]
          Length = 76

 Score = 34.2 bits (77), Expect = 9.3,   Method: Composition-based stats.
 Identities = 6/43 (13%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 15 ATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNI 57
           +T + ++    VV+A + +V+    +      K+  +    +
Sbjct: 34 GSTAIGIQTAEGVVLAVEKRVTS-PLMEPTTIEKIVEIDNHIV 75


>gi|238568117|ref|XP_002386375.1| hypothetical protein MPER_15404 [Moniliophthora perniciosa FA553]
 gi|215438155|gb|EEB87305.1| hypothetical protein MPER_15404 [Moniliophthora perniciosa FA553]
          Length = 62

 Score = 34.2 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 14 HATTILTVRKDGVVVIAGDGQVS 36
          HA T+L V     VV+A + +V+
Sbjct: 14 HAGTVLGVLAKDGVVLAAEKKVT 36


>gi|255021969|ref|ZP_05293977.1| parB-like partition protein [Acidithiobacillus caldus ATCC 51756]
 gi|254968605|gb|EET26159.1| parB-like partition protein [Acidithiobacillus caldus ATCC 51756]
          Length = 434

 Score = 34.2 bits (77), Expect = 9.6,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 31/107 (28%), Gaps = 1/107 (0%)

Query: 67  DAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGD 126
           D   L +  E  LE      +         +R+    R   A  +  D        G   
Sbjct: 60  DGQRLEDLAESILEHGILNPITVEKVGENRYRIVSGERRYRAATIARDSGKPCARAGYDL 119

Query: 127 VLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADIC 173
              P   +   G      +     +     S ++IA +A+ I  D C
Sbjct: 120 TKIPAIVIQTQGGQNRLEMQLVENIAREDMSDDDIA-EALHILMDTC 165


>gi|291241559|ref|XP_002740670.1| PREDICTED: proteasome alpha 2 subunit-like isoform 2 [Saccoglossus
           kowalevskii]
          Length = 214

 Score = 34.2 bits (77), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 55/158 (34%), Gaps = 19/158 (12%)

Query: 19  LTVRKDGVVVIAGDGQVSLGQTVMK--ANARKVRRLGKGNIIAGFAGSSADAFTLLERLE 76
           + ++    VV+A + +    ++V+    +  KV  + K   +  ++G   D   L+ +  
Sbjct: 35  VGIKASNGVVVATEKK---QKSVLYDEQSVHKVESMTKNIGMI-YSGMGPDYRVLVRKAR 90

Query: 77  KKLEQYPN---------QLLRSSVELAKDWRMDKYLRNLEAMILIA----DKTITLVITG 123
           K  +QY           QL++    + +++     +R     +L+A    D+    +   
Sbjct: 91  KIAQQYYLIYQEQIPTSQLVQRVATVMQEYTQSGGVRPFGVSLLVAGWDEDEKKPYLFQC 150

Query: 124 MGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEI 161
                       A+G       +        Q + + I
Sbjct: 151 DPSGAYFAWKATAMGKNFVNGKTFLEKSFEGQMTEDNI 188


>gi|254561408|ref|YP_003068503.1| hypothetical protein METDI2991 [Methylobacterium extorquens DM4]
 gi|254268686|emb|CAX24645.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 267

 Score = 34.2 bits (77), Expect = 9.7,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 51/147 (34%), Gaps = 10/147 (6%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLG--QTVMKANARKVRRLGKGNIIAGFAGSSADAFTLLE 73
           T  + V  +  +V+  D + + G                 +  ++   AG+ +   ++L 
Sbjct: 21  TYCVGVLVEDGLVMIADTRTNAGLDNISTFRKLHMFNTPNERVMMLASAGNLSMTQSVLS 80

Query: 74  RLEKKLE----QYPNQLLRSSVELAKDWRMDKYLRNLE----AMILIADKTITLVITGMG 125
            L + ++    + P +L  ++        + + +R +     A    A+  + +     G
Sbjct: 81  MLREGVDDIEGETPAKLEDAATMFKAAQLVGRAIRRVREIEAAGFEAANLRMEVSFLFGG 140

Query: 126 DVLEPENGVMAIGSGGSYALSAARALM 152
            +      +  I S G++   +  A  
Sbjct: 141 QIGTEPMRLFMIYSAGNFIECSREAPF 167


>gi|227205708|dbj|BAH56674.1| putative transcriptional regulator [Rhodococcus sp. HI-31]
          Length = 608

 Score = 34.2 bits (77), Expect = 9.7,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 1/124 (0%)

Query: 47  RKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
           R V  +    ++      +         L +KL  +      S          +  +R L
Sbjct: 229 RPVLVMNSETVMTDLPSLAHLDAESHAVLWEKLRLHHWDDD-SLKLELPMLGTEAMVRRL 287

Query: 107 EAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 A   +  +        E +  V   GSG    L    A    Q S  E+ ++ +
Sbjct: 288 GRGGQDAIFALEFLAPAGAAPSEQDAVVSETGSGTVPLLRGGAASPRPQQSPYEVVQRQL 347

Query: 167 SIAA 170
           + AA
Sbjct: 348 TTAA 351


>gi|38906703|gb|AAR27821.1| putative regulator [Rhodococcus sp. TK6]
          Length = 608

 Score = 34.2 bits (77), Expect = 9.7,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 37/124 (29%), Gaps = 1/124 (0%)

Query: 47  RKVRRLGKGNIIAGFAGSSADAFTLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNL 106
           R V  +    ++      +         L +KL  +      S          +  +R L
Sbjct: 229 RPVLVMNSETVMTDLPSLAHLDAESHAVLWEKLRLHHWDDD-SLKLELPMLGTEAMVRRL 287

Query: 107 EAMILIADKTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAM 166
                 A   +  +        E +  V   GSG    L    A    Q S  E+ ++ +
Sbjct: 288 GRGGQDAIFALEFLAPAGAAPSEQDAVVSETGSGTVPLLRGGAASPRPQQSPYEVVQRQL 347

Query: 167 SIAA 170
           + AA
Sbjct: 348 TTAA 351


>gi|302186550|ref|ZP_07263223.1| hypothetical protein Psyrps6_09393 [Pseudomonas syringae pv.
           syringae 642]
          Length = 147

 Score = 34.2 bits (77), Expect = 9.9,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 50/174 (28%), Gaps = 34/174 (19%)

Query: 16  TTILTVRKDGVVVIAGDGQVSLGQTVMKANARK-VRRLGKGNIIAGFAGSSADAFTLLER 74
           TTI        V IA D +++ G  +      K V R G   ++ G              
Sbjct: 2   TTI---AYKDGV-IAYDSRITFGTIIETDTYEKLVEREGVKFVLTGATAD---------- 47

Query: 75  LEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLEPENGV 134
             + +E +     R+    A                +  +       T +         V
Sbjct: 48  FSRLIECFFGAKHRNVDCSAIA------FDGQAMWCVGHNNRDGFWKTPLSHSS-----V 96

Query: 135 MAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETLKVG 188
            A+GSG  +AL        T       A +A+ +A      T   +    ++  
Sbjct: 97  YAMGSGMPHAL--------TAMDMGATAAEAIEMAKKRDTCTGGKVRTVVIREE 142


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.314    0.141    0.377 

Lambda     K      H
   0.267   0.0434    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,588,087,640
Number of Sequences: 14124377
Number of extensions: 69428878
Number of successful extensions: 193954
Number of sequences better than 10.0: 5843
Number of HSP's better than 10.0 without gapping: 4257
Number of HSP's successfully gapped in prelim test: 1586
Number of HSP's that attempted gapping in prelim test: 184790
Number of HSP's gapped (non-prelim): 5968
length of query: 190
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 59
effective length of database: 2,992,500,243
effective search space: 176557514337
effective search space used: 176557514337
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 77 (34.2 bits)