RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1iru
>1iru_A 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4 Length = 246
Score = 38.4 bits (89), Expect = 0.001
Identities = 32/185 (17%), Positives = 55/185 (29%), Gaps = 12/185 (6%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
A+ T + VR VI +V + ++ + NI G +AD+
Sbjct: 31 AINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSS-TVTHLFKITE-NIGCVMTGMTADSR 88
Query: 70 TLLERL--EKKLEQYPNQLLRSSVELAKDWR--MDKYLRNLEAMILIADKTITLVITGMG 125
+ ++R E +Y L K Y +N E L +++ G+
Sbjct: 89 SQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPL----GCCMILIGID 144
Query: 126 DVLEPENGVMAIGSGGSYALSAARALMSTQNSAEEIARKAMSIAADICVYTNHNIVLETL 185
+ P+ V G Y A A Q + K + D + L
Sbjct: 145 EEQGPQ--VYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
Query: 186 KVGDE 190
Sbjct: 203 STVLS 207