RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1iru
>1iru_B 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4 Length = 233
Score = 42.6 bits (100), Expect = 5e-05
Identities = 26/180 (14%), Positives = 57/180 (31%), Gaps = 20/180 (11%)
Query: 9 YAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
YA+ + ++ VV+A + + + + KV + K +I ++G
Sbjct: 23 YALAAVAGGAPSVGIKAANGVVLATEKKQKSI-LYDERSVHKVEPITK-HIGLVYSGMGP 80
Query: 67 DAFTLLERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA---D 114
D L+ R K +QY QL++ + +++ +R +LI +
Sbjct: 81 DYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNE 140
Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
L + A+G + + A A + + +
Sbjct: 141 GRPYLFQSDPSGAYFAWKAT-AMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFE 199