RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1iru
>1iru_G 20S proteasome; cell cycle, immune response, proteolysis, ubiquitin, hydrolase; 2.75A {Bos taurus} SCOP: d.153.1.4 Length = 254
Score = 44.2 bits (104), Expect = 2e-05
Identities = 27/187 (14%), Positives = 60/187 (32%), Gaps = 20/187 (10%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
AV+ +++T + +R VV + V + + + +++ + + ++ AG ADA
Sbjct: 29 AVE-NSSTAIGIRCKDGVVFGVEKLVL-SKLYEEGSNKRLFNVDR-HVGMAVAGLLADAR 85
Query: 70 TLLERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA----DKT 116
+L + ++ + L + + +R ++ +
Sbjct: 86 SLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDG 145
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADIC 173
L + V G AIG A + L T + K + I D
Sbjct: 146 AQLYMIDPSGVSYGYWG-CAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKIIYIVHDEV 204
Query: 174 VYTNHNI 180
+
Sbjct: 205 KDKAFEL 211