RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1j2p
>1j2p_A Alpha-ring, proteasome alpha subunit; hydrolase; 2.60A {Archaeoglobus fulgidus} SCOP: d.153.1.4 PDB: 1j2q_A* Length = 246
Score = 46.9 bits (111), Expect = 3e-06
Identities = 31/179 (17%), Positives = 64/179 (35%), Gaps = 19/179 (10%)
Query: 9 YAVKM--HATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
YA + T + ++ V++ D +V + K K+ ++ + +I A +G A
Sbjct: 26 YAREAVKRGATAIGIKCKEGVILIADKRVGSKL-LEKDTIEKIYKIDE-HICAATSGLVA 83
Query: 67 DAFTLLERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA--DK 115
DA L++R + + +L + + + + +R +LIA ++
Sbjct: 84 DARVLIDRARIEAQINRLTYDIPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVNE 143
Query: 116 TITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAAD 171
L T L AIG G + + A + AM ++ +
Sbjct: 144 VPKLYETDPSGALLEYKA-TAIGMGRMAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIE 201