RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1ryp

>1ryp_C 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1jd2_B* 1g65_B 2f16_B* 2fak_B* 2fny_B* 2gpl_B* 3d29_B* 3dy3_B* 3dy4_B* 3e47_B* 3gpj_B* 3gpt_B* 3gpw_B* 3hye_B* 3bdm_B* 1z7q_C* 2zcy_B* 1g0u_B 1fnt_C Length = 244

 Score = 42.4 bits (99), Expect = 7e-05
 Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 18/198 (9%)

Query: 9   YAVK--MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSA 66
           YA++   HA T + +     +V+A + +V+        +  K+ +L    I    AG +A
Sbjct: 23  YALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLND-KIAVAVAGLTA 81

Query: 67  DAFTLLERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA---D 114
           DA  L+       + Y            L+R   ++ + +     LR      + A   D
Sbjct: 82  DAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDD 141

Query: 115 KTITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMSTQNSAEE---IARKAMSIAAD 171
           +    + T            +++G+  S A +  +         ++   +A K +S   D
Sbjct: 142 RYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTD 201

Query: 172 ICVYTNHNIVLETLKVGD 189
               T   +   T++ G 
Sbjct: 202 SSALTYDRLEFATIRKGA 219