RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1ryp
>1ryp_F 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1jd2_E* 1g65_E 2f16_E* 2fak_E* 2fny_E* 2gpl_E* 3d29_E* 3dy3_E* 3dy4_E* 3e47_E* 3gpj_E* 3gpt_E* 3gpw_E* 3hye_E* 3bdm_E* 1z7q_F 1fnt_F* 2zcy_E* 1g0u_E Length = 233
Score = 36.6 bits (84), Expect = 0.003
Identities = 24/191 (12%), Positives = 57/191 (29%), Gaps = 27/191 (14%)
Query: 10 AVKMHATTILTVR-KDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADA 68
A+K + + +R V+ + + + + +K+ + + ++ AG + DA
Sbjct: 27 AIK-QGSVTVGLRSNTH-AVLVALKRNADE---LSSYQKKIIKCDE-HMGLSLAGLAPDA 80
Query: 69 FTLLERLEKKLEQY---------PNQLLRSSVELAKDWRMDKYLRNLEAMILIA---DKT 116
L L ++ + + A+ R +LI
Sbjct: 81 RVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSG 140
Query: 117 ITLVITGMGDVLEPENGVMAIGSGGSYALSAARALMS-------TQNSAEEIARKAMSIA 169
L+ + G IG+ A + + + + +A+S +
Sbjct: 141 AHLLEFQPSGNVTELYGTA-IGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQS 199
Query: 170 ADICVYTNHNI 180
T N+
Sbjct: 200 LRDESLTVDNL 210