RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1ryp
>1ryp_M 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1fnt_M* 1jd2_L* 1g65_L 1z7q_M 2f16_L* 2fak_L* 2fny_L* 2gpl_L* 3d29_L* 3dy3_L* 3dy4_L* 3e47_L* 3gpj_L* 3gpt_L* 3gpw_L* 3hye_L* 1g0u_L 2zcy_L* 3bdm_L* Length = 222
Score = 90.3 bits (223), Expect = 3e-19
Identities = 29/203 (14%), Positives = 59/203 (29%), Gaps = 32/203 (15%)
Query: 13 MHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAFTLL 72
+ TIL + + V+AGD + ++ KV G NI+ G +AD L+
Sbjct: 7 DNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGD-NIVMSANGFAADGDALV 65
Query: 73 ERLEKKLEQYPNQLLRSSVELAKDWR----------MDKYLRNLEAMILIADKTITLVIT 122
+R + ++ Y + + R Y + L D +
Sbjct: 66 KRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSF 125
Query: 123 GMGDVLEPENGVMAIGSGGSYALS--------------------AARALMSTQNSAEEIA 162
E E A G+ S + + ++
Sbjct: 126 DPVGSYEREQ-CRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLV 184
Query: 163 RKAMSIAADICVYTNHNIVLETL 185
R + + A + + + + +
Sbjct: 185 RDSFTSATERHIQVGDGLEILIV 207