RPSBLAST alignment of GI: 254780828 and protein with PDBid: 1yar
>1yar_H Proteasome beta subunit; proteasome 20S, PA26 proteasome activator 11S, hydrolase/hydrolase activator complex; 1.90A {Thermoplasma acidophilum} SCOP: d.153.1.4 PDB: 1ya7_H 1yau_H 1pma_B 3jrm_H 3c92_H 3c91_H 3jse_H 3jtl_H Length = 217
Score = 62.6 bits (151), Expect = 6e-11
Identities = 32/189 (16%), Positives = 69/189 (36%), Gaps = 11/189 (5%)
Query: 10 AVKMHATTILTVRKDGVVVIAGDGQVSLGQTVMKANARKVRRLGKGNIIAGFAGSSADAF 69
++ TT + + V++A + +V++ +M N +K+ ++ AG DA
Sbjct: 4 TLE-TGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDT-YTGMTIAGLVGDAQ 61
Query: 70 TLLERLEKKLEQYPNQLLRSSVELAKDWRMDKYLRNLEAMILIADKTITLVITGMGDVLE 129
L+ ++ +LE Y Q + A + L ++ M + + + T
Sbjct: 62 VLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSI 121
Query: 130 PENG------VMAIGSGGSYALSAARALMS---TQNSAEEIARKAMSIAADICVYTNHNI 180
G + GSG + + S T + ++ +A+S A + I
Sbjct: 122 DAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMI 181
Query: 181 VLETLKVGD 189
+ + D
Sbjct: 182 DVAVITRKD 190