HHsearch alignment for GI: 254780829 and conserved domain: CHL00195

Probab=99.79  E-value=1.7e-19  Score=145.77  Aligned_cols=189  Identities=13%  Similarity=0.033  Sum_probs=121.7

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             56686699679888689999999997078779714341012122343101346788876521278998565498888688
Q gi|254780829|r   51 LMPKNILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQASINA  130 (437)
Q Consensus        51 ~~psNiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~~~~~~  130 (437)
T Consensus       257 ~~PkGvLL~GpPG~GKtl~AKAvA~e~~~p~l~l~~~~l~~~-~vG----esE~~~r~~f~~A~~~aP~ilfiDEidk~~  331 (491)
T CHL00195        257 PTPRGLLLVGIQGTGKSLTAKAIANEWNLPLLRLDVGKLFGG-IVG----ESESRMRQMIQLAETISPCILWIDEIDKAF  331 (491)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHH-HCC----HHHHHHHHHHHHHHHHCCEEEEEEHHHHHC
T ss_conf             999879997999987899999998663894699667997560-067----049999999999986198589974654542


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEE
Q ss_conf             87555531143211004668988986168888549987535545544334667666321000110100135432210000
Q gi|254780829|r  131 EERILDALVGKTATSNTREVFRKKLRDGEISDKEIDIEVADTSSDISNFDIPGGASVGILNLSELFSKVMGSGRKKKIRM  210 (437)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (437)
T Consensus       332 ~~~~~--~~d~g~s~rv~~~~Lt~m~--e~~~~VfViattN~~~~L~p--ellR~GRFD~~~~v~lP~~~~R~~I~~ihl  405 (491)
T CHL00195        332 SGLDS--KGDSGTSNRVLATFITWLS--EKKSPVFVVATANNIDSLPL--ELLRKGRFDEIFFLDLPNLEERELIFKIHL  405 (491)
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHC--CCCCCEEEEEECCCCCCCCH--HHCCCCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf             58888--8887232899999999864--68997699995899755898--770898777047648959899999999998


Q ss_pred             EH--HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             01--02355332788863031011123678887532221002
Q gi|254780829|r  211 SV--QKCYPELMRDESDRLIDMDTVHRDSIQMVENYGIVFLD  250 (437)
Q Consensus       211 ~~--~~a~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~f~~  250 (437)
T Consensus       406 ~~~~~~~~~~~d~~~la~~t~gfsGAeIe~~v~~A~~~A~~~  447 (491)
T CHL00195        406 KRFRPNSWQNYDIEILSQLTNKFSGAEIEQSIIEAMHHAFSE  447 (491)
T ss_pred             HCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             544788755469999997685988899999999999999875