HHsearch alignment for GI: 254780829 and conserved domain: COG1219

>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones].
Probab=97.42  E-value=3.1e-05  Score=53.38  Aligned_cols=69  Identities=38%  Similarity=0.612  Sum_probs=57.6

Q ss_pred             HHHHHHHHHCCCCCHHCCCCCCCC--CCCCCCCHHHHHHHCCCCCCCCCC-----------CCCCCCCHHHHHHCCCCCC
Q ss_conf             875322210022210013576656--543321012234320466522112-----------4666420246640167542
Q gi|254780829|r  240 MVENYGIVFLDEFDKIVARDSGNG--IGVSREGVQRDLLPLVEGSSVSTK-----------YGSINTDHILFIASGAFHV  306 (437)
Q Consensus       240 ~~~~~~~~f~~~~~ki~~~~~~~~--~~~~~~g~~~~~~~~~e~~~v~~~-----------~~~~~~~~~~~i~~~~~~~  306 (437)
T Consensus       159 ~rAerGIIyIDEIDKIarkSen~SITRDVSGEGVQQALLKiiEGTvasVPPqGGRKHP~Qe~iqvDT~NILFIcgGAF~G  238 (408)
T COG1219         159 ERAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEFIQVDTSNILFICGGAFAG  238 (408)
T ss_pred             HHHHCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEECCCCEEEEECCCCCC
T ss_conf             88828859985102542057898723436735899999999707510239998887984204887376346782440103


Q ss_pred             CC
Q ss_conf             21
Q gi|254780829|r  307 SR  308 (437)
Q Consensus       307 ~k  308 (437)
T Consensus       239 le  240 (408)
T COG1219         239 LE  240 (408)
T ss_pred             HH
T ss_conf             99