HHsearch alignment for GI: 254780829 and conserved domain: COG1223
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=99.84 E-value=2.3e-21 Score=157.87 Aligned_cols=159 Identities=25% Similarity=0.375 Sum_probs=121.6
Q ss_pred CHHHHHHH------HHHCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCE
Q ss_conf 88999998------620304868999999999987788640864444665668669967988868999999999707877
Q gi|254780829|r 8 SPREIVSE------LDRYIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAPF 81 (437)
Q Consensus 8 tP~~i~~~------Ld~~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VPF 81 (437)
T Consensus 106 ~~~~~~~e~~~~it~d-dViGqEeAK~kcrli~--~y--LenPe~F-g~WAPknVLFyGppGTGKTm~Akalane~kvp~ 179 (368)
T COG1223 106 TPREEDREIISDITLD-DVIGQEEAKRKCRLIM--EY--LENPERF-GDWAPKNVLFYGPPGTGKTMMAKALANEAKVPL 179 (368)
T ss_pred CCCHHHHHHHCCCCHH-HHHCHHHHHHHHHHHH--HH--HHCHHHH-CCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCE
T ss_conf 7514555661366176-6416398888879999--99--6496876-345754168778999648799998725457854
Q ss_pred EEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 97143410121223431013467888765212789985654988886888755553114321100466898898616888
Q gi|254780829|r 82 IKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQASINAEERILDALVGKTATSNTREVFRKKLRDGEIS 161 (437)
Q Consensus 82 ~~~daT~ftE~gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (437)
T Consensus 180 l~vkat~li-----GehVGdgar~Ihely~rA~~~aPcivFiDE~DAiaLdRryQelRGDV--sEiVNALLTelDgi~en 252 (368)
T COG1223 180 LLVKATELI-----GEHVGDGARRIHELYERARKAAPCIVFIDELDAIALDRRYQELRGDV--SEIVNALLTELDGIKEN 252 (368)
T ss_pred EEECHHHHH-----HHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHCCCCCCC
T ss_conf 871168888-----87743598999999998875198499840024555304578864549--99999999850174457
Q ss_pred CCEEEEEECCCCCCCCCC
Q ss_conf 854998753554554433
Q gi|254780829|r 162 DKEIDIEVADTSSDISNF 179 (437)
Q Consensus 162 ~~~i~i~~~~~~~~~~~~ 179 (437)
T Consensus 253 eGVvtIaaTN~p~~LD~a 270 (368)
T COG1223 253 EGVVTIAATNRPELLDPA 270 (368)
T ss_pred CCEEEEEECCCHHHCCHH
T ss_conf 756999505984650788