HHsearch alignment for GI: 254780829 and conserved domain: COG1223

>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=99.84  E-value=2.3e-21  Score=157.87  Aligned_cols=159  Identities=25%  Similarity=0.375  Sum_probs=121.6

Q ss_pred             CHHHHHHH------HHHCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCE
Q ss_conf             88999998------620304868999999999987788640864444665668669967988868999999999707877
Q gi|254780829|r    8 SPREIVSE------LDRYIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAPF   81 (437)
Q Consensus         8 tP~~i~~~------Ld~~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VPF   81 (437)
T Consensus       106 ~~~~~~~e~~~~it~d-dViGqEeAK~kcrli~--~y--LenPe~F-g~WAPknVLFyGppGTGKTm~Akalane~kvp~  179 (368)
T COG1223         106 TPREEDREIISDITLD-DVIGQEEAKRKCRLIM--EY--LENPERF-GDWAPKNVLFYGPPGTGKTMMAKALANEAKVPL  179 (368)
T ss_pred             CCCHHHHHHHCCCCHH-HHHCHHHHHHHHHHHH--HH--HHCHHHH-CCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCE
T ss_conf             7514555661366176-6416398888879999--99--6496876-345754168778999648799998725457854


Q ss_pred             EEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             97143410121223431013467888765212789985654988886888755553114321100466898898616888
Q gi|254780829|r   82 IKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQASINAEERILDALVGKTATSNTREVFRKKLRDGEIS  161 (437)
Q Consensus        82 ~~~daT~ftE~gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  161 (437)
T Consensus       180 l~vkat~li-----GehVGdgar~Ihely~rA~~~aPcivFiDE~DAiaLdRryQelRGDV--sEiVNALLTelDgi~en  252 (368)
T COG1223         180 LLVKATELI-----GEHVGDGARRIHELYERARKAAPCIVFIDELDAIALDRRYQELRGDV--SEIVNALLTELDGIKEN  252 (368)
T ss_pred             EEECHHHHH-----HHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHCCCCCCC
T ss_conf             871168888-----87743598999999998875198499840024555304578864549--99999999850174457


Q ss_pred             CCEEEEEECCCCCCCCCC
Q ss_conf             854998753554554433
Q gi|254780829|r  162 DKEIDIEVADTSSDISNF  179 (437)
Q Consensus       162 ~~~i~i~~~~~~~~~~~~  179 (437)
T Consensus       253 eGVvtIaaTN~p~~LD~a  270 (368)
T COG1223         253 EGVVTIAATNRPELLDPA  270 (368)
T ss_pred             CCEEEEEECCCHHHCCHH
T ss_conf             756999505984650788