HHsearch alignment for GI: 254780829 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=98.47  E-value=0.00011  Score=49.70  Aligned_cols=74  Identities=19%  Similarity=0.291  Sum_probs=54.3

Q ss_pred             EECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC-----EEEEECCCEEECCC
Q ss_conf             0486899999999998778864086444466566866996798886899999999970787-----79714341012122
Q gi|254780829|r   20 IIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAP-----FIKVEVTKFTEIGY   94 (437)
Q Consensus        20 VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VP-----F~~~daT~ftE~gy   94 (437)
T Consensus        19 l~~Re~ei~~l~~~l~~~~----------~~~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t~~-   87 (366)
T COG1474          19 LPHREEEINQLASFLAPAL----------RGERPSNIIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRTPY-   87 (366)
T ss_pred             CCCHHHHHHHHHHHHHHHH----------CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHH-
T ss_conf             1034889999999999985----------58998607998899987328999999999733156757999513078787-


Q ss_pred             CCCCHHHHHHHHHHHH
Q ss_conf             3431013467888765
Q gi|254780829|r   95 VGRNVEQIIRDLVDVA  110 (437)
Q Consensus        95 vG~DVes~i~~l~~~a  110 (437)
T Consensus        88 ------~i~~~i~~~~   97 (366)
T COG1474          88 ------QVLSKILNKL   97 (366)
T ss_pred             ------HHHHHHHHHH
T ss_conf             ------9999999982