HHsearch alignment for GI: 254780829 and conserved domain: COG1484
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=97.78 E-value=2.8e-05 Score=53.58 Aligned_cols=37 Identities=27% Similarity=0.522 Sum_probs=28.5
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH---CCCEEEEECCC
Q ss_conf 66866996798886899999999970---78779714341
Q gi|254780829|r 52 MPKNILLVGPTGVGKTAISRRLARLA---GAPFIKVEVTK 88 (437)
Q Consensus 52 ~psNiLLiGPtGtGKTlLAktLA~~l---~VPF~~~daT~ 88 (437)
T Consensus 104 ~~~nl~l~G~~G~GKthLa~Ai~~~l~~~g~sv~f~~~~e 143 (254)
T COG1484 104 RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPD 143 (254)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHH
T ss_conf 5882899899998799999999999998398499988599