HHsearch alignment for GI: 254780829 and conserved domain: KOG0478
>KOG0478 consensus.
Probab=95.54 E-value=0.031 Score=33.85 Aligned_cols=98 Identities=21% Similarity=0.184 Sum_probs=52.0
Q ss_pred EECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------CCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEC
Q ss_conf 0486899999999998778864086444466566-------866996798886899999999970787797143410121
Q gi|254780829|r 20 IIGQQDAKRAVAIALRNRWRRQQLPADLRDELMP-------KNILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEI 92 (437)
Q Consensus 20 VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~p-------sNiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~ 92 (437)
T Consensus 431 Iye~edvKkglLLqL---------fGGt~k~~~~~~~~R~~INILL~GDPGtsKSqlLqyv~~l~pR-g~yTSGkGsSav 500 (804)
T KOG0478 431 IYELEDVKKGLLLQL---------FGGTRKEDEKSGRFRGDINILLVGDPGTSKSQLLQYCHRLLPR-GVYTSGKGSSAV 500 (804)
T ss_pred HHCCCCHHHHHHHHH---------HCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC-CEEECCCCCCHH
T ss_conf 534422666677887---------5687632233444245522899469986789999999974775-404058763022
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---22343101346788876521278998565498888688
Q gi|254780829|r 93 ---GYVGRNVEQIIRDLVDVAINIVRESRRDEVREQASINA 130 (437)
Q Consensus 93 ---gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~~~~~~ 130 (437)
T Consensus 501 GLTayVtrd~dtk--qlVLes-GALVLSD~GiCCIDEFDKM 538 (804)
T KOG0478 501 GLTAYVTKDPDTR--QLVLES-GALVLSDNGICCIDEFDKM 538 (804)
T ss_pred CCEEEEEECCCCC--EEEEEC-CCEEECCCCEEECHHHHHH
T ss_conf 0035677657655--466504-8489728965771123333