HHsearch alignment for GI: 254780829 and conserved domain: KOG0478

>KOG0478 consensus.
Probab=95.54  E-value=0.031  Score=33.85  Aligned_cols=98  Identities=21%  Similarity=0.184  Sum_probs=52.0

Q ss_pred             EECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------CCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEC
Q ss_conf             0486899999999998778864086444466566-------866996798886899999999970787797143410121
Q gi|254780829|r   20 IIGQQDAKRAVAIALRNRWRRQQLPADLRDELMP-------KNILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEI   92 (437)
Q Consensus        20 VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~p-------sNiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~   92 (437)
T Consensus       431 Iye~edvKkglLLqL---------fGGt~k~~~~~~~~R~~INILL~GDPGtsKSqlLqyv~~l~pR-g~yTSGkGsSav  500 (804)
T KOG0478         431 IYELEDVKKGLLLQL---------FGGTRKEDEKSGRFRGDINILLVGDPGTSKSQLLQYCHRLLPR-GVYTSGKGSSAV  500 (804)
T ss_pred             HHCCCCHHHHHHHHH---------HCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC-CEEECCCCCCHH
T ss_conf             534422666677887---------5687632233444245522899469986789999999974775-404058763022


Q ss_pred             ---CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             ---22343101346788876521278998565498888688
Q gi|254780829|r   93 ---GYVGRNVEQIIRDLVDVAINIVRESRRDEVREQASINA  130 (437)
Q Consensus        93 ---gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~~~~~~  130 (437)
T Consensus       501 GLTayVtrd~dtk--qlVLes-GALVLSD~GiCCIDEFDKM  538 (804)
T KOG0478         501 GLTAYVTKDPDTR--QLVLES-GALVLSDNGICCIDEFDKM  538 (804)
T ss_pred             CCEEEEEECCCCC--EEEEEC-CCEEECCCCEEECHHHHHH
T ss_conf             0035677657655--466504-8489728965771123333