HHsearch alignment for GI: 254780829 and conserved domain: KOG0735
>KOG0735 consensus.
Probab=98.26 E-value=3.3e-06 Score=59.65 Aligned_cols=76 Identities=25% Similarity=0.203 Sum_probs=60.4
Q ss_pred CCCCCCEEEECCCCCCHHHHHHHHHHHH----CCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6566866996798886899999999970----787797143410121223431013467888765212789985654988
Q gi|254780829|r 50 ELMPKNILLVGPTGVGKTAISRRLARLA----GAPFIKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQ 125 (437)
Q Consensus 50 e~~psNiLLiGPtGtGKTlLAktLA~~l----~VPF~~~daT~ftE~gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~ 125 (437)
T Consensus 428 v~~~~~Ill~G~~GsGKT~L~kal~~~~~k~~~~hv~~v~Cs~l~~~~-----~e~iQk~l~~vfse~~~~~PSiIvLDd 502 (952)
T KOG0735 428 VFRHGNILLNGPKGSGKTNLVKALFDYYSKDLIAHVEIVSCSTLDGSS-----LEKIQKFLNNVFSEALWYAPSIIVLDD 502 (952)
T ss_pred CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHCCCHH-----HHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 334661898679987776999999987515650699997522104204-----899999999999998863780899705
Q ss_pred HHHHH
Q ss_conf 88688
Q gi|254780829|r 126 ASINA 130 (437)
Q Consensus 126 ~~~~~ 130 (437)
T Consensus 503 ld~l~ 507 (952)
T KOG0735 503 LDCLA 507 (952)
T ss_pred HHHHH
T ss_conf 03540