HHsearch alignment for GI: 254780829 and conserved domain: KOG0736

Probab=99.64  E-value=1e-16  Score=127.85  Aligned_cols=101  Identities=21%  Similarity=0.241  Sum_probs=78.7

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             68669967988868999999999707877971434101212234310134678887652127899856549888868887
Q gi|254780829|r   53 PKNILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQASINAEE  132 (437)
Q Consensus        53 psNiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~~~~~~~~  132 (437)
T Consensus       705 RSGILLYGPPGTGKTLlAKAVATEcsL~FlSVKGPELLNM-YVGqSE~N----VR~VFerAR~A~PCVIFFDELDSlAP~  779 (953)
T KOG0736         705 RSGILLYGPPGTGKTLLAKAVATECSLNFLSVKGPELLNM-YVGQSEEN----VREVFERARSAAPCVIFFDELDSLAPN  779 (953)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCEEEEEEECCHHHHHH-HHCCHHHH----HHHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf             3505887799985579999987543036785058899887-74301888----999999854469749983121232756


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             555531143211004668988986168
Q gi|254780829|r  133 RILDALVGKTATSNTREVFRKKLRDGE  159 (437)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~l~~~~  159 (437)
T Consensus       780 RG~sGDSGGVMDR-VVSQLLAELDgls  805 (953)
T KOG0736         780 RGRSGDSGGVMDR-VVSQLLAELDGLS  805 (953)
T ss_pred             CCCCCCCCCCHHH-HHHHHHHHHHCCC
T ss_conf             7887886540899-9999999862666