HHsearch alignment for GI: 254780829 and conserved domain: KOG0741

>KOG0741 consensus.
Probab=99.27  E-value=1.2e-11  Score=94.84  Aligned_cols=192  Identities=17%  Similarity=0.085  Sum_probs=118.0

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHHHCCC-EEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH-----HHHHHHHHH
Q ss_conf             6866996798886899999999970787-7971434101212234310134678887652127899-----856549888
Q gi|254780829|r   53 PKNILLVGPTGVGKTAISRRLARLAGAP-FIKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRES-----RRDEVREQA  126 (437)
Q Consensus        53 psNiLLiGPtGtGKTlLAktLA~~l~VP-F~~~daT~ftE~gyvG~DVes~i~~l~~~a~~~~~~a-----~~~i~~~~~  126 (437)
T Consensus       256 VKGiLLyGPPGTGKTLiARqIGkMLNArePKIVNGPeIL~K-YVGeSE~NvR~-LFaDAEeE~r~~g~~SgLHIIIFDEi  333 (744)
T KOG0741         256 VKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNK-YVGESEENVRK-LFADAEEEQRRLGANSGLHIIIFDEI  333 (744)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH-HHCCCHHHHHH-HHHHHHHHHHHHCCCCCCEEEEEHHH
T ss_conf             23578877999870189999878745799863475788987-60630788999-98757999984376677259996346


Q ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
Q ss_conf             86888755553114321100466898898616888854998753554554433466766632100011010013543221
Q gi|254780829|r  127 SINAEERILDALVGKTATSNTREVFRKKLRDGEISDKEIDIEVADTSSDISNFDIPGGASVGILNLSELFSKVMGSGRKK  206 (437)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (437)
T Consensus       334 DAICKqRGS~~g-~TGVhD~VVNQLLsKmDGVeqLNNILVIGMTNR~DlIDEAL--LRPGRlEVqmEIsLPDE~gRlQIl  410 (744)
T KOG0741         334 DAICKQRGSMAG-STGVHDTVVNQLLSKMDGVEQLNNILVIGMTNRKDLIDEAL--LRPGRLEVQMEISLPDEKGRLQIL  410 (744)
T ss_pred             HHHHHHCCCCCC-CCCCCHHHHHHHHHHCCCHHHHHCEEEEECCCCHHHHHHHH--CCCCCEEEEEEEECCCCCCCEEEE
T ss_conf             799974488789-88631899999998532287661678994047366678875--588716999998468876727888


Q ss_pred             EEEEEHHHHH----HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             0000010235----533278886303101112367888753222100
Q gi|254780829|r  207 KIRMSVQKCY----PELMRDESDRLIDMDTVHRDSIQMVENYGIVFL  249 (437)
Q Consensus       207 ~~~~~~~~a~----~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~f~  249 (437)
T Consensus       411 ~IHT~rMre~~~l~~dVdl~elA~lTKNfSGAEleglVksA~S~A~n  457 (744)
T KOG0741         411 KIHTKRMRENNKLSADVDLKELAALTKNFSGAELEGLVKSAQSFAMN  457 (744)
T ss_pred             EHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf             71445566517877776989999985578626789999988889888