HHsearch alignment for GI: 254780829 and conserved domain: KOG0741
>KOG0741 consensus.
Probab=99.27 E-value=1.2e-11 Score=94.84 Aligned_cols=192 Identities=17% Similarity=0.085 Sum_probs=118.0
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHHHCCC-EEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH-----HHHHHHHHH
Q ss_conf 6866996798886899999999970787-7971434101212234310134678887652127899-----856549888
Q gi|254780829|r 53 PKNILLVGPTGVGKTAISRRLARLAGAP-FIKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRES-----RRDEVREQA 126 (437)
Q Consensus 53 psNiLLiGPtGtGKTlLAktLA~~l~VP-F~~~daT~ftE~gyvG~DVes~i~~l~~~a~~~~~~a-----~~~i~~~~~ 126 (437)
T Consensus 256 VKGiLLyGPPGTGKTLiARqIGkMLNArePKIVNGPeIL~K-YVGeSE~NvR~-LFaDAEeE~r~~g~~SgLHIIIFDEi 333 (744)
T KOG0741 256 VKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNK-YVGESEENVRK-LFADAEEEQRRLGANSGLHIIIFDEI 333 (744)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH-HHCCCHHHHHH-HHHHHHHHHHHHCCCCCCEEEEEHHH
T ss_conf 23578877999870189999878745799863475788987-60630788999-98757999984376677259996346
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
Q ss_conf 86888755553114321100466898898616888854998753554554433466766632100011010013543221
Q gi|254780829|r 127 SINAEERILDALVGKTATSNTREVFRKKLRDGEISDKEIDIEVADTSSDISNFDIPGGASVGILNLSELFSKVMGSGRKK 206 (437)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (437)
T Consensus 334 DAICKqRGS~~g-~TGVhD~VVNQLLsKmDGVeqLNNILVIGMTNR~DlIDEAL--LRPGRlEVqmEIsLPDE~gRlQIl 410 (744)
T KOG0741 334 DAICKQRGSMAG-STGVHDTVVNQLLSKMDGVEQLNNILVIGMTNRKDLIDEAL--LRPGRLEVQMEISLPDEKGRLQIL 410 (744)
T ss_pred HHHHHHCCCCCC-CCCCCHHHHHHHHHHCCCHHHHHCEEEEECCCCHHHHHHHH--CCCCCEEEEEEEECCCCCCCEEEE
T ss_conf 799974488789-88631899999998532287661678994047366678875--588716999998468876727888
Q ss_pred EEEEEHHHHH----HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 0000010235----533278886303101112367888753222100
Q gi|254780829|r 207 KIRMSVQKCY----PELMRDESDRLIDMDTVHRDSIQMVENYGIVFL 249 (437)
Q Consensus 207 ~~~~~~~~a~----~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~f~ 249 (437)
T Consensus 411 ~IHT~rMre~~~l~~dVdl~elA~lTKNfSGAEleglVksA~S~A~n 457 (744)
T KOG0741 411 KIHTKRMRENNKLSADVDLKELAALTKNFSGAELEGLVKSAQSFAMN 457 (744)
T ss_pred EHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 71445566517877776989999985578626789999988889888