HHsearch alignment for GI: 254780829 and conserved domain: KOG1942

Probab=98.22  E-value=1.7e-06  Score=61.55  Aligned_cols=64  Identities=25%  Similarity=0.434  Sum_probs=48.2

Q ss_pred             HHCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH--CCCEEEEECCCE
Q ss_conf             2030486899999999998778864086444466566866996798886899999999970--787797143410
Q gi|254780829|r   17 DRYIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLA--GAPFIKVEVTKF   89 (437)
Q Consensus        17 d~~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l--~VPF~~~daT~f   89 (437)
T Consensus        37 ~~g~vGQ~~AReAagiivd-l---ik~Kk-----maGravLlaGppgtGKTAlAlaisqELG~kvPFcpmvgSEv  102 (456)
T KOG1942          37 AAGFVGQENAREAAGIIVD-L---IKSKK-----MAGRAVLLAGPPGTGKTALALAISQELGPKVPFCPMVGSEV  102 (456)
T ss_pred             CCCCCCCHHHHHHHHHHHH-H---HHHHH-----CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf             4451152666655108999-9---98663-----26727997369987656899999997479998566641055