HHsearch alignment for GI: 254780829 and conserved domain: KOG2004

Probab=98.61  E-value=1.1e-06  Score=62.67  Aligned_cols=53  Identities=34%  Similarity=0.646  Sum_probs=39.5

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEC--------CCCCCCHHHHHHHHHHHH
Q ss_conf             866996798886899999999970787797143410121--------223431013467888765
Q gi|254780829|r   54 KNILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEI--------GYVGRNVEQIIRDLVDVA  110 (437)
Q Consensus        54 sNiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~--------gyvG~DVes~i~~l~~~a  110 (437)
T Consensus       439 kIlCf~GPPGVGKTSI~kSIA~ALnRkFfRfSvGG~tDvAeIkGHRRTYVG----AMPGkiIq~L  499 (906)
T KOG2004         439 KILCFVGPPGVGKTSIAKSIARALNRKFFRFSVGGMTDVAEIKGHRRTYVG----AMPGKIIQCL  499 (906)
T ss_pred             CEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCEEEEC----CCCHHHHHHH
T ss_conf             379986899877321899999984874699853663427764254211001----4884899999