HHsearch alignment for GI: 254780829 and conserved domain: KOG2028

Probab=99.00  E-value=8.6e-09  Score=76.42  Aligned_cols=70  Identities=29%  Similarity=0.506  Sum_probs=48.3

Q ss_pred             CCCCHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC---E
Q ss_conf             7688899999862030486899999999998778864086444466566866996798886899999999970787---7
Q gi|254780829|r    5 FNFSPREIVSELDRYIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAP---F   81 (437)
Q Consensus         5 ~~ltP~~i~~~Ld~~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VP---F   81 (437)
T Consensus       130 ermRPk----tL~dy-vGQ~hlv~q-~gllrs~i------e---q~~ipS-mIlWGppG~GKTtlArlia~tsk~~Syrf  193 (554)
T KOG2028         130 ERMRPK----TLDDY-VGQSHLVGQ-DGLLRSLI------E---QNRIPS-MILWGPPGTGKTTLARLIASTSKKHSYRF  193 (554)
T ss_pred             HHCCCC----HHHHH-CCHHHHCCC-CHHHHHHH------H---CCCCCC-EEEECCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf             541843----68775-053441483-26899998------7---088870-58866998765889999986057774279


Q ss_pred             EEEECCCEE
Q ss_conf             971434101
Q gi|254780829|r   82 IKVEVTKFT   90 (437)
Q Consensus        82 ~~~daT~ft   90 (437)
T Consensus       194 velSAt~a~  202 (554)
T KOG2028         194 VELSATNAK  202 (554)
T ss_pred             EEEECCCCC
T ss_conf             997414566