HHsearch alignment for GI: 254780829 and conserved domain: KOG2543
>KOG2543 consensus.
Probab=96.87 E-value=0.0014 Score=42.64 Aligned_cols=44 Identities=25% Similarity=0.367 Sum_probs=38.3
Q ss_pred CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCC-EE
Q ss_conf 446656686699679888689999999997078779714341-01
Q gi|254780829|r 47 LRDELMPKNILLVGPTGVGKTAISRRLARLAGAPFIKVEVTK-FT 90 (437)
Q Consensus 47 ~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~-ft 90 (437)
T Consensus 24 ~~~~~~PS~~~iyG~sgTGKT~~~r~~l~~~n~~~vw~n~~ecft 68 (438)
T KOG2543 24 NNSCTIPSIVHIYGHSGTGKTYLVRQLLRKLNLENVWLNCVECFT 68 (438)
T ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEHHHHCC
T ss_conf 898666515799614787455999999860378630541577516