HHsearch alignment for GI: 254780829 and conserved domain: PRK00080

Probab=99.43  E-value=1.4e-12  Score=101.05  Aligned_cols=74  Identities=28%  Similarity=0.517  Sum_probs=59.1

Q ss_pred             CCCHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf             68889999986203048689999999999877886408644446656686699679888689999999997078779714
Q gi|254780829|r    6 NFSPREIVSELDRYIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAPFIKVE   85 (437)
Q Consensus         6 ~ltP~~i~~~Ld~~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VPF~~~d   85 (437)
T Consensus        18 ~lRP~----~l~ef-iGQ~~i~~~L~v~i~Aak~r--------~e~-ldH~Ll~GPPGlGKTTLA~iiA~E~~~~~~~ts   83 (328)
T PRK00080         18 SLRPK----SLDEF-IGQEKVKENLKIFIEAAKKR--------GEA-LDHVLLYGPPGLGKTTLANIIANEMGVNIRITS   83 (328)
T ss_pred             CCCCC----CHHHC-CCHHHHHHHHHHHHHHHHHC--------CCC-CCCEEEECCCCCCHHHHHHHHHHHHCCCCEECC
T ss_conf             55988----57663-59599999999999999964--------999-880576588998899999999998688815624


Q ss_pred             CCCEEECC
Q ss_conf             34101212
Q gi|254780829|r   86 VTKFTEIG   93 (437)
Q Consensus        86 aT~ftE~g   93 (437)
T Consensus        84 GP~lek~~   91 (328)
T PRK00080         84 GPALEKAG   91 (328)
T ss_pred             CCCCCCHH
T ss_conf             50016747