HHsearch alignment for GI: 254780829 and conserved domain: PRK00149

Probab=97.63  E-value=0.001  Score=43.57  Aligned_cols=66  Identities=24%  Similarity=0.410  Sum_probs=43.2

Q ss_pred             HHHCEECHHHHH-HHHHHHHHHHHHHHCCCCCCCCCCCCCC-EEEECCCCCCHHHHHHHHHHHH-----CCCEEEEECCC
Q ss_conf             620304868999-9999999877886408644446656686-6996798886899999999970-----78779714341
Q gi|254780829|r   16 LDRYIIGQQDAK-RAVAIALRNRWRRQQLPADLRDELMPKN-ILLVGPTGVGKTAISRRLARLA-----GAPFIKVEVTK   88 (437)
Q Consensus        16 Ld~~VvGQ~~AK-k~lavav~nhy~R~~~~~~~~~e~~psN-iLLiGPtGtGKTlLAktLA~~l-----~VPF~~~daT~   88 (437)
T Consensus       118 FdnFVvG~sN~lA~aAA~~V-------a~~pg-----~~yNPLfIyG~~GlGKTHLl~AIgn~~~~~~p~~~v~Y~tae~  185 (447)
T PRK00149        118 FDNFVVGKSNRLAHAAALAV-------AENPG-----KAYNPLFIYGGVGLGKTHLLHAIGNYILEKNPNAKVVYVSSEK  185 (447)
T ss_pred             CCCCEECCCCHHHHHHHHHH-------HHCCC-----CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHH
T ss_conf             32622269859999999999-------83767-----6778558977998878899999999999858997289954999


Q ss_pred             EEECC
Q ss_conf             01212
Q gi|254780829|r   89 FTEIG   93 (437)
Q Consensus        89 ftE~g   93 (437)
T Consensus       186 F~~~~  190 (447)
T PRK00149        186 FTNDF  190 (447)
T ss_pred             HHHHH
T ss_conf             99999