HHsearch alignment for GI: 254780829 and conserved domain: PRK04220

Probab=96.30  E-value=0.022  Score=34.81  Aligned_cols=69  Identities=32%  Similarity=0.405  Sum_probs=45.8

Q ss_pred             HHHHHHHHH---CEECHHHHHHHHHHHH-----------HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf             999998620---3048689999999999-----------87788640864444665668669967988868999999999
Q gi|254780829|r   10 REIVSELDR---YIIGQQDAKRAVAIAL-----------RNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLAR   75 (437)
Q Consensus        10 ~~i~~~Ld~---~VvGQ~~AKk~lavav-----------~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~   75 (437)
T Consensus        41 ~ei~~~L~~~~~~~i~~~el~~~v~~~l~~~~~~~~a~rY~~~r~~r~------~~~pliILigGtsGvGKSTlA~~LA~  114 (306)
T PRK04220         41 SEIEEELKKEGITKITKEELRRRVYYKLIEKDYEEIAEKYLLWRRIRK------SKEPIIILIGGASGVGTSTIAFELAS  114 (306)
T ss_pred             HHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC------CCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf             999999986577163599999999999998440999999999999853------69987999858998878999999999


Q ss_pred             HHCCCEEEE
Q ss_conf             707877971
Q gi|254780829|r   76 LAGAPFIKV   84 (437)
Q Consensus        76 ~l~VPF~~~   84 (437)
T Consensus       115 rLgI~~vis  123 (306)
T PRK04220        115 RLGIRSVIG  123 (306)
T ss_pred             HHCCCEEEC
T ss_conf             709883422