HHsearch alignment for GI: 254780829 and conserved domain: PRK05342

>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.

Probab=98.26  E-value=1.8e-07  Score=67.82  Aligned_cols=66  Identities=41%  Similarity=0.657  Sum_probs=56.1

Q ss_pred             HHHHHHHCCCCCHHCCCCCCC--CCCCCCCCHHHHHHHCCCCCCCCC-----------CCCCCCCCHHHHHHCCCCCCC
Q ss_conf             532221002221001357665--654332101223432046652211-----------246664202466401675422
Q gi|254780829|r  242 ENYGIVFLDEFDKIVARDSGN--GIGVSREGVQRDLLPLVEGSSVST-----------KYGSINTDHILFIASGAFHVS  307 (437)
Q Consensus       242 ~~~~~~f~~~~~ki~~~~~~~--~~~~~~~g~~~~~~~~~e~~~v~~-----------~~~~~~~~~~~~i~~~~~~~~  307 (437)
T Consensus       173 Ae~GIV~IDEIDKIarks~~~s~trDVSgEGVQqaLLkiiEGt~v~vp~~ggrkhp~~~~~~idT~nILFI~gGAF~GL  251 (411)
T PRK05342        173 AQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPQQEFIQVDTTNILFICGGAFDGL  251 (411)
T ss_pred             HHCCEEEEEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCH
T ss_conf             8368288850234542478888877765124899999987587141188877778776516761471799911553358