HHsearch alignment for GI: 254780829 and conserved domain: PRK05563
>PRK05563 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.96 E-value=1e-08 Score=75.87 Aligned_cols=48 Identities=21% Similarity=0.405 Sum_probs=40.2
Q ss_pred CEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 3048689999999999877886408644446656686699679888689999999997078
Q gi|254780829|r 19 YIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGA 79 (437)
Q Consensus 19 ~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~V 79 (437)
T Consensus 17 dvvgQ~~v~~~L~n~i~~----~---------~i~hayLf~GprG~GKTs~Ari~akalnc 64 (541)
T PRK05563 17 DVVGQEHITTTLKNQIIN----N---------RIAHAYLFCGTRGTGKTSTAKIFAKAVNC 64 (541)
T ss_pred HHCCCHHHHHHHHHHHHC----C---------CCCEEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 624849999999999984----9---------93204530387995899999999999579