HHsearch alignment for GI: 254780829 and conserved domain: PRK05896
>PRK05896 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.77 E-value=1.3e-07 Score=68.68 Aligned_cols=48 Identities=29% Similarity=0.535 Sum_probs=40.6
Q ss_pred CEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 3048689999999999877886408644446656686699679888689999999997078
Q gi|254780829|r 19 YIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGA 79 (437)
Q Consensus 19 ~VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~V 79 (437)
T Consensus 17 eIIGQe~iv~~L~nAI~----~~R---------iaHAYLFsGPrGvGKTTlArifAkaLnC 64 (613)
T PRK05896 17 QIIGQELIKKILVNAIL----NNK---------LTHAYIFSGPRGIGKTSIAKIFAKAINC 64 (613)
T ss_pred HHCCCHHHHHHHHHHHH----CCC---------CCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 52382999999999998----499---------7622775589984889999999999669