HHsearch alignment for GI: 254780829 and conserved domain: PRK08118
>PRK08118 topology modulation protein; Reviewed.
Probab=97.91 E-value=3.1e-05 Score=53.34 Aligned_cols=40 Identities=28% Similarity=0.572 Sum_probs=34.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCC
Q ss_conf 69967988868999999999707877971434101212234
Q gi|254780829|r 56 ILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVG 96 (437)
Q Consensus 56 iLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG 96 (437)
T Consensus 4 I~IiG~~GsGKSTlAr~L~~~~~ip~~~LD~-l~w~~~w~~ 43 (167)
T PRK08118 4 IILIGSGGSGKSTLARQLGEKLNIPVHHLDA-LFWKPNWEG 43 (167)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEECCC-EEECCCCCC
T ss_conf 9998899987999999999988969796443-476689946