HHsearch alignment for GI: 254780829 and conserved domain: PRK09183
>PRK09183 transposase/IS protein; Provisional.
Probab=98.13 E-value=1.9e-06 Score=61.19 Aligned_cols=26 Identities=46% Similarity=0.698 Sum_probs=24.1
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 66866996798886899999999970
Q gi|254780829|r 52 MPKNILLVGPTGVGKTAISRRLARLA 77 (437)
Q Consensus 52 ~psNiLLiGPtGtGKTlLAktLA~~l 77 (437)
T Consensus 100 ~~~Nvil~G~~GtGKThLA~Alg~~A 125 (258)
T PRK09183 100 RNENIVLLGPSGVGKTHLAIALGYEA 125 (258)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 58867998999986899999999999