HHsearch alignment for GI: 254780829 and conserved domain: PRK11034

Probab=97.67  E-value=6.9e-05  Score=51.11  Aligned_cols=99  Identities=23%  Similarity=0.354  Sum_probs=54.0

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH---CCCEE-------EEECCCEE-ECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             66866996798886899999999970---78779-------71434101-212234310134678887652127899856
Q gi|254780829|r   52 MPKNILLVGPTGVGKTAISRRLARLA---GAPFI-------KVEVTKFT-EIGYVGRNVEQIIRDLVDVAINIVRESRRD  120 (437)
Q Consensus        52 ~psNiLLiGPtGtGKTlLAktLA~~l---~VPF~-------~~daT~ft-E~gyvG~DVes~i~~l~~~a~~~~~~a~~~  120 (437)
T Consensus       206 ~KNNpiLvGepGVGKTAIvEGLA~rI~~g~VP~~L~~~~i~~Ldl~~LiAGtkyRG-efEeRlk~vi~e~~~---~~~~I  281 (758)
T PRK11034        206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG-DFEKRFKALLKQLEQ---DTNSI  281 (758)
T ss_pred             CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCH-HHHHHHHHHHHHHHH---CCCEE
T ss_conf             25896021699986999999999999738997655898899845877861686415-499999999999985---79859


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             549888868887555531143211004668988986168
Q gi|254780829|r  121 EVREQASINAEERILDALVGKTATSNTREVFRKKLRDGE  159 (437)
Q Consensus       121 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  159 (437)
T Consensus       282 LFIDEiH-----~ivGaG~~~gg~~DaaNlLKP~LarG~  315 (758)
T PRK11034        282 LFIDEIH-----TIIGAGAASGGQVDAANLIKPLLSSGK  315 (758)
T ss_pred             EEEECHH-----HHCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf             9980434-----422688767776467887457874697