HHsearch alignment for GI: 254780829 and conserved domain: PRK11308
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional.
Probab=95.72 E-value=0.0048 Score=39.17 Aligned_cols=43 Identities=28% Similarity=0.536 Sum_probs=27.8
Q ss_pred CCCCC-CEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCHH
Q ss_conf 65668-6699679888689999999997078779714341012122343101
Q gi|254780829|r 50 ELMPK-NILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNVE 100 (437)
Q Consensus 50 e~~ps-NiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG~DVe 100 (437)
T Consensus 37 ~i~~GE~lgiVGeSGsGKSTL~~~l~gl~~-p---~~----G~I~~~G~dl~ 80 (327)
T PRK11308 37 NLERGKTLAVVGESGCGKSTLARLLTMIET-P---TG----GELYYQGQDLL 80 (327)
T ss_pred EECCCCEEEEECCCCHHHHHHHHHHHCCCC-C---CC----CEEEECCEECC
T ss_conf 988999999999983199999999956999-8---86----37998999557