HHsearch alignment for GI: 254780829 and conserved domain: PRK11388

>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional.

Probab=97.63  E-value=0.00011  Score=49.87  Aligned_cols=40  Identities=30%  Similarity=0.515  Sum_probs=34.0

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHH---HCCCEEEEECCCEEEC
Q ss_conf             686699679888689999999997---0787797143410121
Q gi|254780829|r   53 PKNILLVGPTGVGKTAISRRLARL---AGAPFIKVEVTKFTEI   92 (437)
Q Consensus        53 psNiLLiGPtGtGKTlLAktLA~~---l~VPF~~~daT~ftE~   92 (437)
T Consensus       348 ~~pVLI~GE~GtGKe~lAraIH~~S~r~~~pfv~vnC~ai~~~  390 (639)
T PRK11388        348 SFPILLCGEEGVGKALLAQAIHNESERAAGPYIAVNCQLLPDE  390 (639)
T ss_pred             CCCEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHH
T ss_conf             9968988989810999999999557778998189878989846