HHsearch alignment for GI: 254780829 and conserved domain: PRK12402
>PRK12402 replication factor C small subunit 2; Reviewed.
Probab=98.68 E-value=4.4e-08 Score=71.84 Aligned_cols=47 Identities=32% Similarity=0.497 Sum_probs=38.0
Q ss_pred EECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 0486899999999998778864086444466566866996798886899999999970787
Q gi|254780829|r 20 IIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAP 80 (437)
Q Consensus 20 VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VP 80 (437)
T Consensus 17 vvGq~~i~~~L~~~~~~-------------~~~p-hlLf~GPpG~GKTt~A~~lA~~l~~~ 63 (337)
T PRK12402 17 ILGQESVVDHLSALAAS-------------GNLP-HLVVYGPSGSGKTAAVRALARELYGD 63 (337)
T ss_pred HCCCHHHHHHHHHHHHC-------------CCCC-EEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 03979999999999977-------------9987-69888929848999999999996799