HHsearch alignment for GI: 254780829 and conserved domain: PRK12402

>PRK12402 replication factor C small subunit 2; Reviewed.
Probab=98.68  E-value=4.4e-08  Score=71.84  Aligned_cols=47  Identities=32%  Similarity=0.497  Sum_probs=38.0

Q ss_pred             EECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf             0486899999999998778864086444466566866996798886899999999970787
Q gi|254780829|r   20 IIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLAGAP   80 (437)
Q Consensus        20 VvGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VP   80 (437)
T Consensus        17 vvGq~~i~~~L~~~~~~-------------~~~p-hlLf~GPpG~GKTt~A~~lA~~l~~~   63 (337)
T PRK12402         17 ILGQESVVDHLSALAAS-------------GNLP-HLVVYGPSGSGKTAAVRALARELYGD   63 (337)
T ss_pred             HCCCHHHHHHHHHHHHC-------------CCCC-EEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf             03979999999999977-------------9987-69888929848999999999996799