HHsearch alignment for GI: 254780829 and conserved domain: PRK13851
>PRK13851 type IV secretion system protein VirB11; Provisional.
Probab=97.09 E-value=0.00046 Score=45.77 Aligned_cols=26 Identities=42% Similarity=0.615 Sum_probs=23.6
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 66866996798886899999999970
Q gi|254780829|r 52 MPKNILLVGPTGVGKTAISRRLARLA 77 (437)
Q Consensus 52 ~psNiLLiGPtGtGKTlLAktLA~~l 77 (437)
T Consensus 161 ~r~NIlIsGgTGSGKTTllnALl~~I 186 (343)
T PRK13851 161 GRLTMLLCGPTGSGKTTMSKTLISAI 186 (343)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHCC
T ss_conf 69889998889861999999999628