HHsearch alignment for GI: 254780829 and conserved domain: PRK13851

>PRK13851 type IV secretion system protein VirB11; Provisional.
Probab=97.09  E-value=0.00046  Score=45.77  Aligned_cols=26  Identities=42%  Similarity=0.615  Sum_probs=23.6

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             66866996798886899999999970
Q gi|254780829|r   52 MPKNILLVGPTGVGKTAISRRLARLA   77 (437)
Q Consensus        52 ~psNiLLiGPtGtGKTlLAktLA~~l   77 (437)
T Consensus       161 ~r~NIlIsGgTGSGKTTllnALl~~I  186 (343)
T PRK13851        161 GRLTMLLCGPTGSGKTTMSKTLISAI  186 (343)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHCC
T ss_conf             69889998889861999999999628