HHsearch alignment for GI: 254780829 and conserved domain: PRK13946
>PRK13946 shikimate kinase; Provisional.
Probab=98.27 E-value=1e-06 Score=62.95 Aligned_cols=40 Identities=38% Similarity=0.764 Sum_probs=35.4
Q ss_pred CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf 4466566866996798886899999999970787797143
Q gi|254780829|r 47 LRDELMPKNILLVGPTGVGKTAISRRLARLAGAPFIKVEV 86 (437)
Q Consensus 47 ~~~e~~psNiLLiGPtGtGKTlLAktLA~~l~VPF~~~da 86 (437)
T Consensus 14 ~~~~l~kknIvLIG~mGsGKStvGk~LA~~L~~~fiD~D~ 53 (195)
T PRK13946 14 IRAALGKRTVVLVGLMGAGKSTVGRRLATMLGLPFLDADT 53 (195)
T ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEECHH
T ss_conf 9998589958998999998899999999997979898859