HHsearch alignment for GI: 254780829 and conserved domain: TIGR00174
>TIGR00174 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro: IPR002627 tRNA isopentenyltransferases 2.5.1.8 from EC also known as tRNA delta(2)-isopentenylpyrophosphate transferases or IPP transferases. These enzymes modify both cytoplasmic and mitochondrial tRNAs at A(37) to give isopentenyl A(37) .; GO: 0004811 tRNA isopentenyltransferase activity, 0005524 ATP binding, 0008033 tRNA processing.
Probab=96.81 E-value=0.0012 Score=43.12 Aligned_cols=55 Identities=31% Similarity=0.522 Sum_probs=40.2
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCC----------CCHHHHHHHHHHHHHHHH
Q ss_conf 69967988868999999999707877971434101212234----------310134678887652127
Q gi|254780829|r 56 ILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVG----------RNVEQIIRDLVDVAINIV 114 (437)
Q Consensus 56 iLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG----------~DVes~i~~l~~~a~~~~ 114 (437)
T Consensus 2 i~i~GpTAvGKs~L~i~La~~lnaEiI~~DS~qi----YK~~dIgtaKp~~~e~~~ipH~l~Dildp~e 66 (307)
T TIGR00174 2 IVIMGPTAVGKSNLAIQLAKKLNAEIISVDSMQI----YKGMDIGTAKPSLQERKGIPHHLIDILDPSE 66 (307)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHH----HCCCCCCCCCCCHHHHCCCCCEEEECCCCCC
T ss_conf 6774088554778999988768957874350232----2378753578896875349815851347120