HHsearch alignment for GI: 254780829 and conserved domain: TIGR02173
>TIGR02173 cyt_kin_arch cytidylate kinase, putative; InterPro: IPR011892 Proteins in this family are believed to be cytidylate kinase. Members of this family are found in the archaea and in spirochaetes, and differ considerably from the common bacterial form of cytidylate kinase described by IPR003136 from INTERPRO.; GO: 0004127 cytidylate kinase activity, 0005524 ATP binding, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=97.96 E-value=6.9e-06 Score=57.57 Aligned_cols=63 Identities=30% Similarity=0.412 Sum_probs=42.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6996798886899999999970787797143410121223431013467888765212789985654988886888755
Q gi|254780829|r 56 ILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQASINAEERI 134 (437)
Q Consensus 56 iLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG~DVes~i~~l~~~a~~~~~~a~~~i~~~~~~~~~~~~~ 134 (437)
T Consensus 3 I~ISGpPGSGktTvA~~lA~~Lsl~~iSa--------G--------~iRelA~~~Gldl~E~~~aee~~eIDk~iD~~~ 65 (173)
T TIGR02173 3 ITISGPPGSGKTTVAKILAEKLSLKLISA--------G--------DIRELAEKMGLDLAESKYAEENPEIDKKIDRRI 65 (173)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCEECC--------C--------HHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHH
T ss_conf 88735896864789999998639831202--------0--------078898642988777344305863116753788