HHsearch alignment for GI: 254780829 and conserved domain: TIGR02788

>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11; InterPro: IPR014155 This entry contains VirB11, a protein that is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer . VirB11 is believed to be an ATPase and is a homologue of the P-like conjugation system TrbB protein and the Flp pilus system protein TadA ..

Probab=95.79  E-value=0.0073  Score=37.96  Aligned_cols=26  Identities=38%  Similarity=0.558  Sum_probs=23.0

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             66866996798886899999999970
Q gi|254780829|r   52 MPKNILLVGPTGVGKTAISRRLARLA   77 (437)
Q Consensus        52 ~psNiLLiGPtGtGKTlLAktLA~~l   77 (437)
T Consensus       157 ~~knIii~GGTgSGKTTf~kal~~~I  182 (328)
T TIGR02788       157 SRKNIIISGGTGSGKTTFLKALVKEI  182 (328)
T ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCC
T ss_conf             38919999068971899999997327