HHsearch alignment for GI: 254780829 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=99.21 E-value=4e-11 Score=91.55 Aligned_cols=62 Identities=40% Similarity=0.612 Sum_probs=51.5
Q ss_pred ECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH---CCCEEEEECCCEEECCCCC
Q ss_conf 486899999999998778864086444466566866996798886899999999970---7877971434101212234
Q gi|254780829|r 21 IGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVGKTAISRRLARLA---GAPFIKVEVTKFTEIGYVG 96 (437)
Q Consensus 21 vGQ~~AKk~lavav~nhy~R~~~~~~~~~e~~psNiLLiGPtGtGKTlLAktLA~~l---~VPF~~~daT~ftE~gyvG 96 (437)
T Consensus 1 ~~~~~~~~~l~~~~~~~--------------~~~~ill~GppGtGKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (151)
T cd00009 1 VGQEEAIEALREALELP--------------PPKNLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNASDLLEGLVVA 65 (151)
T ss_pred CCCHHHHHHHHHHHHCC--------------CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHH
T ss_conf 98579999999998187--------------998089989999886599999999712137982785477704677775