HHsearch alignment for GI: 254780829 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=96.42 E-value=0.0023 Score=41.15 Aligned_cols=29 Identities=41% Similarity=0.740 Sum_probs=23.4
Q ss_pred CCCCC-CEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 65668-669967988868999999999707
Q gi|254780829|r 50 ELMPK-NILLVGPTGVGKTAISRRLARLAG 78 (437)
Q Consensus 50 e~~ps-NiLLiGPtGtGKTlLAktLA~~l~ 78 (437)
T Consensus 23 ~i~~Ge~v~i~G~sGsGKSTLl~~l~Gl~~ 52 (166)
T cd03223 23 EIKPGDRLLITGPSGTGKSSLFRALAGLWP 52 (166)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 988999999995899988999999869876